/users/218819/scratch/projects/HantaVirus/PhaME/results/Hantaan_virus_JS12_norepeats.fna /users/218819/scratch/projects/HantaVirus/PhaME/results/Hantaan_virus_Galkino_AA57_2002_norepeats.fna
NUCMER

[S1]	[E1]	[S2]	[E2]	[LEN 1]	[LEN 2]	[% IDY]	[LEN R]	[LEN Q]	[COV R]	[COV Q]	[TAGS]
22	11823	7	11738	11802	11732	87.61	11843	11738	99.65	99.95	Hantaan_virus_JS12_1_11843	Hantaan_virus_Galkino_AA57_2002_1_11738