##gff-version 3
#!gff-spec-version 1.20
#!processor NCBI annotwriter
##sequence-region NC_003143.1 1 4653728
##species http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=214092
NC_003143.1	RefSeq	region	1	4653728	.	+	.	ID=id0;Name=ANONYMOUS;Dbxref=taxon:214092;Is_circular=true;biovar=Orientalis;gbkey=Src;genome=chromosome;mol_type=genomic DNA;strain=CO92
NC_003143.1	RefSeq	gene	271	711	.	-	.	ID=gene0;Name=YPO0001;Dbxref=GeneID:1172846;gbkey=Gene;locus_tag=YPO0001
NC_003143.1	RefSeq	CDS	271	711	.	-	0	ID=cds0;Name=YP_002345097.1;Parent=gene0;Note=An electron-transfer protein%3B flavodoxin binds one FMN molecule%2C which serves as a redox-active prosthetic group;Dbxref=InterPro:IPR001094,InterPro:IPR008254,UniProtKB%2FTrEMBL:Q7CLF0,Genbank:YP_002345097.1,GeneID:1172846;gbkey=CDS;product=flavodoxin;protein_id=YP_002345097.1;transl_table=11
NC_003143.1	RefSeq	gene	804	1265	.	-	.	ID=gene1;Name=asnC;Dbxref=GeneID:1172849;gbkey=Gene;gene=asnC;locus_tag=YPO0002
NC_003143.1	RefSeq	CDS	804	1265	.	-	0	ID=cds1;Name=YP_002345098.1;Parent=gene1;Note=transcriptional repressor of asnA which codes for aspartate-ammonia ligase;Dbxref=InterPro:IPR000485,InterPro:IPR002197,InterPro:IPR011008,InterPro:IPR011991,UniProtKB%2FTrEMBL:Q7CLE9,Genbank:YP_002345098.1,GeneID:1172849;gbkey=CDS;gene=asnC;product=DNA-binding transcriptional regulator AsnC;protein_id=YP_002345098.1;transl_table=11
NC_003143.1	RefSeq	region	1113	1193	.	-	.	ID=id1;Note=PS00519 Bacterial regulatory proteins%2C asnC family signature.;Dbxref=GeneID:1172849;gbkey=misc_feature;gene=asnC
NC_003143.1	RefSeq	region	1131	1196	.	-	.	ID=id2;Note=Predicted helix-turn-helix motif with score 1363 %28%2B3.83 SD%29 at aa 6-27%2C sequence TPYAELAKNLAVSPGTIHVRVE;Dbxref=GeneID:1172849;gbkey=misc_feature;gene=asnC
NC_003143.1	RefSeq	gene	1435	2427	.	+	.	ID=gene2;Name=asnA;Dbxref=GeneID:1172850;gbkey=Gene;gene=asnA;locus_tag=YPO0003
NC_003143.1	RefSeq	CDS	1435	2427	.	+	0	ID=cds2;Name=YP_002345099.1;Parent=gene2;Note=catalyzes the formation of asparagine from aspartate and ammonia;Dbxref=InterPro:IPR004618,InterPro:IPR006195,UniProtKB%2FTrEMBL:Q0WKT9,Genbank:YP_002345099.1,GeneID:1172850;gbkey=CDS;gene=asnA;product=asparagine synthetase AsnA;protein_id=YP_002345099.1;transl_table=11
NC_003143.1	RefSeq	gene	2526	3992	.	-	.	ID=gene3;Name=yieM;Dbxref=GeneID:1172847;gbkey=Gene;gene=yieM;locus_tag=YPO0004
NC_003143.1	RefSeq	CDS	2526	3992	.	-	0	ID=cds3;Name=YP_002345100.1;Parent=gene3;Note=contains a von Willibrand factor type A domain%3B stimulates the ATPase activity of RavA;Dbxref=InterPro:IPR002035,UniProtKB%2FTrEMBL:Q0WKT8,Genbank:YP_002345100.1,GeneID:1172847;gbkey=CDS;gene=yieM;product=hypothetical protein;protein_id=YP_002345100.1;transl_table=11
NC_003143.1	RefSeq	gene	3996	5549	.	-	.	ID=gene4;Name=YPO0005;Dbxref=GeneID:1172848;gbkey=Gene;locus_tag=YPO0005
NC_003143.1	RefSeq	CDS	3996	5549	.	-	0	ID=cds4;Name=YP_002345101.1;Parent=gene4;Note=interacts with LdcI%2C lysine decarboxylase%3B may be active in late log%2F early stationary phase;Dbxref=InterPro:IPR001270,InterPro:IPR003593,InterPro:IPR011704,UniProtKB%2FTrEMBL:Q0WKT7,Genbank:YP_002345101.1,GeneID:1172848;gbkey=CDS;product=regulatory ATPase RavA;protein_id=YP_002345101.1;transl_table=11
NC_003143.1	RefSeq	gene	5823	7691	.	+	.	ID=gene5;Name=trkD;Dbxref=GeneID:1172851;gbkey=Gene;gene=trkD;locus_tag=YPO0006
NC_003143.1	RefSeq	CDS	5823	7691	.	+	0	ID=cds5;Name=YP_002345102.1;Parent=gene5;Note=Responsible for the low-affinity transport of potassium into the cell%3B involved in potassium ion uptake under hyper-osmotic stress at a low pH;Dbxref=InterPro:IPR003855,UniProtKB%2FTrEMBL:Q0WKT6,Genbank:YP_002345102.1,GeneID:1172851;gbkey=CDS;gene=trkD;product=potassium transport protein Kup;protein_id=YP_002345102.1;transl_table=11
NC_003143.1	RefSeq	gene	7896	8315	.	+	.	ID=gene6;Name=YPO0007;Dbxref=GeneID:1172852;gbkey=Gene;locus_tag=YPO0007
NC_003143.1	RefSeq	CDS	7896	8315	.	+	0	ID=cds6;Name=YP_002345103.1;Parent=gene6;Note=cytoplasmic mutarotase that catalyzes the conversion between beta-pyran and beta-furan forms of D-ribose%3B RbsD is required for efficient ribose utilization in E. coli%3B rbsD-mutant E. coli strains are unable to use ribose as a sole carbon source;Dbxref=InterPro:IPR007721,UniProtKB%2FTrEMBL:Q7CLE5,Genbank:YP_002345103.1,GeneID:1172852;gbkey=CDS;product=D-ribose pyranase;protein_id=YP_002345103.1;transl_table=11
NC_003143.1	RefSeq	gene	8366	9292	.	+	.	ID=gene7;Name=rbsK;Dbxref=GeneID:1172853;gbkey=Gene;gene=rbsK;locus_tag=YPO0008
NC_003143.1	RefSeq	CDS	8366	9292	.	+	0	ID=cds7;Name=YP_002345104.1;Parent=gene7;Note=catalyzes the formation of D-ribose 5-phosphate from ribose;Dbxref=InterPro:IPR002139,InterPro:IPR002173,InterPro:IPR011611,InterPro:IPR011877,UniProtKB%2FTrEMBL:Q7CLE4,Genbank:YP_002345104.1,GeneID:1172853;gbkey=CDS;gene=rbsK;product=ribokinase;protein_id=YP_002345104.1;transl_table=11
NC_003143.1	RefSeq	region	8483	8557	.	+	.	ID=id3;Note=PS00583 pfkB family of carbohydrate kinases signature 1.;Dbxref=GeneID:1172853;gbkey=misc_feature;gene=rbsK
NC_003143.1	RefSeq	region	9107	9148	.	+	.	ID=id4;Note=PS00584 pfkB family of carbohydrate kinases signature 2.;Dbxref=GeneID:1172853;gbkey=misc_feature;gene=rbsK
NC_003143.1	RefSeq	gene	9512	10936	.	-	.	ID=gene8;Name=YPO0009;Dbxref=GeneID:1172854;gbkey=Gene;locus_tag=YPO0009
NC_003143.1	RefSeq	CDS	9512	10936	.	-	0	ID=cds8;Name=YP_002345105.1;Parent=gene8;Dbxref=InterPro:IPR001411,InterPro:IPR007114,InterPro:IPR011701,UniProtKB%2FTrEMBL:Q7CLE3,Genbank:YP_002345105.1,GeneID:1172854;gbkey=CDS;product=membrane transport protein;protein_id=YP_002345105.1;transl_table=11
NC_003143.1	RefSeq	gene	11016	11705	.	-	.	ID=gene9;Name=YPO0010;Dbxref=GeneID:1172855;gbkey=Gene;locus_tag=YPO0010
NC_003143.1	RefSeq	CDS	11016	11705	.	-	0	ID=cds9;Name=YP_002345106.1;Parent=gene9;Dbxref=InterPro:IPR000524,InterPro:IPR011711,UniProtKB%2FTrEMBL:Q7CLE2,Genbank:YP_002345106.1,GeneID:1172855;gbkey=CDS;product=GntR family transcriptional regulator;protein_id=YP_002345106.1;transl_table=11
NC_003143.1	RefSeq	region	11523	11597	.	-	.	ID=id5;Note=PS00043 Bacterial regulatory proteins%2C gntR family signature.;Dbxref=GeneID:1172855;gbkey=misc_feature
NC_003143.1	RefSeq	region	11529	11594	.	-	.	ID=id6;Note=Predicted helix-turn-helix motif with score 1101 %28%2B2.94 SD%29 at aa 38-59%2C sequence PGEIELGEQFGVSRTAVREAVK;Dbxref=GeneID:1172855;gbkey=misc_feature
NC_003143.1	RefSeq	gene	12074	12259	.	-	.	ID=gene10;Name=YPO0010a;Dbxref=GeneID:16744735;gbkey=Gene;locus_tag=YPO0010a
NC_003143.1	RefSeq	CDS	12074	12259	.	-	0	ID=cds10;Name=YP_008479675.1;Parent=gene10;Dbxref=Genbank:YP_008479675.1,GeneID:16744735;gbkey=CDS;product=hypothetical protein;protein_id=YP_008479675.1;transl_table=11
NC_003143.1	RefSeq	gene	12292	13763	.	+	.	ID=gene11;Name=YPOr01;Dbxref=GeneID:1172856;gbkey=Gene;locus_tag=YPOr01
NC_003143.1	RefSeq	rRNA	12292	13763	.	+	.	ID=rna0;Parent=gene11;Note=match to 16S_rRNA 1..1472  %28EMBL:YPE16SA%29;Dbxref=GeneID:1172856;gbkey=rRNA;product=16S ribosomal RNA
NC_003143.1	RefSeq	exon	12292	13763	.	+	.	ID=id7;Parent=rna0;Note=match to 16S_rRNA 1..1472  %28EMBL:YPE16SA%29;Dbxref=GeneID:1172856;gbkey=rRNA;product=16S ribosomal RNA
NC_003143.1	RefSeq	gene	13944	14019	.	+	.	ID=gene12;Name=YPt_01;Dbxref=GeneID:1172857;gbkey=Gene;locus_tag=YPt_01
NC_003143.1	RefSeq	tRNA	13944	14019	.	+	.	ID=rna1;Parent=gene12;Note=tRNA Glu anticodon TTC%2C Cove score 56.95;Dbxref=GeneID:1172857;gbkey=tRNA;product=tRNA-Glu
NC_003143.1	RefSeq	exon	13944	14019	.	+	.	ID=id8;Parent=rna1;Note=tRNA Glu anticodon TTC%2C Cove score 56.95;Dbxref=GeneID:1172857;gbkey=tRNA;product=tRNA-Glu
NC_003143.1	RefSeq	gene	14272	17178	.	+	.	ID=gene13;Name=YPOr02;Dbxref=GeneID:1172858;gbkey=Gene;locus_tag=YPOr02
NC_003143.1	RefSeq	rRNA	14272	17178	.	+	.	ID=rna2;Parent=gene13;Note=match to 23S_rRNA 1..2906  %7E96 %25 ID  U77925 %28Y. enterocolitica 23S%29;Dbxref=GeneID:1172858;gbkey=rRNA;product=23S ribosomal RNA
NC_003143.1	RefSeq	exon	14272	17178	.	+	.	ID=id9;Parent=rna2;Note=match to 23S_rRNA 1..2906  %7E96 %25 ID  U77925 %28Y. enterocolitica 23S%29;Dbxref=GeneID:1172858;gbkey=rRNA;product=23S ribosomal RNA
NC_003143.1	RefSeq	gene	17288	17403	.	+	.	ID=gene14;Name=YPOr03;Dbxref=GeneID:1172859;gbkey=Gene;locus_tag=YPOr03
NC_003143.1	RefSeq	rRNA	17288	17403	.	+	.	ID=rna3;Parent=gene14;Note=match to 5SrRNA 1..234  blast score 1149  percent identity 99  %28incl. 23S-5S spacer%29;Dbxref=GeneID:1172859;gbkey=rRNA;product=5S ribosomal RNA
NC_003143.1	RefSeq	exon	17288	17403	.	+	.	ID=id10;Parent=rna3;Note=match to 5SrRNA 1..234  blast score 1149  percent identity 99  %28incl. 23S-5S spacer%29;Dbxref=GeneID:1172859;gbkey=rRNA;product=5S ribosomal RNA
NC_003143.1	RefSeq	repeat_region	17835	19149	.	+	.	ID=id11;Note=insertion sequence:IS285;gbkey=repeat_region
NC_003143.1	RefSeq	repeat_region	17835	17863	.	+	.	ID=id12;Note=IS285 inverted repeat;gbkey=repeat_region
NC_003143.1	RefSeq	gene	17906	19114	.	+	.	ID=gene15;Name=YPO0011;Note=y1062%3B ypmt1.80C;Dbxref=GeneID:1172860;gbkey=Gene;locus_tag=YPO0011
NC_003143.1	RefSeq	CDS	17906	19114	.	+	0	ID=cds11;Name=YP_002345107.1;Parent=gene15;Dbxref=InterPro:IPR001207,UniProtKB%2FTrEMBL:Q7ARB0,Genbank:YP_002345107.1,GeneID:1172860;gbkey=CDS;product=transposase for the IS285 insertion element;protein_id=YP_002345107.1;transl_table=11
NC_003143.1	RefSeq	region	18599	18673	.	+	.	ID=id13;Note=PS01007 Transposases%2C Mutator family%2C signature.;Dbxref=GeneID:1172860;gbkey=misc_feature
NC_003143.1	RefSeq	repeat_region	19121	19149	.	-	.	ID=id14;Note=IS285 inverted repeat;gbkey=repeat_region
NC_003143.1	RefSeq	gene	19172	19702	.	-	.	ID=gene16;Name=mobB;Dbxref=GeneID:1172861;gbkey=Gene;gene=mobB;locus_tag=YPO0012
NC_003143.1	RefSeq	CDS	19172	19702	.	-	0	ID=cds12;Name=YP_002345108.1;Parent=gene16;Note=in Escherichia coli the MobB protein is not essential but has been found to interact with multiple proteins involved in the molybdopterin guanine dinucleotide cofactor biosynthesis pathway;Dbxref=InterPro:IPR004435,InterPro:IPR012249,UniProtKB%2FTrEMBL:Q0WKT0,Genbank:YP_002345108.1,GeneID:1172861;gbkey=CDS;gene=mobB;product=molybdopterin-guanine dinucleotide biosynthesis protein B;protein_id=YP_002345108.1;transl_table=11
NC_003143.1	RefSeq	region	19643	19666	.	-	.	ID=id15;Note=PS00017 ATP%2FGTP-binding site motif A %28P-loop%29.;Dbxref=GeneID:1172861;gbkey=misc_feature;gene=mobB
NC_003143.1	RefSeq	gene	19702	20343	.	-	.	ID=gene17;Name=mobA;Dbxref=GeneID:1172862;gbkey=Gene;gene=mobA;gene_synonym=mob,mobA,nar;locus_tag=YPO0013
NC_003143.1	RefSeq	CDS	19702	20343	.	-	0	ID=cds13;Name=YP_002345109.1;Parent=gene17;Note=in Escherichia coli MobA links a guanosine 5%27-phosphate to molydopterin to form molybdopterin guanine dinucleotide during molybdenum cofactor biosynthesis;Dbxref=InterPro:IPR013482,UniProtKB%2FTrEMBL:Q0WKS9,Genbank:YP_002345109.1,GeneID:1172862;gbkey=CDS;gene=mobA;product=molybdopterin-guanine dinucleotide biosynthesis protein MobA;protein_id=YP_002345109.1;transl_table=11
NC_003143.1	RefSeq	gene	20443	20712	.	+	.	ID=gene18;Name=YPO0013a;Dbxref=GeneID:1172863;gbkey=Gene;locus_tag=YPO0013a
NC_003143.1	RefSeq	CDS	20443	20712	.	+	0	ID=cds14;Name=YP_002345110.1;Parent=gene18;Dbxref=InterPro:IPR009383,UniProtKB%2FTrEMBL:Q7CG24,Genbank:YP_002345110.1,GeneID:1172863;gbkey=CDS;product=hypothetical protein;protein_id=YP_002345110.1;transl_table=11
NC_003143.1	RefSeq	gene	20792	21778	.	+	.	ID=gene19;Name=YPO0014;Dbxref=GeneID:1172864;gbkey=Gene;locus_tag=YPO0014
NC_003143.1	RefSeq	CDS	20792	21778	.	+	0	ID=cds15;Name=YP_002345111.1;Parent=gene19;Note=catalyzes the phosphorylation of protein substrates at serine and threonine residues in vitro%3B specific substrate in vivo has not been identified yet%3B plays a role in long-term cell survival and expression of surface appendages;Dbxref=InterPro:IPR002575,InterPro:IPR011009,UniProtKB%2FTrEMBL:Q7CG25,Genbank:YP_002345111.1,GeneID:1172864;gbkey=CDS;product=serine%2Fthreonine protein kinase;protein_id=YP_002345111.1;transl_table=11
NC_003143.1	RefSeq	gene	21806	22429	.	+	.	ID=gene20;Name=dsbA;Dbxref=GeneID:1172865;gbkey=Gene;gene=dsbA;locus_tag=YPO0015
NC_003143.1	RefSeq	CDS	21806	22429	.	+	0	ID=cds16;Name=YP_002345112.1;Parent=gene20;Dbxref=InterPro:IPR001853,InterPro:IPR006662,InterPro:IPR010986,InterPro:IPR012335,InterPro:IPR012336,UniProtKB%2FTrEMBL:Q0WKS6,Genbank:YP_002345112.1,GeneID:1172865;gbkey=CDS;gene=dsbA;product=periplasmic protein disulfide isomerase I;protein_id=YP_002345112.1;transl_table=11
NC_003143.1	RefSeq	region	21818	21871	.	+	.	ID=id16;Note=1 probable transmembrane helix predicted;Dbxref=GeneID:1172865;gbkey=misc_feature;gene=dsbA
NC_003143.1	RefSeq	region	21926	21982	.	+	.	ID=id17;Note=PS00194 Thioredoxin family active site.;Dbxref=GeneID:1172865;gbkey=misc_feature;gene=dsbA
NC_003143.1	RefSeq	gene	22921	25719	.	+	.	ID=gene21;Name=polA;Dbxref=GeneID:1172866;gbkey=Gene;gene=polA;gene_synonym=resA;locus_tag=YPO0017
NC_003143.1	RefSeq	CDS	22921	25719	.	+	0	ID=cds17;Name=YP_002345113.1;Parent=gene21;Note=has 3%27-5%27 exonuclease%2C 5%27-3%27 exonuclease and 5%27-3%27polymerase activities%2C primarily functions to fill gaps during DNA replication and repair;Dbxref=InterPro:IPR001098,InterPro:IPR002298,InterPro:IPR002421,InterPro:IPR002562,InterPro:IPR003583,InterPro:IPR008918,InterPro:IPR012337,UniProtKB%2FTrEMBL:Q7CG26,Genbank:YP_002345113.1,GeneID:1172866;gbkey=CDS;gene=polA;product=DNA polymerase I;protein_id=YP_002345113.1;transl_table=11
NC_003143.1	RefSeq	region	25189	25248	.	+	.	ID=id18;Note=PS00447 DNA polymerase family A signature.;Dbxref=GeneID:1172866;gbkey=misc_feature;gene=polA
NC_003143.1	RefSeq	gene	25879	25982	.	+	.	ID=gene22;Name=spf;Dbxref=GeneID:1172867;gbkey=Gene;gene=spf;locus_tag=YPOs01
NC_003143.1	RefSeq	ncRNA	25879	25982	.	+	.	ID=rna4;Parent=gene22;Note=RNA feature: spf Spot 42 RNA. Due to transposon insertion this feature is a single base shorter than the E. coli spf gene.;Dbxref=GeneID:1172867;gbkey=ncRNA;gene=spf;ncrna_class=other;product=hypothetical protein
NC_003143.1	RefSeq	exon	25879	25982	.	+	.	ID=id19;Parent=rna4;Note=RNA feature: spf Spot 42 RNA. Due to transposon insertion this feature is a single base shorter than the E. coli spf gene.;Dbxref=GeneID:1172867;gbkey=ncRNA;gene=spf;ncrna_class=other;product=hypothetical protein
NC_003143.1	RefSeq	repeat_region	25983	26694	.	+	.	ID=id20;Note=Contains a %27G%27 at nucleotide position 315%7EIS200-like insertion sequence:IS1541;gbkey=repeat_region
NC_003143.1	RefSeq	gene	26128	26586	.	+	.	ID=gene23;Name=tnp;Dbxref=GeneID:1172868;gbkey=Gene;gene=tnp;locus_tag=YPO0018
NC_003143.1	RefSeq	CDS	26128	26586	.	+	0	ID=cds18;Name=YP_002345114.1;Parent=gene23;Dbxref=InterPro:IPR002686,UniProtKB%2FTrEMBL:Q74YM6,Genbank:YP_002345114.1,GeneID:1172868;gbkey=CDS;gene=tnp;product=transposase for the IS1541 insertion element;protein_id=YP_002345114.1;transl_table=11
NC_003143.1	RefSeq	gene	26838	27488	.	-	.	ID=gene24;Name=engB;Dbxref=GeneID:1172869;gbkey=Gene;gene=engB;locus_tag=YPO0019
NC_003143.1	RefSeq	CDS	26838	27488	.	-	0	ID=cds19;Name=YP_002345115.1;Parent=gene24;Note=binds guanine nucleotides%3B in Escherichia coli depletion results in defective cell division and filamentation%3B in Bacillus subtilis this gene is essential;Dbxref=InterPro:IPR002917,InterPro:IPR005289,UniProtKB%2FTrEMBL:Q0WKS3,Genbank:YP_002345115.1,GeneID:1172869;gbkey=CDS;gene=engB;product=ribosome biogenesis GTP-binding protein YsxC;protein_id=YP_002345115.1;transl_table=11
NC_003143.1	RefSeq	region	27363	27386	.	-	.	ID=id21;Note=PS00017 ATP%2FGTP-binding site motif A %28P-loop%29.;Dbxref=GeneID:1172869;gbkey=misc_feature;gene=engB
NC_003143.1	RefSeq	gene	28233	28799	.	+	.	ID=gene25;Name=YPO0020;Dbxref=GeneID:1172870;gbkey=Gene;locus_tag=YPO0020
NC_003143.1	RefSeq	CDS	28233	28799	.	+	0	ID=cds20;Name=YP_002345116.1;Parent=gene25;Dbxref=InterPro:IPR007336,UniProtKB%2FTrEMBL:Q0WKS2,Genbank:YP_002345116.1,GeneID:1172870;gbkey=CDS;product=hypothetical protein;protein_id=YP_002345116.1;transl_table=11
NC_003143.1	RefSeq	gene	28982	30355	.	+	.	ID=gene26;Name=hemN;Dbxref=GeneID:1172871;gbkey=Gene;gene=hemN;locus_tag=YPO0021
NC_003143.1	RefSeq	CDS	28982	30355	.	+	0	ID=cds21;Name=YP_002345117.1;Parent=gene26;Note=catalyzes the oxygen-independent formation of protoporphyrinogen-IX from coproporphyrinogen-III;Dbxref=InterPro:IPR004558,InterPro:IPR006638,InterPro:IPR007197,InterPro:IPR010723,UniProtKB%2FTrEMBL:Q0WKS1,Genbank:YP_002345117.1,GeneID:1172871;gbkey=CDS;gene=hemN;product=coproporphyrinogen III oxidase;protein_id=YP_002345117.1;transl_table=11
NC_003143.1	RefSeq	gene	30409	31821	.	-	.	ID=gene27;Name=glnG;Dbxref=GeneID:1172872;gbkey=Gene;gene=glnG;gene_synonym=glnT,ntrC;locus_tag=YPO0022
NC_003143.1	RefSeq	CDS	30409	31821	.	-	0	ID=cds22;Name=YP_002345118.1;Parent=gene27;Note=response regulator of a two-component regulatory system involved in the activation of nitrogen assimilation genes%3B interacts with sigma-54;Dbxref=InterPro:IPR001789,InterPro:IPR002078,InterPro:IPR002197,InterPro:IPR003593,InterPro:IPR009057,InterPro:IPR010114,InterPro:IPR011006,InterPro:IPR012287,UniProtKB%2FTrEMBL:Q0WKS0,Genbank:YP_002345118.1,GeneID:1172872;gbkey=CDS;gene=glnG;product=nitrogen regulation protein NR%28I%29;protein_id=YP_002345118.1;transl_table=11
NC_003143.1	RefSeq	region	30427	30492	.	-	.	ID=id22;Note=Predicted helix-turn-helix motif with score 1763 %28%2B5.19 SD%29 at aa 444-465%2C sequence GHKQEAARLLGWGRNTLTRKLK;Dbxref=GeneID:1172872;gbkey=misc_feature;gene=glnG
NC_003143.1	RefSeq	region	30733	30762	.	-	.	ID=id23;Note=PS00688 Sigma-54 interaction domain C-terminal part signature.;Dbxref=GeneID:1172872;gbkey=misc_feature;gene=glnG
NC_003143.1	RefSeq	region	31288	31329	.	-	.	ID=id24;Note=PS00675 Sigma-54 interaction domain ATP-binding region A signature.;Dbxref=GeneID:1172872;gbkey=misc_feature;gene=glnG
NC_003143.1	RefSeq	gene	31829	32878	.	-	.	ID=gene28;Name=glnL;Dbxref=GeneID:1172873;gbkey=Gene;gene=glnL;gene_synonym=glnl,ntrB;locus_tag=YPO0023
NC_003143.1	RefSeq	CDS	31829	32878	.	-	0	ID=cds23;Name=YP_002345119.1;Parent=gene28;Note=sensory histidine kinase in two-component regulatory system with GlnG%3B acts as a signal transducer which responds to the nitrogen level of cell and modulates the activity of ntrC by phosphorylation%2Fdephosphorylation;Dbxref=InterPro:IPR000014,InterPro:IPR003594,InterPro:IPR003661,InterPro:IPR004358,InterPro:IPR005467,InterPro:IPR009082,InterPro:IPR013656,UniProtKB%2FTrEMBL:Q0WKR9,Genbank:YP_002345119.1,GeneID:1172873;gbkey=CDS;gene=glnL;product=nitrogen regulation protein NR%28II%29;protein_id=YP_002345119.1;transl_table=11
NC_003143.1	RefSeq	gene	33131	34540	.	-	.	ID=gene29;Name=glnA;Dbxref=GeneID:1172874;gbkey=Gene;gene=glnA;locus_tag=YPO0024
NC_003143.1	RefSeq	CDS	33131	34540	.	-	0	ID=cds24;Name=YP_002345120.1;Parent=gene29;Note=forms a homododecamer%3B forms glutamine from ammonia and glutamate with the conversion of ATP to ADP and phosphate%3B also functions in the assimilation of ammonia%3B highly regulated protein controlled by the addition%2Fremoval of adenylyl groups by adenylyltransferase from specific tyrosine residues%3B addition of adenylyl groups results in inactivation of the enzyme;Dbxref=InterPro:IPR001637,InterPro:IPR004809,InterPro:IPR008146,InterPro:IPR008147,UniProtKB%2FTrEMBL:Q74YC3,Genbank:YP_002345120.1,GeneID:1172874;gbkey=CDS;gene=glnA;product=glutamine synthetase;protein_id=YP_002345120.1;transl_table=11
NC_003143.1	RefSeq	region	33347	33385	.	-	.	ID=id25;Note=PS00182 Glutamine synthetase class-I adenylation site.;Dbxref=GeneID:1172874;gbkey=misc_feature;gene=glnA
NC_003143.1	RefSeq	region	33719	33766	.	-	.	ID=id26;Note=PS00181 Glutamine synthetase  ATP-binding region signature.;Dbxref=GeneID:1172874;gbkey=misc_feature;gene=glnA
NC_003143.1	RefSeq	region	34337	34393	.	-	.	ID=id27;Note=PS00180 Glutamine synthetase signature 1.;Dbxref=GeneID:1172874;gbkey=misc_feature;gene=glnA
NC_003143.1	RefSeq	region	34783	34839	.	-	.	ID=id28;Note=1 probable transmembrane helix predicted;gbkey=misc_feature
NC_003143.1	RefSeq	gene	35102	36925	.	+	.	ID=gene30;Name=bipA;Dbxref=GeneID:1172876;gbkey=Gene;gene=bipA;gene_synonym=typA;locus_tag=YPO0026
NC_003143.1	RefSeq	CDS	35102	36925	.	+	0	ID=cds25;Name=YP_002345122.1;Parent=gene30;Dbxref=InterPro:IPR000640,InterPro:IPR000795,InterPro:IPR004161,InterPro:IPR005225,InterPro:IPR006298,InterPro:IPR009000,InterPro:IPR009022,UniProtKB%2FTrEMBL:Q7CG28,Genbank:YP_002345122.1,GeneID:1172876;gbkey=CDS;gene=bipA;product=GTPase;protein_id=YP_002345122.1;transl_table=11
NC_003143.1	RefSeq	region	35135	35158	.	+	.	ID=id29;Note=PS00017 ATP%2FGTP-binding site motif A %28P-loop%29.;Dbxref=GeneID:1172876;gbkey=misc_feature;gene=bipA
NC_003143.1	RefSeq	region	35231	35278	.	+	.	ID=id30;Note=PS00301 GTP-binding elongation factors signature.;Dbxref=GeneID:1172876;gbkey=misc_feature;gene=bipA
NC_003143.1	RefSeq	gene	37247	37837	.	+	.	ID=gene31;Name=YPO0027;Dbxref=GeneID:1172877;gbkey=Gene;locus_tag=YPO0027
NC_003143.1	RefSeq	CDS	37247	37837	.	+	0	ID=cds26;Name=YP_002345123.1;Parent=gene31;Dbxref=InterPro:IPR005834,InterPro:IPR006402,UniProtKB%2FTrEMBL:Q7CG29,Genbank:YP_002345123.1,GeneID:1172877;gbkey=CDS;product=phosphatase;protein_id=YP_002345123.1;transl_table=11
NC_003143.1	RefSeq	gene	37934	38818	.	+	.	ID=gene32;Name=rbn;Dbxref=GeneID:1172878;gbkey=Gene;gene=rbn;locus_tag=YPO0028
NC_003143.1	RefSeq	CDS	37934	38818	.	+	0	ID=cds27;Name=YP_002345124.1;Parent=gene32;Note=RNase BN%3B required for 3%27 maturation of certain phage T4-encoded tRNAs%3B forms a dimer%3B specific for immature tRNA substrates containing incorrect residues within the universal CCA sequence%3B 3%27 to 5%27 exoribonuclease;Dbxref=InterPro:IPR004664,UniProtKB%2FTrEMBL:Q0WKR4,Genbank:YP_002345124.1,GeneID:1172878;gbkey=CDS;gene=rbn;product=ribonuclease BN;protein_id=YP_002345124.1;transl_table=11
NC_003143.1	RefSeq	gene	38825	39262	.	+	.	ID=gene33;Name=YPO0029;Dbxref=GeneID:1172879;gbkey=Gene;locus_tag=YPO0029
NC_003143.1	RefSeq	CDS	38825	39262	.	+	0	ID=cds28;Name=YP_002345125.1;Parent=gene33;Note=hydrolyzes D-tyrosyl-tRNA%28Tyr%29 into D-tyrosine and free tRNA%28Tyr%29%3B possible defense mechanism against a harmful effect of D-tyrosine;Dbxref=InterPro:IPR003732,UniProtKB%2FTrEMBL:Q0WKR3,Genbank:YP_002345125.1,GeneID:1172879;gbkey=CDS;product=D-tyrosyl-tRNA%28Tyr%29 deacylase;protein_id=YP_002345125.1;transl_table=11
NC_003143.1	RefSeq	repeat_region	39270	41223	.	-	.	ID=id31;Note=insertion sequence:IS100;gbkey=repeat_region
NC_003143.1	RefSeq	repeat_region	39270	39297	.	+	.	ID=id32;Note=IS100 inverted repeat;gbkey=repeat_region
NC_003143.1	RefSeq	gene	39336	40118	.	-	.	ID=gene34;Name=YPO0030;Note=ypmt1.57c;Dbxref=GeneID:1172880;gbkey=Gene;locus_tag=YPO0030
NC_003143.1	RefSeq	CDS	39336	40118	.	-	0	ID=cds29;Name=YP_002345126.1;Parent=gene34;Dbxref=InterPro:IPR001270,InterPro:IPR002611,InterPro:IPR003593,UniProtKB%2FTrEMBL:Q7ARK4,Genbank:YP_002345126.1,GeneID:1172880;gbkey=CDS;product=transposase%2FIS protein;protein_id=YP_002345126.1;transl_table=11
NC_003143.1	RefSeq	region	39768	39791	.	-	.	ID=id33;Note=PS00017 ATP%2FGTP-binding site motif A %28P-loop%29.;Dbxref=GeneID:1172880;gbkey=misc_feature
NC_003143.1	RefSeq	gene	40115	41137	.	-	.	ID=gene35;Name=y1093;Dbxref=GeneID:1172881;gbkey=Gene;gene=y1093;gene_synonym=ypmt1;locus_tag=YPO0031
NC_003143.1	RefSeq	CDS	40115	41137	.	-	0	ID=cds30;Name=YP_002345127.1;Parent=gene35;Dbxref=InterPro:IPR001584,InterPro:IPR006120,InterPro:IPR009057,InterPro:IPR012287,InterPro:IPR012337,UniProtKB%2FTrEMBL:Q7ARN5,Genbank:YP_002345127.1,GeneID:1172881;gbkey=CDS;gene=y1093;product=transposase for insertion sequence IS100;protein_id=YP_002345127.1;transl_table=11
NC_003143.1	RefSeq	region	41021	41086	.	-	.	ID=id34;Note=Predicted helix-turn-helix motif with score 2147 %28%2B6.50 SD%29 at aa 18-39%2C sequence MSSRAIARELGISRNTVKRYLQ;Dbxref=GeneID:1172881;gbkey=misc_feature;gene=y1093
NC_003143.1	RefSeq	repeat_region	41196	41223	.	-	.	ID=id35;Note=IS100 inverted repeat;gbkey=repeat_region
NC_003143.1	RefSeq	gene	41407	42330	.	+	.	ID=gene36;Name=YPO0032;Dbxref=GeneID:1172882;gbkey=Gene;locus_tag=YPO0032
NC_003143.1	RefSeq	CDS	41407	42330	.	+	0	ID=cds31;Name=YP_002345128.1;Parent=gene36;Dbxref=InterPro:IPR000182,InterPro:IPR012660,UniProtKB%2FTrEMBL:Q7CLA6,Genbank:YP_002345128.1,GeneID:1172882;gbkey=CDS;product=hypothetical protein;protein_id=YP_002345128.1;transl_table=11
NC_003143.1	RefSeq	region	41677	41742	.	+	.	ID=id36;Note=Predicted helix-turn-helix motif with score 1005 %28%2B2.61 SD%29 at aa 91-112%2C sequence MTLESVARQEGVKRVVCSARED;Dbxref=GeneID:1172882;gbkey=misc_feature
NC_003143.1	RefSeq	region	42010	42078	.	+	.	ID=id37;Note=1 probable transmembrane helix predicted;Dbxref=GeneID:1172882;gbkey=misc_feature
NC_003143.1	RefSeq	gene	42465	44174	.	-	.	ID=gene37;Name=YPO0033;Dbxref=GeneID:1172883;gbkey=Gene;locus_tag=YPO0033
NC_003143.1	RefSeq	CDS	42465	44174	.	-	0	ID=cds32;Name=YP_002345129.1;Parent=gene37;Dbxref=InterPro:IPR007844,UniProtKB%2FTrEMBL:Q7CLA7,Genbank:YP_002345129.1,GeneID:1172883;gbkey=CDS;product=hypothetical protein;protein_id=YP_002345129.1;transl_table=11
NC_003143.1	RefSeq	region	44088	44153	.	-	.	ID=id38;Note=1 probable transmembrane helix predicted;Dbxref=GeneID:1172883;gbkey=misc_feature
NC_003143.1	RefSeq	gene	44322	45707	.	-	.	ID=gene38;Name=YPO0034;Dbxref=GeneID:1172884;gbkey=Gene;locus_tag=YPO0034
NC_003143.1	RefSeq	CDS	44322	45707	.	-	0	ID=cds33;Name=YP_002345130.1;Parent=gene38;Dbxref=InterPro:IPR006042,InterPro:IPR006043,UniProtKB%2FTrEMBL:Q0WKQ8,Genbank:YP_002345130.1,GeneID:1172884;gbkey=CDS;product=membrane permease;protein_id=YP_002345130.1;transl_table=11
NC_003143.1	RefSeq	region	44526	44588	.	-	.	ID=id39;Note=PS01116 Xanthine%2Furacil permeases family signature.;Dbxref=GeneID:1172884;gbkey=misc_feature
NC_003143.1	RefSeq	gene	45945	47159	.	+	.	ID=gene39;Name=gltC;Dbxref=GeneID:1172885;gbkey=Gene;gene=gltC;gene_synonym=gltS;locus_tag=YPO0035
NC_003143.1	RefSeq	CDS	45945	47159	.	+	0	ID=cds34;Name=YP_002345131.1;Parent=gene39;Dbxref=InterPro:IPR004445,UniProtKB%2FTrEMBL:Q7CLA8,Genbank:YP_002345131.1,GeneID:1172885;gbkey=CDS;gene=gltC;product=sodium%2Fglutamate symport carrier protein;protein_id=YP_002345131.1;transl_table=11
NC_003143.1	RefSeq	gene	47525	49606	.	-	.	ID=gene40;Name=recG;Dbxref=GeneID:1172886;gbkey=Gene;gene=recG;locus_tag=YPO0036
NC_003143.1	RefSeq	CDS	47525	49606	.	-	0	ID=cds35;Name=YP_002345132.1;Parent=gene40;Note=catalyzes branch migration in Holliday junction intermediates;Dbxref=InterPro:IPR001650,InterPro:IPR004365,InterPro:IPR004609,InterPro:IPR008994,InterPro:IPR011545,InterPro:IPR013817,InterPro:IPR014001,InterPro:IPR014021,UniProtKB%2FTrEMBL:Q7CLA9,Genbank:YP_002345132.1,GeneID:1172886;gbkey=CDS;gene=recG;product=ATP-dependent DNA helicase RecG;protein_id=YP_002345132.1;transl_table=11
NC_003143.1	RefSeq	region	48698	48721	.	-	.	ID=id40;Note=PS00017 ATP%2FGTP-binding site motif A %28P-loop%29.;Dbxref=GeneID:1172886;gbkey=misc_feature;gene=recG
NC_003143.1	RefSeq	gene	49607	50299	.	-	.	ID=gene41;Name=trmH;Dbxref=GeneID:1172887;gbkey=Gene;gene=trmH;locus_tag=YPO0037
NC_003143.1	RefSeq	CDS	49607	50299	.	-	0	ID=cds36;Name=YP_002345133.1;Parent=gene41;Note=specifically modifies tRNA at position G18;Dbxref=InterPro:IPR001537,UniProtKB%2FTrEMBL:Q7CLB0,Genbank:YP_002345133.1,GeneID:1172887;gbkey=CDS;gene=trmH;product=tRNA guanosine-2%27-O-methyltransferase;protein_id=YP_002345133.1;transl_table=11
NC_003143.1	RefSeq	gene	50305	52413	.	-	.	ID=gene42;Name=spoT;Dbxref=GeneID:1172888;gbkey=Gene;gene=spoT;locus_tag=YPO0038
NC_003143.1	RefSeq	CDS	50305	52413	.	-	0	ID=cds37;Name=YP_002345134.1;Parent=gene42;Dbxref=InterPro:IPR003607,InterPro:IPR004095,InterPro:IPR004811,InterPro:IPR006674,InterPro:IPR007685,InterPro:IPR012675,InterPro:IPR012676,UniProtKB%2FTrEMBL:Q7CLB1,Genbank:YP_002345134.1,GeneID:1172888;gbkey=CDS;gene=spoT;product=bifunctional %28p%29ppGpp synthetase II%2F guanosine-3%27%2C5%27-bis pyrophosphate 3%27-pyrophosphohydrolase;protein_id=YP_002345134.1;transl_table=11
NC_003143.1	RefSeq	gene	52433	52708	.	-	.	ID=gene43;Name=rpoZ;Dbxref=GeneID:1172889;gbkey=Gene;gene=rpoZ;locus_tag=YPO0039
NC_003143.1	RefSeq	CDS	52433	52708	.	-	0	ID=cds38;Name=YP_002345135.1;Parent=gene43;Note=promotes RNA polymerase assembly or stability%3B latches the N- and C-terminal regions of the beta%27 subunit thereby facilitating its interaction with the beta and alpha subunits;Dbxref=InterPro:IPR003716,InterPro:IPR006110,InterPro:IPR012293,UniProtKB%2FTrEMBL:Q0WKQ3,Genbank:YP_002345135.1,GeneID:1172889;gbkey=CDS;gene=rpoZ;product=DNA-directed RNA polymerase subunit omega;protein_id=YP_002345135.1;transl_table=11
NC_003143.1	RefSeq	gene	52763	53386	.	-	.	ID=gene44;Name=gmk;Dbxref=GeneID:1172890;gbkey=Gene;gene=gmk;gene_synonym=spoR;locus_tag=YPO0040
NC_003143.1	RefSeq	CDS	52763	53386	.	-	0	ID=cds39;Name=YP_002345136.1;Parent=gene44;Note=Essential for recycling GMP and indirectly%2C cGMP;Dbxref=InterPro:IPR008144,InterPro:IPR008145,UniProtKB%2FTrEMBL:Q0WKQ2,Genbank:YP_002345136.1,GeneID:1172890;gbkey=CDS;gene=gmk;product=guanylate kinase;protein_id=YP_002345136.1;transl_table=11
NC_003143.1	RefSeq	region	53216	53269	.	-	.	ID=id41;Note=PS00856 Guanylate kinase signature.;Dbxref=GeneID:1172890;gbkey=misc_feature;gene=gmk
NC_003143.1	RefSeq	region	53333	53356	.	-	.	ID=id42;Note=PS00017 ATP%2FGTP-binding site motif A %28P-loop%29.;Dbxref=GeneID:1172890;gbkey=misc_feature;gene=gmk
NC_003143.1	RefSeq	gene	53787	55490	.	+	.	ID=gene45;Name=ligB;Dbxref=GeneID:1172891;gbkey=Gene;gene=ligB;locus_tag=YPO0041
NC_003143.1	RefSeq	CDS	53787	55490	.	+	0	ID=cds40;Name=YP_002345137.1;Parent=gene45;Note=this ligase is similar to LigA but it lacks the C-terminal BRCT domain%3B catalyzes strand joining of nicked DNA in the presence of a divalent cation and NAD%2B;Dbxref=InterPro:IPR003583,InterPro:IPR004150,InterPro:IPR008994,InterPro:IPR010994,InterPro:IPR013839,InterPro:IPR013840,UniProtKB%2FTrEMBL:Q7CLB2,Genbank:YP_002345137.1,GeneID:1172891;gbkey=CDS;gene=ligB;product=NAD-dependent DNA ligase LigB;protein_id=YP_002345137.1;transl_table=11
NC_003143.1	RefSeq	region	53787	53855	.	+	.	ID=id43;Note=PS00430 TonB-dependent receptor proteins signature 1.;Dbxref=GeneID:1172891;gbkey=misc_feature;gene=ligB
NC_003143.1	RefSeq	region	55344	55409	.	+	.	ID=id44;Note=Predicted helix-turn-helix motif with score 1148 %28%2B3.10 SD%29 at aa 520-541%2C sequence RSLSEWATMAGIGQMRAKQIKH;Dbxref=GeneID:1172891;gbkey=misc_feature;gene=ligB
NC_003143.1	RefSeq	gene	55503	56126	.	-	.	ID=gene46;Name=YPO0042;Dbxref=GeneID:1172892;gbkey=Gene;locus_tag=YPO0042
NC_003143.1	RefSeq	CDS	55503	56126	.	-	0	ID=cds41;Name=YP_002345138.1;Parent=gene46;Dbxref=InterPro:IPR005115,UniProtKB%2FTrEMBL:Q7CLB3,Genbank:YP_002345138.1,GeneID:1172892;gbkey=CDS;product=hypothetical protein;protein_id=YP_002345138.1;transl_table=11
NC_003143.1	RefSeq	gene	56529	57392	.	-	.	ID=gene47;Name=YPO0043;Dbxref=GeneID:1172893;gbkey=Gene;locus_tag=YPO0043
NC_003143.1	RefSeq	CDS	56529	57392	.	-	0	ID=cds42;Name=YP_002345139.1;Parent=gene47;Dbxref=InterPro:IPR005229,InterPro:IPR013527,InterPro:IPR013551,UniProtKB%2FTrEMBL:Q7CLB4,Genbank:YP_002345139.1,GeneID:1172893;gbkey=CDS;product=hypothetical protein;protein_id=YP_002345139.1;transl_table=11
NC_003143.1	RefSeq	gene	57519	58235	.	+	.	ID=gene48;Name=rph;Dbxref=GeneID:1172894;gbkey=Gene;gene=rph;locus_tag=YPO0044
NC_003143.1	RefSeq	CDS	57519	58235	.	+	0	ID=cds43;Name=YP_002345140.1;Parent=gene48;Note=RNase PH%3B tRNA nucleotidyltransferase%3B forms hexamers in Bacillus subtilis%3B phosphoroltic 3%27-5%27 exoribonuclease%3B involved in maturation of tRNA precursors and removes terminal nucleotides near CCA acceptor arms of mature tRNAs;Dbxref=InterPro:IPR001247,InterPro:IPR002381,UniProtKB%2FTrEMBL:Q0WKP8,Genbank:YP_002345140.1,GeneID:1172894;gbkey=CDS;gene=rph;product=ribonuclease PH;protein_id=YP_002345140.1;transl_table=11
NC_003143.1	RefSeq	region	57864	57902	.	+	.	ID=id45;Note=PS01277 Ribonuclease PH signature.;Dbxref=GeneID:1172894;gbkey=misc_feature;gene=rph
NC_003143.1	RefSeq	gene	58402	59049	.	+	.	ID=gene49;Name=pyrE;Dbxref=GeneID:1172895;gbkey=Gene;gene=pyrE;locus_tag=YPO0045
NC_003143.1	RefSeq	CDS	58402	59049	.	+	0	ID=cds44;Name=YP_002345141.1;Parent=gene49;Note=involved in fifth step of pyrimidine biosynthesis%3B converts orotidine 5%27-phosphate and diphosphate to orotate and 5-phospho-alpha-D-ribose 1-diphosphate;Dbxref=InterPro:IPR000836,InterPro:IPR002375,InterPro:IPR004467,UniProtKB%2FTrEMBL:Q0WKP7,Genbank:YP_002345141.1,GeneID:1172895;gbkey=CDS;gene=pyrE;product=orotate phosphoribosyltransferase;protein_id=YP_002345141.1;transl_table=11
NC_003143.1	RefSeq	region	58759	58797	.	+	.	ID=id46;Note=PS00103 Purine%2Fpyrimidine phosphoribosyl transferases signature.;Dbxref=GeneID:1172895;gbkey=misc_feature;gene=pyrE
NC_003143.1	RefSeq	gene	59184	59780	.	-	.	ID=gene50;Name=slmA;Dbxref=GeneID:1172896;gbkey=Gene;gene=slmA;locus_tag=YPO0046
NC_003143.1	RefSeq	CDS	59184	59780	.	-	0	ID=cds45;Name=YP_002345142.1;Parent=gene50;Note=FtsZ binding protein%3B synthetically lethal with a defect in the Min system%3B this protein is the first identified nucleoid occlusion factor which works along with the Min system to properly position the FtsZ ring assembly;Dbxref=InterPro:IPR001647,InterPro:IPR009057,InterPro:IPR011075,InterPro:IPR012287,UniProtKB%2FTrEMBL:Q0WKP6,Genbank:YP_002345142.1,GeneID:1172896;gbkey=CDS;gene=slmA;product=nucleoid occlusion protein;protein_id=YP_002345142.1;transl_table=11
NC_003143.1	RefSeq	region	59607	59699	.	-	.	ID=id47;Note=PS01081 Bacterial regulatory proteins%2C tetR family signature.;Dbxref=GeneID:1172896;gbkey=misc_feature;gene=slmA
NC_003143.1	RefSeq	region	59622	59687	.	-	.	ID=id48;Note=Predicted helix-turn-helix motif with score 1905 %28%2B5.68 SD%29 at aa 32-53%2C sequence ITTAKLAANVGVSEAALYRHFP;Dbxref=GeneID:1172896;gbkey=misc_feature;gene=slmA
NC_003143.1	RefSeq	gene	59902	60357	.	-	.	ID=gene51;Name=dut;Dbxref=GeneID:1172897;gbkey=Gene;gene=dut;gene_synonym=sof;locus_tag=YPO0047
NC_003143.1	RefSeq	CDS	59902	60357	.	-	0	ID=cds46;Name=YP_002345143.1;Parent=gene51;Note=catalyzes the formation of dUMP from dUTP;Dbxref=InterPro:IPR003232,InterPro:IPR008180,InterPro:IPR008181,UniProtKB%2FTrEMBL:Q0WKP5,Genbank:YP_002345143.1,GeneID:1172897;gbkey=CDS;gene=dut;product=deoxyuridine 5%27-triphosphate nucleotidohydrolase;protein_id=YP_002345143.1;transl_table=11
NC_003143.1	RefSeq	gene	60338	61552	.	-	.	ID=gene52;Name=dfp;Dbxref=GeneID:1172898;gbkey=Gene;gene=dfp;locus_tag=YPO0048
NC_003143.1	RefSeq	CDS	60338	61552	.	-	0	ID=cds47;Name=YP_002345144.1;Parent=gene52;Note=catalyzes the conjugation of cysteine to 4%27-phosphopantothenate to form 4-phosphopantothenoylcysteine%2C which is then decarboxylated to form 4%27-phosphopantotheine;Dbxref=InterPro:IPR003382,InterPro:IPR005252,InterPro:IPR007085,UniProtKB%2FTrEMBL:Q74YA6,Genbank:YP_002345144.1,GeneID:1172898;gbkey=CDS;gene=dfp;product=bifunctional phosphopantothenoylcysteine decarboxylase%2Fphosphopantothenate synthase;protein_id=YP_002345144.1;transl_table=11
NC_003143.1	RefSeq	region	60728	60760	.	-	.	ID=id49;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site.;Dbxref=GeneID:1172898;gbkey=misc_feature;gene=dfp
NC_003143.1	RefSeq	gene	61749	62417	.	+	.	ID=gene53;Name=radC;Dbxref=GeneID:1172899;gbkey=Gene;gene=radC;locus_tag=YPO0049
NC_003143.1	RefSeq	CDS	61749	62417	.	+	0	ID=cds48;Name=YP_002345145.1;Parent=gene53;Note=Involved in DNA double-strand break repair and recombination. Promotes the annealing of complementary single-stranded DNA and by simulation of RAD51 recombinase;Dbxref=InterPro:IPR001405,InterPro:IPR010994,UniProtKB%2FTrEMBL:Q0WKP3,Genbank:YP_002345145.1,GeneID:1172899;gbkey=CDS;gene=radC;product=DNA repair protein RadC;protein_id=YP_002345145.1;transl_table=11
NC_003143.1	RefSeq	region	62259	62276	.	+	.	ID=id50;Note=PS01302 DNA repair protein radC family signature.;Dbxref=GeneID:1172899;gbkey=misc_feature;gene=radC
NC_003143.1	RefSeq	gene	62680	62916	.	+	.	ID=gene54;Name=rpmB;Dbxref=GeneID:1172900;gbkey=Gene;gene=rpmB;locus_tag=YPO0050
NC_003143.1	RefSeq	CDS	62680	62916	.	+	0	ID=cds49;Name=YP_002345146.1;Parent=gene54;Note=required for 70S ribosome assembly;Dbxref=InterPro:IPR001383,UniProtKB%2FTrEMBL:Q0WKP2,Genbank:YP_002345146.1,GeneID:1172900;gbkey=CDS;gene=rpmB;product=50S ribosomal protein L28;protein_id=YP_002345146.1;transl_table=11
NC_003143.1	RefSeq	gene	62928	63095	.	+	.	ID=gene55;Name=rpmG;Dbxref=GeneID:1172901;gbkey=Gene;gene=rpmG;locus_tag=YPO0051
NC_003143.1	RefSeq	CDS	62928	63095	.	+	0	ID=cds50;Name=YP_002345147.1;Parent=gene55;Note=in Escherichia coli BM108%2C a mutation that results in lack of L33 synthesis had no effect on ribosome synthesis or function%3B there are paralogous genes in several bacterial genomes%2C and a CXXC motif for zinc binding and an upstream regulation region of the paralog lacking this motif that are regulated by zinc similar to other ribosomal proteins like L31%3B the proteins in this group lack the CXXC motif;Dbxref=InterPro:IPR001705,UniProtKB%2FTrEMBL:Q0WKP1,Genbank:YP_002345147.1,GeneID:1172901;gbkey=CDS;gene=rpmG;product=50S ribosomal protein L33;protein_id=YP_002345147.1;transl_table=11
NC_003143.1	RefSeq	region	62988	63047	.	+	.	ID=id51;Note=PS00582 Ribosomal protein L33 signature.;Dbxref=GeneID:1172901;gbkey=misc_feature;gene=rpmG
NC_003143.1	RefSeq	gene	63178	63987	.	+	.	ID=gene56;Name=mutM;Dbxref=GeneID:1172902;gbkey=Gene;gene=mutM;locus_tag=YPO0052
NC_003143.1	RefSeq	CDS	63178	63987	.	+	0	ID=cds51;Name=YP_002345148.1;Parent=gene56;Note=Involved in base excision repair of DNA damaged by oxidation or by mutagenic agents. Acts as DNA glycosylase that recognizes and removes damaged bases;Dbxref=InterPro:IPR000191,InterPro:IPR000214,InterPro:IPR010663,InterPro:IPR010979,InterPro:IPR012319,UniProtKB%2FTrEMBL:Q0WKP0,Genbank:YP_002345148.1,GeneID:1172902;gbkey=CDS;gene=mutM;product=formamidopyrimidine-DNA glycosylase;protein_id=YP_002345148.1;transl_table=11
NC_003143.1	RefSeq	gene	63993	64472	.	-	.	ID=gene57;Name=coaD;Dbxref=GeneID:1172903;gbkey=Gene;gene=coaD;gene_synonym=kdtB;locus_tag=YPO0053
NC_003143.1	RefSeq	CDS	63993	64472	.	-	0	ID=cds52;Name=YP_002345149.1;Parent=gene57;Note=Catalyzes the conversion of ATP and pantetheine 4%27-phosphate to diphosphate and 3%27-dephospho-coA;Dbxref=InterPro:IPR001980,InterPro:IPR004820,InterPro:IPR004821,UniProtKB%2FTrEMBL:Q0WKN9,Genbank:YP_002345149.1,GeneID:1172903;gbkey=CDS;gene=coaD;product=phosphopantetheine adenylyltransferase;protein_id=YP_002345149.1;transl_table=11
NC_003143.1	RefSeq	gene	64469	65251	.	-	.	ID=gene58;Name=kdtX;Dbxref=GeneID:1172904;gbkey=Gene;gene=kdtX;gene_synonym=waaE;locus_tag=YPO0054
NC_003143.1	RefSeq	CDS	64469	65251	.	-	0	ID=cds53;Name=YP_002345150.1;Parent=gene58;Dbxref=InterPro:IPR001173,UniProtKB%2FTrEMBL:Q7CLB6,Genbank:YP_002345150.1,GeneID:1172904;gbkey=CDS;gene=kdtX;product=lipopolysaccharide core biosynthesis glycosyl transferase;protein_id=YP_002345150.1;transl_table=11
NC_003143.1	RefSeq	gene	65252	66529	.	-	.	ID=gene59;Name=kdtA;Dbxref=GeneID:1172905;gbkey=Gene;gene=kdtA;gene_synonym=waaA;locus_tag=YPO0055
NC_003143.1	RefSeq	CDS	65252	66529	.	-	0	ID=cds54;Name=YP_002345151.1;Parent=gene59;Note=catalyzes the transfer of 2-keto-3-deoxy-D-manno-octulosonic acid to lipid A;Dbxref=InterPro:IPR001296,InterPro:IPR007507,UniProtKB%2FTrEMBL:Q0WKN7,Genbank:YP_002345151.1,GeneID:1172905;gbkey=CDS;gene=kdtA;product=3-deoxy-D-manno-octulosonic-acid transferase;protein_id=YP_002345151.1;transl_table=11
NC_003143.1	RefSeq	gene	66949	67914	.	-	.	ID=gene60;Name=rfaC;Dbxref=GeneID:1172906;gbkey=Gene;gene=rfaC;gene_synonym=waaC;locus_tag=YPO0056
NC_003143.1	RefSeq	CDS	66949	67914	.	-	0	ID=cds55;Name=YP_002345152.1;Parent=gene60;Dbxref=InterPro:IPR002201,InterPro:IPR011908,UniProtKB%2FTrEMBL:Q0WKN6,Genbank:YP_002345152.1,GeneID:1172906;gbkey=CDS;gene=rfaC;product=ADP-heptose:LPS heptosyl transferase I;protein_id=YP_002345152.1;transl_table=11
NC_003143.1	RefSeq	gene	67914	68978	.	-	.	ID=gene61;Name=rfaF;Dbxref=GeneID:1172907;gbkey=Gene;gene=rfaF;gene_synonym=waaF;locus_tag=YPO0057
NC_003143.1	RefSeq	CDS	67914	68978	.	-	0	ID=cds56;Name=YP_002345153.1;Parent=gene61;Note=catalyzes the transfer of the second heptose to the heptosyl-KDO2 moiety of the lipopolysaccharide inner core;Dbxref=InterPro:IPR002201,InterPro:IPR011910,UniProtKB%2FTrEMBL:Q0WKN5,Genbank:YP_002345153.1,GeneID:1172907;gbkey=CDS;gene=rfaF;product=ADP-heptose:LPS heptosyltransferase II;protein_id=YP_002345153.1;transl_table=11
NC_003143.1	RefSeq	gene	69009	69941	.	-	.	ID=gene62;Name=rfaD;Dbxref=GeneID:1172908;gbkey=Gene;gene=rfaD;locus_tag=YPO0058
NC_003143.1	RefSeq	CDS	69009	69941	.	-	0	ID=cds57;Name=YP_002345154.1;Parent=gene62;Note=catalyzes the interconversion between ADP-D-glycero-beta-D-manno-heptose and ADP-L-glycero-beta-D-manno-heptose;Dbxref=InterPro:IPR001509,InterPro:IPR011912,UniProtKB%2FTrEMBL:Q0WKN4,Genbank:YP_002345154.1,GeneID:1172908;gbkey=CDS;gene=rfaD;product=ADP-L-glycero-D-manno-heptose-6-epimerase;protein_id=YP_002345154.1;transl_table=11
NC_003143.1	RefSeq	gene	70187	71398	.	+	.	ID=gene63;Name=kbl;Dbxref=GeneID:1172909;gbkey=Gene;gene=kbl;locus_tag=YPO0059
NC_003143.1	RefSeq	CDS	70187	71398	.	+	0	ID=cds58;Name=YP_002345155.1;Parent=gene63;Note=catalyzes the formation of 2-amino-3-oxobutanoate from acetyl-CoA and glycine;Dbxref=InterPro:IPR001917,InterPro:IPR004839,InterPro:IPR011282,UniProtKB%2FTrEMBL:Q0WKN3,Genbank:YP_002345155.1,GeneID:1172909;gbkey=CDS;gene=kbl;product=2-amino-3-ketobutyrate CoA ligase;protein_id=YP_002345155.1;transl_table=11
NC_003143.1	RefSeq	region	70922	70951	.	+	.	ID=id52;Note=PS00599 Aminotransferases class-II pyridoxal-phosphate attachment site.;Dbxref=GeneID:1172909;gbkey=misc_feature;gene=kbl
NC_003143.1	RefSeq	gene	71408	72433	.	+	.	ID=gene64;Name=tdh;Dbxref=GeneID:1172910;gbkey=Gene;gene=tdh;locus_tag=YPO0060
NC_003143.1	RefSeq	CDS	71408	72433	.	+	0	ID=cds59;Name=YP_002345156.1;Parent=gene64;Note=converts threonine and NAD to 1%2C2-amino-3-oxobutanoate and NADH%3B functions in threonine catabolism;Dbxref=InterPro:IPR002085,InterPro:IPR002328,InterPro:IPR004627,InterPro:IPR011032,InterPro:IPR011597,InterPro:IPR013149,InterPro:IPR013154,UniProtKB%2FTrEMBL:Q0WKN2,Genbank:YP_002345156.1,GeneID:1172910;gbkey=CDS;gene=tdh;product=L-threonine 3-dehydrogenase;protein_id=YP_002345156.1;transl_table=11
NC_003143.1	RefSeq	region	71591	71635	.	+	.	ID=id53;Note=PS00059 Zinc-containing alcohol dehydrogenases signature.;Dbxref=GeneID:1172910;gbkey=misc_feature;gene=tdh
NC_003143.1	RefSeq	gene	72571	73370	.	-	.	ID=gene65;Name=YPO0061;Dbxref=GeneID:1172911;gbkey=Gene;locus_tag=YPO0061;pseudo=true
NC_003143.1	RefSeq	region	72571	73370	.	-	.	ID=id54;Note=Similar to Escherichia coli hypothetical 30.7 kDa protein YibQ SW:YIBQ_ECOLI %28P37691%29 %28277 aa%29 fasta scores: E%28%29: 4.2e-22%2C 58.5%25 id in 265 aa. Is likely to have undergone a deletion event which has also lead to a shift in reading frame %28after aa 97%29.;Dbxref=GeneID:1172911;gbkey=misc_feature;pseudo=true
NC_003143.1	RefSeq	gene	73529	74881	.	-	.	ID=gene66;Name=YPO0063;Dbxref=GeneID:1172912;gbkey=Gene;locus_tag=YPO0063
NC_003143.1	RefSeq	CDS	73529	74881	.	-	0	ID=cds60;Name=YP_002345157.1;Parent=gene66;Dbxref=InterPro:IPR002886,InterPro:IPR011055,UniProtKB%2FTrEMBL:Q0WKN1,Genbank:YP_002345157.1,GeneID:1172912;gbkey=CDS;product=hypothetical protein;protein_id=YP_002345157.1;transl_table=11
NC_003143.1	RefSeq	gene	74909	76456	.	-	.	ID=gene67;Name=YPO0064;Dbxref=GeneID:1172913;gbkey=Gene;locus_tag=YPO0064
NC_003143.1	RefSeq	CDS	74909	76456	.	-	0	ID=cds61;Name=YP_002345158.1;Parent=gene67;Note=catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate;Dbxref=InterPro:IPR005995,InterPro:IPR006124,InterPro:IPR011258,UniProtKB%2FTrEMBL:Q0WKN0,Genbank:YP_002345158.1,GeneID:1172913;gbkey=CDS;product=phosphoglyceromutase;protein_id=YP_002345158.1;transl_table=11
NC_003143.1	RefSeq	gene	76853	77287	.	+	.	ID=gene68;Name=YPO0065;Dbxref=GeneID:1172914;gbkey=Gene;locus_tag=YPO0065
NC_003143.1	RefSeq	CDS	76853	77287	.	+	0	ID=cds62;Name=YP_002345159.1;Parent=gene68;Dbxref=InterPro:IPR001763,UniProtKB%2FTrEMBL:Q7CLB7,Genbank:YP_002345159.1,GeneID:1172914;gbkey=CDS;product=hypothetical protein;protein_id=YP_002345159.1;transl_table=11
NC_003143.1	RefSeq	region	76889	76945	.	+	.	ID=id55;Note=1 probable transmembrane helix predicted;Dbxref=GeneID:1172914;gbkey=misc_feature
NC_003143.1	RefSeq	gene	77406	77654	.	+	.	ID=gene69;Name=grxC;Dbxref=GeneID:1172915;gbkey=Gene;gene=grxC;locus_tag=YPO0066
NC_003143.1	RefSeq	CDS	77406	77654	.	+	0	ID=cds63;Name=YP_002345160.1;Parent=gene69;Dbxref=InterPro:IPR002109,InterPro:IPR011767,InterPro:IPR011900,InterPro:IPR012335,InterPro:IPR012336,UniProtKB%2FTrEMBL:Q7CLB8,Genbank:YP_002345160.1,GeneID:1172915;gbkey=CDS;gene=grxC;product=glutaredoxin 3;protein_id=YP_002345160.1;transl_table=11
NC_003143.1	RefSeq	gene	77742	78218	.	+	.	ID=gene70;Name=secB;Dbxref=GeneID:1172916;gbkey=Gene;gene=secB;locus_tag=YPO0067
NC_003143.1	RefSeq	CDS	77742	78218	.	+	0	ID=cds64;Name=YP_002345161.1;Parent=gene70;Note=molecular chaperone that is required for the normal export of envelope proteins out of the cell cytoplasm%3B in Escherichia coli this proteins forms a homotetramer in the cytoplasm and delivers proteins to be exported to SecA;Dbxref=InterPro:IPR003708,UniProtKB%2FTrEMBL:Q0WKM7,Genbank:YP_002345161.1,GeneID:1172916;gbkey=CDS;gene=secB;product=preprotein translocase subunit SecB;protein_id=YP_002345161.1;transl_table=11
NC_003143.1	RefSeq	gene	78218	79237	.	+	.	ID=gene71;Name=gpsA;Dbxref=GeneID:1172917;gbkey=Gene;gene=gpsA;locus_tag=YPO0068
NC_003143.1	RefSeq	CDS	78218	79237	.	+	0	ID=cds65;Name=YP_002345162.1;Parent=gene71;Note=catalyzes the NAD%28P%29H-dependent reduction of glycerol 3-phosphate to glycerone phosphate;Dbxref=InterPro:IPR006109,InterPro:IPR006168,InterPro:IPR008927,InterPro:IPR011128,UniProtKB%2FTrEMBL:Q0WKM6,Genbank:YP_002345162.1,GeneID:1172917;gbkey=CDS;gene=gpsA;product=NAD%28P%29H-dependent glycerol-3-phosphate dehydrogenase;protein_id=YP_002345162.1;transl_table=11
NC_003143.1	RefSeq	region	78791	78856	.	+	.	ID=id56;Note=PS00957 NAD-dependent glycerol-3-phosphate dehydrogenase signature.;Dbxref=GeneID:1172917;gbkey=misc_feature;gene=gpsA
NC_003143.1	RefSeq	gene	79297	79437	.	+	.	ID=gene72;Name=YPO0069;Dbxref=GeneID:1172918;gbkey=Gene;locus_tag=YPO0069
NC_003143.1	RefSeq	CDS	79297	79437	.	+	0	ID=cds66;Name=YP_002345163.1;Parent=gene72;Note=No significant database hits;Dbxref=UniProtKB%2FTrEMBL:Q74Y95,Genbank:YP_002345163.1,GeneID:1172918;gbkey=CDS;product=hypothetical protein;protein_id=YP_002345163.1;transl_table=11
NC_003143.1	RefSeq	gene	79503	80324	.	+	.	ID=gene73;Name=cysE;Dbxref=GeneID:1172919;gbkey=Gene;gene=cysE;locus_tag=YPO0070
NC_003143.1	RefSeq	CDS	79503	80324	.	+	0	ID=cds67;Name=YP_002345164.1;Parent=gene73;Note=catalyzes the O-acetylation of serine;Dbxref=InterPro:IPR001451,InterPro:IPR005881,InterPro:IPR010493,InterPro:IPR011004,UniProtKB%2FTrEMBL:Q0WKM4,Genbank:YP_002345164.1,GeneID:1172919;gbkey=CDS;gene=cysE;product=serine acetyltransferase;protein_id=YP_002345164.1;transl_table=11
NC_003143.1	RefSeq	region	80106	80192	.	+	.	ID=id57;Note=PS00101 Hexapeptide-repeat containing-transferases signature.;Dbxref=GeneID:1172919;gbkey=misc_feature;gene=cysE
NC_003143.1	RefSeq	gene	80447	80935	.	-	.	ID=gene74;Name=YPO0071;Dbxref=GeneID:1172920;gbkey=Gene;locus_tag=YPO0071
NC_003143.1	RefSeq	CDS	80447	80935	.	-	0	ID=cds68;Name=YP_002345165.1;Parent=gene74;Dbxref=InterPro:IPR001537,InterPro:IPR004440,UniProtKB%2FTrEMBL:Q74Y93,Genbank:YP_002345165.1,GeneID:1172920;gbkey=CDS;product=methyltransferase;protein_id=YP_002345165.1;transl_table=11
NC_003143.1	RefSeq	gene	81124	82188	.	+	.	ID=gene75;Name=YPO0072;Dbxref=GeneID:1172921;gbkey=Gene;locus_tag=YPO0072
NC_003143.1	RefSeq	CDS	81124	82188	.	+	0	ID=cds69;Name=YP_002345166.1;Parent=gene75;Dbxref=InterPro:IPR000005,InterPro:IPR001497,InterPro:IPR004026,InterPro:IPR008332,InterPro:IPR009057,InterPro:IPR011991,InterPro:IPR012287,UniProtKB%2FTrEMBL:Q7CLC0,Genbank:YP_002345166.1,GeneID:1172921;gbkey=CDS;product=bifunctional regulatory protein%2FDNA repair protein;protein_id=YP_002345166.1;transl_table=11
NC_003143.1	RefSeq	region	81367	81498	.	+	.	ID=id58;Note=PS00041 Bacterial regulatory proteins%2C araC family signature.;Dbxref=GeneID:1172921;gbkey=misc_feature
NC_003143.1	RefSeq	region	81412	81477	.	+	.	ID=id59;Note=Predicted helix-turn-helix motif with score 1162 %28%2B3.14 SD%29 at aa 97-118%2C sequence PKLNELAAQLGLSTFYFHRLFK;Dbxref=GeneID:1172921;gbkey=misc_feature
NC_003143.1	RefSeq	region	82069	82089	.	+	.	ID=id60;Note=PS00374 Methylated-DNA--protein-cysteine methyltransferase active site.;Dbxref=GeneID:1172921;gbkey=misc_feature
NC_003143.1	RefSeq	gene	82237	83613	.	-	.	ID=gene76;Name=cpxA;Dbxref=GeneID:1172922;gbkey=Gene;gene=cpxA;locus_tag=YPO0073
NC_003143.1	RefSeq	CDS	82237	83613	.	-	0	ID=cds70;Name=YP_002345167.1;Parent=gene76;Note=part of two-component CpxA%2FCpxR system%3B senses envelope stress%3B upregulates a number of periplasmic folding and trafficking factors;Dbxref=InterPro:IPR003594,InterPro:IPR003660,InterPro:IPR003661,InterPro:IPR004358,InterPro:IPR005467,InterPro:IPR009082,UniProtKB%2FTrEMBL:Q7CLC1,Genbank:YP_002345167.1,GeneID:1172922;gbkey=CDS;gene=cpxA;product=two-component sensor protein;protein_id=YP_002345167.1;transl_table=11
NC_003143.1	RefSeq	gene	83610	84308	.	-	.	ID=gene77;Name=cpxR;Dbxref=GeneID:1172923;gbkey=Gene;gene=cpxR;locus_tag=YPO0074
NC_003143.1	RefSeq	CDS	83610	84308	.	-	0	ID=cds71;Name=YP_002345168.1;Parent=gene77;Note=response regulator in two-component regulatory system with CpxA%3B part of the envelope stress response system;Dbxref=InterPro:IPR001789,InterPro:IPR001867,InterPro:IPR011006,InterPro:IPR011991,UniProtKB%2FTrEMBL:Q0WKM0,Genbank:YP_002345168.1,GeneID:1172923;gbkey=CDS;gene=cpxR;product=DNA-binding transcriptional regulator CpxR;protein_id=YP_002345168.1;transl_table=11
NC_003143.1	RefSeq	gene	84482	84970	.	+	.	ID=gene78;Name=cpxP;Dbxref=GeneID:1172924;gbkey=Gene;gene=cpxP;locus_tag=YPO0075
NC_003143.1	RefSeq	CDS	84482	84970	.	+	0	ID=cds72;Name=YP_002345169.1;Parent=gene78;Note=repressor of the Cpx envelope stress response pathway which occurs via periplasmic interactions with CpxA%3B CpxP is degraded by DegP protease especially in the presence of misfolded substrates;Dbxref=InterPro:IPR012899,UniProtKB%2FTrEMBL:Q7CLC2,Genbank:YP_002345169.1,GeneID:1172924;gbkey=CDS;gene=cpxP;product=periplasmic stress adaptor protein CpxP;protein_id=YP_002345169.1;transl_table=11
NC_003143.1	RefSeq	gene	85648	86607	.	+	.	ID=gene79;Name=YPO0076;Dbxref=GeneID:1172925;gbkey=Gene;locus_tag=YPO0076
NC_003143.1	RefSeq	CDS	85648	86607	.	+	0	ID=cds73;Name=YP_002345170.1;Parent=gene79;Dbxref=InterPro:IPR000627,InterPro:IPR006842,InterPro:IPR010106,InterPro:IPR012287,UniProtKB%2FTrEMBL:Q7CLC3,Genbank:YP_002345170.1,GeneID:1172925;gbkey=CDS;product=hypothetical protein;protein_id=YP_002345170.1;transl_table=11
NC_003143.1	RefSeq	gene	87169	88071	.	+	.	ID=gene80;Name=fieF;Dbxref=GeneID:1172926;gbkey=Gene;gene=fieF;locus_tag=YPO0077
NC_003143.1	RefSeq	CDS	87169	88071	.	+	0	ID=cds74;Name=YP_002345171.1;Parent=gene80;Note=member of cation diffusion facilitator family%3B CDF%3B membrane-bound%3B induced by both zinc and iron%2C but does not induce resistance to zinc%3B can transport zinc%28II%29 in a proton-dependent manner%3B instead this protein induces iron resistance%3B forms dimers;Dbxref=InterPro:IPR002524,UniProtKB%2FTrEMBL:Q0WKL7,Genbank:YP_002345171.1,GeneID:1172926;gbkey=CDS;gene=fieF;product=ferrous iron efflux protein F;protein_id=YP_002345171.1;transl_table=11
NC_003143.1	RefSeq	gene	88289	89272	.	+	.	ID=gene81;Name=pfkA;Dbxref=GeneID:1172927;gbkey=Gene;gene=pfkA;locus_tag=YPO0078
NC_003143.1	RefSeq	CDS	88289	89272	.	+	0	ID=cds75;Name=YP_002345172.1;Parent=gene81;Note=catalyzes the formation of D-fructose 1%2C6-bisphosphate from D-fructose 6-phosphate in glycolysis;Dbxref=InterPro:IPR000023,InterPro:IPR012003,InterPro:IPR012828,UniProtKB%2FTrEMBL:Q0WKL6,Genbank:YP_002345172.1,GeneID:1172927;gbkey=CDS;gene=pfkA;product=6-phosphofructokinase;protein_id=YP_002345172.1;transl_table=11
NC_003143.1	RefSeq	region	89021	89077	.	+	.	ID=id61;Note=PS00433 Phosphofructokinase signature.;Dbxref=GeneID:1172927;gbkey=misc_feature;gene=pfkA
NC_003143.1	RefSeq	gene	89493	90482	.	+	.	ID=gene82;Name=sbp1;Dbxref=GeneID:1172928;gbkey=Gene;gene=sbp1;locus_tag=YPO0079
NC_003143.1	RefSeq	CDS	89493	90482	.	+	0	ID=cds76;Name=YP_002345173.1;Parent=gene82;Dbxref=InterPro:IPR000957,InterPro:IPR005669,InterPro:IPR006059,UniProtKB%2FTrEMBL:Q0WKL5,Genbank:YP_002345173.1,GeneID:1172928;gbkey=CDS;gene=sbp1;product=sulfate transporter subunit;protein_id=YP_002345173.1;transl_table=11
NC_003143.1	RefSeq	region	89925	89951	.	+	.	ID=id62;Note=PS00757 Prokaryotic sulfate-binding proteins signature 2.;Dbxref=GeneID:1172928;gbkey=misc_feature;gene=sbp1
NC_003143.1	RefSeq	gene	90732	91550	.	-	.	ID=gene83;Name=YPO0080;Dbxref=GeneID:1172929;gbkey=Gene;locus_tag=YPO0080
NC_003143.1	RefSeq	CDS	90732	91550	.	-	0	ID=cds77;Name=YP_002345174.1;Parent=gene83;Dbxref=InterPro:IPR011587,UniProtKB%2FTrEMBL:Q74Y83,Genbank:YP_002345174.1,GeneID:1172929;gbkey=CDS;product=hypothetical protein;protein_id=YP_002345174.1;transl_table=11
NC_003143.1	RefSeq	gene	91626	93053	.	-	.	ID=gene84;Name=YPO0081;Dbxref=GeneID:1172930;gbkey=Gene;locus_tag=YPO0081
NC_003143.1	RefSeq	CDS	91626	93053	.	-	0	ID=cds78;Name=YP_002345175.1;Parent=gene84;Dbxref=InterPro:IPR001898,UniProtKB%2FTrEMBL:Q7CLC5,Genbank:YP_002345175.1,GeneID:1172930;gbkey=CDS;product=membrane transport protein;protein_id=YP_002345175.1;transl_table=11
NC_003143.1	RefSeq	gene	93119	93832	.	-	.	ID=gene85;Name=YPO0082;Dbxref=GeneID:1172931;gbkey=Gene;locus_tag=YPO0082
NC_003143.1	RefSeq	CDS	93119	93832	.	-	0	ID=cds79;Name=YP_002345176.1;Parent=gene85;Dbxref=InterPro:IPR005493,UniProtKB%2FTrEMBL:Q7CLC6,Genbank:YP_002345176.1,GeneID:1172931;gbkey=CDS;product=hypothetical protein;protein_id=YP_002345176.1;transl_table=11
NC_003143.1	RefSeq	gene	93829	94566	.	-	.	ID=gene86;Name=YPO0083;Dbxref=GeneID:1172932;gbkey=Gene;locus_tag=YPO0083
NC_003143.1	RefSeq	CDS	93829	94566	.	-	0	ID=cds80;Name=YP_002345177.2;Parent=gene86;Dbxref=InterPro:IPR003737,UniProtKB%2FTrEMBL:Q0WKL1,Genbank:YP_002345177.2,GeneID:1172932;gbkey=CDS;product=hypothetical protein;protein_id=YP_002345177.2;transl_table=11
NC_003143.1	RefSeq	gene	94892	95938	.	+	.	ID=gene87;Name=YPO0084;Dbxref=GeneID:1172933;gbkey=Gene;locus_tag=YPO0084
NC_003143.1	RefSeq	CDS	94892	95938	.	+	0	ID=cds81;Name=YP_002345178.1;Parent=gene87;Dbxref=InterPro:IPR000847,InterPro:IPR005119,InterPro:IPR011991,UniProtKB%2FTrEMBL:Q0WKL0,Genbank:YP_002345178.1,GeneID:1172933;gbkey=CDS;product=transcriptional regulator;protein_id=YP_002345178.1;transl_table=11
NC_003143.1	RefSeq	region	95078	95143	.	+	.	ID=id63;Note=Predicted helix-turn-helix motif with score 1283 %28%2B3.56 SD%29 at aa 63-84%2C sequence QHALHVAQALDITQSAVSAALK;Dbxref=GeneID:1172933;gbkey=misc_feature
NC_003143.1	RefSeq	region	95081	95173	.	+	.	ID=id64;Note=PS00044 Bacterial regulatory proteins%2C lysR family signature.;Dbxref=GeneID:1172933;gbkey=misc_feature
NC_003143.1	RefSeq	gene	96170	96937	.	-	.	ID=gene88;Name=tpiA;Dbxref=GeneID:1172934;gbkey=Gene;gene=tpiA;locus_tag=YPO0085
NC_003143.1	RefSeq	CDS	96170	96937	.	-	0	ID=cds82;Name=YP_002345179.1;Parent=gene88;Note=Reversibly isomerizes the ketone sugar dihydroxyacetone phosphate to the aldehyde sugar glyceraldehyde-3-phosphate;Dbxref=InterPro:IPR000652,UniProtKB%2FTrEMBL:Q0WKK9,Genbank:YP_002345179.1,GeneID:1172934;gbkey=CDS;gene=tpiA;product=triosephosphate isomerase;protein_id=YP_002345179.1;transl_table=11
NC_003143.1	RefSeq	region	96413	96445	.	-	.	ID=id65;Note=PS00171 Triosephosphate isomerase active site.;Dbxref=GeneID:1172934;gbkey=misc_feature;gene=tpiA
NC_003143.1	RefSeq	gene	97066	97701	.	-	.	ID=gene89;Name=YPO0086;Dbxref=GeneID:1172935;gbkey=Gene;locus_tag=YPO0086
NC_003143.1	RefSeq	CDS	97066	97701	.	-	0	ID=cds83;Name=YP_002345180.1;Parent=gene89;Dbxref=InterPro:IPR009918,UniProtKB%2FTrEMBL:Q74Y77,Genbank:YP_002345180.1,GeneID:1172935;gbkey=CDS;product=hypothetical protein;protein_id=YP_002345180.1;transl_table=11
NC_003143.1	RefSeq	gene	97849	98283	.	+	.	ID=gene90;Name=YPO0087;Dbxref=GeneID:1172936;gbkey=Gene;locus_tag=YPO0087
NC_003143.1	RefSeq	CDS	97849	98283	.	+	0	ID=cds84;Name=YP_002345181.1;Parent=gene90;Dbxref=InterPro:IPR008523,UniProtKB%2FTrEMBL:Q0WKK7,Genbank:YP_002345181.1,GeneID:1172936;gbkey=CDS;product=hypothetical protein;protein_id=YP_002345181.1;transl_table=11
NC_003143.1	RefSeq	gene	98624	99370	.	-	.	ID=gene91;Name=fpr;Dbxref=GeneID:1172937;gbkey=Gene;gene=fpr;gene_synonym=mvrA;locus_tag=YPO0088
NC_003143.1	RefSeq	CDS	98624	99370	.	-	0	ID=cds85;Name=YP_002345182.1;Parent=gene91;Dbxref=InterPro:IPR001433,InterPro:IPR001709,InterPro:IPR008333,UniProtKB%2FTrEMBL:Q7CLC7,Genbank:YP_002345182.1,GeneID:1172937;gbkey=CDS;gene=fpr;product=ferredoxin-NADP reductase;protein_id=YP_002345182.1;transl_table=11
NC_003143.1	RefSeq	gene	99525	100193	.	-	.	ID=gene92;Name=%27glpX;Dbxref=GeneID:1172938;gbkey=Gene;gene=%27glpX;locus_tag=YPO0089;pseudo=true
NC_003143.1	RefSeq	region	99525	100193	.	-	.	ID=id66;Note=Partial CDS which is highly similar to Escherichia coli protein GlpX%2C a protein of unknown function thought to be involved in glycerol metabolism%2C SW:GLPX_ECOLI %28P28860%29 %28336 aa%29 fasta scores: E%28%29: 0%2C 81.1%25 id in 222 aa. The predicted product of this CDS lacks 114 aa from the N-terminal following a likely deletion event;Dbxref=GeneID:1172938;gbkey=misc_feature;gene=%27glpX;pseudo=true
NC_003143.1	RefSeq	gene	100264	101355	.	-	.	ID=gene93;Name=glpK%27;Dbxref=GeneID:1172939;gbkey=Gene;gene=glpK%27;locus_tag=YPO0090;pseudo=true
NC_003143.1	RefSeq	region	100264	101355	.	-	.	ID=id67;Note=Partial CDS which is highly similar to Escherichia coli glycerol kinase GlpK SW:GLPK_ECOLI %28P08859%29 %28501 aa%29 fasta scores: E%28%29: 0%2C 81.3%25 id in 380 aa. The predicted product of this CDS lacks approximately 120 aa from the C-terminal following a likely deletion event.;Dbxref=GeneID:1172939;gbkey=misc_feature;gene=glpK%27;pseudo=true
NC_003143.1	RefSeq	region	100897	100935	.	-	.	ID=id68;Note=PS00933 FGGY family of carbohydrate kinases signature 1.;Dbxref=GeneID:1172939;gbkey=misc_feature;gene=glpK%27
NC_003143.1	RefSeq	gene	101532	102380	.	-	.	ID=gene94;Name=glpF;Dbxref=GeneID:1172940;gbkey=Gene;gene=glpF;locus_tag=YPO0091
NC_003143.1	RefSeq	CDS	101532	102380	.	-	0	ID=cds86;Name=YP_002345183.1;Parent=gene94;Dbxref=InterPro:IPR000425,InterPro:IPR012269,UniProtKB%2FTrEMBL:Q7CLC8,Genbank:YP_002345183.1,GeneID:1172940;gbkey=CDS;gene=glpF;product=glycerol uptake facilitator protein;protein_id=YP_002345183.1;transl_table=11
NC_003143.1	RefSeq	region	102153	102179	.	-	.	ID=id69;Note=PS00221 MIP family signature.;Dbxref=GeneID:1172940;gbkey=misc_feature;gene=glpF
NC_003143.1	RefSeq	gene	103008	103247	.	+	.	ID=gene95;Name=YPO0093;Dbxref=GeneID:1172942;gbkey=Gene;locus_tag=YPO0093
NC_003143.1	RefSeq	CDS	103008	103247	.	+	0	ID=cds87;Name=YP_002345185.1;Parent=gene95;Dbxref=InterPro:IPR009252,UniProtKB%2FTrEMBL:Q7CLC9,Genbank:YP_002345185.1,GeneID:1172942;gbkey=CDS;product=hypothetical protein;protein_id=YP_002345185.1;transl_table=11
NC_003143.1	RefSeq	repeat_region	103347	104058	.	-	.	ID=id70;Note=Contains an %27A%27 at nucleotide position 315.%7EIS200-like insertion sequence:IS1541;gbkey=repeat_region
NC_003143.1	RefSeq	gene	103455	103913	.	-	.	ID=gene96;Name=tnp;Dbxref=GeneID:1172943;gbkey=Gene;gene=tnp;locus_tag=YPO0094
NC_003143.1	RefSeq	CDS	103455	103913	.	-	0	ID=cds88;Name=YP_002345186.1;Parent=gene96;Dbxref=InterPro:IPR002686,UniProtKB%2FTrEMBL:Q56938,Genbank:YP_002345186.1,GeneID:1172943;gbkey=CDS;gene=tnp;product=transposase for the IS1541 insertion element;protein_id=YP_002345186.1;transl_table=11
NC_003143.1	RefSeq	region	107535	108365	.	-	.	ID=id71;Note=Similar to Escherichia coli colicin V secretion ATP-binding protein CvaB SW:CVAB_ECOLI %28P22520%29 %28698 aa%29 fasta scores: E%28%29: 0%2C 56.1%25 id in 699 aa. This CDS has been disrupted by the insertion of an IS100 element.;Dbxref=PSEUDO:CAL18784.1;gbkey=misc_feature;part=1%2F2;pseudo=true
NC_003143.1	RefSeq	region	104291	105577	.	-	.	ID=id71;Note=Similar to Escherichia coli colicin V secretion ATP-binding protein CvaB SW:CVAB_ECOLI %28P22520%29 %28698 aa%29 fasta scores: E%28%29: 0%2C 56.1%25 id in 699 aa. This CDS has been disrupted by the insertion of an IS100 element.;Dbxref=PSEUDO:CAL18784.1;gbkey=misc_feature;part=2%2F2;pseudo=true
NC_003143.1	RefSeq	region	104474	104518	.	-	.	ID=id72;Note=PS00211 ABC transporters family signature.;gbkey=misc_feature
NC_003143.1	RefSeq	region	104807	104830	.	-	.	ID=id73;Note=PS00017 ATP%2FGTP-binding site motif A %28P-loop%29.;gbkey=misc_feature
NC_003143.1	RefSeq	repeat_region	105579	107532	.	-	.	ID=id74;Note=insertion sequence:IS100;gbkey=repeat_region
NC_003143.1	RefSeq	repeat_region	105579	105606	.	+	.	ID=id75;Note=IS100 inverted repeat;gbkey=repeat_region
NC_003143.1	RefSeq	gene	105645	106427	.	-	.	ID=gene97;Name=YPO0096;Note=ypmt1.57c;Dbxref=GeneID:1172945;gbkey=Gene;locus_tag=YPO0096
NC_003143.1	RefSeq	CDS	105645	106427	.	-	0	ID=cds89;Name=YP_002345187.1;Parent=gene97;Dbxref=InterPro:IPR001270,InterPro:IPR002611,InterPro:IPR003593,UniProtKB%2FTrEMBL:Q7ARK4,Genbank:YP_002345187.1,GeneID:1172945;gbkey=CDS;product=transposase%2FIS protein;protein_id=YP_002345187.1;transl_table=11
NC_003143.1	RefSeq	region	106077	106100	.	-	.	ID=id76;Note=PS00017 ATP%2FGTP-binding site motif A %28P-loop%29.;Dbxref=GeneID:1172945;gbkey=misc_feature
NC_003143.1	RefSeq	gene	106424	107446	.	-	.	ID=gene98;Name=y1093;Dbxref=GeneID:1172946;gbkey=Gene;gene=y1093;gene_synonym=ypmt1;locus_tag=YPO0097
NC_003143.1	RefSeq	CDS	106424	107446	.	-	0	ID=cds90;Name=YP_002345188.1;Parent=gene98;Dbxref=InterPro:IPR001584,InterPro:IPR006120,InterPro:IPR009057,InterPro:IPR012287,InterPro:IPR012337,UniProtKB%2FTrEMBL:Q0WKK0,Genbank:YP_002345188.1,GeneID:1172946;gbkey=CDS;gene=y1093;product=transposase for insertion sequence IS100;protein_id=YP_002345188.1;transl_table=11
NC_003143.1	RefSeq	region	107330	107395	.	-	.	ID=id77;Note=Predicted helix-turn-helix motif with score 2147 %28%2B6.50 SD%29 at aa 18-39%2C sequence MSSRAIARELGISRNTVKRYLQ;Dbxref=GeneID:1172946;gbkey=misc_feature;gene=y1093
NC_003143.1	RefSeq	repeat_region	107505	107532	.	-	.	ID=id78;Note=IS100 inverted repeat;gbkey=repeat_region
NC_003143.1	RefSeq	gene	108358	109593	.	-	.	ID=gene99;Name=YPO0099;Dbxref=GeneID:1172947;gbkey=Gene;locus_tag=YPO0099
NC_003143.1	RefSeq	CDS	108358	109593	.	-	0	ID=cds91;Name=YP_002345189.1;Parent=gene99;Dbxref=InterPro:IPR003997,InterPro:IPR006143,InterPro:IPR006144,InterPro:IPR011053,UniProtKB%2FTrEMBL:Q0WKJ9,Genbank:YP_002345189.1,GeneID:1172947;gbkey=CDS;product=hypothetical protein;protein_id=YP_002345189.1;transl_table=11
NC_003143.1	RefSeq	region	108409	108477	.	-	.	ID=id79;Note=PS00543 HlyD family secretion proteins signature.;Dbxref=GeneID:1172947;gbkey=misc_feature
NC_003143.1	RefSeq	region	109489	109554	.	-	.	ID=id80;Note=1 probable transmembrane helix predicted;Dbxref=GeneID:1172947;gbkey=misc_feature
NC_003143.1	RefSeq	gene	109863	110102	.	+	.	ID=gene100;Name=YPO0100;Dbxref=GeneID:1172948;gbkey=Gene;locus_tag=YPO0100
NC_003143.1	RefSeq	CDS	109863	110102	.	+	0	ID=cds92;Name=YP_002345190.1;Parent=gene100;Note=no significant database hits;Dbxref=UniProtKB%2FTrEMBL:Q7CL23,Genbank:YP_002345190.1,GeneID:1172948;gbkey=CDS;product=hypothetical protein;protein_id=YP_002345190.1;transl_table=11
NC_003143.1	RefSeq	gene	110277	110426	.	+	.	ID=gene101;Name=YPO0101;Dbxref=GeneID:1172949;gbkey=Gene;locus_tag=YPO0101
NC_003143.1	RefSeq	CDS	110277	110426	.	+	0	ID=cds93;Name=YP_002345191.1;Parent=gene101;Note=Doubtful CDS with no significant database hits;Dbxref=UniProtKB%2FTrEMBL:Q7CL22,Genbank:YP_002345191.1,GeneID:1172949;gbkey=CDS;product=hypothetical protein;protein_id=YP_002345191.1;transl_table=11
NC_003143.1	RefSeq	region	110313	110381	.	+	.	ID=id81;Note=1 probable transmembrane helix predicted;Dbxref=GeneID:1172949;gbkey=misc_feature
NC_003143.1	RefSeq	gene	110732	111316	.	+	.	ID=gene102;Name=YPO0102;Dbxref=GeneID:1172950;gbkey=Gene;locus_tag=YPO0102
NC_003143.1	RefSeq	CDS	110732	111316	.	+	0	ID=cds94;Name=YP_002345192.1;Parent=gene102;Note=No significant database hits;Dbxref=UniProtKB%2FTrEMBL:Q0WKJ6,Genbank:YP_002345192.1,GeneID:1172950;gbkey=CDS;product=hypothetical protein;protein_id=YP_002345192.1;transl_table=11
NC_003143.1	RefSeq	region	110750	110818	.	+	.	ID=id82;Note=1 probable transmembrane helix predicted;Dbxref=GeneID:1172950;gbkey=misc_feature
NC_003143.1	RefSeq	gene	111433	111918	.	-	.	ID=gene103;Name=menG;Dbxref=GeneID:1172951;gbkey=Gene;gene=menG;locus_tag=YPO0103
NC_003143.1	RefSeq	CDS	111433	111918	.	-	0	ID=cds95;Name=YP_002345193.1;Parent=gene103;Note=regulator of RNase E%3B increases half-life and abundance of RNAs%3B interacts with RNase E possibly inhibiting catalytic activity;Dbxref=InterPro:IPR005493,InterPro:IPR010203,UniProtKB%2FTrEMBL:Q0WKJ5,Genbank:YP_002345193.1,GeneID:1172951;gbkey=CDS;gene=menG;product=ribonuclease activity regulator protein RraA;protein_id=YP_002345193.1;transl_table=11
NC_003143.1	RefSeq	gene	112060	112977	.	-	.	ID=gene104;Name=menA;Dbxref=GeneID:1172952;gbkey=Gene;gene=menA;locus_tag=YPO0104
NC_003143.1	RefSeq	CDS	112060	112977	.	-	0	ID=cds96;Name=YP_002345194.1;Parent=gene104;Note=catalyzes the formation of dimethylmenaquinone from 1%2C4-dihydroxy-2-naphthoate and octaprenyl diphosphate;Dbxref=InterPro:IPR000537,InterPro:IPR004657,UniProtKB%2FTrEMBL:Q0WKJ4,Genbank:YP_002345194.1,GeneID:1172952;gbkey=CDS;gene=menA;product=1%2C4-dihydroxy-2-naphthoate octaprenyltransferase;protein_id=YP_002345194.1;transl_table=11
NC_003143.1	RefSeq	gene	113213	114544	.	-	.	ID=gene105;Name=hslU;Dbxref=GeneID:1172953;gbkey=Gene;gene=hslU;locus_tag=YPO0105
NC_003143.1	RefSeq	CDS	113213	114544	.	-	0	ID=cds97;Name=YP_002345195.1;Parent=gene105;Note=heat shock protein involved in degradation of misfolded proteins;Dbxref=InterPro:IPR003593,InterPro:IPR004491,InterPro:IPR013093,UniProtKB%2FTrEMBL:Q0WKJ3,Genbank:YP_002345195.1,GeneID:1172953;gbkey=CDS;gene=hslU;product=ATP-dependent protease ATP-binding subunit HslU;protein_id=YP_002345195.1;transl_table=11
NC_003143.1	RefSeq	region	114353	114376	.	-	.	ID=id83;Note=PS00017 ATP%2FGTP-binding site motif A %28P-loop%29.;Dbxref=GeneID:1172953;gbkey=misc_feature;gene=hslU
NC_003143.1	RefSeq	gene	114615	115139	.	-	.	ID=gene106;Name=hslV;Dbxref=GeneID:1172954;gbkey=Gene;gene=hslV;locus_tag=YPO0106
NC_003143.1	RefSeq	CDS	114615	115139	.	-	0	ID=cds98;Name=YP_002345196.1;Parent=gene106;Note=heat shock protein involved in degradation of misfolded proteins;Dbxref=InterPro:IPR001353,UniProtKB%2FTrEMBL:Q0WKJ2,Genbank:YP_002345196.1,GeneID:1172954;gbkey=CDS;gene=hslV;product=ATP-dependent protease peptidase subunit;protein_id=YP_002345196.1;transl_table=11
NC_003143.1	RefSeq	region	114969	115025	.	-	.	ID=id84;Note=1 probable transmembrane helix predicted;Dbxref=GeneID:1172954;gbkey=misc_feature;gene=hslV
NC_003143.1	RefSeq	gene	115239	116084	.	-	.	ID=gene107;Name=ftsN;Dbxref=GeneID:1172955;gbkey=Gene;gene=ftsN;gene_synonym=msgA;locus_tag=YPO0107
NC_003143.1	RefSeq	CDS	115239	116084	.	-	0	ID=cds99;Name=YP_002345197.1;Parent=gene107;Dbxref=InterPro:IPR007730,InterPro:IPR011930,UniProtKB%2FTrEMBL:Q7CL21,Genbank:YP_002345197.1,GeneID:1172955;gbkey=CDS;gene=ftsN;product=cell division protein FtsN;protein_id=YP_002345197.1;transl_table=11
NC_003143.1	RefSeq	gene	116150	117178	.	-	.	ID=gene108;Name=cytR;Dbxref=GeneID:1172956;gbkey=Gene;gene=cytR;locus_tag=YPO0108
NC_003143.1	RefSeq	CDS	116150	117178	.	-	0	ID=cds100;Name=YP_002345198.1;Parent=gene108;Note=negatively controls the transcription initiation of genes such as deoCABD%2C udp%2C and cdd encoding catabolizing enzymes and nupC%2C nupG%2C and tsx encoding transporting and pore-forming proteins;Dbxref=InterPro:IPR000843,InterPro:IPR001761,InterPro:IPR010982,InterPro:IPR011991,UniProtKB%2FTrEMBL:Q7CL20,Genbank:YP_002345198.1,GeneID:1172956;gbkey=CDS;gene=cytR;product=DNA-binding transcriptional regulator CytR;protein_id=YP_002345198.1;transl_table=11
NC_003143.1	RefSeq	gene	117531	119729	.	-	.	ID=gene109;Name=priA;Dbxref=GeneID:1172957;gbkey=Gene;gene=priA;locus_tag=YPO0110
NC_003143.1	RefSeq	CDS	117531	119729	.	-	0	ID=cds101;Name=YP_002345199.1;Parent=gene109;Note=binding of PriA to forked DNA starts the assembly of the primosome%2C also possesses 3%27-5%27 helicase activity;Dbxref=InterPro:IPR001650,InterPro:IPR005259,InterPro:IPR011545,InterPro:IPR014001,InterPro:IPR014021,UniProtKB%2FTrEMBL:Q7CL19,Genbank:YP_002345199.1,GeneID:1172957;gbkey=CDS;gene=priA;product=primosome assembly protein PriA;protein_id=YP_002345199.1;transl_table=11
NC_003143.1	RefSeq	region	119037	119060	.	-	.	ID=id85;Note=PS00017 ATP%2FGTP-binding site motif A %28P-loop%29.;Dbxref=GeneID:1172957;gbkey=misc_feature;gene=priA
NC_003143.1	RefSeq	gene	119972	120187	.	+	.	ID=gene110;Name=rpmE;Dbxref=GeneID:1172958;gbkey=Gene;gene=rpmE;locus_tag=YPO0111
NC_003143.1	RefSeq	CDS	119972	120187	.	+	0	ID=cds102;Name=YP_002345200.1;Parent=gene110;Note=RpmE%3B there appears to be two types of ribosomal proteins L31 in bacterial genomes%3B some contain a CxxC motif while others do not%3B Bacillus subtilis has both types%3B the proteins in this cluster have the CXXC motif%3B RpmE is found in exponentially growing Bacilli while YtiA was found after exponential growth%3B expression of ytiA is controlled by a zinc-specific transcriptional repressor%3B RpmE contains one zinc ion and a CxxC motif is responsible for this binding%3B forms an RNP particle along with proteins L5%2C L18%2C and L25 and 5S rRNA%3B found crosslinked to L2 and L25 and EF-G%3B may be near the peptidyltransferase site of the 50S ribosome;Dbxref=InterPro:IPR002150,UniProtKB%2FTrEMBL:Q0WKI8,Genbank:YP_002345200.1,GeneID:1172958;gbkey=CDS;gene=rpmE;product=50S ribosomal protein L31;protein_id=YP_002345200.1;transl_table=11
NC_003143.1	RefSeq	region	120080	120097	.	+	.	ID=id86;Note=PS00190 Cytochrome c family heme-binding site signature.;Dbxref=GeneID:1172958;gbkey=misc_feature;gene=rpmE
NC_003143.1	RefSeq	region	120092	120148	.	+	.	ID=id87;Note=PS01143 Ribosomal protein L31 signature.;Dbxref=GeneID:1172958;gbkey=misc_feature;gene=rpmE
NC_003143.1	RefSeq	gene	120748	121203	.	-	.	ID=gene111;Name=YPO0112;Dbxref=GeneID:1172959;gbkey=Gene;locus_tag=YPO0112
NC_003143.1	RefSeq	CDS	120748	121203	.	-	0	ID=cds103;Name=YP_002345201.1;Parent=gene111;Dbxref=InterPro:IPR008024,UniProtKB%2FTrEMBL:Q0WKI7,Genbank:YP_002345201.1,GeneID:1172959;gbkey=CDS;product=hypothetical protein;protein_id=YP_002345201.1;transl_table=11
NC_003143.1	RefSeq	gene	121552	121869	.	-	.	ID=gene112;Name=metJ;Dbxref=GeneID:1172961;gbkey=Gene;gene=metJ;locus_tag=YPO0114
NC_003143.1	RefSeq	CDS	121552	121869	.	-	0	ID=cds104;Name=YP_002345203.1;Parent=gene112;Note=when combined with S-adenosylmethionine represses the expression of the methionine regulon and of proteins involved in S-adenosylmethionine synthesis;Dbxref=InterPro:IPR002084,InterPro:IPR010985,UniProtKB%2FTrEMBL:Q0WKI5,Genbank:YP_002345203.1,GeneID:1172961;gbkey=CDS;gene=metJ;product=transcriptional repressor protein MetJ;protein_id=YP_002345203.1;transl_table=11
NC_003143.1	RefSeq	gene	122247	123406	.	+	.	ID=gene113;Name=metB;Dbxref=GeneID:1172962;gbkey=Gene;gene=metB;locus_tag=YPO0115;pseudo=true
NC_003143.1	RefSeq	region	122814	122858	.	+	.	ID=id88;Note=PS00868 Cys%2FMet metabolism enzymes pyridoxal-phosphate attachment site.;Dbxref=GeneID:1172962;gbkey=misc_feature;gene=metB
NC_003143.1	RefSeq	gene	123409	125844	.	+	.	ID=gene114;Name=metL;Dbxref=GeneID:1172963;gbkey=Gene;gene=metL;gene_synonym=metM;locus_tag=YPO0116
NC_003143.1	RefSeq	CDS	123409	125844	.	+	0	ID=cds105;Name=YP_002345204.1;Parent=gene114;Note=multifunctional homodimeric enzyme that catalyzes the phosphorylation of aspartate to form aspartyl-4-phosphate as well as conversion of aspartate semialdehyde to homoserine%3B functions in a number of amino acid biosynthetic pathways;Dbxref=InterPro:IPR001048,InterPro:IPR001341,InterPro:IPR001342,InterPro:IPR005106,InterPro:IPR011147,UniProtKB%2FTrEMBL:Q7CL18,Genbank:YP_002345204.1,GeneID:1172963;gbkey=CDS;gene=metL;product=bifunctional aspartate kinase II%2Fhomoserine dehydrogenase II;protein_id=YP_002345204.1;transl_table=11
NC_003143.1	RefSeq	region	123451	123477	.	+	.	ID=id89;Note=PS00324 Aspartokinase signature.;Dbxref=GeneID:1172963;gbkey=misc_feature;gene=metL
NC_003143.1	RefSeq	region	125371	125439	.	+	.	ID=id90;Note=PS01042 Homoserine dehydrogenase signature.;Dbxref=GeneID:1172963;gbkey=misc_feature;gene=metL
NC_003143.1	RefSeq	gene	126077	126961	.	+	.	ID=gene115;Name=metF;Dbxref=GeneID:1172964;gbkey=Gene;gene=metF;locus_tag=YPO0117
NC_003143.1	RefSeq	CDS	126077	126961	.	+	0	ID=cds106;Name=YP_002345205.1;Parent=gene115;Note=MTHFR%3B catalyzes NADH-linked reduction of 5%2C10-methylenetetrahydrofolate to 5-methyltetrahydrofolate using FAD as a cofactor;Dbxref=InterPro:IPR003171,InterPro:IPR004620,UniProtKB%2FTrEMBL:Q7CL17,Genbank:YP_002345205.1,GeneID:1172964;gbkey=CDS;gene=metF;product=5%2C10-methylenetetrahydrofolate reductase;protein_id=YP_002345205.1;transl_table=11
NC_003143.1	RefSeq	region	127098	128558	.	-	.	ID=id91;Note=IS1397-like insertion element: IS1661.;gbkey=misc_feature
NC_003143.1	RefSeq	repeat_region	127098	127130	.	+	.	ID=id92;Note=Inverted repeat for IS1661 insertion element;gbkey=repeat_region
NC_003143.1	RefSeq	gene	127139	127924	.	-	.	ID=gene116;Name=YPO0118;Dbxref=GeneID:1172965;gbkey=Gene;locus_tag=YPO0118
NC_003143.1	RefSeq	CDS	127139	127924	.	-	0	ID=cds107;Name=YP_002345206.1;Parent=gene116;Dbxref=InterPro:IPR001584,InterPro:IPR012337,UniProtKB%2FTrEMBL:Q7CKI6,Genbank:YP_002345206.1,GeneID:1172965;gbkey=CDS;product=transposase for insertion sequence IS1661;protein_id=YP_002345206.1;transl_table=11
NC_003143.1	RefSeq	gene	127978	128622	.	-	.	ID=gene117;Name=YPO0119;Dbxref=GeneID:1172966;gbkey=Gene;locus_tag=YPO0119
NC_003143.1	RefSeq	CDS	127978	128622	.	-	0	ID=cds108;Name=YP_002345207.2;Parent=gene117;Dbxref=InterPro:IPR002514,InterPro:IPR009057,UniProtKB%2FTrEMBL:Q74RD6,Genbank:YP_002345207.2,GeneID:1172966;gbkey=CDS;product=insertion element DNA-binding protein;protein_id=YP_002345207.2;transl_table=11
NC_003143.1	RefSeq	region	128371	128436	.	-	.	ID=id93;Note=Predicted helix-turn-helix motif with score 1691 %28%2B4.95 SD%29 at aa 20-41%2C sequence ATLRETARQFSVGKSPLTRWIR;Dbxref=GeneID:1172966;gbkey=misc_feature
NC_003143.1	RefSeq	repeat_region	128526	128558	.	-	.	ID=id94;Note=Inverted repeat for IS1661 insertion element;Dbxref=GeneID:1172966;gbkey=repeat_region
NC_003143.1	RefSeq	gene	128686	129444	.	-	.	ID=gene118;Name=glpR;Dbxref=GeneID:1172967;gbkey=Gene;gene=glpR;locus_tag=YPO0120
NC_003143.1	RefSeq	CDS	128686	129444	.	-	0	ID=cds109;Name=YP_002345208.1;Parent=gene118;Note=represses the glpD%2C glpFK%2C glpTQ%2C and glpACB operons involved in glycerol-3-phosphate metabolism;Dbxref=InterPro:IPR001034,InterPro:IPR011991,UniProtKB%2FTrEMBL:Q7CFX9,Genbank:YP_002345208.1,GeneID:1172967;gbkey=CDS;gene=glpR;product=DNA-binding transcriptional repressor GlpR;protein_id=YP_002345208.1;transl_table=11
NC_003143.1	RefSeq	region	129322	129387	.	-	.	ID=id95;Note=Predicted helix-turn-helix motif with score 1448 %28%2B4.12 SD%29 at aa 20-41%2C sequence VSTEELVEHFAVSPQTIRRDLN;Dbxref=GeneID:1172967;gbkey=misc_feature;gene=glpR
NC_003143.1	RefSeq	region	129325	129429	.	-	.	ID=id96;Note=PS00894 Bacterial regulatory proteins%2C deoR family signature.;Dbxref=GeneID:1172967;gbkey=misc_feature;gene=glpR
NC_003143.1	RefSeq	gene	129479	130315	.	-	.	ID=gene119;Name=glpG;Dbxref=GeneID:1172968;gbkey=Gene;gene=glpG;locus_tag=YPO0121
NC_003143.1	RefSeq	CDS	129479	130315	.	-	0	ID=cds110;Name=YP_002345209.1;Parent=gene119;Note=protease responsible for the cleavage between Ser and Asp residues of proteins in regions of high local hydrophilicity;Dbxref=InterPro:IPR002610,UniProtKB%2FTrEMBL:Q7CFX8,Genbank:YP_002345209.1,GeneID:1172968;gbkey=CDS;gene=glpG;product=intramembrane serine protease GlpG;protein_id=YP_002345209.1;transl_table=11
NC_003143.1	RefSeq	gene	130333	130662	.	-	.	ID=gene120;Name=glpE;Dbxref=GeneID:1172969;gbkey=Gene;gene=glpE;locus_tag=YPO0122
NC_003143.1	RefSeq	CDS	130333	130662	.	-	0	ID=cds111;Name=YP_002345210.1;Parent=gene120;Note=belongs to rhodanese family%3B thiosulfate thiotransferase%3B in Escherichia coli this enzyme catalyzes the formation of thiocyanate from thiosulfate and cyanide with low efficiency%3B contains an active site cysteine;Dbxref=InterPro:IPR001763,UniProtKB%2FTrEMBL:Q0WKH8,Genbank:YP_002345210.1,GeneID:1172969;gbkey=CDS;gene=glpE;product=thiosulfate sulfurtransferase;protein_id=YP_002345210.1;transl_table=11
NC_003143.1	RefSeq	gene	131037	133748	.	-	.	ID=gene121;Name=malT;Dbxref=GeneID:1172970;gbkey=Gene;gene=malT;locus_tag=YPO0123
NC_003143.1	RefSeq	CDS	131037	133748	.	-	0	ID=cds112;Name=YP_002345211.1;Parent=gene121;Note=Positively regulates the transcription of the maltose regulon whose gene products are responsible for uptake and catabolism of malto-oligosaccharides;Dbxref=InterPro:IPR000792,InterPro:IPR011990,InterPro:IPR011991,UniProtKB%2FTrEMBL:Q0WKH7,Genbank:YP_002345211.1,GeneID:1172970;gbkey=CDS;gene=malT;product=transcriptional regulator MalT;protein_id=YP_002345211.1;transl_table=11
NC_003143.1	RefSeq	region	131109	131192	.	-	.	ID=id97;Note=PS00622 Bacterial regulatory proteins%2C luxR family signature.;Dbxref=GeneID:1172970;gbkey=misc_feature;gene=malT
NC_003143.1	RefSeq	gene	134066	136470	.	+	.	ID=gene122;Name=malP;Dbxref=GeneID:1172971;gbkey=Gene;gene=malP;locus_tag=YPO0124;pseudo=true
NC_003143.1	RefSeq	region	135991	136029	.	+	.	ID=id98;Note=PS00102 Phosphorylase pyridoxal-phosphate attachment site.;Dbxref=GeneID:1172971;gbkey=misc_feature;gene=malP
NC_003143.1	RefSeq	gene	136483	138579	.	+	.	ID=gene123;Name=malQ;Dbxref=GeneID:1172972;gbkey=Gene;gene=malQ;locus_tag=YPO0126
NC_003143.1	RefSeq	CDS	136483	138579	.	+	0	ID=cds113;Name=YP_002345212.1;Parent=gene123;Note=amylomaltase%3B acts to release glucose from maltodextrins;Dbxref=InterPro:IPR003385,InterPro:IPR013781,UniProtKB%2FTrEMBL:Q7CFX4,Genbank:YP_002345212.1,GeneID:1172972;gbkey=CDS;gene=malQ;product=4-alpha-glucanotransferase;protein_id=YP_002345212.1;transl_table=11
NC_003143.1	RefSeq	gene	138908	139483	.	-	.	ID=gene124;Name=YPO0127;Dbxref=GeneID:1172973;gbkey=Gene;locus_tag=YPO0127
NC_003143.1	RefSeq	CDS	138908	139483	.	-	0	ID=cds114;Name=YP_002345213.1;Parent=gene124;Note=cytoplasmic protein that may be involved in the utilization of double-stranded DNA as a carbon source;Dbxref=InterPro:IPR000361,InterPro:IPR001075,UniProtKB%2FTrEMBL:Q0WKH5,Genbank:YP_002345213.1,GeneID:1172973;gbkey=CDS;product=DNA uptake protein;protein_id=YP_002345213.1;transl_table=11
NC_003143.1	RefSeq	region	139037	139069	.	-	.	ID=id99;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site.;Dbxref=GeneID:1172973;gbkey=misc_feature
NC_003143.1	RefSeq	gene	139543	140244	.	-	.	ID=gene125;Name=YPO0128;Dbxref=GeneID:1172974;gbkey=Gene;locus_tag=YPO0128
NC_003143.1	RefSeq	CDS	139543	140244	.	-	0	ID=cds115;Name=YP_002345214.1;Parent=gene125;Note=involved in high-affinity gluconate transport;Dbxref=InterPro:IPR000836,UniProtKB%2FTrEMBL:Q7CFX6,Genbank:YP_002345214.1,GeneID:1172974;gbkey=CDS;product=gluconate periplasmic binding protein;protein_id=YP_002345214.1;transl_table=11
NC_003143.1	RefSeq	gene	140331	141107	.	+	.	ID=gene126;Name=bioH;Dbxref=GeneID:1172975;gbkey=Gene;gene=bioH;locus_tag=YPO0129
NC_003143.1	RefSeq	CDS	140331	141107	.	+	0	ID=cds116;Name=YP_002345215.1;Parent=gene126;Dbxref=InterPro:IPR000073,InterPro:IPR010076,UniProtKB%2FTrEMBL:Q0WKH3,Genbank:YP_002345215.1,GeneID:1172975;gbkey=CDS;gene=bioH;product=biotin biosynthesis protein;protein_id=YP_002345215.1;transl_table=11
NC_003143.1	RefSeq	gene	141277	141546	.	+	.	ID=gene127;Name=YPO0130;Dbxref=GeneID:1172976;gbkey=Gene;locus_tag=YPO0130
NC_003143.1	RefSeq	CDS	141277	141546	.	+	0	ID=cds117;Name=YP_002345216.1;Parent=gene127;Dbxref=InterPro:IPR010854,UniProtKB%2FTrEMBL:Q0WKH2,Genbank:YP_002345216.1,GeneID:1172976;gbkey=CDS;product=hypothetical protein;protein_id=YP_002345216.1;transl_table=11
NC_003143.1	RefSeq	gene	141684	141941	.	-	.	ID=gene128;Name=YPO0131;Dbxref=GeneID:1172977;gbkey=Gene;locus_tag=YPO0131
NC_003143.1	RefSeq	CDS	141684	141941	.	-	0	ID=cds118;Name=YP_002345217.1;Parent=gene128;Dbxref=UniProtKB%2FTrEMBL:Q7CFX5,Genbank:YP_002345217.1,GeneID:1172977;gbkey=CDS;product=hypothetical protein;protein_id=YP_002345217.1;transl_table=11
NC_003143.1	RefSeq	gene	141977	144292	.	-	.	ID=gene129;Name=feoB;Dbxref=GeneID:1172978;gbkey=Gene;gene=feoB;locus_tag=YPO0132
NC_003143.1	RefSeq	CDS	141977	144292	.	-	0	ID=cds119;Name=YP_002345218.1;Parent=gene129;Note=cytoplasmic membrane ferrous uptake system permease%3B mutations disrupt the ability of Escherichia coli to take up ferrous iron%3B GTP-binding protein which requires GTP for efficient iron%28II%29 uptake;Dbxref=InterPro:IPR002917,InterPro:IPR003373,InterPro:IPR005225,InterPro:IPR011619,InterPro:IPR011640,InterPro:IPR011642,UniProtKB%2FTrEMBL:Q74Y42,Genbank:YP_002345218.1,GeneID:1172978;gbkey=CDS;gene=feoB;product=ferrous iron transport protein B;protein_id=YP_002345218.1;transl_table=11
NC_003143.1	RefSeq	region	143111	143134	.	-	.	ID=id100;Note=PS00017 ATP%2FGTP-binding site motif A %28P-loop%29.;Dbxref=GeneID:1172978;gbkey=misc_feature;gene=feoB
NC_003143.1	RefSeq	region	144242	144265	.	-	.	ID=id101;Note=PS00017 ATP%2FGTP-binding site motif A %28P-loop%29.;Dbxref=GeneID:1172978;gbkey=misc_feature;gene=feoB
NC_003143.1	RefSeq	gene	144384	144611	.	-	.	ID=gene130;Name=feoA;Dbxref=GeneID:1172979;gbkey=Gene;gene=feoA;locus_tag=YPO0133
NC_003143.1	RefSeq	CDS	144384	144611	.	-	0	ID=cds120;Name=YP_002345219.1;Parent=gene130;Dbxref=InterPro:IPR007167,InterPro:IPR008988,UniProtKB%2FTrEMBL:Q7CFX2,Genbank:YP_002345219.1,GeneID:1172979;gbkey=CDS;gene=feoA;product=ferrous iron transport protein A;protein_id=YP_002345219.1;transl_table=11
NC_003143.1	RefSeq	gene	145135	147510	.	-	.	ID=gene131;Name=YPO0134;Dbxref=GeneID:1172980;gbkey=Gene;locus_tag=YPO0134
NC_003143.1	RefSeq	CDS	145135	147510	.	-	0	ID=cds121;Name=YP_002345220.1;Parent=gene131;Dbxref=InterPro:IPR003029,InterPro:IPR003583,InterPro:IPR006641,InterPro:IPR008994,InterPro:IPR012340,UniProtKB%2FTrEMBL:Q7CFX1,Genbank:YP_002345220.1,GeneID:1172980;gbkey=CDS;product=hypothetical protein;protein_id=YP_002345220.1;transl_table=11
NC_003143.1	RefSeq	gene	148044	148559	.	+	.	ID=gene132;Name=greB;Dbxref=GeneID:1172981;gbkey=Gene;gene=greB;locus_tag=YPO0135
NC_003143.1	RefSeq	CDS	148044	148559	.	+	0	ID=cds122;Name=YP_002345221.1;Parent=gene132;Note=necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites%3B arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through%2C resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3%27terminus;Dbxref=InterPro:IPR001437,InterPro:IPR006358,InterPro:IPR012243,UniProtKB%2FTrEMBL:Q0WKG7,Genbank:YP_002345221.1,GeneID:1172981;gbkey=CDS;gene=greB;product=transcription elongation factor GreB;protein_id=YP_002345221.1;transl_table=11
NC_003143.1	RefSeq	region	148065	148190	.	+	.	ID=id102;Note=PS00829 Prokaryotic transcription elongation factors signature 1.;Dbxref=GeneID:1172981;gbkey=misc_feature;gene=greB
NC_003143.1	RefSeq	region	148401	148451	.	+	.	ID=id103;Note=PS00830 Prokaryotic transcription elongation factors signature 2.;Dbxref=GeneID:1172981;gbkey=misc_feature;gene=greB
NC_003143.1	RefSeq	gene	148695	149414	.	+	.	ID=gene133;Name=ompR;Dbxref=GeneID:1172982;gbkey=Gene;gene=ompR;gene_synonym=ompB,ompR;locus_tag=YPO0136
NC_003143.1	RefSeq	CDS	148695	149414	.	+	0	ID=cds123;Name=YP_002345222.1;Parent=gene133;Note=part of two-component system EnvZ%2FOmpR%3B regulates transcription of outer membrane porin genes ompC%2FF%3B under high osmolarity EnvZ functions as kinase%2Fphosphotransferase and phosphorylates OmpR%3B the result is increased expression of ompC and repression of ompF%3B also functions in regulation of other genes%3B forms dimers upon phosphorylation;Dbxref=InterPro:IPR001789,InterPro:IPR001867,InterPro:IPR011006,InterPro:IPR011991,UniProtKB%2FTrEMBL:Q7CFX0,Genbank:YP_002345222.1,GeneID:1172982;gbkey=CDS;gene=ompR;product=osmolarity response regulator;protein_id=YP_002345222.1;transl_table=11
NC_003143.1	RefSeq	gene	149411	150763	.	+	.	ID=gene134;Name=envZ;Dbxref=GeneID:1172983;gbkey=Gene;gene=envZ;gene_synonym=ompB,perA,tpo;locus_tag=YPO0137
NC_003143.1	RefSeq	CDS	149411	150763	.	+	0	ID=cds124;Name=YP_002345223.1;Parent=gene134;Note=membrane-localized osmosensor%3B histidine kinase%3B in high osmolarity EnvZ autophosphorylates itself and transfers phosphoryl group to OmpR;Dbxref=InterPro:IPR003594,InterPro:IPR003660,InterPro:IPR003661,InterPro:IPR004358,InterPro:IPR005467,InterPro:IPR009082,UniProtKB%2FTrEMBL:Q7CFW9,Genbank:YP_002345223.1,GeneID:1172983;gbkey=CDS;gene=envZ;product=osmolarity sensor protein;protein_id=YP_002345223.1;transl_table=11
NC_003143.1	RefSeq	region	149447	149494	.	+	.	ID=id104;Note=PS00038 Myc-type%2C %27helix-loop-helix%27 dimerization domain signature.;Dbxref=GeneID:1172983;gbkey=misc_feature;gene=envZ
NC_003143.1	RefSeq	gene	150898	152517	.	-	.	ID=gene135;Name=pckA;Dbxref=GeneID:1172984;gbkey=Gene;gene=pckA;locus_tag=YPO0138
NC_003143.1	RefSeq	CDS	150898	152517	.	-	0	ID=cds125;Name=YP_002345224.1;Parent=gene135;Note=PEP carboxykinase%3B PEP carboxylase%3B PEPCK%3B catalyzes the phosphorylation and decarboxylation of oxaloacetate to form phosphoenolpyruvate using ATP;Dbxref=InterPro:IPR001272,InterPro:IPR008210,UniProtKB%2FTrEMBL:Q0WKG4,Genbank:YP_002345224.1,GeneID:1172984;gbkey=CDS;gene=pckA;product=phosphoenolpyruvate carboxykinase;protein_id=YP_002345224.1;transl_table=11
NC_003143.1	RefSeq	region	151681	151728	.	-	.	ID=id105;Note=PS00532 Phosphoenolpyruvate carboxykinase %28ATP%29 signature.;Dbxref=GeneID:1172984;gbkey=misc_feature;gene=pckA
NC_003143.1	RefSeq	region	151756	151779	.	-	.	ID=id106;Note=PS00017 ATP%2FGTP-binding site motif A %28P-loop%29.;Dbxref=GeneID:1172984;gbkey=misc_feature;gene=pckA
NC_003143.1	RefSeq	gene	152714	153595	.	-	.	ID=gene136;Name=hslO;Dbxref=GeneID:1172985;gbkey=Gene;gene=hslO;locus_tag=YPO0139
NC_003143.1	RefSeq	CDS	152714	153595	.	-	0	ID=cds126;Name=YP_002345225.1;Parent=gene136;Note=becomes active under oxidative stress%3B four conserved cysteines bind a zinc atom when they are in the reduced state and the enzyme is inactive%3B oxidative stress results in oxidized cysteines%2C release of zinc%2C and binding of Hsp33 to aggregation-prone proteins%3B forms dimers and higher order oligomers;Dbxref=InterPro:IPR000397,UniProtKB%2FTrEMBL:Q0WKG3,Genbank:YP_002345225.1,GeneID:1172985;gbkey=CDS;gene=hslO;product=heat shock protein 33;protein_id=YP_002345225.1;transl_table=11
NC_003143.1	RefSeq	gene	153758	154165	.	-	.	ID=gene137;Name=hslR;Dbxref=GeneID:1172986;gbkey=Gene;gene=hslR;locus_tag=YPO0140
NC_003143.1	RefSeq	CDS	153758	154165	.	-	0	ID=cds127;Name=YP_002345226.1;Parent=gene137;Dbxref=InterPro:IPR002942,UniProtKB%2FTrEMBL:Q7CFW8,Genbank:YP_002345226.1,GeneID:1172986;gbkey=CDS;gene=hslR;product=heat shock protein 15;protein_id=YP_002345226.1;transl_table=11
NC_003143.1	RefSeq	gene	154194	154874	.	-	.	ID=gene138;Name=YPO0141;Dbxref=GeneID:1172987;gbkey=Gene;locus_tag=YPO0141
NC_003143.1	RefSeq	CDS	154194	154874	.	-	0	ID=cds128;Name=YP_002345227.1;Parent=gene138;Dbxref=InterPro:IPR005833,InterPro:IPR005834,InterPro:IPR006402,UniProtKB%2FTrEMBL:Q7CFW7,Genbank:YP_002345227.1,GeneID:1172987;gbkey=CDS;product=hypothetical protein;protein_id=YP_002345227.1;transl_table=11
NC_003143.1	RefSeq	gene	155018	157165	.	-	.	ID=gene139;Name=YPO0142;Dbxref=GeneID:1172988;gbkey=Gene;locus_tag=YPO0142
NC_003143.1	RefSeq	CDS	155018	157165	.	-	0	ID=cds129;Name=YP_002345228.1;Parent=gene139;Dbxref=InterPro:IPR010771,UniProtKB%2FTrEMBL:Q0WKG0,Genbank:YP_002345228.1,GeneID:1172988;gbkey=CDS;product=hypothetical protein;protein_id=YP_002345228.1;transl_table=11
NC_003143.1	RefSeq	gene	157752	158297	.	+	.	ID=gene140;Name=nudE;Dbxref=GeneID:1172990;gbkey=Gene;gene=nudE;locus_tag=YPO0144
NC_003143.1	RefSeq	CDS	157752	158297	.	+	0	ID=cds130;Name=YP_002345230.1;Parent=gene140;Note=ADP-sugar pyrophosphatase%3B catalyzes the formation of D-ribose 5-phosphate from ADP-ribose%3B can also act on ADP-mannose and ADP-glucose;Dbxref=InterPro:IPR000086,UniProtKB%2FTrEMBL:Q7CFW6,Genbank:YP_002345230.1,GeneID:1172990;gbkey=CDS;gene=nudE;product=ADP-ribose diphosphatase NudE;protein_id=YP_002345230.1;transl_table=11
NC_003143.1	RefSeq	region	157986	158045	.	+	.	ID=id107;Note=PS00893 mutT domain signature.;Dbxref=GeneID:1172990;gbkey=misc_feature;gene=nudE
NC_003143.1	RefSeq	gene	158433	160988	.	-	.	ID=gene141;Name=mrcA;Dbxref=GeneID:1172991;gbkey=Gene;gene=mrcA;gene_synonym=ponA;locus_tag=YPO0145
NC_003143.1	RefSeq	CDS	158433	160988	.	-	0	ID=cds131;Name=YP_002345231.1;Parent=gene141;Note=bifunctional murein transglycosylase%2Fmurein transpeptidase%3B penicillin-binding protein 1A%3B involved in the synthesis of cross-linked peptidoglycan from the lipid intermediates in cell wall formation%3B penicillin-insensitive transglycosylase catalyzes the formation of linear glycan strands and the penicillin-sensitive transpeptidase catalyzes the cross-linking of the peptide subunits;Dbxref=InterPro:IPR001264,InterPro:IPR001460,InterPro:IPR011816,InterPro:IPR012338,UniProtKB%2FTrEMBL:Q74Y33,Genbank:YP_002345231.1,GeneID:1172991;gbkey=CDS;gene=mrcA;product=peptidoglycan synthetase;protein_id=YP_002345231.1;transl_table=11
NC_003143.1	RefSeq	gene	161063	162004	.	+	.	ID=gene142;Name=YPO0146;Dbxref=GeneID:1172992;gbkey=Gene;locus_tag=YPO0146
NC_003143.1	RefSeq	CDS	161063	162004	.	+	0	ID=cds132;Name=YP_002345232.1;Parent=gene142;Dbxref=UniProtKB%2FTrEMBL:Q7CFW5,Genbank:YP_002345232.1,GeneID:1172992;gbkey=CDS;product=hypothetical protein;protein_id=YP_002345232.1;transl_table=11
NC_003143.1	RefSeq	gene	162004	162609	.	+	.	ID=gene143;Name=YPO0147;Dbxref=GeneID:1172993;gbkey=Gene;locus_tag=YPO0147
NC_003143.1	RefSeq	CDS	162004	162609	.	+	0	ID=cds133;Name=YP_002345233.1;Parent=gene143;Dbxref=InterPro:IPR007813,UniProtKB%2FTrEMBL:Q0WKF5,Genbank:YP_002345233.1,GeneID:1172993;gbkey=CDS;product=hypothetical protein;protein_id=YP_002345233.1;transl_table=11
NC_003143.1	RefSeq	region	162061	162129	.	+	.	ID=id108;Note=1 probable transmembrane helix predicted;Dbxref=GeneID:1172993;gbkey=misc_feature
NC_003143.1	RefSeq	gene	162602	163183	.	+	.	ID=gene144;Name=YPO0148;Dbxref=GeneID:1172994;gbkey=Gene;locus_tag=YPO0148
NC_003143.1	RefSeq	CDS	162602	163183	.	+	0	ID=cds134;Name=YP_002345234.1;Parent=gene144;Note=No significant database hits;Dbxref=InterPro:IPR006052,UniProtKB%2FTrEMBL:Q0WKF4,Genbank:YP_002345234.1,GeneID:1172994;gbkey=CDS;product=hypothetical protein;protein_id=YP_002345234.1;transl_table=11
NC_003143.1	RefSeq	region	162638	162706	.	+	.	ID=id109;Note=1 probable transmembrane helix predicted;Dbxref=GeneID:1172994;gbkey=misc_feature
NC_003143.1	RefSeq	gene	163209	163577	.	+	.	ID=gene145;Name=YPO0149;Dbxref=GeneID:1172995;gbkey=Gene;locus_tag=YPO0149
NC_003143.1	RefSeq	CDS	163209	163577	.	+	0	ID=cds135;Name=YP_002345235.1;Parent=gene145;Note=Doubtful CDS%2C no significant database hits;Dbxref=UniProtKB%2FTrEMBL:Q0WKF3,Genbank:YP_002345235.1,GeneID:1172995;gbkey=CDS;product=hypothetical protein;protein_id=YP_002345235.1;transl_table=11
NC_003143.1	RefSeq	gene	164004	165128	.	+	.	ID=gene146;Name=hofQ;Dbxref=GeneID:1172996;gbkey=Gene;gene=hofQ;locus_tag=YPO0150
NC_003143.1	RefSeq	CDS	164004	165128	.	+	0	ID=cds136;Name=YP_002345236.1;Parent=gene146;Note=outer membrane porin probably involved in uptake of extracellular double-stranded DNA%3B similar to outer membrane competence protein ComE from Haemophilus influenzae and outer membrane protein PilQ involved in type IV pilus production from Pseudomonas aeruginosa;Dbxref=InterPro:IPR001775,InterPro:IPR001814,InterPro:IPR004846,InterPro:IPR005644,InterPro:IPR011662,InterPro:IPR013355,UniProtKB%2FTrEMBL:Q7CFW4,Genbank:YP_002345236.1,GeneID:1172996;gbkey=CDS;gene=hofQ;product=porin;protein_id=YP_002345236.1;transl_table=11
NC_003143.1	RefSeq	gene	165477	165998	.	+	.	ID=gene147;Name=aroK;Dbxref=GeneID:1172997;gbkey=Gene;gene=aroK;locus_tag=YPO0151
NC_003143.1	RefSeq	CDS	165477	165998	.	+	0	ID=cds137;Name=YP_002345237.1;Parent=gene147;Note=type I enzyme similar to type II but differentially regulated%3B major shikimate kinase in fully repressed cells%3B catalyzes the formation of shikimate 3-phosphate from shikimate in aromatic amino acid biosynthesis;Dbxref=InterPro:IPR000623,UniProtKB%2FTrEMBL:Q0WKF1,Genbank:YP_002345237.1,GeneID:1172997;gbkey=CDS;gene=aroK;product=shikimate kinase I;protein_id=YP_002345237.1;transl_table=11
NC_003143.1	RefSeq	region	165507	165530	.	+	.	ID=id110;Note=PS00017 ATP%2FGTP-binding site motif A %28P-loop%29.;Dbxref=GeneID:1172997;gbkey=misc_feature;gene=aroK
NC_003143.1	RefSeq	region	165654	165731	.	+	.	ID=id111;Note=PS01128 Shikimate kinase signature.;Dbxref=GeneID:1172997;gbkey=misc_feature;gene=aroK
NC_003143.1	RefSeq	gene	166055	167143	.	+	.	ID=gene148;Name=aroB;Dbxref=GeneID:1172998;gbkey=Gene;gene=aroB;locus_tag=YPO0152
NC_003143.1	RefSeq	CDS	166055	167143	.	+	0	ID=cds138;Name=YP_002345238.1;Parent=gene148;Note=catalyzes the formation of 3-dehydroquinate from 3-deoxy-arabino-heptulonate 7-phosphate%3B functions in aromatic amino acid biosynthesis;Dbxref=InterPro:IPR002658,UniProtKB%2FTrEMBL:Q0WKF0,Genbank:YP_002345238.1,GeneID:1172998;gbkey=CDS;gene=aroB;product=3-dehydroquinate synthase;protein_id=YP_002345238.1;transl_table=11
NC_003143.1	RefSeq	gene	167397	168386	.	+	.	ID=gene149;Name=YPO0153;Dbxref=GeneID:1172999;gbkey=Gene;locus_tag=YPO0153
NC_003143.1	RefSeq	CDS	167397	168386	.	+	0	ID=cds139;Name=YP_002345239.1;Parent=gene149;Dbxref=InterPro:IPR007730,UniProtKB%2FTrEMBL:Q74Y26,Genbank:YP_002345239.1,GeneID:1172999;gbkey=CDS;product=hypothetical protein;protein_id=YP_002345239.1;transl_table=11
NC_003143.1	RefSeq	region	167502	167570	.	+	.	ID=id112;Note=1 probable transmembrane helix predicted;Dbxref=GeneID:1172999;gbkey=misc_feature
NC_003143.1	RefSeq	gene	168470	169285	.	+	.	ID=gene150;Name=dam;Dbxref=GeneID:1173000;gbkey=Gene;gene=dam;locus_tag=YPO0154
NC_003143.1	RefSeq	CDS	168470	169285	.	+	0	ID=cds140;Name=YP_002345240.1;Parent=gene150;Dbxref=InterPro:IPR002052,InterPro:IPR002294,InterPro:IPR012263,InterPro:IPR012326,InterPro:IPR012327,UniProtKB%2FTrEMBL:Q7CFW3,Genbank:YP_002345240.1,GeneID:1173000;gbkey=CDS;gene=dam;product=DNA adenine methylase;protein_id=YP_002345240.1;transl_table=11
NC_003143.1	RefSeq	region	169001	169021	.	+	.	ID=id113;Note=PS00092 N-6 Adenine-specific DNA methylases signature.;Dbxref=GeneID:1173000;gbkey=misc_feature;gene=dam
NC_003143.1	RefSeq	gene	169588	170265	.	+	.	ID=gene151;Name=rpe;Dbxref=GeneID:1173001;gbkey=Gene;gene=rpe;locus_tag=YPO0155
NC_003143.1	RefSeq	CDS	169588	170265	.	+	0	ID=cds141;Name=YP_002345241.1;Parent=gene151;Dbxref=InterPro:IPR000056,InterPro:IPR011060,UniProtKB%2FTrEMBL:Q0WKE7,Genbank:YP_002345241.1,GeneID:1173001;gbkey=CDS;gene=rpe;product=ribulose-phosphate 3-epimerase;protein_id=YP_002345241.1;transl_table=11
NC_003143.1	RefSeq	region	169684	169728	.	+	.	ID=id114;Note=PS01085 Ribulose-phosphate 3-epimerase family signature 1.;Dbxref=GeneID:1173001;gbkey=misc_feature;gene=rpe
NC_003143.1	RefSeq	region	169993	170061	.	+	.	ID=id115;Note=PS01086 Ribulose-phosphate 3-epimerase family signature 2.;Dbxref=GeneID:1173001;gbkey=misc_feature;gene=rpe
NC_003143.1	RefSeq	gene	170258	170956	.	+	.	ID=gene152;Name=gph;Dbxref=GeneID:1173002;gbkey=Gene;gene=gph;locus_tag=YPO0156
NC_003143.1	RefSeq	CDS	170258	170956	.	+	0	ID=cds142;Name=YP_002345242.1;Parent=gene152;Note=catalyzes the dephosphorylation of 2-phosphoglycolate to form glycolate and phosphate;Dbxref=InterPro:IPR005833,InterPro:IPR005834,InterPro:IPR006346,InterPro:IPR006402,InterPro:IPR006439,UniProtKB%2FTrEMBL:Q0WKE6,Genbank:YP_002345242.1,GeneID:1173002;gbkey=CDS;gene=gph;product=phosphoglycolate phosphatase;protein_id=YP_002345242.1;transl_table=11
NC_003143.1	RefSeq	gene	170958	171998	.	+	.	ID=gene153;Name=trpS;Dbxref=GeneID:1173003;gbkey=Gene;gene=trpS;locus_tag=YPO0157
NC_003143.1	RefSeq	CDS	170958	171998	.	+	0	ID=cds143;Name=YP_002345243.1;Parent=gene153;Note=catalyzes a two-step reaction%2C first charging a tryptophan molecule by linking its carboxyl group to the alpha-phosphate of ATP%2C followed by transfer of the aminoacyl-adenylate to its tRNA;Dbxref=InterPro:IPR001412,InterPro:IPR002305,InterPro:IPR002306,UniProtKB%2FTrEMBL:Q0WKE5,Genbank:YP_002345243.1,GeneID:1173003;gbkey=CDS;gene=trpS;product=tryptophanyl-tRNA synthetase;protein_id=YP_002345243.1;transl_table=11
NC_003143.1	RefSeq	region	171027	171056	.	+	.	ID=id116;Note=PS00178 Aminoacyl-transfer RNA synthetases class-I signature.;Dbxref=GeneID:1173003;gbkey=misc_feature;gene=trpS
NC_003143.1	RefSeq	repeat_region	172072	172158	.	+	.	ID=id117;Note=5 x 18bp repeats;gbkey=repeat_region
NC_003143.1	RefSeq	gene	172153	173565	.	-	.	ID=gene154;Name=cysG;Dbxref=GeneID:1173004;gbkey=Gene;gene=cysG;locus_tag=YPO0158
NC_003143.1	RefSeq	CDS	172153	173565	.	-	0	ID=cds144;Name=YP_002345244.1;Parent=gene154;Note=multifunction enzyme consisting of uroporphyrin-III C-methyltransferase%2C precorrin-2 dehydrogenase and sirohydrochlorin ferrochelatase%3B catalyzes the methylation of uroporphyrinogen III to form precorrin-2%2C then catalyzes formation of sirohydrochlorin from precorrin-2 and finally catalyzed the formation of siroheme from sirohydrochlorin;Dbxref=InterPro:IPR000878,InterPro:IPR003043,InterPro:IPR006366,InterPro:IPR006367,InterPro:IPR012409,UniProtKB%2FTrEMBL:Q74Y23,Genbank:YP_002345244.1,GeneID:1173004;gbkey=CDS;gene=cysG;product=siroheme synthase;protein_id=YP_002345244.1;transl_table=11
NC_003143.1	RefSeq	region	172588	172689	.	-	.	ID=id118;Note=PS00840 Uroporphyrin-III C-methyltransferase signature 2.;Dbxref=GeneID:1173004;gbkey=misc_feature;gene=cysG
NC_003143.1	RefSeq	region	172870	172914	.	-	.	ID=id119;Note=PS00839 Uroporphyrin-III C-methyltransferase signature 1.;Dbxref=GeneID:1173004;gbkey=misc_feature;gene=cysG
NC_003143.1	RefSeq	gene	173653	174459	.	-	.	ID=gene155;Name=nirC;Dbxref=GeneID:1173005;gbkey=Gene;gene=nirC;locus_tag=YPO0159
NC_003143.1	RefSeq	CDS	173653	174459	.	-	0	ID=cds145;Name=YP_002345245.1;Parent=gene155;Note=member of the FNT family of formate and nitrite transporters;Dbxref=InterPro:IPR000292,UniProtKB%2FTrEMBL:Q7CFW2,Genbank:YP_002345245.1,GeneID:1173005;gbkey=CDS;gene=nirC;product=nitrite transporter NirC;protein_id=YP_002345245.1;transl_table=11
NC_003143.1	RefSeq	region	173959	173991	.	-	.	ID=id120;Note=PS01006 Formate and nitrite transporters signature 2.;Dbxref=GeneID:1173005;gbkey=misc_feature;gene=nirC
NC_003143.1	RefSeq	region	174214	174243	.	-	.	ID=id121;Note=PS01005 Formate and nitrite transporters signature 1.;Dbxref=GeneID:1173005;gbkey=misc_feature;gene=nirC
NC_003143.1	RefSeq	gene	174662	174988	.	-	.	ID=gene156;Name=nirD;Dbxref=GeneID:1173006;gbkey=Gene;gene=nirD;locus_tag=YPO0160
NC_003143.1	RefSeq	CDS	174662	174988	.	-	0	ID=cds146;Name=YP_002345246.1;Parent=gene156;Note=involved in reducing nitrite to ammonium to detoxify nitrite accumulation in anaerobic nitrate-respiring cells and regenerate NAD%2B%3B bounds to NirB%2C the cytoplasmic subunit%2C whose expression is induced at high nitrate concentrations;Dbxref=InterPro:IPR012748,UniProtKB%2FTrEMBL:Q7CFW1,Genbank:YP_002345246.1,GeneID:1173006;gbkey=CDS;gene=nirD;product=nitrite reductase small subunit;protein_id=YP_002345246.1;transl_table=11
NC_003143.1	RefSeq	gene	174985	177531	.	-	.	ID=gene157;Name=nirB;Dbxref=GeneID:1173007;gbkey=Gene;gene=nirB;locus_tag=YPO0161
NC_003143.1	RefSeq	CDS	174985	177531	.	-	0	ID=cds147;Name=YP_002345247.1;Parent=gene157;Dbxref=InterPro:IPR001100,InterPro:IPR001327,InterPro:IPR005117,InterPro:IPR006066,InterPro:IPR006067,InterPro:IPR007419,InterPro:IPR011255,InterPro:IPR012744,InterPro:IPR013027,UniProtKB%2FTrEMBL:Q7CFW0,Genbank:YP_002345247.1,GeneID:1173007;gbkey=CDS;gene=nirB;product=nitrite reductase;protein_id=YP_002345247.1;transl_table=11
NC_003143.1	RefSeq	region	175450	175500	.	-	.	ID=id122;Note=PS00365 Nitrite and sulfite reductases iron-sulfur%2Fsiroheme-binding site.;Dbxref=GeneID:1173007;gbkey=misc_feature;gene=nirB
NC_003143.1	RefSeq	region	175648	175683	.	-	.	ID=id123;Note=PS00136 Serine proteases%2C subtilase family%2C aspartic acid active site.;Dbxref=GeneID:1173007;gbkey=misc_feature;gene=nirB
NC_003143.1	RefSeq	gene	177841	179151	.	+	.	ID=gene158;Name=codA;Dbxref=GeneID:1173008;gbkey=Gene;gene=codA;locus_tag=YPO0162
NC_003143.1	RefSeq	CDS	177841	179151	.	+	0	ID=cds148;Name=YP_002345248.1;Parent=gene158;Note=Catalyzes the deamination of cytosine to uracil and ammonia;Dbxref=InterPro:IPR011059,InterPro:IPR013108,UniProtKB%2FTrEMBL:Q7CFV9,Genbank:YP_002345248.1,GeneID:1173008;gbkey=CDS;gene=codA;product=cytosine deaminase;protein_id=YP_002345248.1;transl_table=11
NC_003143.1	RefSeq	gene	179236	180420	.	-	.	ID=gene159;Name=YPO0163;Dbxref=GeneID:1173009;gbkey=Gene;locus_tag=YPO0163
NC_003143.1	RefSeq	CDS	179236	180420	.	-	0	ID=cds149;Name=YP_002345249.1;Parent=gene159;Dbxref=InterPro:IPR007114,InterPro:IPR011701,UniProtKB%2FTrEMBL:Q0WKD9,Genbank:YP_002345249.1,GeneID:1173009;gbkey=CDS;product=hypothetical protein;protein_id=YP_002345249.1;transl_table=11
NC_003143.1	RefSeq	gene	180906	182966	.	+	.	ID=gene160;Name=YPO0164;Dbxref=GeneID:1173010;gbkey=Gene;locus_tag=YPO0164
NC_003143.1	RefSeq	CDS	180906	182966	.	+	0	ID=cds150;Name=YP_002345250.1;Parent=gene160;Dbxref=InterPro:IPR000531,InterPro:IPR010100,InterPro:IPR012910,UniProtKB%2FTrEMBL:Q7CFV8,Genbank:YP_002345250.1,GeneID:1173010;gbkey=CDS;product=membrane receptor protein;protein_id=YP_002345250.1;transl_table=11
NC_003143.1	RefSeq	region	180942	181010	.	+	.	ID=id124;Note=1 probable transmembrane helix predicted;Dbxref=GeneID:1173010;gbkey=misc_feature
NC_003143.1	RefSeq	gene	183067	184053	.	-	.	ID=gene161;Name=YPO0165;Dbxref=GeneID:1173011;gbkey=Gene;locus_tag=YPO0165
NC_003143.1	RefSeq	CDS	183067	184053	.	-	0	ID=cds151;Name=YP_002345251.1;Parent=gene161;Dbxref=InterPro:IPR000843,InterPro:IPR001761,InterPro:IPR010982,UniProtKB%2FTrEMBL:Q7CFV7,Genbank:YP_002345251.1,GeneID:1173011;gbkey=CDS;product=LacI family transcriptional regulator;protein_id=YP_002345251.1;transl_table=11
NC_003143.1	RefSeq	region	183985	184050	.	-	.	ID=id125;Note=Predicted helix-turn-helix motif with score 2027 %28%2B6.09 SD%29 at aa 2-23%2C sequence VTLEDVAVLAGVSRATVSRVVN;Dbxref=GeneID:1173011;gbkey=misc_feature
NC_003143.1	RefSeq	region	183988	184044	.	-	.	ID=id126;Note=PS00356 Bacterial regulatory proteins%2C lacI family signature.;Dbxref=GeneID:1173011;gbkey=misc_feature
NC_003143.1	RefSeq	gene	184302	185615	.	-	.	ID=gene162;Name=YPO0166;Dbxref=GeneID:1173012;gbkey=Gene;locus_tag=YPO0166
NC_003143.1	RefSeq	CDS	184302	185615	.	-	0	ID=cds152;Name=YP_002345252.1;Parent=gene162;Dbxref=InterPro:IPR001088,UniProtKB%2FTrEMBL:Q7CFV6,Genbank:YP_002345252.1,GeneID:1173012;gbkey=CDS;product=glycosyl hydrolase;protein_id=YP_002345252.1;transl_table=11
NC_003143.1	RefSeq	region	185103	185195	.	-	.	ID=id127;Note=PS01324 Glycosyl hydrolases family 4 signature.;Dbxref=GeneID:1173012;gbkey=misc_feature
NC_003143.1	RefSeq	gene	186131	186700	.	+	.	ID=gene163;Name=ppiA;Dbxref=GeneID:1173013;gbkey=Gene;gene=ppiA;gene_synonym=rot,rotA;locus_tag=YPO0167
NC_003143.1	RefSeq	CDS	186131	186700	.	+	0	ID=cds153;Name=YP_002345253.1;Parent=gene163;Dbxref=InterPro:IPR002130,UniProtKB%2FTrEMBL:Q0WKD5,Genbank:YP_002345253.1,GeneID:1173013;gbkey=CDS;gene=ppiA;product=peptidyl-prolyl cis-trans isomerase A;protein_id=YP_002345253.1;transl_table=11
NC_003143.1	RefSeq	region	186320	186373	.	+	.	ID=id128;Note=PS00170 Cyclophilin-type peptidyl-prolyl cis-trans isomerase signature.;Dbxref=GeneID:1173013;gbkey=misc_feature;gene=ppiA
NC_003143.1	RefSeq	gene	187026	188567	.	+	.	ID=gene164;Name=YPO0168;Dbxref=GeneID:1173014;gbkey=Gene;locus_tag=YPO0168
NC_003143.1	RefSeq	CDS	187026	188567	.	+	0	ID=cds154;Name=YP_002345254.1;Parent=gene164;Dbxref=InterPro:IPR003593,InterPro:IPR008571,UniProtKB%2FTrEMBL:Q7CFV5,Genbank:YP_002345254.1,GeneID:1173014;gbkey=CDS;product=hypothetical protein;protein_id=YP_002345254.1;transl_table=11
NC_003143.1	RefSeq	region	187137	187160	.	+	.	ID=id129;Note=PS00017 ATP%2FGTP-binding site motif A %28P-loop%29.;Dbxref=GeneID:1173014;gbkey=misc_feature
NC_003143.1	RefSeq	gene	188810	189385	.	+	.	ID=gene165;Name=pabA;Dbxref=GeneID:1173015;gbkey=Gene;gene=pabA;locus_tag=YPO0169
NC_003143.1	RefSeq	CDS	188810	189385	.	+	0	ID=cds155;Name=YP_002345255.1;Parent=gene165;Note=aminodeoxychorismate synthase subunit PabA%3B with PabB catalyzes the formation of 4-amino-4-deoxychorismate from chorismate and glutamine in para-aminobenzoate synthesis%3B PabA provides the glutamine amidotransferase activity;Dbxref=InterPro:IPR000991,InterPro:IPR001317,InterPro:IPR006220,InterPro:IPR006221,InterPro:IPR011702,InterPro:IPR012998,UniProtKB%2FTrEMBL:Q0WKD3,Genbank:YP_002345255.1,GeneID:1173015;gbkey=CDS;gene=pabA;product=para-aminobenzoate synthase component II;protein_id=YP_002345255.1;transl_table=11
NC_003143.1	RefSeq	region	189029	189064	.	+	.	ID=id130;Note=PS00442 Glutamine amidotransferases class-I active site.;Dbxref=GeneID:1173015;gbkey=misc_feature;gene=pabA
NC_003143.1	RefSeq	region	189518	190051	.	+	.	ID=id131;Note=Similar to Escherichia coli acetylornithine aminotransferase ArgD SW:ARGD_ECOLI %28P18335%29 %28405 aa%29 fasta scores: E%28%29: 0%2C 77.2%25 id in 403 aa. This CDS is interrupted by a IS100 element.;Dbxref=PSEUDO:CAL18856.1;gbkey=misc_feature;part=1%2F2;pseudo=true
NC_003143.1	RefSeq	region	192005	192694	.	+	.	ID=id131;Note=Similar to Escherichia coli acetylornithine aminotransferase ArgD SW:ARGD_ECOLI %28P18335%29 %28405 aa%29 fasta scores: E%28%29: 0%2C 77.2%25 id in 403 aa. This CDS is interrupted by a IS100 element.;Dbxref=PSEUDO:CAL18856.1;gbkey=misc_feature;part=2%2F2;pseudo=true
NC_003143.1	RefSeq	repeat_region	190051	192004	.	+	.	ID=id132;Note=insertion sequence:IS100;gbkey=repeat_region
NC_003143.1	RefSeq	repeat_region	190051	190078	.	+	.	ID=id133;Note=IS100 inverted repeat;gbkey=repeat_region
NC_003143.1	RefSeq	gene	190137	191159	.	+	.	ID=gene166;Name=y1093;Dbxref=GeneID:1173017;gbkey=Gene;gene=y1093;gene_synonym=ypmt1;locus_tag=YPO0171
NC_003143.1	RefSeq	CDS	190137	191159	.	+	0	ID=cds156;Name=YP_002345256.1;Parent=gene166;Dbxref=InterPro:IPR001584,InterPro:IPR006120,InterPro:IPR009057,InterPro:IPR012287,InterPro:IPR012337,UniProtKB%2FTrEMBL:Q7ARN5,Genbank:YP_002345256.1,GeneID:1173017;gbkey=CDS;gene=y1093;product=transposase for insertion sequence IS100;protein_id=YP_002345256.1;transl_table=11
NC_003143.1	RefSeq	region	190188	190253	.	+	.	ID=id134;Note=Predicted helix-turn-helix motif with score 2147 %28%2B6.50 SD%29 at aa 18-39%2C sequence MSSRAIARELGISRNTVKRYLQ;Dbxref=GeneID:1173017;gbkey=misc_feature;gene=y1093
NC_003143.1	RefSeq	gene	191156	191938	.	+	.	ID=gene167;Name=YPO0172;Note=ypmt1.57c;Dbxref=GeneID:1173018;gbkey=Gene;locus_tag=YPO0172
NC_003143.1	RefSeq	CDS	191156	191938	.	+	0	ID=cds157;Name=YP_002345257.1;Parent=gene167;Dbxref=InterPro:IPR001270,InterPro:IPR002611,InterPro:IPR003593,UniProtKB%2FTrEMBL:Q7ARK4,Genbank:YP_002345257.1,GeneID:1173018;gbkey=CDS;product=transposase%2FIS protein;protein_id=YP_002345257.1;transl_table=11
NC_003143.1	RefSeq	region	191483	191506	.	+	.	ID=id135;Note=PS00017 ATP%2FGTP-binding site motif A %28P-loop%29.;Dbxref=GeneID:1173018;gbkey=misc_feature
NC_003143.1	RefSeq	repeat_region	191977	192004	.	-	.	ID=id136;Note=IS100 inverted repeat;gbkey=repeat_region
NC_003143.1	RefSeq	region	192140	192253	.	+	.	ID=id137;Note=PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site.;gbkey=misc_feature
NC_003143.1	RefSeq	gene	192920	195040	.	-	.	ID=gene168;Name=YPO0174;Dbxref=GeneID:1173019;gbkey=Gene;locus_tag=YPO0174
NC_003143.1	RefSeq	CDS	192920	195040	.	-	0	ID=cds158;Name=YP_002345258.1;Parent=gene168;Dbxref=InterPro:IPR010020,InterPro:IPR010289,UniProtKB%2FTrEMBL:Q7CFV4,Genbank:YP_002345258.1,GeneID:1173019;gbkey=CDS;product=hypothetical protein;protein_id=YP_002345258.1;transl_table=11
NC_003143.1	RefSeq	gene	195126	195758	.	-	.	ID=gene169;Name=crp;Dbxref=GeneID:1173020;gbkey=Gene;gene=crp;gene_synonym=csm;locus_tag=YPO0175
NC_003143.1	RefSeq	CDS	195126	195758	.	-	0	ID=cds159;Name=YP_002345259.1;Parent=gene169;Note=complexes with cyclic AMP and binds to specific DNA sites near the promoter to regulate the transcription of several catabolite-sensitive operons;Dbxref=InterPro:IPR000595,InterPro:IPR001808,InterPro:IPR011991,InterPro:IPR012318,UniProtKB%2FTrEMBL:Q7CFV3,Genbank:YP_002345259.1,GeneID:1173020;gbkey=CDS;gene=crp;product=cAMP-regulatory protein;protein_id=YP_002345259.1;transl_table=11
NC_003143.1	RefSeq	region	195186	195257	.	-	.	ID=id138;Note=PS00042 Bacterial regulatory proteins%2C crp family signature.;Dbxref=GeneID:1173020;gbkey=misc_feature;gene=crp
NC_003143.1	RefSeq	region	195192	195257	.	-	.	ID=id139;Note=Predicted helix-turn-helix motif with score 2127 %28%2B6.43 SD%29 at aa 168-189%2C sequence ITRQEIGQIVGCSRETVGRILK;Dbxref=GeneID:1173020;gbkey=misc_feature;gene=crp
NC_003143.1	RefSeq	region	195492	195548	.	-	.	ID=id140;Note=PS00889 Cyclic nucleotide-binding domain signature 2.;Dbxref=GeneID:1173020;gbkey=misc_feature;gene=crp
NC_003143.1	RefSeq	region	195621	195671	.	-	.	ID=id141;Note=PS00888 Cyclic nucleotide-binding domain signature 1.;Dbxref=GeneID:1173020;gbkey=misc_feature;gene=crp
NC_003143.1	RefSeq	gene	196094	196501	.	+	.	ID=gene170;Name=YPO0176;Dbxref=GeneID:1173021;gbkey=Gene;locus_tag=YPO0176
NC_003143.1	RefSeq	CDS	196094	196501	.	+	0	ID=cds160;Name=YP_002345260.1;Parent=gene170;Dbxref=InterPro:IPR003718,UniProtKB%2FTrEMBL:Q7CFV2,Genbank:YP_002345260.1,GeneID:1173021;gbkey=CDS;product=hypothetical protein;protein_id=YP_002345260.1;transl_table=11
NC_003143.1	RefSeq	gene	196573	197004	.	+	.	ID=gene171;Name=YPO0177;Dbxref=GeneID:1173022;gbkey=Gene;locus_tag=YPO0177
NC_003143.1	RefSeq	CDS	196573	197004	.	+	0	ID=cds161;Name=YP_002345261.1;Parent=gene171;Note=No significant database hits. CDS DNA has a low G%2BC content %2834%25%29.;Dbxref=InterPro:IPR010665,UniProtKB%2FTrEMBL:Q7CFV1,Genbank:YP_002345261.1,GeneID:1173022;gbkey=CDS;product=hypothetical protein;protein_id=YP_002345261.1;transl_table=11
NC_003143.1	RefSeq	gene	197182	198051	.	-	.	ID=gene172;Name=prk;Dbxref=GeneID:1173023;gbkey=Gene;gene=prk;locus_tag=YPO0178
NC_003143.1	RefSeq	CDS	197182	198051	.	-	0	ID=cds162;Name=YP_002345262.1;Parent=gene172;Dbxref=InterPro:IPR006082,InterPro:IPR006083,UniProtKB%2FTrEMBL:Q0WKC6,Genbank:YP_002345262.1,GeneID:1173023;gbkey=CDS;gene=prk;product=phosphoribulokinase 1;protein_id=YP_002345262.1;transl_table=11
NC_003143.1	RefSeq	region	197521	197562	.	-	.	ID=id142;Note=PS00567 Phosphoribulokinase signature.;Dbxref=GeneID:1173023;gbkey=misc_feature;gene=prk
NC_003143.1	RefSeq	gene	198200	198436	.	-	.	ID=gene173;Name=YPO0179;Dbxref=GeneID:1173024;gbkey=Gene;locus_tag=YPO0179
NC_003143.1	RefSeq	CDS	198200	198436	.	-	0	ID=cds163;Name=YP_002345263.1;Parent=gene173;Dbxref=InterPro:IPR008227,InterPro:IPR010648,UniProtKB%2FTrEMBL:Q0WKC5,Genbank:YP_002345263.1,GeneID:1173024;gbkey=CDS;product=hypothetical protein;protein_id=YP_002345263.1;transl_table=11
NC_003143.1	RefSeq	gene	198433	199413	.	-	.	ID=gene174;Name=YPO0180;Dbxref=GeneID:1173025;gbkey=Gene;locus_tag=YPO0180
NC_003143.1	RefSeq	CDS	198433	199413	.	-	0	ID=cds164;Name=YP_002345264.1;Parent=gene174;Dbxref=InterPro:IPR000073,InterPro:IPR000952,InterPro:IPR012020,UniProtKB%2FTrEMBL:Q7CFV0,Genbank:YP_002345264.1,GeneID:1173025;gbkey=CDS;product=hydrolase;protein_id=YP_002345264.1;transl_table=11
NC_003143.1	RefSeq	region	198613	198738	.	-	.	ID=id143;Note=PS01133 Uncharacterized protein family UPF0017 signature.;Dbxref=GeneID:1173025;gbkey=misc_feature
NC_003143.1	RefSeq	gene	199515	200117	.	+	.	ID=gene175;Name=YPO0181;Dbxref=GeneID:1173026;gbkey=Gene;locus_tag=YPO0181
NC_003143.1	RefSeq	CDS	199515	200117	.	+	0	ID=cds165;Name=YP_002345265.1;Parent=gene175;Dbxref=InterPro:IPR001123,InterPro:IPR003439,UniProtKB%2FTrEMBL:Q0WKC3,Genbank:YP_002345265.1,GeneID:1173026;gbkey=CDS;product=ABC transporter;protein_id=YP_002345265.1;transl_table=11
NC_003143.1	RefSeq	region	199956	200000	.	+	.	ID=id144;Note=PS00211 ABC transporters family signature.;Dbxref=GeneID:1173026;gbkey=misc_feature
NC_003143.1	RefSeq	gene	200320	201381	.	+	.	ID=gene176;Name=tauA;Dbxref=GeneID:1173027;gbkey=Gene;gene=tauA;locus_tag=YPO0182
NC_003143.1	RefSeq	CDS	200320	201381	.	+	0	ID=cds166;Name=YP_002345266.1;Parent=gene176;Note=with TauB and TauC is responsible for taurine uptake.;Dbxref=InterPro:IPR001638,InterPro:IPR007210,InterPro:IPR010068,UniProtKB%2FTrEMBL:Q7CFU9,Genbank:YP_002345266.1,GeneID:1173027;gbkey=CDS;gene=tauA;product=taurine transporter substrate binding subunit;protein_id=YP_002345266.1;transl_table=11
NC_003143.1	RefSeq	gene	201390	202157	.	+	.	ID=gene177;Name=tauB;Dbxref=GeneID:1173028;gbkey=Gene;gene=tauB;locus_tag=YPO0183
NC_003143.1	RefSeq	CDS	201390	202157	.	+	0	ID=cds167;Name=YP_002345267.1;Parent=gene177;Note=Part of the ABC transporter complex tauABC involved in taurine import;Dbxref=InterPro:IPR003439,InterPro:IPR003593,UniProtKB%2FTrEMBL:Q0WKC1,Genbank:YP_002345267.1,GeneID:1173028;gbkey=CDS;gene=tauB;product=taurine transporter ATP-binding protein;protein_id=YP_002345267.1;transl_table=11
NC_003143.1	RefSeq	region	201489	201512	.	+	.	ID=id145;Note=PS00017 ATP%2FGTP-binding site motif A %28P-loop%29.;Dbxref=GeneID:1173028;gbkey=misc_feature;gene=tauB
NC_003143.1	RefSeq	region	201774	201818	.	+	.	ID=id146;Note=PS00211 ABC transporters family signature.;Dbxref=GeneID:1173028;gbkey=misc_feature;gene=tauB
NC_003143.1	RefSeq	gene	202154	203008	.	+	.	ID=gene178;Name=tauC;Dbxref=GeneID:1173029;gbkey=Gene;gene=tauC;locus_tag=YPO0184
NC_003143.1	RefSeq	CDS	202154	203008	.	+	0	ID=cds168;Name=YP_002345268.1;Parent=gene178;Dbxref=InterPro:IPR000515,UniProtKB%2FTrEMBL:Q7CFU7,Genbank:YP_002345268.1,GeneID:1173029;gbkey=CDS;gene=tauC;product=taurine transporter subunit;protein_id=YP_002345268.1;transl_table=11
NC_003143.1	RefSeq	region	202673	202759	.	+	.	ID=id147;Note=PS00402 Binding-protein-dependent transport systems inner membrane comp. sign.;Dbxref=GeneID:1173029;gbkey=misc_feature;gene=tauC
NC_003143.1	RefSeq	gene	203005	203853	.	+	.	ID=gene179;Name=tauD;Dbxref=GeneID:1173030;gbkey=Gene;gene=tauD;locus_tag=YPO0185
NC_003143.1	RefSeq	CDS	203005	203853	.	+	0	ID=cds169;Name=YP_002345269.1;Parent=gene179;Note=catalyzes the conversion of taurine %282-aminoethanesulfonate%29 to sulfite and aminoacetaldehyde concurrently with the conversion of alpha-ketoglutarate to succinate and carbon dioxide%3B non-heme iron oxidase%3B allows the use of taurine as an alternative sulfur source%3B forms homodimers;Dbxref=InterPro:IPR003819,UniProtKB%2FTrEMBL:Q0WKB9,Genbank:YP_002345269.1,GeneID:1173030;gbkey=CDS;gene=tauD;product=taurine dioxygenase;protein_id=YP_002345269.1;transl_table=11
NC_003143.1	RefSeq	gene	203866	204846	.	-	.	ID=gene180;Name=YPO0186;Dbxref=GeneID:1173031;gbkey=Gene;locus_tag=YPO0186
NC_003143.1	RefSeq	CDS	203866	204846	.	-	0	ID=cds170;Name=YP_002345270.1;Parent=gene180;Dbxref=InterPro:IPR002201,UniProtKB%2FTrEMBL:Q3V8F4,Genbank:YP_002345270.1,GeneID:1173031;gbkey=CDS;product=sugar transferase;protein_id=YP_002345270.1;transl_table=11
NC_003143.1	RefSeq	gene	204939	205928	.	-	.	ID=gene181;Name=YPO0187;Dbxref=GeneID:1173032;gbkey=Gene;locus_tag=YPO0187
NC_003143.1	RefSeq	CDS	204939	205928	.	-	0	ID=cds171;Name=YP_002345271.1;Parent=gene181;Dbxref=InterPro:IPR001173,UniProtKB%2FTrEMBL:Q7CFU6,Genbank:YP_002345271.1,GeneID:1173032;gbkey=CDS;product=glycosyl transferase;protein_id=YP_002345271.1;transl_table=11
NC_003143.1	RefSeq	gene	206063	207981	.	-	.	ID=gene182;Name=YPO0188;Dbxref=GeneID:1173033;gbkey=Gene;locus_tag=YPO0188;pseudo=true
NC_003143.1	RefSeq	region	206651	206695	.	-	.	ID=id148;Note=PS00211 ABC transporters family signature.;Dbxref=GeneID:1173033;gbkey=misc_feature
NC_003143.1	RefSeq	region	206930	206953	.	-	.	ID=id149;Note=PS00017 ATP%2FGTP-binding site motif A %28P-loop%29.;Dbxref=GeneID:1173033;gbkey=misc_feature
NC_003143.1	RefSeq	region	207490	207534	.	-	.	ID=id150;Note=PS00211 ABC transporters family signature.;Dbxref=GeneID:1173033;gbkey=misc_feature
NC_003143.1	RefSeq	region	207859	207882	.	-	.	ID=id151;Note=PS00017 ATP%2FGTP-binding site motif A %28P-loop%29.;Dbxref=GeneID:1173033;gbkey=misc_feature
NC_003143.1	RefSeq	gene	208229	208780	.	+	.	ID=gene183;Name=YPO0190;Dbxref=GeneID:1173034;gbkey=Gene;locus_tag=YPO0190
NC_003143.1	RefSeq	CDS	208229	208780	.	+	0	ID=cds172;Name=YP_002345272.1;Parent=gene183;Note=required for KefB activity;Dbxref=InterPro:IPR003680,UniProtKB%2FTrEMBL:Q0WKB6,Genbank:YP_002345272.1,GeneID:1173034;gbkey=CDS;product=glutathione-regulated potassium-efflux system ancillary protein KefG;protein_id=YP_002345272.1;transl_table=11
NC_003143.1	RefSeq	gene	208784	210592	.	+	.	ID=gene184;Name=kefB;Dbxref=GeneID:1173035;gbkey=Gene;gene=kefB;gene_synonym=trkB;locus_tag=YPO0191
NC_003143.1	RefSeq	CDS	208784	210592	.	+	0	ID=cds173;Name=YP_002345273.1;Parent=gene184;Note=involved in potassium efflux;Dbxref=InterPro:IPR003148,InterPro:IPR004771,InterPro:IPR006036,InterPro:IPR006153,UniProtKB%2FTrEMBL:Q0WKB5,Genbank:YP_002345273.1,GeneID:1173035;gbkey=CDS;gene=kefB;product=glutathione-regulated potassium-efflux system protein KefB;protein_id=YP_002345273.1;transl_table=11
NC_003143.1	RefSeq	gene	210608	210829	.	+	.	ID=gene185;Name=YPO0192;Dbxref=GeneID:1173036;gbkey=Gene;locus_tag=YPO0192
NC_003143.1	RefSeq	CDS	210608	210829	.	+	0	ID=cds174;Name=YP_002345274.1;Parent=gene185;Dbxref=InterPro:IPR012658,UniProtKB%2FTrEMBL:Q7CFU5,Genbank:YP_002345274.1,GeneID:1173036;gbkey=CDS;product=hypothetical protein;protein_id=YP_002345274.1;transl_table=11
NC_003143.1	RefSeq	gene	210924	211511	.	+	.	ID=gene186;Name=slyD;Dbxref=GeneID:1173037;gbkey=Gene;gene=slyD;locus_tag=YPO0193
NC_003143.1	RefSeq	CDS	210924	211511	.	+	0	ID=cds175;Name=YP_002345275.1;Parent=gene186;Note=rotamase;Dbxref=InterPro:IPR001179,UniProtKB%2FTrEMBL:Q7CFU4,Genbank:YP_002345275.1,GeneID:1173037;gbkey=CDS;gene=slyD;product=FKBP-type peptidylprolyl isomerase;protein_id=YP_002345275.1;transl_table=11
NC_003143.1	RefSeq	region	210954	211001	.	+	.	ID=id152;Note=PS00453 FKBP-type peptidyl-prolyl cis-trans isomerase signature 1.;Dbxref=GeneID:1173037;gbkey=misc_feature;gene=slyD
NC_003143.1	RefSeq	region	211044	211130	.	+	.	ID=id153;Note=PS00454 FKBP-type peptidyl-prolyl cis-trans isomerase signature 2.;Dbxref=GeneID:1173037;gbkey=misc_feature;gene=slyD
NC_003143.1	RefSeq	region	211467	211490	.	+	.	ID=id154;Note=PS00017 ATP%2FGTP-binding site motif A %28P-loop%29.;Dbxref=GeneID:1173037;gbkey=misc_feature;gene=slyD
NC_003143.1	RefSeq	gene	211732	211950	.	-	.	ID=gene187;Name=YPO0194;Dbxref=GeneID:1173038;gbkey=Gene;locus_tag=YPO0194
NC_003143.1	RefSeq	CDS	211732	211950	.	-	0	ID=cds176;Name=YP_002345276.1;Parent=gene187;Dbxref=InterPro:IPR007236,UniProtKB%2FTrEMBL:Q0WKB2,Genbank:YP_002345276.1,GeneID:1173038;gbkey=CDS;product=hypothetical protein;protein_id=YP_002345276.1;transl_table=11
NC_003143.1	RefSeq	gene	212265	213065	.	+	.	ID=gene188;Name=fkpA;Dbxref=GeneID:1173039;gbkey=Gene;gene=fkpA;locus_tag=YPO0195
NC_003143.1	RefSeq	CDS	212265	213065	.	+	0	ID=cds177;Name=YP_002345277.1;Parent=gene188;Note=rotamase;Dbxref=InterPro:IPR000774,InterPro:IPR001179,UniProtKB%2FTrEMBL:Q0WKB1,Genbank:YP_002345277.1,GeneID:1173039;gbkey=CDS;gene=fkpA;product=FKBP-type peptidylprolyl isomerase;protein_id=YP_002345277.1;transl_table=11
NC_003143.1	RefSeq	region	212847	212933	.	+	.	ID=id155;Note=PS00454 FKBP-type peptidyl-prolyl cis-trans isomerase signature 2.;Dbxref=GeneID:1173039;gbkey=misc_feature;gene=fkpA
NC_003143.1	RefSeq	gene	213307	214041	.	+	.	ID=gene189;Name=YPO0196;Dbxref=GeneID:1173040;gbkey=Gene;locus_tag=YPO0196
NC_003143.1	RefSeq	CDS	213307	214041	.	+	0	ID=cds178;Name=YP_002345278.1;Parent=gene189;Dbxref=InterPro:IPR009057,InterPro:IPR013559,UniProtKB%2FTrEMBL:Q7CFU3,Genbank:YP_002345278.1,GeneID:1173040;gbkey=CDS;product=DNA-binding protein;protein_id=YP_002345278.1;transl_table=11
NC_003143.1	RefSeq	region	213937	214002	.	+	.	ID=id156;Note=Predicted helix-turn-helix motif with score 1342 %28%2B3.76 SD%29 at aa 211-232%2C sequence DAINQVAERLNISKHTVYLYIR;Dbxref=GeneID:1173040;gbkey=misc_feature
NC_003143.1	RefSeq	gene	214041	214436	.	+	.	ID=gene190;Name=YPO0197;Dbxref=GeneID:1173041;gbkey=Gene;locus_tag=YPO0197
NC_003143.1	RefSeq	CDS	214041	214436	.	+	0	ID=cds179;Name=YP_002345279.1;Parent=gene190;Note=in Escherichai coli the heterohexameric TusBCD complex is involved in sulfur related that results in thiouridation to U34 position in some tRNAs;Dbxref=InterPro:IPR003787,UniProtKB%2FTrEMBL:Q0WKA9,Genbank:YP_002345279.1,GeneID:1173041;gbkey=CDS;product=sulfur transfer complex subunit TusD;protein_id=YP_002345279.1;transl_table=11
NC_003143.1	RefSeq	gene	214436	214801	.	+	.	ID=gene191;Name=YPO0198;Dbxref=GeneID:1173042;gbkey=Gene;locus_tag=YPO0198
NC_003143.1	RefSeq	CDS	214436	214801	.	+	0	ID=cds180;Name=YP_002345280.1;Parent=gene191;Note=in Escherichai coli the heterohexameric TusBCD complex is involved in sulfur related that results in thiouridation to U34 position in some tRNAs;Dbxref=InterPro:IPR003787,UniProtKB%2FTrEMBL:Q0WKA8,Genbank:YP_002345280.1,GeneID:1173042;gbkey=CDS;product=sulfur relay protein TusC;protein_id=YP_002345280.1;transl_table=11
NC_003143.1	RefSeq	gene	214821	215108	.	+	.	ID=gene192;Name=YPO0199;Dbxref=GeneID:1173043;gbkey=Gene;locus_tag=YPO0199
NC_003143.1	RefSeq	CDS	214821	215108	.	+	0	ID=cds181;Name=YP_002345281.1;Parent=gene192;Note=in Escherichai coli the heterohexameric TusBCD complex is involved in sulfur related that results in thiouridation to U34 position in some tRNAs;Dbxref=InterPro:IPR007215,UniProtKB%2FTrEMBL:Q0WKA7,Genbank:YP_002345281.1,GeneID:1173043;gbkey=CDS;product=sulfur transfer complex subunit TusB;protein_id=YP_002345281.1;transl_table=11
NC_003143.1	RefSeq	gene	215246	215620	.	+	.	ID=gene193;Name=rpsL;Dbxref=GeneID:1173044;gbkey=Gene;gene=rpsL;gene_synonym=strA;locus_tag=YPO0200
NC_003143.1	RefSeq	CDS	215246	215620	.	+	0	ID=cds182;Name=YP_002345282.1;Parent=gene193;Note=interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone%3B located at the interface of the 30S and 50S subunits%2C it traverses the body of the 30S subunit contacting proteins on the other side%3B mutations in the S12 gene confer streptomycin resistance;Dbxref=InterPro:IPR005679,InterPro:IPR006032,InterPro:IPR008994,InterPro:IPR012340,UniProtKB%2FTrEMBL:Q0WKA6,Genbank:YP_002345282.1,GeneID:1173044;gbkey=CDS;gene=rpsL;product=30S ribosomal protein S12;protein_id=YP_002345282.1;transl_table=11
NC_003143.1	RefSeq	region	215372	215395	.	+	.	ID=id157;Note=PS00055 Ribosomal protein S12 signature.;Dbxref=GeneID:1173044;gbkey=misc_feature;gene=rpsL
NC_003143.1	RefSeq	gene	215717	216187	.	+	.	ID=gene194;Name=rpsG;Dbxref=GeneID:1173045;gbkey=Gene;gene=rpsG;locus_tag=YPO0201
NC_003143.1	RefSeq	CDS	215717	216187	.	+	0	ID=cds183;Name=YP_002345283.1;Parent=gene194;Note=binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit;Dbxref=InterPro:IPR000235,InterPro:IPR005717,UniProtKB%2FTrEMBL:Q0WKA5,Genbank:YP_002345283.1,GeneID:1173045;gbkey=CDS;gene=rpsG;product=30S ribosomal protein S7;protein_id=YP_002345283.1;transl_table=11
NC_003143.1	RefSeq	region	215774	215854	.	+	.	ID=id158;Note=PS00052 Ribosomal protein S7 signature.;Dbxref=GeneID:1173045;gbkey=misc_feature;gene=rpsG
NC_003143.1	RefSeq	gene	216281	218389	.	+	.	ID=gene195;Name=fusA;Dbxref=GeneID:1173046;gbkey=Gene;gene=fusA;gene_synonym=fus,fusA;locus_tag=YPO0202
NC_003143.1	RefSeq	CDS	216281	218389	.	+	0	ID=cds184;Name=YP_002345284.1;Parent=gene195;Note=EF-G%3B promotes GTP-dependent translocation of the ribosome during translation%3B many organisms have multiple copies of this gene;Dbxref=InterPro:IPR000640,InterPro:IPR000795,InterPro:IPR004161,InterPro:IPR004540,InterPro:IPR005225,InterPro:IPR005517,InterPro:IPR009000,InterPro:IPR009022,UniProtKB%2FTrEMBL:Q0WKA4,Genbank:YP_002345284.1,GeneID:1173046;gbkey=CDS;gene=fusA;product=elongation factor G;protein_id=YP_002345284.1;transl_table=11
NC_003143.1	RefSeq	region	216329	216352	.	+	.	ID=id159;Note=PS00017 ATP%2FGTP-binding site motif A %28P-loop%29.;Dbxref=GeneID:1173046;gbkey=misc_feature;gene=fusA
NC_003143.1	RefSeq	region	216431	216478	.	+	.	ID=id160;Note=PS00301 GTP-binding elongation factors signature.;Dbxref=GeneID:1173046;gbkey=misc_feature;gene=fusA
NC_003143.1	RefSeq	gene	218462	219646	.	+	.	ID=gene196;Name=tuf;Dbxref=GeneID:1173047;gbkey=Gene;gene=tuf;gene_synonym=tufB;locus_tag=YPO0203
NC_003143.1	RefSeq	CDS	218462	219646	.	+	0	ID=cds185;Name=YP_002345285.1;Parent=gene196;Note=EF-Tu%3B promotes GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis%3B when the tRNA anticodon matches the mRNA codon%2C GTP hydrolysis results%3B the inactive EF-Tu-GDP leaves the ribosome and release of GDP is promoted by elongation factor Ts%3B many prokaryotes have two copies of the gene encoding EF-Tu;Dbxref=InterPro:IPR000795,InterPro:IPR004160,InterPro:IPR004161,InterPro:IPR004541,InterPro:IPR005225,InterPro:IPR009000,InterPro:IPR009001,UniProtKB%2FTrEMBL:Q0WKA3,Genbank:YP_002345285.1,GeneID:1173047;gbkey=CDS;gene=tuf;product=elongation factor Tu;protein_id=YP_002345285.1;transl_table=11
NC_003143.1	RefSeq	region	218516	218539	.	+	.	ID=id161;Note=PS00017 ATP%2FGTP-binding site motif A %28P-loop%29.;Dbxref=GeneID:1173047;gbkey=misc_feature;gene=tuf
NC_003143.1	RefSeq	region	218612	218659	.	+	.	ID=id162;Note=PS00301 GTP-binding elongation factors signature.;Dbxref=GeneID:1173047;gbkey=misc_feature;gene=tuf
NC_003143.1	RefSeq	repeat_region	219704	220415	.	+	.	ID=id163;Note=Contains a %27G%27 at nucleotide position 315%7EIS200-like insertion sequence:IS1541;gbkey=repeat_region
NC_003143.1	RefSeq	gene	219849	220307	.	+	.	ID=gene197;Name=tnp;Dbxref=GeneID:1173048;gbkey=Gene;gene=tnp;locus_tag=YPO0204
NC_003143.1	RefSeq	CDS	219849	220307	.	+	0	ID=cds186;Name=YP_002345286.1;Parent=gene197;Dbxref=InterPro:IPR002686,UniProtKB%2FTrEMBL:Q74YM6,Genbank:YP_002345286.1,GeneID:1173048;gbkey=CDS;gene=tnp;product=transposase for the IS1541 insertion element;protein_id=YP_002345286.1;transl_table=11
NC_003143.1	RefSeq	gene	220495	220689	.	+	.	ID=gene198;Name=bfd;Dbxref=GeneID:1173049;gbkey=Gene;gene=bfd;locus_tag=YPO0205
NC_003143.1	RefSeq	CDS	220495	220689	.	+	0	ID=cds187;Name=YP_002345287.1;Parent=gene198;Dbxref=InterPro:IPR007419,UniProtKB%2FTrEMBL:Q74XZ3,Genbank:YP_002345287.1,GeneID:1173049;gbkey=CDS;gene=bfd;product=bacterioferritin-associated ferredoxin;protein_id=YP_002345287.1;transl_table=11
NC_003143.1	RefSeq	gene	220768	221241	.	+	.	ID=gene199;Name=bfr;Dbxref=GeneID:1173050;gbkey=Gene;gene=bfr;locus_tag=YPO0206
NC_003143.1	RefSeq	CDS	220768	221241	.	+	0	ID=cds188;Name=YP_002345288.1;Parent=gene199;Note=iron storage protein;Dbxref=InterPro:IPR002024,InterPro:IPR008331,InterPro:IPR009040,InterPro:IPR009078,InterPro:IPR012347,UniProtKB%2FTrEMBL:Q7CFU0,Genbank:YP_002345288.1,GeneID:1173050;gbkey=CDS;gene=bfr;product=bacterioferritin;protein_id=YP_002345288.1;transl_table=11
NC_003143.1	RefSeq	gene	221655	221966	.	+	.	ID=gene200;Name=rpsJ;Dbxref=GeneID:1173051;gbkey=Gene;gene=rpsJ;locus_tag=YPO0209
NC_003143.1	RefSeq	CDS	221655	221966	.	+	0	ID=cds189;Name=YP_002345289.1;Parent=gene200;Note=NusE%3B involved in assembly of the 30S subunit%3B in the ribosome%2C this protein is involved in the binding of tRNA%3B in Escherichia coli this protein was also found to be involved in transcription antitermination%3B NusB%2FS10 heterodimers bind boxA sequences in the leader RNA of rrn operons which is required for antitermination%3B binding of NusB%2FS10 to boxA nucleates assembly of the antitermination complex;Dbxref=InterPro:IPR001848,InterPro:IPR005731,UniProtKB%2FTrEMBL:Q0WK99,Genbank:YP_002345289.1,GeneID:1173051;gbkey=CDS;gene=rpsJ;product=30S ribosomal protein S10;protein_id=YP_002345289.1;transl_table=11
NC_003143.1	RefSeq	region	221739	221786	.	+	.	ID=id164;Note=PS00361 Ribosomal protein S10 signature.;Dbxref=GeneID:1173051;gbkey=misc_feature;gene=rpsJ
NC_003143.1	RefSeq	gene	221999	222628	.	+	.	ID=gene201;Name=rplC;Dbxref=GeneID:1173052;gbkey=Gene;gene=rplC;locus_tag=YPO0210
NC_003143.1	RefSeq	CDS	221999	222628	.	+	0	ID=cds190;Name=YP_002345290.1;Parent=gene201;Note=binds directly near the 3%27 end of the 23S rRNA%2C where it nucleates assembly of the 50S subunit%3B essential for peptidyltransferase activity%3B mutations in this gene confer resistance to tiamulin;Dbxref=InterPro:IPR000597,InterPro:IPR009000,UniProtKB%2FTrEMBL:Q0WK98,Genbank:YP_002345290.1,GeneID:1173052;gbkey=CDS;gene=rplC;product=50S ribosomal protein L3;protein_id=YP_002345290.1;transl_table=11
NC_003143.1	RefSeq	region	222299	222370	.	+	.	ID=id165;Note=PS00474 Ribosomal protein L3 signature.;Dbxref=GeneID:1173052;gbkey=misc_feature;gene=rplC
NC_003143.1	RefSeq	gene	222645	223250	.	+	.	ID=gene202;Name=rplD;Dbxref=GeneID:1173053;gbkey=Gene;gene=rplD;locus_tag=YPO0211
NC_003143.1	RefSeq	CDS	222645	223250	.	+	0	ID=cds191;Name=YP_002345291.1;Parent=gene202;Note=L4 is important during the early stages of 50S assembly%3B it initially binds near the 5%27 end of the 23S rRNA;Dbxref=InterPro:IPR002136,InterPro:IPR013005,UniProtKB%2FTrEMBL:Q0WK97,Genbank:YP_002345291.1,GeneID:1173053;gbkey=CDS;gene=rplD;product=50S ribosomal protein L4;protein_id=YP_002345291.1;transl_table=11
NC_003143.1	RefSeq	gene	223247	223549	.	+	.	ID=gene203;Name=rplW;Dbxref=GeneID:1173054;gbkey=Gene;gene=rplW;locus_tag=YPO0212
NC_003143.1	RefSeq	CDS	223247	223549	.	+	0	ID=cds192;Name=YP_002345292.1;Parent=gene203;Note=binds third domain of 23S rRNA and protein L29%3B part of exit tunnel;Dbxref=InterPro:IPR001014,InterPro:IPR010916,InterPro:IPR012677,InterPro:IPR012678,InterPro:IPR013025,UniProtKB%2FTrEMBL:Q0WK96,Genbank:YP_002345292.1,GeneID:1173054;gbkey=CDS;gene=rplW;product=50S ribosomal protein L23;protein_id=YP_002345292.1;transl_table=11
NC_003143.1	RefSeq	region	223247	223444	.	+	.	ID=id166;Note=PS00430 TonB-dependent receptor proteins signature 1.;Dbxref=GeneID:1173054;gbkey=misc_feature;gene=rplW
NC_003143.1	RefSeq	region	223487	223534	.	+	.	ID=id167;Note=PS00050 Ribosomal protein L23 signature.;Dbxref=GeneID:1173054;gbkey=misc_feature;gene=rplW
NC_003143.1	RefSeq	gene	223566	224390	.	+	.	ID=gene204;Name=rplB;Dbxref=GeneID:1173055;gbkey=Gene;gene=rplB;locus_tag=YPO0213
NC_003143.1	RefSeq	CDS	223566	224390	.	+	0	ID=cds193;Name=YP_002345293.1;Parent=gene204;Note=one of the primary rRNA-binding proteins%3B required for association of the 30S and 50S subunits to form the 70S ribosome%2C for tRNA binding and peptide bond formation;Dbxref=InterPro:IPR002171,InterPro:IPR005880,InterPro:IPR008991,InterPro:IPR008994,UniProtKB%2FTrEMBL:Q0WK95,Genbank:YP_002345293.1,GeneID:1173055;gbkey=CDS;gene=rplB;product=50S ribosomal protein L2;protein_id=YP_002345293.1;transl_table=11
NC_003143.1	RefSeq	region	224217	224252	.	+	.	ID=id168;Note=PS00467 Ribosomal protein L2 signature.;Dbxref=GeneID:1173055;gbkey=misc_feature;gene=rplB
NC_003143.1	RefSeq	gene	224405	224683	.	+	.	ID=gene205;Name=rpsS;Dbxref=GeneID:1173056;gbkey=Gene;gene=rpsS;locus_tag=YPO0214
NC_003143.1	RefSeq	CDS	224405	224683	.	+	0	ID=cds194;Name=YP_002345294.1;Parent=gene205;Note=protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA;Dbxref=InterPro:IPR002222,InterPro:IPR005732,UniProtKB%2FTrEMBL:Q0WK94,Genbank:YP_002345294.1,GeneID:1173056;gbkey=CDS;gene=rpsS;product=30S ribosomal protein S19;protein_id=YP_002345294.1;transl_table=11
NC_003143.1	RefSeq	region	224561	224635	.	+	.	ID=id169;Note=PS00323 Ribosomal protein S19 signature.;Dbxref=GeneID:1173056;gbkey=misc_feature;gene=rpsS
NC_003143.1	RefSeq	gene	224698	225030	.	+	.	ID=gene206;Name=rplV;Dbxref=GeneID:1173057;gbkey=Gene;gene=rplV;locus_tag=YPO0215
NC_003143.1	RefSeq	CDS	224698	225030	.	+	0	ID=cds195;Name=YP_002345295.1;Parent=gene206;Note=binds specifically to 23S rRNA during the early stages of 50S assembly%3B makes contact with all 6 domains of the 23S rRNA in the assembled 50S subunit and ribosome%3B mutations in this gene result in erythromycin resistance%3B located near peptidyl-transferase center;Dbxref=InterPro:IPR001063,InterPro:IPR005727,UniProtKB%2FTrEMBL:Q0WK93,Genbank:YP_002345295.1,GeneID:1173057;gbkey=CDS;gene=rplV;product=50S ribosomal protein L22;protein_id=YP_002345295.1;transl_table=11
NC_003143.1	RefSeq	region	224944	225018	.	+	.	ID=id170;Note=PS00464 Ribosomal protein L22 signature.;Dbxref=GeneID:1173057;gbkey=misc_feature;gene=rplV
NC_003143.1	RefSeq	gene	225048	225746	.	+	.	ID=gene207;Name=rpsC;Dbxref=GeneID:1173058;gbkey=Gene;gene=rpsC;locus_tag=YPO0216
NC_003143.1	RefSeq	CDS	225048	225746	.	+	0	ID=cds196;Name=YP_002345296.1;Parent=gene207;Note=forms a complex with S10 and S14%3B binds the lower part of the 30S subunit head and the mRNA in the complete ribosome to position it for translation;Dbxref=InterPro:IPR001351,InterPro:IPR004044,InterPro:IPR004087,InterPro:IPR005704,InterPro:IPR008282,InterPro:IPR009019,UniProtKB%2FTrEMBL:Q0WK92,Genbank:YP_002345296.1,GeneID:1173058;gbkey=CDS;gene=rpsC;product=30S ribosomal protein S3;protein_id=YP_002345296.1;transl_table=11
NC_003143.1	RefSeq	region	225534	225638	.	+	.	ID=id171;Note=PS00548 Ribosomal protein S3 signature.;Dbxref=GeneID:1173058;gbkey=misc_feature;gene=rpsC
NC_003143.1	RefSeq	gene	225759	226169	.	+	.	ID=gene208;Name=rplP;Dbxref=GeneID:1173059;gbkey=Gene;gene=rplP;locus_tag=YPO0217
NC_003143.1	RefSeq	CDS	225759	226169	.	+	0	ID=cds197;Name=YP_002345297.1;Parent=gene208;Note=located in the peptidyl transferase center and may be involved in peptidyl transferase activity%3B similar to archaeal L10e;Dbxref=InterPro:IPR000114,UniProtKB%2FTrEMBL:Q0WK91,Genbank:YP_002345297.1,GeneID:1173059;gbkey=CDS;gene=rplP;product=50S ribosomal protein L16;protein_id=YP_002345297.1;transl_table=11
NC_003143.1	RefSeq	region	225930	225965	.	+	.	ID=id172;Note=PS00586 Ribosomal protein L16 signature 1.;Dbxref=GeneID:1173059;gbkey=misc_feature;gene=rplP
NC_003143.1	RefSeq	region	225999	226034	.	+	.	ID=id173;Note=PS00701 Ribosomal protein L16 signature 2.;Dbxref=GeneID:1173059;gbkey=misc_feature;gene=rplP
NC_003143.1	RefSeq	gene	226169	226360	.	+	.	ID=gene209;Name=rpmC;Dbxref=GeneID:1173060;gbkey=Gene;gene=rpmC;locus_tag=YPO0218
NC_003143.1	RefSeq	CDS	226169	226360	.	+	0	ID=cds198;Name=YP_002345298.1;Parent=gene209;Note=one of the stabilizing components for the large ribosomal subunit;Dbxref=InterPro:IPR001854,UniProtKB%2FTrEMBL:Q0WK90,Genbank:YP_002345298.1,GeneID:1173060;gbkey=CDS;gene=rpmC;product=50S ribosomal protein L29;protein_id=YP_002345298.1;transl_table=11
NC_003143.1	RefSeq	region	226283	226327	.	+	.	ID=id174;Note=PS00579 Ribosomal protein L29 signature.;Dbxref=GeneID:1173060;gbkey=misc_feature;gene=rpmC
NC_003143.1	RefSeq	gene	226360	226614	.	+	.	ID=gene210;Name=rpsQ;Dbxref=GeneID:1173061;gbkey=Gene;gene=rpsQ;locus_tag=YPO0219
NC_003143.1	RefSeq	CDS	226360	226614	.	+	0	ID=cds199;Name=YP_002345299.1;Parent=gene210;Note=primary binding protein%3B helps mediate assembly%3B involved in translation fidelity;Dbxref=InterPro:IPR000266,InterPro:IPR008994,InterPro:IPR012340,UniProtKB%2FTrEMBL:Q0WK89,Genbank:YP_002345299.1,GeneID:1173061;gbkey=CDS;gene=rpsQ;product=30S ribosomal protein S17;protein_id=YP_002345299.1;transl_table=11
NC_003143.1	RefSeq	region	226525	226563	.	+	.	ID=id175;Note=PS00056 Ribosomal protein S17 signature.;Dbxref=GeneID:1173061;gbkey=misc_feature;gene=rpsQ
NC_003143.1	RefSeq	gene	226795	227166	.	+	.	ID=gene211;Name=rplN;Dbxref=GeneID:1173062;gbkey=Gene;gene=rplN;locus_tag=YPO0220
NC_003143.1	RefSeq	CDS	226795	227166	.	+	0	ID=cds200;Name=YP_002345300.1;Parent=gene211;Note=binds to the 23S rRNA between the centers for peptidyl transferase and GTPase;Dbxref=InterPro:IPR000218,InterPro:IPR005745,UniProtKB%2FTrEMBL:Q7CFT7,Genbank:YP_002345300.1,GeneID:1173062;gbkey=CDS;gene=rplN;product=50S ribosomal protein L14;protein_id=YP_002345300.1;transl_table=11
NC_003143.1	RefSeq	region	226972	227052	.	+	.	ID=id176;Note=PS00049 Ribosomal protein L14 signature.;Dbxref=GeneID:1173062;gbkey=misc_feature;gene=rplN
NC_003143.1	RefSeq	gene	227177	227491	.	+	.	ID=gene212;Name=rplX;Dbxref=GeneID:1173063;gbkey=Gene;gene=rplX;locus_tag=YPO0221
NC_003143.1	RefSeq	CDS	227177	227491	.	+	0	ID=cds201;Name=YP_002345301.1;Parent=gene212;Note=assembly initiator protein%3B binds to 5%27 end of 23S rRNA and nucleates assembly of the 50S%3B surrounds polypeptide exit tunnel;Dbxref=InterPro:IPR003256,InterPro:IPR005824,InterPro:IPR005825,InterPro:IPR006646,InterPro:IPR008991,UniProtKB%2FTrEMBL:Q0WK87,Genbank:YP_002345301.1,GeneID:1173063;gbkey=CDS;gene=rplX;product=50S ribosomal protein L24;protein_id=YP_002345301.1;transl_table=11
NC_003143.1	RefSeq	region	227198	227251	.	+	.	ID=id177;Note=PS01108 Ribosomal protein L24 signature.;Dbxref=GeneID:1173063;gbkey=misc_feature;gene=rplX
NC_003143.1	RefSeq	gene	227506	228045	.	+	.	ID=gene213;Name=rplE;Dbxref=GeneID:1173064;gbkey=Gene;gene=rplE;locus_tag=YPO0222
NC_003143.1	RefSeq	CDS	227506	228045	.	+	0	ID=cds202;Name=YP_002345302.1;Parent=gene213;Note=part of 50S and 5S%2FL5%2FL18%2FL25 subcomplex%3B contacts 5S rRNA and P site tRNA%3B forms a bridge to the 30S subunit in the ribosome by binding to S13;Dbxref=InterPro:IPR002132,InterPro:IPR003236,UniProtKB%2FTrEMBL:Q0WK86,Genbank:YP_002345302.1,GeneID:1173064;gbkey=CDS;gene=rplE;product=50S ribosomal protein L5;protein_id=YP_002345302.1;transl_table=11
NC_003143.1	RefSeq	gene	228059	228364	.	+	.	ID=gene214;Name=rpsN;Dbxref=GeneID:1173065;gbkey=Gene;gene=rpsN;locus_tag=YPO0222a
NC_003143.1	RefSeq	CDS	228059	228364	.	+	0	ID=cds203;Name=YP_002345303.1;Parent=gene214;Note=located in the peptidyl transferase center and involved in assembly of 30S ribosome subunit%3B similar to what is observed with proteins L31 and L33%2C some proteins in this family contain CXXC motifs that are involved in zinc binding%3B if two copies are present in a genome%2C then the duplicated copy appears to have lost the zinc-binding motif and is instead regulated by zinc%3B the proteins in this group do not appear to have the zinc-binding motif;Dbxref=InterPro:IPR001209,UniProtKB%2FTrEMBL:Q0WK85,Genbank:YP_002345303.1,GeneID:1173065;gbkey=CDS;gene=rpsN;product=30S ribosomal protein S14;protein_id=YP_002345303.1;transl_table=11
NC_003143.1	RefSeq	gene	228398	228790	.	+	.	ID=gene215;Name=rpsH;Dbxref=GeneID:1173066;gbkey=Gene;gene=rpsH;locus_tag=YPO0223
NC_003143.1	RefSeq	CDS	228398	228790	.	+	0	ID=cds204;Name=YP_002345304.1;Parent=gene215;Note=binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit;Dbxref=InterPro:IPR000630,UniProtKB%2FTrEMBL:Q0WK84,Genbank:YP_002345304.1,GeneID:1173066;gbkey=CDS;gene=rpsH;product=30S ribosomal protein S8;protein_id=YP_002345304.1;transl_table=11
NC_003143.1	RefSeq	region	228695	228748	.	+	.	ID=id178;Note=PS00053 Ribosomal protein S8 signature.;Dbxref=GeneID:1173066;gbkey=misc_feature;gene=rpsH
NC_003143.1	RefSeq	gene	228805	229338	.	+	.	ID=gene216;Name=rplF;Dbxref=GeneID:1173067;gbkey=Gene;gene=rplF;locus_tag=YPO0224
NC_003143.1	RefSeq	CDS	228805	229338	.	+	0	ID=cds205;Name=YP_002345305.1;Parent=gene216;Note=ribosomal protein L6 appears to have arisen as a result of an ancient gene duplication as based on structural comparison of the Bacillus stearothermophilus protein%3B RNA-binding appears to be in the C-terminal domain%3B mutations in the L6 gene confer resistance to aminoglycoside antibiotics such as gentamicin and these occur in truncations of the C-terminal domain%3B it has been localized to a region between the base of the L7%2FL12 stalk and the central protuberance;Dbxref=InterPro:IPR000702,InterPro:IPR002358,UniProtKB%2FTrEMBL:Q7CFT4,Genbank:YP_002345305.1,GeneID:1173067;gbkey=CDS;gene=rplF;product=50S ribosomal protein L6;protein_id=YP_002345305.1;transl_table=11
NC_003143.1	RefSeq	region	229264	229290	.	+	.	ID=id179;Note=PS00525 Ribosomal protein L6 signature 1.;Dbxref=GeneID:1173067;gbkey=misc_feature;gene=rplF
NC_003143.1	RefSeq	gene	229348	229701	.	+	.	ID=gene217;Name=rplR;Dbxref=GeneID:1173068;gbkey=Gene;gene=rplR;locus_tag=YPO0225
NC_003143.1	RefSeq	CDS	229348	229701	.	+	0	ID=cds206;Name=YP_002345306.1;Parent=gene217;Note=binds 5S rRNA along with protein L5 and L25;Dbxref=InterPro:IPR002197,InterPro:IPR004389,InterPro:IPR005484,UniProtKB%2FTrEMBL:Q0WK82,Genbank:YP_002345306.1,GeneID:1173068;gbkey=CDS;gene=rplR;product=50S ribosomal protein L18;protein_id=YP_002345306.1;transl_table=11
NC_003143.1	RefSeq	region	229555	229578	.	+	.	ID=id180;Note=PS00017 ATP%2FGTP-binding site motif A %28P-loop%29.;Dbxref=GeneID:1173068;gbkey=misc_feature;gene=rplR
NC_003143.1	RefSeq	gene	229716	230219	.	+	.	ID=gene218;Name=rpsE;Dbxref=GeneID:1173069;gbkey=Gene;gene=rpsE;locus_tag=YPO0226
NC_003143.1	RefSeq	CDS	229716	230219	.	+	0	ID=cds207;Name=YP_002345307.1;Parent=gene218;Note=located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body%3B contacts S4 and S8%3B with S4 and S12 plays a role in translational accuracy%3B mutations in this gene result in spectinomycin resistance;Dbxref=InterPro:IPR000851,InterPro:IPR005324,InterPro:IPR005712,InterPro:IPR013810,UniProtKB%2FTrEMBL:Q0WK81,Genbank:YP_002345307.1,GeneID:1173069;gbkey=CDS;gene=rpsE;product=30S ribosomal protein S5;protein_id=YP_002345307.1;transl_table=11
NC_003143.1	RefSeq	region	229797	229895	.	+	.	ID=id181;Note=PS00585 Ribosomal protein S5 signature.;Dbxref=GeneID:1173069;gbkey=misc_feature;gene=rpsE
NC_003143.1	RefSeq	gene	230222	230401	.	+	.	ID=gene219;Name=rpmD;Dbxref=GeneID:1173070;gbkey=Gene;gene=rpmD;locus_tag=YPO0227
NC_003143.1	RefSeq	CDS	230222	230401	.	+	0	ID=cds208;Name=YP_002345308.1;Parent=gene219;Note=L30 binds domain II of the 23S rRNA and the 5S rRNA%3B similar to eukaryotic protein L7;Dbxref=InterPro:IPR000517,InterPro:IPR005996,UniProtKB%2FTrEMBL:Q7CFT2,Genbank:YP_002345308.1,GeneID:1173070;gbkey=CDS;gene=rpmD;product=50S ribosomal protein L30;protein_id=YP_002345308.1;transl_table=11
NC_003143.1	RefSeq	region	230288	230386	.	+	.	ID=id182;Note=PS00634 Ribosomal protein L30 signature.;Dbxref=GeneID:1173070;gbkey=misc_feature;gene=rpmD
NC_003143.1	RefSeq	gene	230405	230839	.	+	.	ID=gene220;Name=rplO;Dbxref=GeneID:1173071;gbkey=Gene;gene=rplO;locus_tag=YPO0228
NC_003143.1	RefSeq	CDS	230405	230839	.	+	0	ID=cds209;Name=YP_002345309.1;Parent=gene220;Note=late assembly protein;Dbxref=InterPro:IPR001196,InterPro:IPR005749,UniProtKB%2FTrEMBL:Q0WK79,Genbank:YP_002345309.1,GeneID:1173071;gbkey=CDS;gene=rplO;product=50S ribosomal protein L15;protein_id=YP_002345309.1;transl_table=11
NC_003143.1	RefSeq	region	230729	230821	.	+	.	ID=id183;Note=PS00475 Ribosomal protein L15 signature.;Dbxref=GeneID:1173071;gbkey=misc_feature;gene=rplO
NC_003143.1	RefSeq	gene	230847	232178	.	+	.	ID=gene221;Name=secY;Dbxref=GeneID:1173072;gbkey=Gene;gene=secY;locus_tag=YPO0229
NC_003143.1	RefSeq	CDS	230847	232178	.	+	0	ID=cds210;Name=YP_002345310.1;Parent=gene221;Note=forms heterotrimeric complex in the membrane%3B in bacteria the complex consists of SecY which forms the channel pore and SecE and SecG%3B the SecG subunit is not essential%3B in bacteria translocation is driven via the SecA ATPase;Dbxref=InterPro:IPR002208,UniProtKB%2FTrEMBL:Q7CFT0,Genbank:YP_002345310.1,GeneID:1173072;gbkey=CDS;gene=secY;product=preprotein translocase subunit SecY;protein_id=YP_002345310.1;transl_table=11
NC_003143.1	RefSeq	region	231072	231131	.	+	.	ID=id184;Note=PS00755 Protein secY signature 1.;Dbxref=GeneID:1173072;gbkey=misc_feature;gene=secY
NC_003143.1	RefSeq	region	231363	231419	.	+	.	ID=id185;Note=PS00756 Protein secY signature 2.;Dbxref=GeneID:1173072;gbkey=misc_feature;gene=secY
NC_003143.1	RefSeq	gene	232212	232328	.	+	.	ID=gene222;Name=rpmJ;Dbxref=GeneID:1173073;gbkey=Gene;gene=rpmJ;locus_tag=YPO0230
NC_003143.1	RefSeq	CDS	232212	232328	.	+	0	ID=cds211;Name=YP_002345311.1;Parent=gene222;Note=smallest protein in the large subunit%3B similar to what is found with protein L31 and L33 several bacterial genomes contain paralogs which may be regulated by zinc%3B the protein from Thermus thermophilus has a zinc-binding motif and contains a bound zinc ion%3B the proteins in this group have the motif;Dbxref=InterPro:IPR000473,UniProtKB%2FTrEMBL:Q0WK77,Genbank:YP_002345311.1,GeneID:1173073;gbkey=CDS;gene=rpmJ;product=50S ribosomal protein L36;protein_id=YP_002345311.1;transl_table=11
NC_003143.1	RefSeq	region	232242	232322	.	+	.	ID=id186;Note=PS00828 Ribosomal protein L36 signature.;Dbxref=GeneID:1173073;gbkey=misc_feature;gene=rpmJ
NC_003143.1	RefSeq	gene	232476	232832	.	+	.	ID=gene223;Name=rpsM;Dbxref=GeneID:1173074;gbkey=Gene;gene=rpsM;locus_tag=YPO0231
NC_003143.1	RefSeq	CDS	232476	232832	.	+	0	ID=cds212;Name=YP_002345312.1;Parent=gene223;Note=located at the top of the head of the 30S subunit%2C it contacts several helices of the 16S rRNA%3B makes contact with the large subunit via RNA-protein interactions and via protein-protein interactions with L5%3B contacts P-site tRNA;Dbxref=InterPro:IPR001892,InterPro:IPR010979,UniProtKB%2FTrEMBL:Q0WK76,Genbank:YP_002345312.1,GeneID:1173074;gbkey=CDS;gene=rpsM;product=30S ribosomal protein S13;protein_id=YP_002345312.1;transl_table=11
NC_003143.1	RefSeq	region	232734	232775	.	+	.	ID=id187;Note=PS00646 Ribosomal protein S13 signature.;Dbxref=GeneID:1173074;gbkey=misc_feature;gene=rpsM
NC_003143.1	RefSeq	gene	232849	233238	.	+	.	ID=gene224;Name=rpsK;Dbxref=GeneID:1173075;gbkey=Gene;gene=rpsK;locus_tag=YPO0232
NC_003143.1	RefSeq	CDS	232849	233238	.	+	0	ID=cds213;Name=YP_002345313.1;Parent=gene224;Note=located on the platform of the 30S subunit%2C it bridges several disparate RNA helices of the 16S rRNA%3B forms part of the Shine-Dalgarno cleft in the 70S ribosome%3B interacts with S7 and S18 and IF-3;Dbxref=InterPro:IPR001971,UniProtKB%2FTrEMBL:Q0WK75,Genbank:YP_002345313.1,GeneID:1173075;gbkey=CDS;gene=rpsK;product=30S ribosomal protein S11;protein_id=YP_002345313.1;transl_table=11
NC_003143.1	RefSeq	region	233137	233205	.	+	.	ID=id188;Note=PS00054 Ribosomal protein S11 signature.;Dbxref=GeneID:1173075;gbkey=misc_feature;gene=rpsK
NC_003143.1	RefSeq	gene	233269	233889	.	+	.	ID=gene225;Name=rpsD;Dbxref=GeneID:1173076;gbkey=Gene;gene=rpsD;locus_tag=YPO0233
NC_003143.1	RefSeq	CDS	233269	233889	.	+	0	ID=cds214;Name=YP_002345314.1;Parent=gene225;Note=primary rRNA binding protein%3B nucleates 30S assembly%3B involved in translational accuracy with proteins S5 and S12%3B interacts with protein S5%3B involved in autogeneously regulating ribosomal proteins by binding to pseudoknot structures in the polycistronic mRNA%3B interacts with transcription complex and functions similar to protein NusA in antitermination;Dbxref=InterPro:IPR001912,InterPro:IPR002942,InterPro:IPR005709,UniProtKB%2FTrEMBL:Q0WK74,Genbank:YP_002345314.1,GeneID:1173076;gbkey=CDS;gene=rpsD;product=30S ribosomal protein S4;protein_id=YP_002345314.1;transl_table=11
NC_003143.1	RefSeq	region	233548	233622	.	+	.	ID=id189;Note=PS00632 Ribosomal protein S4 signature.;Dbxref=GeneID:1173076;gbkey=misc_feature;gene=rpsD
NC_003143.1	RefSeq	gene	233915	234904	.	+	.	ID=gene226;Name=rpoA;Dbxref=GeneID:1173077;gbkey=Gene;gene=rpoA;locus_tag=YPO0234
NC_003143.1	RefSeq	CDS	233915	234904	.	+	0	ID=cds215;Name=YP_002345315.1;Parent=gene226;Note=catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Dimerization of the alpha subunit is the first step in the sequential assembly of subunits to form the holoenzyme;Dbxref=InterPro:IPR009025,InterPro:IPR011260,InterPro:IPR011261,InterPro:IPR011262,InterPro:IPR011263,InterPro:IPR011773,UniProtKB%2FTrEMBL:Q0WK73,Genbank:YP_002345315.1,GeneID:1173077;gbkey=CDS;gene=rpoA;product=DNA-directed RNA polymerase subunit alpha;protein_id=YP_002345315.1;transl_table=11
NC_003143.1	RefSeq	gene	234945	235334	.	+	.	ID=gene227;Name=rplQ;Dbxref=GeneID:1173078;gbkey=Gene;gene=rplQ;locus_tag=YPO0235
NC_003143.1	RefSeq	CDS	234945	235334	.	+	0	ID=cds216;Name=YP_002345316.1;Parent=gene227;Note=is a component of the macrolide binding site in the peptidyl transferase center;Dbxref=InterPro:IPR000456,UniProtKB%2FTrEMBL:Q7CFS8,Genbank:YP_002345316.1,GeneID:1173078;gbkey=CDS;gene=rplQ;product=50S ribosomal protein L17;protein_id=YP_002345316.1;transl_table=11
NC_003143.1	RefSeq	region	235044	235112	.	+	.	ID=id190;Note=PS01167 Ribosomal protein L17 signature.;Dbxref=GeneID:1173078;gbkey=misc_feature;gene=rplQ
NC_003143.1	RefSeq	gene	235781	236206	.	+	.	ID=gene228;Name=zntR;Dbxref=GeneID:1173079;gbkey=Gene;gene=zntR;locus_tag=YPO0236
NC_003143.1	RefSeq	CDS	235781	236206	.	+	0	ID=cds217;Name=YP_002345317.1;Parent=gene228;Note=mediates expression of the zinc export protein ZntA in response to high levels of zinc%3B member of MerR family of transcriptional regulators;Dbxref=InterPro:IPR000551,InterPro:IPR009061,InterPro:IPR011788,UniProtKB%2FTrEMBL:Q0WK71,Genbank:YP_002345317.1,GeneID:1173079;gbkey=CDS;gene=zntR;product=zinc-responsive transcriptional regulator;protein_id=YP_002345317.1;transl_table=11
NC_003143.1	RefSeq	region	235784	235849	.	+	.	ID=id191;Note=Predicted helix-turn-helix motif with score 1795 %28%2B5.30 SD%29 at aa 5-26%2C sequence LKIGQLAKLADVTPDTIRYYEK;Dbxref=GeneID:1173079;gbkey=misc_feature;gene=zntR
NC_003143.1	RefSeq	region	235793	235861	.	+	.	ID=id192;Note=PS00552 Bacterial regulatory proteins%2C merR family signature.;Dbxref=GeneID:1173079;gbkey=misc_feature;gene=zntR
NC_003143.1	RefSeq	gene	236294	236494	.	+	.	ID=gene229;Name=YPO0237;Dbxref=GeneID:1173080;gbkey=Gene;locus_tag=YPO0237
NC_003143.1	RefSeq	CDS	236294	236494	.	+	0	ID=cds218;Name=YP_002345318.1;Parent=gene229;Dbxref=InterPro:IPR005589,UniProtKB%2FTrEMBL:Q7CFS7,Genbank:YP_002345318.1,GeneID:1173080;gbkey=CDS;product=hypothetical protein;protein_id=YP_002345318.1;transl_table=11
NC_003143.1	RefSeq	gene	236604	237017	.	-	.	ID=gene230;Name=mscL;Dbxref=GeneID:1173081;gbkey=Gene;gene=mscL;locus_tag=YPO0238
NC_003143.1	RefSeq	CDS	236604	237017	.	-	0	ID=cds219;Name=YP_002345319.1;Parent=gene230;Note=forms homopentamer%3B channel that opens in response to pressure or hypoosmotic shock;Dbxref=InterPro:IPR001185,UniProtKB%2FTrEMBL:Q0WK69,Genbank:YP_002345319.1,GeneID:1173081;gbkey=CDS;gene=mscL;product=large-conductance mechanosensitive channel;protein_id=YP_002345319.1;transl_table=11
NC_003143.1	RefSeq	region	236940	236981	.	-	.	ID=id193;Note=PS01327 Large-conductance mechanosensitive channels mscL family signature.;Dbxref=GeneID:1173081;gbkey=misc_feature;gene=mscL
NC_003143.1	RefSeq	gene	237156	238532	.	-	.	ID=gene231;Name=trkA;Dbxref=GeneID:1173082;gbkey=Gene;gene=trkA;locus_tag=YPO0239
NC_003143.1	RefSeq	CDS	237156	238532	.	-	0	ID=cds220;Name=YP_002345320.1;Parent=gene231;Note=involved in potassium uptake%3B found to be peripherally associated with the inner membrane in Escherichia coli%3B contains an NAD-binding domain;Dbxref=InterPro:IPR003148,InterPro:IPR006036,InterPro:IPR006037,UniProtKB%2FTrEMBL:Q7CFS6,Genbank:YP_002345320.1,GeneID:1173082;gbkey=CDS;gene=trkA;product=potassium transporter peripheral membrane component;protein_id=YP_002345320.1;transl_table=11
NC_003143.1	RefSeq	gene	238588	239877	.	-	.	ID=gene232;Name=YPO0240;Dbxref=GeneID:1173083;gbkey=Gene;locus_tag=YPO0240
NC_003143.1	RefSeq	CDS	238588	239877	.	-	0	ID=cds221;Name=YP_002345321.1;Parent=gene232;Note=catalyzes the methylation of cytosine at position 967 %28m5C967%29 of 16S rRNA%3B SAM-dependent methyltransferase;Dbxref=InterPro:IPR001678,InterPro:IPR004573,InterPro:IPR006027,InterPro:IPR006174,UniProtKB%2FTrEMBL:Q0WK67,Genbank:YP_002345321.1,GeneID:1173083;gbkey=CDS;product=16S rRNA methyltransferase GidB;protein_id=YP_002345321.1;transl_table=11
NC_003143.1	RefSeq	region	238897	238932	.	-	.	ID=id194;Note=PS01153 NOL1%2FNOP2%2Fsun family signature.;Dbxref=GeneID:1173083;gbkey=misc_feature
NC_003143.1	RefSeq	gene	239971	240918	.	-	.	ID=gene233;Name=fmt;Dbxref=GeneID:1173084;gbkey=Gene;gene=fmt;locus_tag=YPO0241
NC_003143.1	RefSeq	CDS	239971	240918	.	-	0	ID=cds222;Name=YP_002345322.1;Parent=gene233;Note=modifies the free amino group of the aminoacyl moiety of methionyl-tRNA%28fMet%29 which is important in translation initiation%3B inactivation of this gene in Escherichia coli severely impairs growth;Dbxref=InterPro:IPR001555,InterPro:IPR002376,InterPro:IPR005793,InterPro:IPR005794,InterPro:IPR011034,UniProtKB%2FTrEMBL:Q0WK66,Genbank:YP_002345322.1,GeneID:1173084;gbkey=CDS;gene=fmt;product=methionyl-tRNA formyltransferase;protein_id=YP_002345322.1;transl_table=11
NC_003143.1	RefSeq	gene	240943	241455	.	-	.	ID=gene234;Name=def;Dbxref=GeneID:1173085;gbkey=Gene;gene=def;gene_synonym=fms;locus_tag=YPO0242
NC_003143.1	RefSeq	CDS	240943	241455	.	-	0	ID=cds223;Name=YP_002345323.1;Parent=gene234;Note=cleaves off formyl group from N-terminal methionine residues of newly synthesized proteins%3B binds iron%282%2B%29;Dbxref=InterPro:IPR000181,UniProtKB%2FTrEMBL:Q0WK65,Genbank:YP_002345323.1,GeneID:1173085;gbkey=CDS;gene=def;product=peptide deformylase;protein_id=YP_002345323.1;transl_table=11
NC_003143.1	RefSeq	gene	241590	242711	.	+	.	ID=gene235;Name=YPO0243;Dbxref=GeneID:1173086;gbkey=Gene;locus_tag=YPO0243
NC_003143.1	RefSeq	CDS	241590	242711	.	+	0	ID=cds224;Name=YP_002345324.1;Parent=gene235;Dbxref=InterPro:IPR003488,UniProtKB%2FTrEMBL:Q7CFS4,Genbank:YP_002345324.1,GeneID:1173086;gbkey=CDS;product=DNA protecting protein DprA;protein_id=YP_002345324.1;transl_table=11
NC_003143.1	RefSeq	gene	242719	243156	.	+	.	ID=gene236;Name=YPO0244;Dbxref=GeneID:1173087;gbkey=Gene;locus_tag=YPO0244
NC_003143.1	RefSeq	CDS	242719	243156	.	+	0	ID=cds225;Name=YP_002345325.1;Parent=gene236;Dbxref=InterPro:IPR007456,UniProtKB%2FTrEMBL:Q0WK63,Genbank:YP_002345325.1,GeneID:1173087;gbkey=CDS;product=hypothetical protein;protein_id=YP_002345325.1;transl_table=11
NC_003143.1	RefSeq	gene	243197	243736	.	+	.	ID=gene237;Name=YPO0245;Dbxref=GeneID:1173088;gbkey=Gene;locus_tag=YPO0245
NC_003143.1	RefSeq	CDS	243197	243736	.	+	0	ID=cds226;Name=YP_002345326.1;Parent=gene237;Dbxref=InterPro:IPR013498,UniProtKB%2FTrEMBL:Q0WK62,Genbank:YP_002345326.1,GeneID:1173088;gbkey=CDS;product=DNA-binding protein;protein_id=YP_002345326.1;transl_table=11
NC_003143.1	RefSeq	gene	243738	244310	.	+	.	ID=gene238;Name=YPO0245a;Dbxref=GeneID:1173089;gbkey=Gene;locus_tag=YPO0245a
NC_003143.1	RefSeq	CDS	243738	244310	.	+	0	ID=cds227;Name=YP_002345327.1;Parent=gene238;Note=RimN%3B YrdC%3B required for maturation of 16s RNA%3B binds preferentially double stranded RNA;Dbxref=InterPro:IPR006070,InterPro:IPR012200,UniProtKB%2FTrEMBL:Q74XX5,Genbank:YP_002345327.1,GeneID:1173089;gbkey=CDS;product=ribosome maturation factor;protein_id=YP_002345327.1;transl_table=11
NC_003143.1	RefSeq	region	243801	243839	.	+	.	ID=id195;Note=PS01147 SUA5%2FyciO%2FyrdC family signature.;Dbxref=GeneID:1173089;gbkey=misc_feature
NC_003143.1	RefSeq	gene	244319	245140	.	+	.	ID=gene239;Name=aroE;Dbxref=GeneID:1173090;gbkey=Gene;gene=aroE;locus_tag=YPO0246
NC_003143.1	RefSeq	CDS	244319	245140	.	+	0	ID=cds228;Name=YP_002345328.1;Parent=gene239;Note=AroE%3B catalyzes the conversion of shikimate to 3-dehydroshikimate;Dbxref=InterPro:IPR006151,InterPro:IPR011342,InterPro:IPR013708,UniProtKB%2FTrEMBL:Q0WK60,Genbank:YP_002345328.1,GeneID:1173090;gbkey=CDS;gene=aroE;product=shikimate 5-dehydrogenase;protein_id=YP_002345328.1;transl_table=11
NC_003143.1	RefSeq	gene	245195	245776	.	-	.	ID=gene240;Name=YPO0247;Dbxref=GeneID:1173091;gbkey=Gene;locus_tag=YPO0247
NC_003143.1	RefSeq	CDS	245195	245776	.	-	0	ID=cds229;Name=YP_008479676.1;Parent=gene240;Dbxref=Genbank:YP_008479676.1,GeneID:1173091;gbkey=CDS;product=transferase;protein_id=YP_008479676.1;transl_table=11
NC_003143.1	RefSeq	repeat_region	245726	247679	.	-	.	ID=id196;Note=insertion sequence:IS100;gbkey=repeat_region
NC_003143.1	RefSeq	repeat_region	245726	245753	.	+	.	ID=id197;Note=IS100 inverted repeat;gbkey=repeat_region
NC_003143.1	RefSeq	gene	245792	246574	.	-	.	ID=gene241;Name=YPO0248;Note=ypmt1.57c;Dbxref=GeneID:1173092;gbkey=Gene;locus_tag=YPO0248
NC_003143.1	RefSeq	CDS	245792	246574	.	-	0	ID=cds230;Name=YP_002345329.1;Parent=gene241;Dbxref=InterPro:IPR001270,InterPro:IPR002611,InterPro:IPR003593,UniProtKB%2FTrEMBL:Q7ARK4,Genbank:YP_002345329.1,GeneID:1173092;gbkey=CDS;product=transposase%2FIS protein;protein_id=YP_002345329.1;transl_table=11
NC_003143.1	RefSeq	region	246224	246247	.	-	.	ID=id198;Note=PS00017 ATP%2FGTP-binding site motif A %28P-loop%29.;Dbxref=GeneID:1173092;gbkey=misc_feature
NC_003143.1	RefSeq	gene	246571	247593	.	-	.	ID=gene242;Name=y1093;Dbxref=GeneID:1173093;gbkey=Gene;gene=y1093;gene_synonym=ypmt1;locus_tag=YPO0249
NC_003143.1	RefSeq	CDS	246571	247593	.	-	0	ID=cds231;Name=YP_002345330.1;Parent=gene242;Dbxref=InterPro:IPR001584,InterPro:IPR006120,InterPro:IPR009057,InterPro:IPR012287,InterPro:IPR012337,UniProtKB%2FTrEMBL:Q7ARN5,Genbank:YP_002345330.1,GeneID:1173093;gbkey=CDS;gene=y1093;product=transposase for insertion sequence IS100;protein_id=YP_002345330.1;transl_table=11
NC_003143.1	RefSeq	region	247477	247542	.	-	.	ID=id199;Note=Predicted helix-turn-helix motif with score 2147 %28%2B6.50 SD%29 at aa 18-39%2C sequence MSSRAIARELGISRNTVKRYLQ;Dbxref=GeneID:1173093;gbkey=misc_feature;gene=y1093
NC_003143.1	RefSeq	gene	247646	248638	.	+	.	ID=gene243;Name=YPO0250;Dbxref=GeneID:1173094;gbkey=Gene;locus_tag=YPO0250
NC_003143.1	RefSeq	CDS	247646	248638	.	+	0	ID=cds232;Name=YP_008479677.1;Parent=gene243;Dbxref=Genbank:YP_008479677.1,GeneID:1173094;gbkey=CDS;product=hydrolase;protein_id=YP_008479677.1;transl_table=11
NC_003143.1	RefSeq	repeat_region	247652	247679	.	-	.	ID=id200;Note=IS100 inverted repeat;gbkey=repeat_region
NC_003143.1	RefSeq	gene	248712	250367	.	-	.	ID=gene244;Name=actP;Dbxref=GeneID:1173095;gbkey=Gene;gene=actP;locus_tag=YPO0251
NC_003143.1	RefSeq	CDS	248712	250367	.	-	0	ID=cds233;Name=YP_002345331.1;Parent=gene244;Note=member of the sodium:solute symporter family%3B cotranscribed with the acs gene which encodes acetyl coenzyme A synthase%3B mutations affect acetate uptake;Dbxref=InterPro:IPR001734,UniProtKB%2FTrEMBL:Q0WK57,Genbank:YP_002345331.1,GeneID:1173095;gbkey=CDS;gene=actP;product=acetate permease;protein_id=YP_002345331.1;transl_table=11
NC_003143.1	RefSeq	region	249756	249833	.	-	.	ID=id201;Note=PS00456 Sodium:solute symporter family signature 1.;Dbxref=GeneID:1173095;gbkey=misc_feature;gene=actP
NC_003143.1	RefSeq	gene	250364	250675	.	-	.	ID=gene245;Name=actP;Dbxref=GeneID:1173096;gbkey=Gene;gene=actP;locus_tag=YPO0252
NC_003143.1	RefSeq	CDS	250364	250675	.	-	0	ID=cds234;Name=YP_002345332.1;Parent=gene245;Dbxref=InterPro:IPR007436,UniProtKB%2FTrEMBL:Q7CKS8,Genbank:YP_002345332.1,GeneID:1173096;gbkey=CDS;product=hypothetical protein;protein_id=YP_002345332.1;transl_table=11
NC_003143.1	RefSeq	gene	250732	252690	.	-	.	ID=gene246;Name=acs;Dbxref=GeneID:1173097;gbkey=Gene;gene=acs;locus_tag=YPO0253
NC_003143.1	RefSeq	CDS	250732	252690	.	-	0	ID=cds235;Name=YP_002345333.1;Parent=gene246;Note=Acs%3B catalyzes the conversion of acetate and CoA to acetyl-CoA;Dbxref=InterPro:IPR000873,InterPro:IPR011904,UniProtKB%2FTrEMBL:Q0WK55,Genbank:YP_002345333.1,GeneID:1173097;gbkey=CDS;gene=acs;product=acetyl-CoA synthetase;protein_id=YP_002345333.1;transl_table=11
NC_003143.1	RefSeq	region	251875	251910	.	-	.	ID=id202;Note=PS00455  AMP-binding domain signature.;Dbxref=GeneID:1173097;gbkey=misc_feature;gene=acs
NC_003143.1	RefSeq	gene	253545	254861	.	+	.	ID=gene247;Name=gltP;Dbxref=GeneID:1173098;gbkey=Gene;gene=gltP;locus_tag=YPO0254
NC_003143.1	RefSeq	CDS	253545	254861	.	+	0	ID=cds236;Name=YP_002345334.1;Parent=gene247;Note=carrier protein part of the Na%28%2B%29-independent%2C binding-protein-independent glutamate-aspartate transport system;Dbxref=InterPro:IPR001991,UniProtKB%2FTrEMBL:Q7CKS7,Genbank:YP_002345334.1,GeneID:1173098;gbkey=CDS;gene=gltP;product=glutamate%2Faspartate:proton symporter;protein_id=YP_002345334.1;transl_table=11
NC_003143.1	RefSeq	region	253671	253718	.	+	.	ID=id203;Note=PS00713 Sodium:dicarboxylate symporter family signature 1.;Dbxref=GeneID:1173098;gbkey=misc_feature;gene=gltP
NC_003143.1	RefSeq	region	254460	254531	.	+	.	ID=id204;Note=PS00714 Sodium:dicarboxylate symporter family signature 2.;Dbxref=GeneID:1173098;gbkey=misc_feature;gene=gltP
NC_003143.1	RefSeq	region	255039	273457	.	-	.	ID=id205;Note=Region encoding a type III ssecretion system which is shares a high degree of synteny and a significant level of sequence identity with the type III secretion system carried on the Salmonella typhi pathogenicity island 2.;gbkey=misc_feature
NC_003143.1	RefSeq	gene	255039	255671	.	-	.	ID=gene248;Name=YPO0255;Dbxref=GeneID:1173099;gbkey=Gene;locus_tag=YPO0255
NC_003143.1	RefSeq	CDS	255039	255671	.	-	0	ID=cds237;Name=YP_002345335.1;Parent=gene248;Dbxref=InterPro:IPR000792,InterPro:IPR001789,InterPro:IPR011006,InterPro:IPR011991,UniProtKB%2FTrEMBL:Q7CKS6,Genbank:YP_002345335.1,GeneID:1173099;gbkey=CDS;product=two-component response regulator;protein_id=YP_002345335.1;transl_table=11
NC_003143.1	RefSeq	region	255102	255185	.	-	.	ID=id206;Note=PS00622 Bacterial regulatory proteins%2C luxR family signature.;Dbxref=GeneID:1173099;gbkey=misc_feature
NC_003143.1	RefSeq	gene	255684	258503	.	-	.	ID=gene249;Name=YPO0256;Dbxref=GeneID:1173100;gbkey=Gene;locus_tag=YPO0256
NC_003143.1	RefSeq	CDS	255684	258503	.	-	0	ID=cds238;Name=YP_002345336.1;Parent=gene249;Dbxref=InterPro:IPR001789,InterPro:IPR003594,InterPro:IPR003660,InterPro:IPR003661,InterPro:IPR004358,InterPro:IPR005467,InterPro:IPR008207,InterPro:IPR009082,InterPro:IPR011006,UniProtKB%2FTrEMBL:Q0WK52,Genbank:YP_002345336.1,GeneID:1173100;gbkey=CDS;product=two-component sensor%2Fregulator;protein_id=YP_002345336.1;transl_table=11
NC_003143.1	RefSeq	gene	258675	260246	.	+	.	ID=gene250;Name=YPO0257;Dbxref=GeneID:1173101;gbkey=Gene;locus_tag=YPO0257
NC_003143.1	RefSeq	CDS	258675	260246	.	+	0	ID=cds239;Name=YP_002345337.1;Parent=gene250;Dbxref=InterPro:IPR003522,InterPro:IPR004845,InterPro:IPR004846,InterPro:IPR005644,UniProtKB%2FTrEMBL:Q7CKS5,Genbank:YP_002345337.1,GeneID:1173101;gbkey=CDS;product=type III secretion protein;protein_id=YP_002345337.1;transl_table=11
NC_003143.1	RefSeq	region	258735	258803	.	+	.	ID=id207;Note=1 probable transmembrane helix predicted;Dbxref=GeneID:1173101;gbkey=misc_feature
NC_003143.1	RefSeq	region	260067	260168	.	+	.	ID=id208;Note=PS00875 Bacterial type II secretion system protein D signature.;Dbxref=GeneID:1173101;gbkey=misc_feature
NC_003143.1	RefSeq	gene	260248	261462	.	+	.	ID=gene251;Name=YPO0258;Dbxref=GeneID:1173102;gbkey=Gene;locus_tag=YPO0258
NC_003143.1	RefSeq	CDS	260248	261462	.	+	0	ID=cds240;Name=YP_002345338.1;Parent=gene251;Dbxref=InterPro:IPR012843,UniProtKB%2FTrEMBL:Q0WK50,Genbank:YP_002345338.1,GeneID:1173102;gbkey=CDS;product=type-III secretion protein;protein_id=YP_002345338.1;transl_table=11
NC_003143.1	RefSeq	region	260575	260643	.	+	.	ID=id209;Note=1 probable transmembrane helix predicted;Dbxref=GeneID:1173102;gbkey=misc_feature
NC_003143.1	RefSeq	gene	261481	261702	.	+	.	ID=gene252;Name=YPO0259;Dbxref=GeneID:1173103;gbkey=Gene;locus_tag=YPO0259
NC_003143.1	RefSeq	CDS	261481	261702	.	+	0	ID=cds241;Name=YP_002345339.1;Parent=gene252;Dbxref=InterPro:IPR012671,UniProtKB%2FTrEMBL:Q7CKS4,Genbank:YP_002345339.1,GeneID:1173103;gbkey=CDS;product=type III secretion apparatus;protein_id=YP_002345339.1;transl_table=11
NC_003143.1	RefSeq	gene	262506	262721	.	+	.	ID=gene253;Name=YPO0260a;Dbxref=GeneID:1173105;gbkey=Gene;locus_tag=YPO0260a
NC_003143.1	RefSeq	CDS	262506	262721	.	+	0	ID=cds242;Name=YP_002345341.1;Parent=gene253;Dbxref=InterPro:IPR011841,UniProtKB%2FTrEMBL:Q74XK4,Genbank:YP_002345341.1,GeneID:1173105;gbkey=CDS;product=type III secretion apparatus;protein_id=YP_002345341.1;transl_table=11
NC_003143.1	RefSeq	gene	262718	262966	.	+	.	ID=gene254;Name=YPO0261;Dbxref=GeneID:1173106;gbkey=Gene;locus_tag=YPO0261
NC_003143.1	RefSeq	CDS	262718	262966	.	+	0	ID=cds243;Name=YP_002345342.1;Parent=gene254;Dbxref=InterPro:IPR010437,UniProtKB%2FTrEMBL:Q7CKS2,Genbank:YP_002345342.1,GeneID:1173106;gbkey=CDS;product=type III secretion apparatus;protein_id=YP_002345342.1;transl_table=11
NC_003143.1	RefSeq	gene	263064	263315	.	+	.	ID=gene255;Name=YPO0262;Dbxref=GeneID:1173107;gbkey=Gene;locus_tag=YPO0262
NC_003143.1	RefSeq	CDS	263064	263315	.	+	0	ID=cds244;Name=YP_002345343.1;Parent=gene255;Dbxref=InterPro:IPR012670,UniProtKB%2FTrEMBL:Q74XK2,Genbank:YP_002345343.1,GeneID:1173107;gbkey=CDS;product=type III secretion apparatus;protein_id=YP_002345343.1;transl_table=11
NC_003143.1	RefSeq	gene	263312	264043	.	+	.	ID=gene256;Name=YPO0263;Dbxref=GeneID:1173108;gbkey=Gene;locus_tag=YPO0263
NC_003143.1	RefSeq	CDS	263312	264043	.	+	0	ID=cds245;Name=YP_002345344.1;Parent=gene256;Dbxref=InterPro:IPR003282,InterPro:IPR006182,UniProtKB%2FTrEMBL:Q74XK1,Genbank:YP_002345344.1,GeneID:1173108;gbkey=CDS;product=type III secretion system apparatus lipoprotein;protein_id=YP_002345344.1;transl_table=11
NC_003143.1	RefSeq	region	263339	263371	.	+	.	ID=id210;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site.;Dbxref=GeneID:1173108;gbkey=misc_feature
NC_003143.1	RefSeq	region	263963	264031	.	+	.	ID=id211;Note=1 probable transmembrane helix predicted;Dbxref=GeneID:1173108;gbkey=misc_feature
NC_003143.1	RefSeq	gene	264218	264811	.	+	.	ID=gene257;Name=YPO0264;Dbxref=GeneID:1173109;gbkey=Gene;locus_tag=YPO0264
NC_003143.1	RefSeq	CDS	264218	264811	.	+	0	ID=cds246;Name=YP_002345345.1;Parent=gene257;Dbxref=UniProtKB%2FTrEMBL:Q0WK43,Genbank:YP_002345345.1,GeneID:1173109;gbkey=CDS;product=hypothetical protein;protein_id=YP_002345345.1;transl_table=11
NC_003143.1	RefSeq	gene	264808	265455	.	+	.	ID=gene258;Name=YPO0265;Dbxref=GeneID:1173110;gbkey=Gene;locus_tag=YPO0265
NC_003143.1	RefSeq	CDS	264808	265455	.	+	0	ID=cds247;Name=YP_002345346.1;Parent=gene258;Dbxref=InterPro:IPR012842,UniProtKB%2FTrEMBL:Q0WK42,Genbank:YP_002345346.1,GeneID:1173110;gbkey=CDS;product=type III secretion system apparatus protein;protein_id=YP_002345346.1;transl_table=11
NC_003143.1	RefSeq	gene	265448	267496	.	+	.	ID=gene259;Name=YPO0266;Dbxref=GeneID:1173111;gbkey=Gene;locus_tag=YPO0266
NC_003143.1	RefSeq	CDS	265448	267496	.	+	0	ID=cds248;Name=YP_002345347.1;Parent=gene259;Note=with SsaC forms part of a protein export system across the inner and outer cell membranes%3B part of the Salmonella pathogenicity island 2%3B part of the type III secretion system;Dbxref=InterPro:IPR001712,InterPro:IPR006302,InterPro:IPR008948,UniProtKB%2FTrEMBL:Q0WK41,Genbank:YP_002345347.1,GeneID:1173111;gbkey=CDS;product=secretion system apparatus protein SsaV;protein_id=YP_002345347.1;transl_table=11
NC_003143.1	RefSeq	region	265862	265933	.	+	.	ID=id212;Note=PS00994 Bacterial export FHIPEP family signature.;Dbxref=GeneID:1173111;gbkey=misc_feature
NC_003143.1	RefSeq	gene	267483	268820	.	+	.	ID=gene260;Name=YPO0267;Dbxref=GeneID:1173112;gbkey=Gene;locus_tag=YPO0267
NC_003143.1	RefSeq	CDS	267483	268820	.	+	0	ID=cds249;Name=YP_002345348.1;Parent=gene260;Dbxref=InterPro:IPR000194,InterPro:IPR003593,InterPro:IPR004100,InterPro:IPR005714,InterPro:IPR013380,UniProtKB%2FTrEMBL:Q7CKS1,Genbank:YP_002345348.1,GeneID:1173112;gbkey=CDS;product=type III secretion system ATPase;protein_id=YP_002345348.1;transl_table=11
NC_003143.1	RefSeq	region	267990	268013	.	+	.	ID=id213;Note=PS00017 ATP%2FGTP-binding site motif A %28P-loop%29.;Dbxref=GeneID:1173112;gbkey=misc_feature
NC_003143.1	RefSeq	region	268530	268559	.	+	.	ID=id214;Note=PS00152 ATP synthase alpha and beta subunits signature.;Dbxref=GeneID:1173112;gbkey=misc_feature
NC_003143.1	RefSeq	gene	268817	269218	.	+	.	ID=gene261;Name=YPO0268;Dbxref=GeneID:1173113;gbkey=Gene;locus_tag=YPO0268
NC_003143.1	RefSeq	CDS	268817	269218	.	+	0	ID=cds250;Name=YP_002345349.1;Parent=gene261;Dbxref=UniProtKB%2FTrEMBL:Q7CKS0,Genbank:YP_002345349.1,GeneID:1173113;gbkey=CDS;product=type III secretion system apparatus protein;protein_id=YP_002345349.1;transl_table=11
NC_003143.1	RefSeq	gene	269617	270537	.	+	.	ID=gene262;Name=YPO0269;Dbxref=GeneID:1173115;gbkey=Gene;locus_tag=YPO0269
NC_003143.1	RefSeq	CDS	269617	270537	.	+	0	ID=cds251;Name=YP_002345351.1;Parent=gene262;Dbxref=InterPro:IPR001172,InterPro:IPR001543,InterPro:IPR013385,UniProtKB%2FTrEMBL:Q0WK37,Genbank:YP_002345351.1,GeneID:1173115;gbkey=CDS;product=type III secretion system protein;protein_id=YP_002345351.1;transl_table=11
NC_003143.1	RefSeq	gene	270664	271314	.	+	.	ID=gene263;Name=YPO0270;Dbxref=GeneID:1173116;gbkey=Gene;locus_tag=YPO0270
NC_003143.1	RefSeq	CDS	270664	271314	.	+	0	ID=cds252;Name=YP_002345352.1;Parent=gene263;Note=part of a set of proteins involved in the infection of eukaryotic cells%3B in plant pathogens involved in the hypersensitivity response;Dbxref=InterPro:IPR005773,InterPro:IPR005837,InterPro:IPR005838,UniProtKB%2FTrEMBL:Q0WK36,Genbank:YP_002345352.1,GeneID:1173116;gbkey=CDS;product=type III secretion system protein;protein_id=YP_002345352.1;transl_table=11
NC_003143.1	RefSeq	region	271093	271140	.	+	.	ID=id215;Note=PS01060 Flagella transport protein fliP family signature 1.;Dbxref=GeneID:1173116;gbkey=misc_feature
NC_003143.1	RefSeq	region	271237	271275	.	+	.	ID=id216;Note=PS01061 Flagella transport protein fliP family signature 2.;Dbxref=GeneID:1173116;gbkey=misc_feature
NC_003143.1	RefSeq	gene	271311	271604	.	+	.	ID=gene264;Name=YPO0271;Dbxref=GeneID:1173117;gbkey=Gene;locus_tag=YPO0271
NC_003143.1	RefSeq	CDS	271311	271604	.	+	0	ID=cds253;Name=YP_002345353.1;Parent=gene264;Dbxref=InterPro:IPR002191,InterPro:IPR006306,UniProtKB%2FTrEMBL:Q74XJ2,Genbank:YP_002345353.1,GeneID:1173117;gbkey=CDS;product=type III secretion apparatus protein;protein_id=YP_002345353.1;transl_table=11
NC_003143.1	RefSeq	gene	271606	272400	.	+	.	ID=gene265;Name=YPO0272;Dbxref=GeneID:1173118;gbkey=Gene;locus_tag=YPO0272
NC_003143.1	RefSeq	CDS	271606	272400	.	+	0	ID=cds254;Name=YP_002345354.1;Parent=gene265;Dbxref=InterPro:IPR002010,InterPro:IPR006304,UniProtKB%2FTrEMBL:Q7CKR9,Genbank:YP_002345354.1,GeneID:1173118;gbkey=CDS;product=type III secretion apparatus protein;protein_id=YP_002345354.1;transl_table=11
NC_003143.1	RefSeq	gene	272390	273457	.	+	.	ID=gene266;Name=YPO0273;Dbxref=GeneID:1173119;gbkey=Gene;locus_tag=YPO0273
NC_003143.1	RefSeq	CDS	272390	273457	.	+	0	ID=cds255;Name=YP_002345355.1;Parent=gene266;Note=member of a type III secretion system which is part of a pathogenicity island in Salmonella%2C Yersinia and pathogenic Escherichia coli;Dbxref=InterPro:IPR006135,InterPro:IPR006307,UniProtKB%2FTrEMBL:Q0WK33,Genbank:YP_002345355.1,GeneID:1173119;gbkey=CDS;product=secretion system apparatus protein SsaU;protein_id=YP_002345355.1;transl_table=11
NC_003143.1	RefSeq	gene	273840	275054	.	+	.	ID=gene267;Name=YPO0274;Dbxref=GeneID:1173120;gbkey=Gene;locus_tag=YPO0274
NC_003143.1	RefSeq	CDS	273840	275054	.	+	0	ID=cds256;Name=YP_002345356.1;Parent=gene267;Dbxref=InterPro:IPR007272,UniProtKB%2FTrEMBL:Q7CKR8,Genbank:YP_002345356.1,GeneID:1173120;gbkey=CDS;product=hypothetical protein;protein_id=YP_002345356.1;transl_table=11
NC_003143.1	RefSeq	gene	275051	275320	.	+	.	ID=gene268;Name=YPO0275;Dbxref=GeneID:1173121;gbkey=Gene;locus_tag=YPO0275
NC_003143.1	RefSeq	CDS	275051	275320	.	+	0	ID=cds257;Name=YP_002345357.1;Parent=gene268;Dbxref=InterPro:IPR001455,UniProtKB%2FTrEMBL:Q7CKR7,Genbank:YP_002345357.1,GeneID:1173121;gbkey=CDS;product=hypothetical protein;protein_id=YP_002345357.1;transl_table=11
NC_003143.1	RefSeq	region	275114	275152	.	+	.	ID=id217;Note=PS01148 Uncharacterized protein family UPF0033 signature.;Dbxref=GeneID:1173121;gbkey=misc_feature
NC_003143.1	RefSeq	gene	275398	276384	.	-	.	ID=gene269;Name=YPO0276;Dbxref=GeneID:1173122;gbkey=Gene;locus_tag=YPO0276
NC_003143.1	RefSeq	CDS	275398	276384	.	-	0	ID=cds258;Name=YP_002345358.1;Parent=gene269;Dbxref=InterPro:IPR000847,InterPro:IPR005119,InterPro:IPR011991,UniProtKB%2FTrEMBL:Q7CKR6,Genbank:YP_002345358.1,GeneID:1173122;gbkey=CDS;product=LysR family transcriptional regulator;protein_id=YP_002345358.1;transl_table=11
NC_003143.1	RefSeq	region	276220	276285	.	-	.	ID=id218;Note=Predicted helix-turn-helix motif with score 1299 %28%2B3.61 SD%29 at aa 34-55%2C sequence NSLSIAAHKLNITPSSTSRSLA;Dbxref=GeneID:1173122;gbkey=misc_feature
NC_003143.1	RefSeq	gene	276551	277837	.	+	.	ID=gene270;Name=YPO0277;Dbxref=GeneID:1173123;gbkey=Gene;locus_tag=YPO0277
NC_003143.1	RefSeq	CDS	276551	277837	.	+	0	ID=cds259;Name=YP_002345359.1;Parent=gene270;Dbxref=UniProtKB%2FTrEMBL:Q7CKR5,Genbank:YP_002345359.1,GeneID:1173123;gbkey=CDS;product=transmembrane transport protein;protein_id=YP_002345359.1;transl_table=11
NC_003143.1	RefSeq	gene	277883	279064	.	+	.	ID=gene271;Name=metC;Dbxref=GeneID:1173124;gbkey=Gene;gene=metC;locus_tag=YPO0278
NC_003143.1	RefSeq	CDS	277883	279064	.	+	0	ID=cds260;Name=YP_002345360.1;Parent=gene271;Dbxref=InterPro:IPR000277,InterPro:IPR006233,UniProtKB%2FTrEMBL:Q7CKR4,Genbank:YP_002345360.1,GeneID:1173124;gbkey=CDS;gene=metC;product=cystathionine beta-lyase;protein_id=YP_002345360.1;transl_table=11
NC_003143.1	RefSeq	region	278480	278524	.	+	.	ID=id219;Note=PS00868 Cys%2FMet metabolism enzymes pyridoxal-phosphate attachment site.;Dbxref=GeneID:1173124;gbkey=misc_feature;gene=metC
NC_003143.1	RefSeq	gene	279205	280005	.	-	.	ID=gene272;Name=hmuV;Dbxref=GeneID:1173125;gbkey=Gene;gene=hmuV;locus_tag=YPO0279
NC_003143.1	RefSeq	CDS	279205	280005	.	-	0	ID=cds261;Name=YP_002345361.1;Parent=gene272;Note=with HmuTU is involved in the transport of hemin;Dbxref=InterPro:IPR003439,InterPro:IPR003593,UniProtKB%2FTrEMBL:Q0WK27,Genbank:YP_002345361.1,GeneID:1173125;gbkey=CDS;gene=hmuV;product=hemin importer ATP-binding subunit;protein_id=YP_002345361.1;transl_table=11
NC_003143.1	RefSeq	region	279538	279582	.	-	.	ID=id220;Note=PS00211 ABC transporters family signature.;Dbxref=GeneID:1173125;gbkey=misc_feature;gene=hmuV
NC_003143.1	RefSeq	region	279853	279876	.	-	.	ID=id221;Note=PS00017 ATP%2FGTP-binding site motif A %28P-loop%29.;Dbxref=GeneID:1173125;gbkey=misc_feature;gene=hmuV
NC_003143.1	RefSeq	gene	279998	281002	.	-	.	ID=gene273;Name=hmuU;Dbxref=GeneID:1173126;gbkey=Gene;gene=hmuU;locus_tag=YPO0280
NC_003143.1	RefSeq	CDS	279998	281002	.	-	0	ID=cds262;Name=YP_002345362.1;Parent=gene273;Dbxref=InterPro:IPR000522,UniProtKB%2FTrEMBL:Q0WK26,Genbank:YP_002345362.1,GeneID:1173126;gbkey=CDS;gene=hmuU;product=hemin transport system permease HmuU;protein_id=YP_002345362.1;transl_table=11
NC_003143.1	RefSeq	gene	280999	281838	.	-	.	ID=gene274;Name=hmuT;Dbxref=GeneID:1173127;gbkey=Gene;gene=hmuT;locus_tag=YPO0281
NC_003143.1	RefSeq	CDS	280999	281838	.	-	0	ID=cds263;Name=YP_002345363.1;Parent=gene274;Dbxref=InterPro:IPR002491,UniProtKB%2FTrEMBL:Q0WK25,Genbank:YP_002345363.1,GeneID:1173127;gbkey=CDS;gene=hmuT;product=hemin-binding protein;protein_id=YP_002345363.1;transl_table=11
NC_003143.1	RefSeq	gene	281835	282872	.	-	.	ID=gene275;Name=hmuS;Dbxref=GeneID:1173128;gbkey=Gene;gene=hmuS;locus_tag=YPO0282
NC_003143.1	RefSeq	CDS	281835	282872	.	-	0	ID=cds264;Name=YP_002345364.1;Parent=gene275;Dbxref=InterPro:IPR007845,UniProtKB%2FTrEMBL:Q0WK24,Genbank:YP_002345364.1,GeneID:1173128;gbkey=CDS;gene=hmuS;product=hemin transport protein;protein_id=YP_002345364.1;transl_table=11
NC_003143.1	RefSeq	gene	282991	285021	.	-	.	ID=gene276;Name=hmuR;Dbxref=GeneID:1173129;gbkey=Gene;gene=hmuR;locus_tag=YPO0283
NC_003143.1	RefSeq	CDS	282991	285021	.	-	0	ID=cds265;Name=YP_002345365.1;Parent=gene276;Dbxref=InterPro:IPR000531,InterPro:IPR010916,InterPro:IPR010917,InterPro:IPR010949,InterPro:IPR011276,InterPro:IPR012910,UniProtKB%2FTrEMBL:Q0WK23,Genbank:YP_002345365.1,GeneID:1173129;gbkey=CDS;gene=hmuR;product=hemin receptor;protein_id=YP_002345365.1;transl_table=11
NC_003143.1	RefSeq	region	284869	285021	.	-	.	ID=id222;Note=PS00430 TonB-dependent receptor proteins signature 1.;Dbxref=GeneID:1173129;gbkey=misc_feature;gene=hmuR
NC_003143.1	RefSeq	gene	285436	286086	.	-	.	ID=gene277;Name=YPO0284;Dbxref=GeneID:1173130;gbkey=Gene;locus_tag=YPO0284
NC_003143.1	RefSeq	CDS	285436	286086	.	-	0	ID=cds266;Name=YP_002345366.1;Parent=gene277;Dbxref=InterPro:IPR008030,UniProtKB%2FTrEMBL:Q56987,Genbank:YP_002345366.1,GeneID:1173130;gbkey=CDS;product=hypothetical protein;protein_id=YP_002345366.1;transl_table=11
NC_003143.1	RefSeq	gene	286120	286665	.	-	.	ID=gene278;Name=YPO0285;Dbxref=GeneID:1173131;gbkey=Gene;locus_tag=YPO0285
NC_003143.1	RefSeq	CDS	286120	286665	.	-	0	ID=cds267;Name=YP_002345367.1;Parent=gene278;Dbxref=InterPro:IPR010413,InterPro:IPR010982,UniProtKB%2FTrEMBL:Q7CKR1,Genbank:YP_002345367.1,GeneID:1173131;gbkey=CDS;product=hypothetical protein;protein_id=YP_002345367.1;transl_table=11
NC_003143.1	RefSeq	gene	286662	287975	.	-	.	ID=gene279;Name=YPO0286;Dbxref=GeneID:1173132;gbkey=Gene;locus_tag=YPO0286
NC_003143.1	RefSeq	CDS	286662	287975	.	-	0	ID=cds268;Name=YP_002345368.1;Parent=gene279;Note=catalyzes the oxygen-independent formation of protoporphyrinogen-IX from coproporphyrinogen-III;Dbxref=InterPro:IPR006638,InterPro:IPR007197,InterPro:IPR010723,UniProtKB%2FTrEMBL:Q7CKR0,Genbank:YP_002345368.1,GeneID:1173132;gbkey=CDS;product=coproporphyrinogen III oxidase;protein_id=YP_002345368.1;transl_table=11
NC_003143.1	RefSeq	gene	288316	289116	.	-	.	ID=gene280;Name=YPO0287;Dbxref=GeneID:1173133;gbkey=Gene;locus_tag=YPO0287
NC_003143.1	RefSeq	CDS	288316	289116	.	-	0	ID=cds269;Name=YP_002345369.1;Parent=gene280;Dbxref=InterPro:IPR003171,UniProtKB%2FTrEMBL:Q7CKQ9,Genbank:YP_002345369.1,GeneID:1173133;gbkey=CDS;product=methylenetetrahydrofolate reductase;protein_id=YP_002345369.1;transl_table=11
NC_003143.1	RefSeq	gene	289431	289919	.	-	.	ID=gene281;Name=YPO0288;Dbxref=GeneID:1173134;gbkey=Gene;locus_tag=YPO0288
NC_003143.1	RefSeq	CDS	289431	289919	.	-	0	ID=cds270;Name=YP_002345370.1;Parent=gene281;Dbxref=InterPro:IPR011233,InterPro:IPR011991,UniProtKB%2FTrEMBL:Q7CKQ8,Genbank:YP_002345370.1,GeneID:1173134;gbkey=CDS;product=hypothetical protein;protein_id=YP_002345370.1;transl_table=11
NC_003143.1	RefSeq	gene	290316	291275	.	-	.	ID=gene282;Name=YPO0289;Dbxref=GeneID:1173135;gbkey=Gene;locus_tag=YPO0289
NC_003143.1	RefSeq	CDS	290316	291275	.	-	0	ID=cds271;Name=YP_002345371.1;Parent=gene282;Dbxref=InterPro:IPR011206,UniProtKB%2FTrEMBL:Q7CKQ7,Genbank:YP_002345371.1,GeneID:1173135;gbkey=CDS;product=ATP%2FGTP-binding protein;protein_id=YP_002345371.1;transl_table=11
NC_003143.1	RefSeq	region	290565	290588	.	-	.	ID=id223;Note=PS00017 ATP%2FGTP-binding site motif A %28P-loop%29.;Dbxref=GeneID:1173135;gbkey=misc_feature
NC_003143.1	RefSeq	gene	291275	292354	.	-	.	ID=gene283;Name=YPO0290;Dbxref=GeneID:1173136;gbkey=Gene;locus_tag=YPO0290
NC_003143.1	RefSeq	CDS	291275	292354	.	-	0	ID=cds272;Name=YP_002345372.1;Parent=gene283;Dbxref=InterPro:IPR011215,UniProtKB%2FTrEMBL:Q7CKQ6,Genbank:YP_002345372.1,GeneID:1173136;gbkey=CDS;product=hypothetical protein;protein_id=YP_002345372.1;transl_table=11
NC_003143.1	RefSeq	gene	292347	293159	.	-	.	ID=gene284;Name=YPO0291;Dbxref=GeneID:1173137;gbkey=Gene;locus_tag=YPO0291
NC_003143.1	RefSeq	CDS	292347	293159	.	-	0	ID=cds273;Name=YP_002345373.1;Parent=gene284;Dbxref=InterPro:IPR011232,UniProtKB%2FTrEMBL:Q0WK15,Genbank:YP_002345373.1,GeneID:1173137;gbkey=CDS;product=hypothetical protein;protein_id=YP_002345373.1;transl_table=11
NC_003143.1	RefSeq	gene	293152	294288	.	-	.	ID=gene285;Name=YPO0292;Dbxref=GeneID:1173138;gbkey=Gene;locus_tag=YPO0292
NC_003143.1	RefSeq	CDS	293152	294288	.	-	0	ID=cds274;Name=YP_002345374.1;Parent=gene285;Dbxref=InterPro:IPR011214,UniProtKB%2FTrEMBL:Q7CKQ5,Genbank:YP_002345374.1,GeneID:1173138;gbkey=CDS;product=hypothetical protein;protein_id=YP_002345374.1;transl_table=11
NC_003143.1	RefSeq	gene	294300	295361	.	-	.	ID=gene286;Name=YPO0293;Dbxref=GeneID:1173139;gbkey=Gene;locus_tag=YPO0293
NC_003143.1	RefSeq	CDS	294300	295361	.	-	0	ID=cds275;Name=YP_002345375.1;Parent=gene286;Dbxref=InterPro:IPR011226,InterPro:IPR011761,InterPro:IPR013816,UniProtKB%2FTrEMBL:Q7CKQ4,Genbank:YP_002345375.1,GeneID:1173139;gbkey=CDS;product=hypothetical protein;protein_id=YP_002345375.1;transl_table=11
NC_003143.1	RefSeq	gene	295637	296230	.	+	.	ID=gene287;Name=terZ;Dbxref=GeneID:1173140;gbkey=Gene;gene=terZ;locus_tag=YPO0294
NC_003143.1	RefSeq	CDS	295637	296230	.	+	0	ID=cds276;Name=YP_002345376.1;Parent=gene287;Dbxref=InterPro:IPR003325,UniProtKB%2FTrEMBL:Q0WK12,Genbank:YP_002345376.1,GeneID:1173140;gbkey=CDS;gene=terZ;product=tellurium resistance protein;protein_id=YP_002345376.1;transl_table=11
NC_003143.1	RefSeq	gene	296230	297414	.	+	.	ID=gene288;Name=terA;Dbxref=GeneID:1173141;gbkey=Gene;gene=terA;locus_tag=YPO0295
NC_003143.1	RefSeq	CDS	296230	297414	.	+	0	ID=cds277;Name=YP_002345377.2;Parent=gene288;Dbxref=InterPro:IPR003325,UniProtKB%2FTrEMBL:Q0WK11,Genbank:YP_002345377.2,GeneID:1173141;gbkey=CDS;gene=terA;product=tellurite resistance protein;protein_id=YP_002345377.2;transl_table=11
NC_003143.1	RefSeq	gene	297447	297902	.	+	.	ID=gene289;Name=terB;Dbxref=GeneID:1173142;gbkey=Gene;gene=terB;locus_tag=YPO0296
NC_003143.1	RefSeq	CDS	297447	297902	.	+	0	ID=cds278;Name=YP_002345378.1;Parent=gene289;Dbxref=InterPro:IPR007791,UniProtKB%2FTrEMBL:Q7CKQ3,Genbank:YP_002345378.1,GeneID:1173142;gbkey=CDS;gene=terB;product=tellurite resistance protein;protein_id=YP_002345378.1;transl_table=11
NC_003143.1	RefSeq	gene	297924	298961	.	+	.	ID=gene290;Name=terC;Dbxref=GeneID:1173143;gbkey=Gene;gene=terC;locus_tag=YPO0297
NC_003143.1	RefSeq	CDS	297924	298961	.	+	0	ID=cds279;Name=YP_002345379.1;Parent=gene290;Dbxref=InterPro:IPR005496,UniProtKB%2FTrEMBL:Q74XG9,Genbank:YP_002345379.1,GeneID:1173143;gbkey=CDS;gene=terC;product=tellurium resistance protein;protein_id=YP_002345379.1;transl_table=11
NC_003143.1	RefSeq	gene	299025	299603	.	+	.	ID=gene291;Name=terD;Dbxref=GeneID:1173144;gbkey=Gene;gene=terD;locus_tag=YPO0298
NC_003143.1	RefSeq	CDS	299025	299603	.	+	0	ID=cds280;Name=YP_002345380.1;Parent=gene291;Dbxref=InterPro:IPR003325,UniProtKB%2FTrEMBL:Q0WK08,Genbank:YP_002345380.1,GeneID:1173144;gbkey=CDS;gene=terD;product=tellurium resistance protein;protein_id=YP_002345380.1;transl_table=11
NC_003143.1	RefSeq	gene	299787	300362	.	+	.	ID=gene292;Name=terE;Dbxref=GeneID:1173145;gbkey=Gene;gene=terE;locus_tag=YPO0299
NC_003143.1	RefSeq	CDS	299787	300362	.	+	0	ID=cds281;Name=YP_002345381.1;Parent=gene292;Dbxref=InterPro:IPR003325,UniProtKB%2FTrEMBL:Q7CKQ2,Genbank:YP_002345381.1,GeneID:1173145;gbkey=CDS;gene=terE;product=tellurium resistance protein;protein_id=YP_002345381.1;transl_table=11
NC_003143.1	RefSeq	repeat_region	300409	301120	.	+	.	ID=id224;Note=Contains a %27G%27 at nucleotide position 315%7EIS200-like insertion sequence:IS1541;gbkey=repeat_region
NC_003143.1	RefSeq	gene	300554	301012	.	+	.	ID=gene293;Name=tnp;Dbxref=GeneID:1173146;gbkey=Gene;gene=tnp;locus_tag=YPO0300
NC_003143.1	RefSeq	CDS	300554	301012	.	+	0	ID=cds282;Name=YP_002345382.1;Parent=gene293;Dbxref=InterPro:IPR002686,UniProtKB%2FTrEMBL:Q74YM6,Genbank:YP_002345382.1,GeneID:1173146;gbkey=CDS;gene=tnp;product=transposase for the IS1541 insertion element;protein_id=YP_002345382.1;transl_table=11
NC_003143.1	RefSeq	gene	301786	302424	.	+	.	ID=gene294;Name=YPO0301;Dbxref=GeneID:1173147;gbkey=Gene;locus_tag=YPO0301
NC_003143.1	RefSeq	CDS	301786	302424	.	+	0	ID=cds283;Name=YP_002345383.1;Parent=gene294;Dbxref=InterPro:IPR010546,UniProtKB%2FTrEMBL:Q7CKQ1,Genbank:YP_002345383.1,GeneID:1173147;gbkey=CDS;product=hypothetical protein;protein_id=YP_002345383.1;transl_table=11
NC_003143.1	RefSeq	gene	302675	305053	.	+	.	ID=gene295;Name=YPO0302;Dbxref=GeneID:1173148;gbkey=Gene;locus_tag=YPO0302
NC_003143.1	RefSeq	CDS	302675	305053	.	+	0	ID=cds284;Name=YP_002345384.1;Parent=gene295;Dbxref=InterPro:IPR000015,InterPro:IPR002198,UniProtKB%2FTrEMBL:Q7CKQ0,Genbank:YP_002345384.1,GeneID:1173148;gbkey=CDS;product=outer membrane fimbrial usher protein;protein_id=YP_002345384.1;transl_table=11
NC_003143.1	RefSeq	region	303524	303556	.	+	.	ID=id225;Note=PS01151 Fimbrial biogenesis outer membrane usher protein signature.;Dbxref=GeneID:1173148;gbkey=misc_feature
NC_003143.1	RefSeq	gene	305125	305868	.	+	.	ID=gene296;Name=YPO0303;Dbxref=GeneID:1173149;gbkey=Gene;locus_tag=YPO0303
NC_003143.1	RefSeq	CDS	305125	305868	.	+	0	ID=cds285;Name=YP_002345385.1;Parent=gene296;Note=member of the periplasmic pilus chaperone family of proteins;Dbxref=InterPro:IPR001829,InterPro:IPR008962,UniProtKB%2FTrEMBL:Q7CKP9,Genbank:YP_002345385.1,GeneID:1173149;gbkey=CDS;product=periplasmic chaperone protein;protein_id=YP_002345385.1;transl_table=11
NC_003143.1	RefSeq	region	305194	305262	.	+	.	ID=id226;Note=1 probable transmembrane helix predicted;Dbxref=GeneID:1173149;gbkey=misc_feature
NC_003143.1	RefSeq	gene	305876	306133	.	+	.	ID=gene297;Name=YPO0304;Dbxref=GeneID:1173150;gbkey=Gene;locus_tag=YPO0304
NC_003143.1	RefSeq	CDS	305876	306133	.	+	0	ID=cds286;Name=YP_002345386.1;Parent=gene297;Note=No significant database hits;Dbxref=UniProtKB%2FTrEMBL:Q7CKP8,Genbank:YP_002345386.1,GeneID:1173150;gbkey=CDS;product=hypothetical protein;protein_id=YP_002345386.1;transl_table=11
NC_003143.1	RefSeq	gene	307245	308645	.	+	.	ID=gene298;Name=YPO0306;Dbxref=GeneID:1173151;gbkey=Gene;locus_tag=YPO0306
NC_003143.1	RefSeq	CDS	307245	308645	.	+	0	ID=cds287;Name=YP_002345387.1;Parent=gene298;Note=No significant database hits;Dbxref=InterPro:IPR007087,UniProtKB%2FTrEMBL:Q7CKP7,Genbank:YP_002345387.1,GeneID:1173151;gbkey=CDS;product=hypothetical protein;protein_id=YP_002345387.1;transl_table=11
NC_003143.1	RefSeq	gene	309654	311711	.	+	.	ID=gene299;Name=YPO0308;Dbxref=GeneID:1173153;gbkey=Gene;locus_tag=YPO0308
NC_003143.1	RefSeq	CDS	309654	311711	.	+	0	ID=cds288;Name=YP_002345389.1;Parent=gene299;Dbxref=InterPro:IPR003610,InterPro:IPR003961,InterPro:IPR006094,InterPro:IPR008957,InterPro:IPR012951,UniProtKB%2FTrEMBL:Q7CKP6,Genbank:YP_002345389.1,GeneID:1173153;gbkey=CDS;product=oxidoreductase;protein_id=YP_002345389.1;transl_table=11
NC_003143.1	RefSeq	gene	312055	315771	.	-	.	ID=gene300;Name=YPO0309;Dbxref=GeneID:1173154;gbkey=Gene;locus_tag=YPO0309
NC_003143.1	RefSeq	CDS	312055	315771	.	-	0	ID=cds289;Name=YP_002345390.1;Parent=gene300;Dbxref=InterPro:IPR005546,InterPro:IPR006315,InterPro:IPR011050,UniProtKB%2FTrEMBL:Q0WJZ8,Genbank:YP_002345390.1,GeneID:1173154;gbkey=CDS;product=hypothetical protein;protein_id=YP_002345390.1;transl_table=11
NC_003143.1	RefSeq	gene	316696	317220	.	+	.	ID=gene301;Name=ubiC;Dbxref=GeneID:1173155;gbkey=Gene;gene=ubiC;locus_tag=YPO0310
NC_003143.1	RefSeq	CDS	316696	317220	.	+	0	ID=cds290;Name=YP_002345391.1;Parent=gene301;Note=catalyzes the formation of 4-hydroxybenzoate from chorismate;Dbxref=InterPro:IPR007440,UniProtKB%2FTrEMBL:Q0WJZ7,Genbank:YP_002345391.1,GeneID:1173155;gbkey=CDS;gene=ubiC;product=chorismate pyruvate lyase;protein_id=YP_002345391.1;transl_table=11
NC_003143.1	RefSeq	gene	317386	318252	.	+	.	ID=gene302;Name=ubiA;Dbxref=GeneID:1173156;gbkey=Gene;gene=ubiA;gene_synonym=cyr,ubiA;locus_tag=YPO0311
NC_003143.1	RefSeq	CDS	317386	318252	.	+	0	ID=cds291;Name=YP_002345392.1;Parent=gene302;Note=catalyzes the conversion of 4-Hydroxybenzoate into 3-octaprenyl-4-hydroxybenzoate%2C as part of the ubiquinone biosynthesis pathway;Dbxref=UniProtKB%2FTrEMBL:Q7CKP5,Genbank:YP_002345392.1,GeneID:1173156;gbkey=CDS;gene=ubiA;product=4-hydroxybenzoate octaprenyltransferase;protein_id=YP_002345392.1;transl_table=11
NC_003143.1	RefSeq	region	317584	317652	.	+	.	ID=id227;Note=PS00943 UbiA prenyltransferase family signature.;Dbxref=GeneID:1173156;gbkey=misc_feature;gene=ubiA
NC_003143.1	RefSeq	gene	318433	320910	.	-	.	ID=gene303;Name=plsB;Dbxref=GeneID:1173157;gbkey=Gene;gene=plsB;locus_tag=YPO0312
NC_003143.1	RefSeq	CDS	318433	320910	.	-	0	ID=cds292;Name=YP_002345393.1;Parent=gene303;Note=PlsB%3B catalyzes the formation of 1-acyl-sn-glycerol 3-phosphate by transfering the acyl moiety from acyl-CoA;Dbxref=InterPro:IPR002123,InterPro:IPR012082,InterPro:IPR012124,UniProtKB%2FTrEMBL:Q0WJZ5,Genbank:YP_002345393.1,GeneID:1173157;gbkey=CDS;gene=plsB;product=glycerol-3-phosphate acyltransferase;protein_id=YP_002345393.1;transl_table=11
NC_003143.1	RefSeq	gene	321038	321409	.	+	.	ID=gene304;Name=dgkA;Dbxref=GeneID:1173158;gbkey=Gene;gene=dgkA;gene_synonym=dgkA;locus_tag=YPO0313
NC_003143.1	RefSeq	CDS	321038	321409	.	+	0	ID=cds293;Name=YP_002345394.1;Parent=gene304;Dbxref=InterPro:IPR000829,UniProtKB%2FTrEMBL:Q7CKP4,Genbank:YP_002345394.1,GeneID:1173158;gbkey=CDS;gene=dgkA;product=diacylglycerol kinase;protein_id=YP_002345394.1;transl_table=11
NC_003143.1	RefSeq	region	321245	321280	.	+	.	ID=id228;Note=PS01069 Prokaryotic diacylglycerol kinase signature.;Dbxref=GeneID:1173158;gbkey=misc_feature;gene=dgkA
NC_003143.1	RefSeq	gene	321534	322142	.	+	.	ID=gene305;Name=lexA;Dbxref=GeneID:1173159;gbkey=Gene;gene=lexA;gene_synonym=exrA,lexA,spr,tsl,umuA;locus_tag=YPO0314
NC_003143.1	RefSeq	CDS	321534	322142	.	+	0	ID=cds294;Name=YP_002345395.1;Parent=gene305;Note=Represses a number of genes involved in the response to DNA damage;Dbxref=InterPro:IPR006197,InterPro:IPR006198,InterPro:IPR006199,InterPro:IPR006200,InterPro:IPR011056,InterPro:IPR011991,UniProtKB%2FTrEMBL:Q0WJZ3,Genbank:YP_002345395.1,GeneID:1173159;gbkey=CDS;gene=lexA;product=LexA repressor;protein_id=YP_002345395.1;transl_table=11
NC_003143.1	RefSeq	repeat_region	322219	322253	.	+	.	ID=id229;Note=contains 5x TTTTTGC repeats;gbkey=repeat_region
NC_003143.1	RefSeq	gene	322302	322811	.	-	.	ID=gene306;Name=YPO0315;Dbxref=GeneID:1173160;gbkey=Gene;locus_tag=YPO0315
NC_003143.1	RefSeq	CDS	322302	322811	.	-	0	ID=cds295;Name=YP_002345396.1;Parent=gene306;Note=Acts as a negative controlling element%2C employing Zn%282%2B%29 as a cofactor to bind the operator of the repressed genes znuACB;Dbxref=InterPro:IPR002481,InterPro:IPR011991,UniProtKB%2FTrEMBL:Q0WJZ2,Genbank:YP_002345396.1,GeneID:1173160;gbkey=CDS;product=zinc uptake transcriptional repressor;protein_id=YP_002345396.1;transl_table=11
NC_003143.1	RefSeq	gene	323066	324103	.	+	.	ID=gene307;Name=YPO0316;Dbxref=GeneID:1173161;gbkey=Gene;locus_tag=YPO0316
NC_003143.1	RefSeq	CDS	323066	324103	.	+	0	ID=cds296;Name=YP_002345397.1;Parent=gene307;Dbxref=InterPro:IPR001269,InterPro:IPR004653,UniProtKB%2FTrEMBL:Q0WJZ1,Genbank:YP_002345397.1,GeneID:1173161;gbkey=CDS;product=tRNA-dihydrouridine synthase A;protein_id=YP_002345397.1;transl_table=11
NC_003143.1	RefSeq	region	323369	323425	.	+	.	ID=id230;Note=PS01136 Uncharacterized protein family UPF0034 signature.;Dbxref=GeneID:1173161;gbkey=misc_feature
NC_003143.1	RefSeq	gene	324619	324837	.	+	.	ID=gene308;Name=pspG;Dbxref=GeneID:1173162;gbkey=Gene;gene=pspG;locus_tag=YPO0318
NC_003143.1	RefSeq	CDS	324619	324837	.	+	0	ID=cds297;Name=YP_002345398.1;Parent=gene308;Note=coordinately regulated along with pspA%3B PspF-dependent induction in response to secretin overexpression in Yersinia;Dbxref=UniProtKB%2FTrEMBL:Q7CKP3,Genbank:YP_002345398.1,GeneID:1173162;gbkey=CDS;gene=pspG;product=phage shock protein G;protein_id=YP_002345398.1;transl_table=11
NC_003143.1	RefSeq	gene	325182	326165	.	-	.	ID=gene309;Name=qor;Dbxref=GeneID:1173163;gbkey=Gene;gene=qor;gene_synonym=hcz,qor;locus_tag=YPO0319
NC_003143.1	RefSeq	CDS	325182	326165	.	-	0	ID=cds298;Name=YP_002345399.1;Parent=gene309;Dbxref=InterPro:IPR002085,InterPro:IPR002364,InterPro:IPR011032,InterPro:IPR013149,InterPro:IPR013154,UniProtKB%2FTrEMBL:Q0WJY9,Genbank:YP_002345399.1,GeneID:1173163;gbkey=CDS;gene=qor;product=quinone oxidoreductase%2C NADPH-dependent;protein_id=YP_002345399.1;transl_table=11
NC_003143.1	RefSeq	region	325680	325745	.	-	.	ID=id231;Note=PS01162 Quinone oxidoreductase %2F zeta-crystallin signature.;Dbxref=GeneID:1173163;gbkey=misc_feature;gene=qor
NC_003143.1	RefSeq	region	325692	325724	.	-	.	ID=id232;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site.;Dbxref=GeneID:1173163;gbkey=misc_feature;gene=qor
NC_003143.1	RefSeq	gene	326497	327903	.	+	.	ID=gene310;Name=dnaB;Dbxref=GeneID:1173164;gbkey=Gene;gene=dnaB;gene_synonym=groP,grpA;locus_tag=YPO0320
NC_003143.1	RefSeq	CDS	326497	327903	.	+	0	ID=cds299;Name=YP_002345400.1;Parent=gene310;Note=unwinds double stranded DNA;Dbxref=InterPro:IPR003593,InterPro:IPR007692,InterPro:IPR007693,InterPro:IPR007694,UniProtKB%2FTrEMBL:Q7CKP2,Genbank:YP_002345400.1,GeneID:1173164;gbkey=CDS;gene=dnaB;product=replicative DNA helicase;protein_id=YP_002345400.1;transl_table=11
NC_003143.1	RefSeq	region	327178	327201	.	+	.	ID=id233;Note=PS00017 ATP%2FGTP-binding site motif A %28P-loop%29.;Dbxref=GeneID:1173164;gbkey=misc_feature;gene=dnaB
NC_003143.1	RefSeq	region	327583	327648	.	+	.	ID=id234;Note=Predicted helix-turn-helix motif with score 1279 %28%2B3.54 SD%29 at aa 363-384%2C sequence RSLKALAKELQVPVVALSQLNR;Dbxref=GeneID:1173164;gbkey=misc_feature;gene=dnaB
NC_003143.1	RefSeq	gene	328000	329079	.	+	.	ID=gene311;Name=alr;Dbxref=GeneID:1173165;gbkey=Gene;gene=alr;locus_tag=YPO0321
NC_003143.1	RefSeq	CDS	328000	329079	.	+	0	ID=cds300;Name=YP_002345401.1;Parent=gene311;Note=converts L-alanine to D-alanine which is used in cell wall biosynthesis%3B binds one pyridoxal phosphate per monomer%3B forms a homodimer;Dbxref=InterPro:IPR000821,InterPro:IPR001608,InterPro:IPR009006,InterPro:IPR011079,InterPro:IPR012155,UniProtKB%2FTrEMBL:Q0WJY7,Genbank:YP_002345401.1,GeneID:1173165;gbkey=CDS;gene=alr;product=alanine racemase;protein_id=YP_002345401.1;transl_table=11
NC_003143.1	RefSeq	region	328090	328122	.	+	.	ID=id235;Note=PS00395 Alanine racemase pyridoxal-phosphate attachment site.;Dbxref=GeneID:1173165;gbkey=misc_feature;gene=alr
NC_003143.1	RefSeq	gene	329265	330458	.	+	.	ID=gene312;Name=tyrB;Dbxref=GeneID:1173166;gbkey=Gene;gene=tyrB;locus_tag=YPO0322
NC_003143.1	RefSeq	CDS	329265	330458	.	+	0	ID=cds301;Name=YP_002345402.1;Parent=gene312;Note=catalyzes the formation of L-glutamate and an aromatic oxo acid from an aromatic amino acid and 2-oxoglutarate;Dbxref=InterPro:IPR000796,InterPro:IPR004838,InterPro:IPR004839,UniProtKB%2FTrEMBL:Q7CKP1,Genbank:YP_002345402.1,GeneID:1173166;gbkey=CDS;gene=tyrB;product=aromatic amino acid aminotransferase;protein_id=YP_002345402.1;transl_table=11
NC_003143.1	RefSeq	region	329994	330035	.	+	.	ID=id236;Note=PS00105 Aminotransferases class-I pyridoxal-phosphate attachment site.;Dbxref=GeneID:1173166;gbkey=misc_feature;gene=tyrB
NC_003143.1	RefSeq	gene	330985	331344	.	+	.	ID=gene313;Name=YPO0323;Dbxref=GeneID:1173167;gbkey=Gene;locus_tag=YPO0323
NC_003143.1	RefSeq	CDS	330985	331344	.	+	0	ID=cds302;Name=YP_002345403.1;Parent=gene313;Dbxref=InterPro:IPR007351,UniProtKB%2FTrEMBL:Q74XF0,Genbank:YP_002345403.1,GeneID:1173167;gbkey=CDS;product=hypothetical protein;protein_id=YP_002345403.1;transl_table=11
NC_003143.1	RefSeq	gene	331437	334280	.	-	.	ID=gene314;Name=uvrA;Dbxref=GeneID:1173168;gbkey=Gene;gene=uvrA;gene_synonym=dinE,uvrA;locus_tag=YPO0324
NC_003143.1	RefSeq	CDS	331437	334280	.	-	0	ID=cds303;Name=YP_002345404.1;Parent=gene314;Note=The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 uvrA and 2 uvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by uvrB%2C the uvrA molecules dissociate;Dbxref=InterPro:IPR003439,InterPro:IPR004602,UniProtKB%2FTrEMBL:Q0WJY4,Genbank:YP_002345404.1,GeneID:1173168;gbkey=CDS;gene=uvrA;product=excinuclease ABC subunit A;protein_id=YP_002345404.1;transl_table=11
NC_003143.1	RefSeq	region	331749	331793	.	-	.	ID=id237;Note=PS00211 ABC transporters family signature.;Dbxref=GeneID:1173168;gbkey=misc_feature;gene=uvrA
NC_003143.1	RefSeq	region	332340	332363	.	-	.	ID=id238;Note=PS00017 ATP%2FGTP-binding site motif A %28P-loop%29.;Dbxref=GeneID:1173168;gbkey=misc_feature;gene=uvrA
NC_003143.1	RefSeq	region	332778	332822	.	-	.	ID=id239;Note=PS00211 ABC transporters family signature.;Dbxref=GeneID:1173168;gbkey=misc_feature;gene=uvrA
NC_003143.1	RefSeq	region	334167	334190	.	-	.	ID=id240;Note=PS00017 ATP%2FGTP-binding site motif A %28P-loop%29.;Dbxref=GeneID:1173168;gbkey=misc_feature;gene=uvrA
NC_003143.1	RefSeq	gene	334738	335286	.	+	.	ID=gene315;Name=ssb;Dbxref=GeneID:1173169;gbkey=Gene;gene=ssb;gene_synonym=lexC,ssb;locus_tag=YPO0325
NC_003143.1	RefSeq	CDS	334738	335286	.	+	0	ID=cds304;Name=YP_002345405.1;Parent=gene315;Note=binds to single stranded DNA and PriA helcase facilitate replication restart;Dbxref=InterPro:IPR000424,InterPro:IPR008994,InterPro:IPR010913,InterPro:IPR011344,InterPro:IPR012340,UniProtKB%2FTrEMBL:Q0WJY3,Genbank:YP_002345405.1,GeneID:1173169;gbkey=CDS;gene=ssb;product=single-stranded DNA-binding protein;protein_id=YP_002345405.1;transl_table=11
NC_003143.1	RefSeq	region	334753	334791	.	+	.	ID=id241;Note=PS00735 Single-strand binding protein family signature 1.;Dbxref=GeneID:1173169;gbkey=misc_feature;gene=ssb
NC_003143.1	RefSeq	region	334894	334923	.	+	.	ID=id242;Note=PS00736 Single-strand binding protein family signature 2.;Dbxref=GeneID:1173169;gbkey=misc_feature;gene=ssb
NC_003143.1	RefSeq	gene	335533	335847	.	-	.	ID=gene316;Name=YPO0326;Dbxref=GeneID:1173170;gbkey=Gene;locus_tag=YPO0326
NC_003143.1	RefSeq	CDS	335533	335847	.	-	0	ID=cds305;Name=YP_002345406.1;Parent=gene316;Dbxref=InterPro:IPR008000,InterPro:IPR013448,UniProtKB%2FTrEMBL:Q0WJY2,Genbank:YP_002345406.1,GeneID:1173170;gbkey=CDS;product=hypothetical protein;protein_id=YP_002345406.1;transl_table=11
NC_003143.1	RefSeq	gene	335861	337009	.	-	.	ID=gene317;Name=YPO0327;Dbxref=GeneID:1173171;gbkey=Gene;locus_tag=YPO0327
NC_003143.1	RefSeq	CDS	335861	337009	.	-	0	ID=cds306;Name=YP_002345407.1;Parent=gene317;Dbxref=InterPro:IPR001670,InterPro:IPR013460,UniProtKB%2FTrEMBL:Q7CKP0,Genbank:YP_002345407.1,GeneID:1173171;gbkey=CDS;product=alcohol dehydrogenase;protein_id=YP_002345407.1;transl_table=11
NC_003143.1	RefSeq	region	336173	336235	.	-	.	ID=id243;Note=PS00060 Iron-containing alcohol dehydrogenases signature 2.;Dbxref=GeneID:1173171;gbkey=misc_feature
NC_003143.1	RefSeq	region	336410	336496	.	-	.	ID=id244;Note=PS00913 Iron-containing alcohol dehydrogenases signature 1.;Dbxref=GeneID:1173171;gbkey=misc_feature
NC_003143.1	RefSeq	gene	337076	337900	.	-	.	ID=gene318;Name=rhaD;Dbxref=GeneID:1173172;gbkey=Gene;gene=rhaD;locus_tag=YPO0328
NC_003143.1	RefSeq	CDS	337076	337900	.	-	0	ID=cds307;Name=YP_002345408.1;Parent=gene318;Dbxref=InterPro:IPR001303,InterPro:IPR013447,UniProtKB%2FTrEMBL:Q0WJY0,Genbank:YP_002345408.1,GeneID:1173172;gbkey=CDS;gene=rhaD;product=rhamnulose-1-phosphate aldolase;protein_id=YP_002345408.1;transl_table=11
NC_003143.1	RefSeq	gene	337913	339169	.	-	.	ID=gene319;Name=rhaA;Dbxref=GeneID:1173173;gbkey=Gene;gene=rhaA;locus_tag=YPO0329
NC_003143.1	RefSeq	CDS	337913	339169	.	-	0	ID=cds308;Name=YP_002345409.1;Parent=gene319;Note=catalyzes the formation of L-rhamnulose from L-rhamnose;Dbxref=InterPro:IPR009308,UniProtKB%2FTrEMBL:Q0WJX9,Genbank:YP_002345409.1,GeneID:1173173;gbkey=CDS;gene=rhaA;product=L-rhamnose isomerase;protein_id=YP_002345409.1;transl_table=11
NC_003143.1	RefSeq	gene	339166	340623	.	-	.	ID=gene320;Name=rhaB;Dbxref=GeneID:1173174;gbkey=Gene;gene=rhaB;locus_tag=YPO0330
NC_003143.1	RefSeq	CDS	339166	340623	.	-	0	ID=cds309;Name=YP_002345410.1;Parent=gene320;Note=catalyzes the ATP-dependent phosphorylation of rhamnulose;Dbxref=InterPro:IPR000577,InterPro:IPR013449,UniProtKB%2FTrEMBL:Q0WJX8,Genbank:YP_002345410.1,GeneID:1173174;gbkey=CDS;gene=rhaB;product=rhamnulokinase;protein_id=YP_002345410.1;transl_table=11
NC_003143.1	RefSeq	gene	340646	340828	.	+	.	ID=gene321;Name=YPO0331;Dbxref=GeneID:1173175;gbkey=Gene;locus_tag=YPO0331
NC_003143.1	RefSeq	CDS	340646	340828	.	+	0	ID=cds310;Name=YP_002345411.1;Parent=gene321;Note=No significant database hits;Dbxref=UniProtKB%2FTrEMBL:Q0WJX7,Genbank:YP_002345411.1,GeneID:1173175;gbkey=CDS;product=hypothetical protein;protein_id=YP_002345411.1;transl_table=11
NC_003143.1	RefSeq	gene	341050	341871	.	+	.	ID=gene322;Name=rhaS;Dbxref=GeneID:1173176;gbkey=Gene;gene=rhaS;gene_synonym=rhaC2,rhaS;locus_tag=YPO0332
NC_003143.1	RefSeq	CDS	341050	341871	.	+	0	ID=cds311;Name=YP_002345412.1;Parent=gene322;Note=activates the expression of the rhaBAD operon and rhaT gene;Dbxref=InterPro:IPR000005,InterPro:IPR003313,InterPro:IPR009057,InterPro:IPR011051,InterPro:IPR012287,UniProtKB%2FTrEMBL:Q0WJX6,Genbank:YP_002345412.1,GeneID:1173176;gbkey=CDS;gene=rhaS;product=transcriptional activator RhaS;protein_id=YP_002345412.1;transl_table=11
NC_003143.1	RefSeq	region	341611	341676	.	+	.	ID=id245;Note=Predicted helix-turn-helix motif with score 1051 %28%2B2.77 SD%29 at aa 196-217%2C sequence VEWPELADRFALPLRTLHRQLK;Dbxref=GeneID:1173176;gbkey=misc_feature;gene=rhaS
NC_003143.1	RefSeq	gene	342004	342876	.	+	.	ID=gene323;Name=rhaR;Dbxref=GeneID:1173177;gbkey=Gene;gene=rhaR;gene_synonym=rhaC1,rhaR;locus_tag=YPO0333
NC_003143.1	RefSeq	CDS	342004	342876	.	+	0	ID=cds312;Name=YP_002345413.1;Parent=gene323;Note=activates the expression of rhaRS in response to L-rhamnose;Dbxref=InterPro:IPR000005,InterPro:IPR003313,InterPro:IPR009057,InterPro:IPR011051,InterPro:IPR012287,UniProtKB%2FTrEMBL:Q0WJX5,Genbank:YP_002345413.1,GeneID:1173177;gbkey=CDS;gene=rhaR;product=transcriptional activator RhaR;protein_id=YP_002345413.1;transl_table=11
NC_003143.1	RefSeq	region	342688	342816	.	+	.	ID=id246;Note=PS00041 Bacterial regulatory proteins%2C araC family signature.;Dbxref=GeneID:1173177;gbkey=misc_feature;gene=rhaR
NC_003143.1	RefSeq	gene	343025	344059	.	-	.	ID=gene324;Name=rhaT;Dbxref=GeneID:1173178;gbkey=Gene;gene=rhaT;locus_tag=YPO0334
NC_003143.1	RefSeq	CDS	343025	344059	.	-	0	ID=cds313;Name=YP_002345414.1;Parent=gene324;Note=transports L-rhamnose and L-lyxose into the cell;Dbxref=InterPro:IPR004673,InterPro:IPR010476,UniProtKB%2FTrEMBL:Q0WJX4,Genbank:YP_002345414.1,GeneID:1173178;gbkey=CDS;gene=rhaT;product=rhamnose-proton symporter;protein_id=YP_002345414.1;transl_table=11
NC_003143.1	RefSeq	region	343997	344029	.	-	.	ID=id247;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site.;Dbxref=GeneID:1173178;gbkey=misc_feature;gene=rhaT
NC_003143.1	RefSeq	region	344098	348755	.	-	.	ID=id248;Note=Region which exhibits many of the characteristics of a pathogenicity island: low G%2BC %2837%25%29%2C next to tRNA Phe%2Ccontains transposase remnants and other pseudogenes and contains a viral enhancing protein %28YPO0339%29 important for the invasion of the cells of the insect midgut.;gbkey=misc_feature
NC_003143.1	RefSeq	gene	344915	345340	.	-	.	ID=gene325;Name=YPO0337;Dbxref=GeneID:1173181;gbkey=Gene;locus_tag=YPO0337
NC_003143.1	RefSeq	CDS	344915	345340	.	-	0	ID=cds314;Name=YP_002345416.1;Parent=gene325;Note=No significant database hits;Dbxref=InterPro:IPR008992,UniProtKB%2FTrEMBL:Q7CKN4,Genbank:YP_002345416.1,GeneID:1173181;gbkey=CDS;product=hypothetical protein;protein_id=YP_002345416.1;transl_table=11
NC_003143.1	RefSeq	gene	345570	345737	.	+	.	ID=gene326;Name=YPO0338;Dbxref=GeneID:1173182;gbkey=Gene;locus_tag=YPO0338
NC_003143.1	RefSeq	CDS	345570	345737	.	+	0	ID=cds315;Name=YP_002345417.1;Parent=gene326;Note=No significant database hits;Dbxref=UniProtKB%2FTrEMBL:Q74XE0,Genbank:YP_002345417.1,GeneID:1173182;gbkey=CDS;product=hypothetical protein;protein_id=YP_002345417.1;transl_table=11
NC_003143.1	RefSeq	gene	345752	348322	.	+	.	ID=gene327;Name=YPO0339;Dbxref=GeneID:1173183;gbkey=Gene;locus_tag=YPO0339
NC_003143.1	RefSeq	CDS	345752	348322	.	+	0	ID=cds316;Name=YP_002345418.1;Parent=gene327;Dbxref=InterPro:IPR004954,UniProtKB%2FTrEMBL:Q7CKN3,Genbank:YP_002345418.1,GeneID:1173183;gbkey=CDS;product=enhancing factor;protein_id=YP_002345418.1;transl_table=11
NC_003143.1	RefSeq	region	346490	346519	.	+	.	ID=id249;Note=PS00142 Neutral zinc metallopeptidases%2C zinc-binding region signature.;Dbxref=GeneID:1173183;gbkey=misc_feature
NC_003143.1	RefSeq	gene	348756	348831	.	-	.	ID=gene328;Name=YPt_02;Dbxref=GeneID:1173185;gbkey=Gene;locus_tag=YPt_02
NC_003143.1	RefSeq	tRNA	348756	348831	.	-	.	ID=rna5;Parent=gene328;Note=tRNA Phe anticodon GAA%2C Cove score 84.11;Dbxref=GeneID:1173185;gbkey=tRNA;product=tRNA-Phe
NC_003143.1	RefSeq	exon	348756	348831	.	-	.	ID=id250;Parent=rna5;Note=tRNA Phe anticodon GAA%2C Cove score 84.11;Dbxref=GeneID:1173185;gbkey=tRNA;product=tRNA-Phe
NC_003143.1	RefSeq	gene	348976	349551	.	-	.	ID=gene329;Name=YPO0341;Dbxref=GeneID:1173186;gbkey=Gene;locus_tag=YPO0341
NC_003143.1	RefSeq	CDS	348976	349551	.	-	0	ID=cds317;Name=YP_002345419.1;Parent=gene329;Dbxref=InterPro:IPR001647,InterPro:IPR009057,InterPro:IPR011075,InterPro:IPR012287,UniProtKB%2FTrEMBL:Q74XD8,Genbank:YP_002345419.1,GeneID:1173186;gbkey=CDS;product=transcriptional regulator;protein_id=YP_002345419.1;transl_table=11
NC_003143.1	RefSeq	gene	349971	351986	.	+	.	ID=gene330;Name=YPO0342;Dbxref=GeneID:1173187;gbkey=Gene;locus_tag=YPO0342
NC_003143.1	RefSeq	CDS	349971	351986	.	+	0	ID=cds318;Name=YP_002345420.1;Parent=gene330;Note=unknown function%3B in E. coli the aegA gene is regulated by Fnr%2C NarXL%2C and NarQ %28but not ArcA%29%2C induced under anaerobic conditions and repressed in the presence of nitrate %28anaerobic%29;Dbxref=InterPro:IPR000103,InterPro:IPR000759,InterPro:IPR001327,InterPro:IPR001450,InterPro:IPR006006,InterPro:IPR012285,InterPro:IPR013027,UniProtKB%2FTrEMBL:Q0WJW8,Genbank:YP_002345420.1,GeneID:1173187;gbkey=CDS;product=oxidoreductase Fe-S binding subunit;protein_id=YP_002345420.1;transl_table=11
NC_003143.1	RefSeq	region	350229	350264	.	+	.	ID=id251;Note=PS00198 4Fe-4S ferredoxins%2C iron-sulfur binding region signature.;Dbxref=GeneID:1173187;gbkey=misc_feature
NC_003143.1	RefSeq	gene	352009	352566	.	+	.	ID=gene331;Name=hydN;Dbxref=GeneID:1173188;gbkey=Gene;gene=hydN;locus_tag=YPO0343
NC_003143.1	RefSeq	CDS	352009	352566	.	+	0	ID=cds319;Name=YP_002345421.1;Parent=gene331;Dbxref=InterPro:IPR001450,UniProtKB%2FTrEMBL:Q7CKN2,Genbank:YP_002345421.1,GeneID:1173188;gbkey=CDS;gene=hydN;product=4Fe-4S ferredoxin;protein_id=YP_002345421.1;transl_table=11
NC_003143.1	RefSeq	region	352273	352308	.	+	.	ID=id252;Note=PS00198 4Fe-4S ferredoxins%2C iron-sulfur binding region signature.;Dbxref=GeneID:1173188;gbkey=misc_feature;gene=hydN
NC_003143.1	RefSeq	region	352411	352428	.	+	.	ID=id253;Note=PS00190 Cytochrome c family heme-binding site signature.;Dbxref=GeneID:1173188;gbkey=misc_feature;gene=hydN
NC_003143.1	RefSeq	gene	352589	354736	.	+	.	ID=gene332;Name=fdhF;Dbxref=GeneID:1173189;gbkey=Gene;gene=fdhF;gene_synonym=fdhF;locus_tag=YPO0344
NC_003143.1	RefSeq	CDS	352589	354736	.	+	0	ID=cds320;Name=YP_002345422.1;Parent=gene332;Dbxref=InterPro:IPR006478,InterPro:IPR006655,InterPro:IPR006656,InterPro:IPR006657,InterPro:IPR006963,InterPro:IPR009010,UniProtKB%2FTrEMBL:Q7CKN1,Genbank:YP_002345422.1,GeneID:1173189;gbkey=CDS;gene=fdhF;product=formate dehydrogenase H;protein_id=YP_002345422.1;transl_table=11
NC_003143.1	RefSeq	region	352604	352657	.	+	.	ID=id254;Note=PS00551 Prokaryotic molybdopterin oxidoreductases signature 1.;Dbxref=GeneID:1173189;gbkey=misc_feature;gene=fdhF
NC_003143.1	RefSeq	region	353885	353938	.	+	.	ID=id255;Note=PS00490 Prokaryotic molybdopterin oxidoreductases signature 2.;Dbxref=GeneID:1173189;gbkey=misc_feature;gene=fdhF
NC_003143.1	RefSeq	region	354536	354568	.	+	.	ID=id256;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site.;Dbxref=GeneID:1173189;gbkey=misc_feature;gene=fdhF
NC_003143.1	RefSeq	gene	354798	356585	.	-	.	ID=gene333;Name=dipZ;Dbxref=GeneID:1173190;gbkey=Gene;gene=dipZ;gene_synonym=dsbD;locus_tag=YPO0345
NC_003143.1	RefSeq	CDS	354798	356585	.	-	0	ID=cds321;Name=YP_002345423.1;Parent=gene333;Note=two electrons are transferred from cytoplasmic NADPH to thioredoxin and then to the inner membrane protein DsbD which keeps the disulfide isomerase DsbC in a reduced state in the oxidizing periplasm%3B DsbC in turns rearranges incorrectly made disulfide bonds in the periplasm;Dbxref=InterPro:IPR003834,InterPro:IPR006662,InterPro:IPR012335,InterPro:IPR012336,InterPro:IPR013766,UniProtKB%2FTrEMBL:Q0WJW5,Genbank:YP_002345423.1,GeneID:1173190;gbkey=CDS;gene=dipZ;product=thiol:disulfide interchange protein;protein_id=YP_002345423.1;transl_table=11
NC_003143.1	RefSeq	region	355035	355091	.	-	.	ID=id257;Note=PS00194 Thioredoxin family active site.;Dbxref=GeneID:1173190;gbkey=misc_feature;gene=dipZ
NC_003143.1	RefSeq	gene	356561	356920	.	-	.	ID=gene334;Name=dipZ;Dbxref=GeneID:1173191;gbkey=Gene;gene=dipZ;locus_tag=YPO0346
NC_003143.1	RefSeq	CDS	356561	356920	.	-	0	ID=cds322;Name=YP_002345424.1;Parent=gene334;Note=copper binding protein required for copper tolerance%3B involved in resistance toward heavy metals;Dbxref=InterPro:IPR004323,UniProtKB%2FTrEMBL:Q0WJW4,Genbank:YP_002345424.1,GeneID:1173191;gbkey=CDS;product=divalent-cation tolerance protein CutA;protein_id=YP_002345424.1;transl_table=11
NC_003143.1	RefSeq	gene	357105	358406	.	-	.	ID=gene335;Name=dcuA;Dbxref=GeneID:1173192;gbkey=Gene;gene=dcuA;gene_synonym=genA;locus_tag=YPO0347
NC_003143.1	RefSeq	CDS	357105	358406	.	-	0	ID=cds323;Name=YP_002345425.1;Parent=gene335;Note=functions in anaerobic transport of C4-dicarboxylate compounds such as fumarate%3B similar to dcuB;Dbxref=InterPro:IPR004668,UniProtKB%2FTrEMBL:Q7CKM9,Genbank:YP_002345425.1,GeneID:1173192;gbkey=CDS;gene=dcuA;product=anaerobic C4-dicarboxylate transporter;protein_id=YP_002345425.1;transl_table=11
NC_003143.1	RefSeq	gene	358526	359962	.	-	.	ID=gene336;Name=aspA;Dbxref=GeneID:1173193;gbkey=Gene;gene=aspA;locus_tag=YPO0348
NC_003143.1	RefSeq	CDS	358526	359962	.	-	0	ID=cds324;Name=YP_002345426.1;Parent=gene336;Note=catalyzes the formation of fumarate from aspartate;Dbxref=InterPro:IPR000362,InterPro:IPR004708,InterPro:IPR008948,UniProtKB%2FTrEMBL:Q0WJW2,Genbank:YP_002345426.1,GeneID:1173193;gbkey=CDS;gene=aspA;product=aspartate ammonia-lyase;protein_id=YP_002345426.1;transl_table=11
NC_003143.1	RefSeq	region	358976	359005	.	-	.	ID=id258;Note=PS00163 Fumarate lyases signature.;Dbxref=GeneID:1173193;gbkey=misc_feature;gene=aspA
NC_003143.1	RefSeq	gene	360410	360988	.	+	.	ID=gene337;Name=fxsA;Dbxref=GeneID:1173194;gbkey=Gene;gene=fxsA;locus_tag=YPO0349
NC_003143.1	RefSeq	CDS	360410	360988	.	+	0	ID=cds325;Name=YP_002345427.1;Parent=gene337;Note=F exclusion of bacteriophage T7%3B overproduction of this protein in Escherichia coli inhibits the F plasmid-mediated exclusion of bacteriophage T7%3B interacts with the F plasmid-encoded PifA protein%3B inner membrane protein;Dbxref=InterPro:IPR007313,UniProtKB%2FTrEMBL:Q0WJW1,Genbank:YP_002345427.1,GeneID:1173194;gbkey=CDS;gene=fxsA;product=FxsA protein;protein_id=YP_002345427.1;transl_table=11
NC_003143.1	RefSeq	gene	361243	361536	.	+	.	ID=gene338;Name=groES;Dbxref=GeneID:1173195;gbkey=Gene;gene=groES;gene_synonym=hsp10;locus_tag=YPO0350
NC_003143.1	RefSeq	CDS	361243	361536	.	+	0	ID=cds326;Name=YP_002345428.1;Parent=gene338;Note=10 kDa chaperonin%3B Cpn10%3B GroES%3B forms homoheptameric ring%3B binds to one or both ends of the GroEL double barrel in the presence of adenine nucleotides capping it%3B folding of unfolded substrates initiates in a GroEL-substrate bound and capped by GroES%3B release of the folded substrate is dependent on ATP binding and hydrolysis in the trans ring;Dbxref=InterPro:IPR001476,InterPro:IPR011032,UniProtKB%2FTrEMBL:Q0WJW0,Genbank:YP_002345428.1,GeneID:1173195;gbkey=CDS;gene=groES;product=co-chaperonin GroES;protein_id=YP_002345428.1;transl_table=11
NC_003143.1	RefSeq	region	361249	361323	.	+	.	ID=id259;Note=PS00681 Chaperonins cpn10 signature.;Dbxref=GeneID:1173195;gbkey=misc_feature;gene=groES
NC_003143.1	RefSeq	gene	361583	363229	.	+	.	ID=gene339;Name=groEL;Dbxref=GeneID:1173196;gbkey=Gene;gene=groEL;gene_synonym=hsp60,mopA;locus_tag=YPO0351
NC_003143.1	RefSeq	CDS	361583	363229	.	+	0	ID=cds327;Name=YP_002345429.1;Parent=gene339;Note=60 kDa chaperone family%3B promotes refolding of misfolded polypeptides especially under stressful conditions%3B forms two stacked rings of heptamers to form a barrel-shaped 14mer%3B ends can be capped by GroES%3B misfolded proteins enter the barrel where they are refolded when GroES binds%3B many bacteria have multiple copies of the groEL gene which are active under different environmental conditions%3B the B.japonicum protein in this cluster is expressed constitutively%3B in Rhodobacter%2C Corynebacterium and Rhizobium this protein is essential for growth;Dbxref=InterPro:IPR001844,InterPro:IPR002423,InterPro:IPR008950,InterPro:IPR012723,UniProtKB%2FTrEMBL:Q0WJV9,Genbank:YP_002345429.1,GeneID:1173196;gbkey=CDS;gene=groEL;product=molecular chaperone GroEL;protein_id=YP_002345429.1;transl_table=11
NC_003143.1	RefSeq	region	362795	362830	.	+	.	ID=id260;Note=PS00296 Chaperonins cpn60 signature.;Dbxref=GeneID:1173196;gbkey=misc_feature;gene=groEL
NC_003143.1	RefSeq	gene	363865	364251	.	+	.	ID=gene340;Name=YPO0352;Dbxref=GeneID:1173197;gbkey=Gene;locus_tag=YPO0352
NC_003143.1	RefSeq	CDS	363865	364251	.	+	0	ID=cds328;Name=YP_002345430.1;Parent=gene340;Dbxref=UniProtKB%2FTrEMBL:Q0WJV8,Genbank:YP_002345430.1,GeneID:1173197;gbkey=CDS;product=lipoprotein;protein_id=YP_002345430.1;transl_table=11
NC_003143.1	RefSeq	region	363928	363960	.	+	.	ID=id261;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site.;Dbxref=GeneID:1173197;gbkey=misc_feature
NC_003143.1	RefSeq	gene	364536	365564	.	-	.	ID=gene341;Name=YPO0353;Dbxref=GeneID:1173198;gbkey=Gene;locus_tag=YPO0353
NC_003143.1	RefSeq	CDS	364536	365564	.	-	0	ID=cds329;Name=YP_002345431.1;Parent=gene341;Dbxref=InterPro:IPR003739,InterPro:IPR007197,UniProtKB%2FTrEMBL:Q7CKM8,Genbank:YP_002345431.1,GeneID:1173198;gbkey=CDS;product=hypothetical protein;protein_id=YP_002345431.1;transl_table=11
NC_003143.1	RefSeq	gene	365600	366166	.	+	.	ID=gene342;Name=efp;Dbxref=GeneID:1173199;gbkey=Gene;gene=efp;locus_tag=YPO0354
NC_003143.1	RefSeq	CDS	365600	366166	.	+	0	ID=cds330;Name=YP_002345432.1;Parent=gene342;Note=Involved in peptide bond synthesis%3B alters the affinity of the ribosome for aminoacyl-tRNA;Dbxref=InterPro:IPR001059,InterPro:IPR008991,InterPro:IPR008994,InterPro:IPR011768,InterPro:IPR012340,InterPro:IPR013185,InterPro:IPR013852,UniProtKB%2FTrEMBL:Q0WJV6,Genbank:YP_002345432.1,GeneID:1173199;gbkey=CDS;gene=efp;product=elongation factor P;protein_id=YP_002345432.1;transl_table=11
NC_003143.1	RefSeq	region	366053	366112	.	+	.	ID=id262;Note=PS01275 Elongation factor P signature.;Dbxref=GeneID:1173199;gbkey=misc_feature;gene=efp
NC_003143.1	RefSeq	gene	366413	366727	.	+	.	ID=gene343;Name=sugE;Dbxref=GeneID:1173200;gbkey=Gene;gene=sugE;locus_tag=YPO0355
NC_003143.1	RefSeq	CDS	366413	366727	.	+	0	ID=cds331;Name=YP_002345433.1;Parent=gene343;Note=member of the SMR family of proton-dependent drug efflux transporters%3B quaternary ammonium compound efflux pump%3B confers resistance to cetylpyridinium%2C cetyldimethylethyl ammonium and cetrimide cations;Dbxref=InterPro:IPR000390,UniProtKB%2FTrEMBL:Q0WJV5,Genbank:YP_002345433.1,GeneID:1173200;gbkey=CDS;gene=sugE;product=quaternary ammonium compound-resistance protein SugE;protein_id=YP_002345433.1;transl_table=11
NC_003143.1	RefSeq	repeat_region	366838	367549	.	-	.	ID=id263;Note=Contains a %27G%27 at nucleotide position 315%7EIS200-like insertion sequence:IS1541;gbkey=repeat_region
NC_003143.1	RefSeq	gene	366946	367404	.	-	.	ID=gene344;Name=tnp;Dbxref=GeneID:1173201;gbkey=Gene;gene=tnp;locus_tag=YPO0356
NC_003143.1	RefSeq	CDS	366946	367404	.	-	0	ID=cds332;Name=YP_002345434.1;Parent=gene344;Dbxref=InterPro:IPR002686,UniProtKB%2FTrEMBL:Q74YM6,Genbank:YP_002345434.1,GeneID:1173201;gbkey=CDS;gene=tnp;product=transposase for the IS1541 insertion element;protein_id=YP_002345434.1;transl_table=11
NC_003143.1	RefSeq	gene	367602	367958	.	-	.	ID=gene345;Name=frdD;Dbxref=GeneID:1173202;gbkey=Gene;gene=frdD;locus_tag=YPO0357
NC_003143.1	RefSeq	CDS	367602	367958	.	-	0	ID=cds333;Name=YP_002345435.1;Parent=gene345;Note=in conjunction with FrdC acts to anchor the catalytic components of the fumarate reductase to the cytoplasmic membrane;Dbxref=InterPro:IPR003418,UniProtKB%2FTrEMBL:Q0WJV3,Genbank:YP_002345435.1,GeneID:1173202;gbkey=CDS;gene=frdD;product=fumarate reductase subunit D;protein_id=YP_002345435.1;transl_table=11
NC_003143.1	RefSeq	gene	367975	368367	.	-	.	ID=gene346;Name=frdC;Dbxref=GeneID:1173203;gbkey=Gene;gene=frdC;locus_tag=YPO0358
NC_003143.1	RefSeq	CDS	367975	368367	.	-	0	ID=cds334;Name=YP_002345436.1;Parent=gene346;Note=part of four member fumarate reductase enzyme complex FrdABCD which catalyzes the reduction of fumarate to succinate during anaerobic respiration%3B FrdAB are the catalytic subcomplex consisting of a flavoprotein subunit and an iron-sulfur subunit%2C respectively%3B FrdCD are the membrane components which interact with quinone and are involved in electron transfer%3B the catalytic subunits are similar to succinate dehydrogenase SdhAB;Dbxref=InterPro:IPR003510,UniProtKB%2FTrEMBL:Q0WJV2,Genbank:YP_002345436.1,GeneID:1173203;gbkey=CDS;gene=frdC;product=fumarate reductase subunit C;protein_id=YP_002345436.1;transl_table=11
NC_003143.1	RefSeq	gene	368384	369118	.	-	.	ID=gene347;Name=frdB;Dbxref=GeneID:1173204;gbkey=Gene;gene=frdB;locus_tag=YPO0359
NC_003143.1	RefSeq	CDS	368384	369118	.	-	0	ID=cds335;Name=YP_002345437.1;Parent=gene347;Note=part of four member fumarate reductase enzyme complex FrdABCD which catalyzes the reduction of fumarate to succinate during anaerobic respiration%3B FrdAB are the catalytic subcomplex consisting of a flavoprotein subunit and an iron-sulfur subunit%2C respectively%3B FrdCD are the membrane components which interact with quinone and are involved in electron transfer%3B the catalytic subunits are similar to succinate dehydrogenase SdhAB;Dbxref=InterPro:IPR001041,InterPro:IPR001450,InterPro:IPR004489,InterPro:IPR006058,InterPro:IPR009051,InterPro:IPR012285,InterPro:IPR012675,UniProtKB%2FTrEMBL:Q7CKM7,Genbank:YP_002345437.1,GeneID:1173204;gbkey=CDS;gene=frdB;product=fumarate reductase iron-sulfur subunit;protein_id=YP_002345437.1;transl_table=11
NC_003143.1	RefSeq	region	368639	368674	.	-	.	ID=id264;Note=PS00198 4Fe-4S ferredoxins%2C iron-sulfur binding region signature.;Dbxref=GeneID:1173204;gbkey=misc_feature;gene=frdB
NC_003143.1	RefSeq	region	368921	368947	.	-	.	ID=id265;Note=PS00197 2Fe-2S ferredoxins%2C iron-sulfur binding region signature.;Dbxref=GeneID:1173204;gbkey=misc_feature;gene=frdB
NC_003143.1	RefSeq	gene	369111	370934	.	-	.	ID=gene348;Name=frdA;Dbxref=GeneID:1173205;gbkey=Gene;gene=frdA;locus_tag=YPO0360
NC_003143.1	RefSeq	CDS	369111	370934	.	-	0	ID=cds336;Name=YP_002345438.1;Parent=gene348;Note=part of four member fumarate reductase enzyme complex FrdABCD which catalyzes the reduction of fumarate to succinate during anaerobic respiration%3B FrdAB are the catalytic subcomplex consisting of a flavoprotein subunit and an iron-sulfur subunit%2C respectively%3B FrdCD are the membrane components which interact with quinone and are involved in electron transfer%3B the catalytic subunits are similar to succinate dehydrogenase SdhAB;Dbxref=InterPro:IPR001100,InterPro:IPR003952,InterPro:IPR003953,InterPro:IPR004112,InterPro:IPR005884,InterPro:IPR013027,InterPro:IPR014006,UniProtKB%2FTrEMBL:Q7CKM6,Genbank:YP_002345438.1,GeneID:1173205;gbkey=CDS;gene=frdA;product=fumarate reductase flavoprotein subunit;protein_id=YP_002345438.1;transl_table=11
NC_003143.1	RefSeq	region	370779	370808	.	-	.	ID=id266;Note=PS00504 Fumarate reductase %2F succinate dehydrogenase FAD-binding site.;Dbxref=GeneID:1173205;gbkey=misc_feature;gene=frdA
NC_003143.1	RefSeq	region	371083	371151	.	+	.	ID=id267;Note=1 probable transmembrane helix predicted;gbkey=misc_feature
NC_003143.1	RefSeq	gene	371392	372369	.	+	.	ID=gene349;Name=genX;Dbxref=GeneID:1173207;gbkey=Gene;gene=genX;gene_synonym=genX,poxA;locus_tag=YPO0362
NC_003143.1	RefSeq	CDS	371392	372369	.	+	0	ID=cds337;Name=YP_002345440.1;Parent=gene349;Note=lysine--tRNA ligase beta chain%3B poxA%3B class II aminoacyl tRNA synthetase%3B catalyzes a two-step reaction%3B first charging a lysine molecule by linking the carboxyl group to the alpha-phosphate of ATP%3B second by transfer of the aminoacyl-adenylate to its tRNA;Dbxref=InterPro:IPR002313,InterPro:IPR004364,InterPro:IPR004525,InterPro:IPR006195,UniProtKB%2FTrEMBL:Q0WJU8,Genbank:YP_002345440.1,GeneID:1173207;gbkey=CDS;gene=genX;product=lysyl-tRNA synthetase;protein_id=YP_002345440.1;transl_table=11
NC_003143.1	RefSeq	region	371686	371739	.	+	.	ID=id268;Note=PS00179 Aminoacyl-transfer RNA synthetases class-II signature 1.;Dbxref=GeneID:1173207;gbkey=misc_feature;gene=genX
NC_003143.1	RefSeq	region	372283	372312	.	+	.	ID=id269;Note=PS00339 Aminoacyl-transfer RNA synthetases class-II signature 2.;Dbxref=GeneID:1173207;gbkey=misc_feature;gene=genX
NC_003143.1	RefSeq	gene	372490	375849	.	-	.	ID=gene350;Name=YPO0363;Dbxref=GeneID:1173208;gbkey=Gene;locus_tag=YPO0363
NC_003143.1	RefSeq	CDS	372490	375849	.	-	0	ID=cds338;Name=YP_002345441.1;Parent=gene350;Dbxref=InterPro:IPR006685,InterPro:IPR006686,InterPro:IPR010920,InterPro:IPR011014,InterPro:IPR011066,UniProtKB%2FTrEMBL:Q7CKM5,Genbank:YP_002345441.1,GeneID:1173208;gbkey=CDS;product=hypothetical protein;protein_id=YP_002345441.1;transl_table=11
NC_003143.1	RefSeq	region	372865	372969	.	-	.	ID=id270;Note=PS01246 Uncharacterized protein family UPF0003 signature.;Dbxref=GeneID:1173208;gbkey=misc_feature
NC_003143.1	RefSeq	gene	375873	376754	.	-	.	ID=gene351;Name=psd;Dbxref=GeneID:1173209;gbkey=Gene;gene=psd;locus_tag=YPO0364
NC_003143.1	RefSeq	CDS	375873	376754	.	-	0	ID=cds339;Name=YP_002345442.1;Parent=gene351;Note=catalyzes the decarboxylation of phosphatidyl-L-serine to phosphatidylethanoleamine;Dbxref=InterPro:IPR003817,InterPro:IPR005221,UniProtKB%2FTrEMBL:Q0WJU6,Genbank:YP_002345442.1,GeneID:1173209;gbkey=CDS;gene=psd;product=phosphatidylserine decarboxylase;protein_id=YP_002345442.1;transl_table=11
NC_003143.1	RefSeq	gene	377079	378131	.	-	.	ID=gene352;Name=YPO0365;Dbxref=GeneID:1173210;gbkey=Gene;locus_tag=YPO0365
NC_003143.1	RefSeq	CDS	377079	378131	.	-	0	ID=cds340;Name=YP_002345443.1;Parent=gene352;Note=EngC%3B RsgA%3B CpgA%3B circularly permuted GTPase%3B ribosome small subunit-dependent GTPase A%3B has the pattern G4-G1-G3 as opposed to other GTPases%3B interacts strongly with 30S ribosome which stimulates GTPase activity;Dbxref=InterPro:IPR004881,InterPro:IPR008994,InterPro:IPR010914,UniProtKB%2FTrEMBL:Q0WJU5,Genbank:YP_002345443.1,GeneID:1173210;gbkey=CDS;product=ribosome-associated GTPase;protein_id=YP_002345443.1;transl_table=11
NC_003143.1	RefSeq	region	377472	377495	.	-	.	ID=id271;Note=PS00017 ATP%2FGTP-binding site motif A %28P-loop%29.;Dbxref=GeneID:1173210;gbkey=misc_feature
NC_003143.1	RefSeq	gene	378331	378876	.	+	.	ID=gene353;Name=orn;Dbxref=GeneID:1173211;gbkey=Gene;gene=orn;locus_tag=YPO0366
NC_003143.1	RefSeq	CDS	378331	378876	.	+	0	ID=cds341;Name=YP_002345444.1;Parent=gene353;Note=3%27-5%27 exoribonuclease specific for small oligoribonuclotides;Dbxref=InterPro:IPR006055,InterPro:IPR012337,InterPro:IPR013520,UniProtKB%2FTrEMBL:Q0WJU4,Genbank:YP_002345444.1,GeneID:1173211;gbkey=CDS;gene=orn;product=oligoribonuclease;protein_id=YP_002345444.1;transl_table=11
NC_003143.1	RefSeq	gene	379434	379509	.	+	.	ID=gene354;Name=YPt_03;Dbxref=GeneID:1173212;gbkey=Gene;locus_tag=YPt_03
NC_003143.1	RefSeq	tRNA	379434	379509	.	+	.	ID=rna6;Parent=gene354;Note=tRNA Gly anticodon GCC%2C Cove score 93.74;Dbxref=GeneID:1173212;gbkey=tRNA;product=tRNA-Gly
NC_003143.1	RefSeq	exon	379434	379509	.	+	.	ID=id272;Parent=rna6;Note=tRNA Gly anticodon GCC%2C Cove score 93.74;Dbxref=GeneID:1173212;gbkey=tRNA;product=tRNA-Gly
NC_003143.1	RefSeq	gene	379821	381056	.	-	.	ID=gene355;Name=YPO0367;Dbxref=GeneID:1173213;gbkey=Gene;locus_tag=YPO0367
NC_003143.1	RefSeq	CDS	379821	381056	.	-	0	ID=cds342;Name=YP_002345445.1;Parent=gene355;Dbxref=InterPro:IPR001450,InterPro:IPR004453,InterPro:IPR009051,InterPro:IPR013542,UniProtKB%2FTrEMBL:Q7CKM4,Genbank:YP_002345445.1,GeneID:1173213;gbkey=CDS;product=%28Fe-S%29-binding protein;protein_id=YP_002345445.1;transl_table=11
NC_003143.1	RefSeq	region	380349	380384	.	-	.	ID=id273;Note=PS00198 4Fe-4S ferredoxins%2C iron-sulfur binding region signature.;Dbxref=GeneID:1173213;gbkey=misc_feature
NC_003143.1	RefSeq	gene	381055	382569	.	+	.	ID=gene356;Name=YPO0368;Dbxref=GeneID:1173214;gbkey=Gene;locus_tag=YPO0368
NC_003143.1	RefSeq	CDS	381055	382569	.	+	0	ID=cds343;Name=YP_002345446.1;Parent=gene356;Dbxref=InterPro:IPR000631,InterPro:IPR004443,UniProtKB%2FTrEMBL:Q7CKM3,Genbank:YP_002345446.1,GeneID:1173214;gbkey=CDS;product=hypothetical protein;protein_id=YP_002345446.1;transl_table=11
NC_003143.1	RefSeq	gene	382580	383050	.	+	.	ID=gene357;Name=YPO0369;Dbxref=GeneID:1173215;gbkey=Gene;locus_tag=YPO0369
NC_003143.1	RefSeq	CDS	382580	383050	.	+	0	ID=cds344;Name=YP_002345447.1;Parent=gene357;Note=possibly involved in cell wall synthesis;Dbxref=InterPro:IPR003442,InterPro:IPR012298,UniProtKB%2FTrEMBL:Q7CKM2,Genbank:YP_002345447.1,GeneID:1173215;gbkey=CDS;product=ATPase;protein_id=YP_002345447.1;transl_table=11
NC_003143.1	RefSeq	region	382682	382705	.	+	.	ID=id274;Note=PS00017 ATP%2FGTP-binding site motif A %28P-loop%29.;Dbxref=GeneID:1173215;gbkey=misc_feature
NC_003143.1	RefSeq	gene	383190	384971	.	+	.	ID=gene358;Name=YPO0370;Dbxref=GeneID:1173216;gbkey=Gene;locus_tag=YPO0370
NC_003143.1	RefSeq	CDS	383190	384971	.	+	0	ID=cds345;Name=YP_002345448.1;Parent=gene358;Dbxref=InterPro:IPR002482,InterPro:IPR002508,UniProtKB%2FTrEMBL:Q0WJU0,Genbank:YP_002345448.1,GeneID:1173216;gbkey=CDS;product=N-acetylmuramoyl-L-alanine amidase;protein_id=YP_002345448.1;transl_table=11
NC_003143.1	RefSeq	region	384606	384629	.	+	.	ID=id275;Note=PS00017 ATP%2FGTP-binding site motif A %28P-loop%29.;Dbxref=GeneID:1173216;gbkey=misc_feature
NC_003143.1	RefSeq	region	384852	384917	.	+	.	ID=id276;Note=Predicted helix-turn-helix motif with score 1170 %28%2B3.17 SD%29 at aa 599-620%2C sequence DTLSAIAARYGVSMSEIERVNK;Dbxref=GeneID:1173216;gbkey=misc_feature
NC_003143.1	RefSeq	gene	384987	386894	.	+	.	ID=gene359;Name=mutL;Dbxref=GeneID:1173217;gbkey=Gene;gene=mutL;locus_tag=YPO0371
NC_003143.1	RefSeq	CDS	384987	386894	.	+	0	ID=cds346;Name=YP_002345449.1;Parent=gene359;Note=This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. Promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex;Dbxref=InterPro:IPR002099,InterPro:IPR003594,InterPro:IPR013507,UniProtKB%2FTrEMBL:Q0WJT9,Genbank:YP_002345449.1,GeneID:1173217;gbkey=CDS;gene=mutL;product=DNA mismatch repair protein;protein_id=YP_002345449.1;transl_table=11
NC_003143.1	RefSeq	region	385263	385283	.	+	.	ID=id277;Note=PS00058 DNA mismatch repair proteins mutL %2F hexB %2F PMS1 signature.;Dbxref=GeneID:1173217;gbkey=misc_feature;gene=mutL
NC_003143.1	RefSeq	gene	386887	387828	.	+	.	ID=gene360;Name=miaA;Dbxref=GeneID:1173218;gbkey=Gene;gene=miaA;gene_synonym=trpX;locus_tag=YPO0372
NC_003143.1	RefSeq	CDS	386887	387828	.	+	0	ID=cds347;Name=YP_002345450.1;Parent=gene360;Note=IPP transferase%3B isopentenyltransferase%3B involved in tRNA modification%3B in Escherichia coli this enzyme catalyzes the addition of a delta2-isopentenyl group from dimethylallyl diphosphate to the N6-nitrogen of adenosine adjacent to the anticodon of tRNA species that read codons starting with uracil%3B further tRNA modifications may occur%3B mutations in miaA result in defects in translation efficiency and fidelity;Dbxref=InterPro:IPR002627,InterPro:IPR011593,UniProtKB%2FTrEMBL:Q0WJT8,Genbank:YP_002345450.1,GeneID:1173218;gbkey=CDS;gene=miaA;product=tRNA delta%282%29-isopentenylpyrophosphate transferase;protein_id=YP_002345450.1;transl_table=11
NC_003143.1	RefSeq	region	386935	386958	.	+	.	ID=id278;Note=PS00017 ATP%2FGTP-binding site motif A %28P-loop%29.;Dbxref=GeneID:1173218;gbkey=misc_feature;gene=miaA
NC_003143.1	RefSeq	gene	387944	388249	.	+	.	ID=gene361;Name=hfq;Dbxref=GeneID:1173219;gbkey=Gene;gene=hfq;locus_tag=YPO0373
NC_003143.1	RefSeq	CDS	387944	388249	.	+	0	ID=cds348;Name=YP_002345451.1;Parent=gene361;Note=Stimulates the elongation of poly%28A%29 tails;Dbxref=InterPro:IPR001163,InterPro:IPR005001,InterPro:IPR010920,UniProtKB%2FTrEMBL:Q0WJT7,Genbank:YP_002345451.1,GeneID:1173219;gbkey=CDS;gene=hfq;product=RNA-binding protein Hfq;protein_id=YP_002345451.1;transl_table=11
NC_003143.1	RefSeq	gene	388348	389634	.	+	.	ID=gene362;Name=hflX;Dbxref=GeneID:1173220;gbkey=Gene;gene=hflX;locus_tag=YPO0374
NC_003143.1	RefSeq	CDS	388348	389634	.	+	0	ID=cds349;Name=YP_002345452.1;Parent=gene362;Note=involved in modulation of proteins HflK and HflC%3B part of the hflA locus %28high frequency of lysogenization%29 which governs the lysis-lysogeny decision of bacteriophage lambda by controlling stability of the phage cII protein;Dbxref=InterPro:IPR001806,InterPro:IPR002917,InterPro:IPR006073,UniProtKB%2FTrEMBL:Q7CKM1,Genbank:YP_002345452.1,GeneID:1173220;gbkey=CDS;gene=hflX;product=GTPase HflX;protein_id=YP_002345452.1;transl_table=11
NC_003143.1	RefSeq	region	388957	388980	.	+	.	ID=id279;Note=PS00017 ATP%2FGTP-binding site motif A %28P-loop%29.;Dbxref=GeneID:1173220;gbkey=misc_feature;gene=hflX
NC_003143.1	RefSeq	gene	389875	391134	.	+	.	ID=gene363;Name=hflK;Dbxref=GeneID:1173221;gbkey=Gene;gene=hflK;locus_tag=YPO0375
NC_003143.1	RefSeq	CDS	389875	391134	.	+	0	ID=cds350;Name=YP_002345453.1;Parent=gene363;Note=with HflC inhibits proteolysis of lambda cII protein by FtsH;Dbxref=InterPro:IPR001107,InterPro:IPR001972,InterPro:IPR010201,UniProtKB%2FTrEMBL:Q7CKM0,Genbank:YP_002345453.1,GeneID:1173221;gbkey=CDS;gene=hflK;product=FtsH protease regulator HflK;protein_id=YP_002345453.1;transl_table=11
NC_003143.1	RefSeq	region	390100	390168	.	+	.	ID=id280;Note=1 probable transmembrane helix predicted;Dbxref=GeneID:1173221;gbkey=misc_feature;gene=hflK
NC_003143.1	RefSeq	gene	391138	392142	.	+	.	ID=gene364;Name=hflC;Dbxref=GeneID:1173222;gbkey=Gene;gene=hflC;locus_tag=YPO0376
NC_003143.1	RefSeq	CDS	391138	392142	.	+	0	ID=cds351;Name=YP_002345454.1;Parent=gene364;Note=with HflK inhibits proteolysis of lambda cII protein by FtsH;Dbxref=InterPro:IPR001107,InterPro:IPR010200,UniProtKB%2FTrEMBL:Q7CKL9,Genbank:YP_002345454.1,GeneID:1173222;gbkey=CDS;gene=hflC;product=FtsH protease regulator HflC;protein_id=YP_002345454.1;transl_table=11
NC_003143.1	RefSeq	region	391150	391206	.	+	.	ID=id281;Note=1 probable transmembrane helix predicted;Dbxref=GeneID:1173222;gbkey=misc_feature;gene=hflC
NC_003143.1	RefSeq	gene	392314	392514	.	+	.	ID=gene365;Name=YPO0377;Dbxref=GeneID:1173223;gbkey=Gene;locus_tag=YPO0377
NC_003143.1	RefSeq	CDS	392314	392514	.	+	0	ID=cds352;Name=YP_002345455.1;Parent=gene365;Dbxref=UniProtKB%2FTrEMBL:Q0WJT3,Genbank:YP_002345455.1,GeneID:1173223;gbkey=CDS;product=hypothetical protein;protein_id=YP_002345455.1;transl_table=11
NC_003143.1	RefSeq	gene	392614	393912	.	+	.	ID=gene366;Name=purA;Dbxref=GeneID:1173224;gbkey=Gene;gene=purA;locus_tag=YPO0378
NC_003143.1	RefSeq	CDS	392614	393912	.	+	0	ID=cds353;Name=YP_002345456.1;Parent=gene366;Note=catalyzes the formation of N6-%281%2C2%2C-dicarboxyethyl%29-AMP from L-aspartate%2C inosine monophosphate and GTP in AMP biosynthesis;Dbxref=InterPro:IPR001114,UniProtKB%2FTrEMBL:Q0WJT2,Genbank:YP_002345456.1,GeneID:1173224;gbkey=CDS;gene=purA;product=adenylosuccinate synthetase;protein_id=YP_002345456.1;transl_table=11
NC_003143.1	RefSeq	region	392644	392667	.	+	.	ID=id282;Note=PS01266 Adenylosuccinate synthetase GTP-binding site.;Dbxref=GeneID:1173224;gbkey=misc_feature;gene=purA
NC_003143.1	RefSeq	region	393010	393045	.	+	.	ID=id283;Note=PS00513 Adenylosuccinate synthetase active site.;Dbxref=GeneID:1173224;gbkey=misc_feature;gene=purA
NC_003143.1	RefSeq	gene	394281	394706	.	+	.	ID=gene367;Name=YPO0379;Dbxref=GeneID:1173225;gbkey=Gene;locus_tag=YPO0379
NC_003143.1	RefSeq	CDS	394281	394706	.	+	0	ID=cds354;Name=YP_002345457.1;Parent=gene367;Note=negatively regulates the transcription of genes upregulated by nitrosative stress;Dbxref=InterPro:IPR000944,InterPro:IPR011991,UniProtKB%2FTrEMBL:Q0WJT1,Genbank:YP_002345457.1,GeneID:1173225;gbkey=CDS;product=transcriptional repressor NsrR;protein_id=YP_002345457.1;transl_table=11
NC_003143.1	RefSeq	region	394356	394421	.	+	.	ID=id284;Note=Predicted helix-turn-helix motif with score 1116 %28%2B2.99 SD%29 at aa 26-47%2C sequence TSISQVTEVYGVSRNHMVKIIN;Dbxref=GeneID:1173225;gbkey=misc_feature
NC_003143.1	RefSeq	region	394425	394481	.	+	.	ID=id285;Note=PS01332 Uncharacterized protein family UPF0074 signature.;Dbxref=GeneID:1173225;gbkey=misc_feature
NC_003143.1	RefSeq	gene	394947	397481	.	+	.	ID=gene368;Name=rnr;Dbxref=GeneID:1173226;gbkey=Gene;gene=rnr;gene_synonym=vacB;locus_tag=YPO0380
NC_003143.1	RefSeq	CDS	394947	397481	.	+	0	ID=cds355;Name=YP_002345458.1;Parent=gene368;Note=3%27-5%27exoribonuclease that acts nonspecifically on poly%28A%29%2C poly%28U%29 and ribosomal RNAs;Dbxref=InterPro:IPR001900,InterPro:IPR003029,InterPro:IPR004476,InterPro:IPR008994,InterPro:IPR011129,InterPro:IPR011805,InterPro:IPR011991,InterPro:IPR012340,InterPro:IPR013223,InterPro:IPR013668,UniProtKB%2FTrEMBL:Q7CKL8,Genbank:YP_002345458.1,GeneID:1173226;gbkey=CDS;gene=rnr;product=exoribonuclease R;protein_id=YP_002345458.1;transl_table=11
NC_003143.1	RefSeq	gene	397600	398340	.	+	.	ID=gene369;Name=YPO0381;Dbxref=GeneID:1173227;gbkey=Gene;locus_tag=YPO0381
NC_003143.1	RefSeq	CDS	397600	398340	.	+	0	ID=cds356;Name=YP_002345459.1;Parent=gene369;Note=Specifically methylates the ribose of guanosine 2251 in 23S rRNA;Dbxref=InterPro:IPR001537,InterPro:IPR004441,InterPro:IPR013123,UniProtKB%2FTrEMBL:Q0WJS9,Genbank:YP_002345459.1,GeneID:1173227;gbkey=CDS;product=23S rRNA %28guanosine-2%27-O-%29-methyltransferase;protein_id=YP_002345459.1;transl_table=11
NC_003143.1	RefSeq	gene	398748	400391	.	+	.	ID=gene370;Name=aidB;Dbxref=GeneID:1173228;gbkey=Gene;gene=aidB;locus_tag=YPO0383
NC_003143.1	RefSeq	CDS	398748	400391	.	+	0	ID=cds357;Name=YP_002345460.1;Parent=gene370;Note=catalyzes the formation of 3-methylcrotonyl-CoA from isovaleryl-CoA;Dbxref=InterPro:IPR006089,InterPro:IPR006090,InterPro:IPR006091,InterPro:IPR006092,InterPro:IPR009075,InterPro:IPR009100,InterPro:IPR013764,UniProtKB%2FTrEMBL:Q0WJS8,Genbank:YP_002345460.1,GeneID:1173228;gbkey=CDS;gene=aidB;product=isovaleryl CoA dehydrogenase;protein_id=YP_002345460.1;transl_table=11
NC_003143.1	RefSeq	region	399306	399344	.	+	.	ID=id286;Note=PS00072 Acyl-CoA dehydrogenases signature 1.;Dbxref=GeneID:1173228;gbkey=misc_feature;gene=aidB
NC_003143.1	RefSeq	gene	400463	400774	.	-	.	ID=gene371;Name=YPO0384;Dbxref=GeneID:1173229;gbkey=Gene;locus_tag=YPO0384
NC_003143.1	RefSeq	CDS	400463	400774	.	-	0	ID=cds358;Name=YP_002345461.1;Parent=gene371;Note=in Escherichia coli%2C mutation of this gene affects biofilm maturation%2C stress response%2C and motility;Dbxref=InterPro:IPR010854,UniProtKB%2FTrEMBL:Q0WJS7,Genbank:YP_002345461.1,GeneID:1173229;gbkey=CDS;product=biofilm stress and motility protein A;protein_id=YP_002345461.1;transl_table=11
NC_003143.1	RefSeq	region	400715	400747	.	-	.	ID=id287;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site.;Dbxref=GeneID:1173229;gbkey=misc_feature
NC_003143.1	RefSeq	repeat_region	401048	403001	.	-	.	ID=id288;Note=insertion sequence:IS100;gbkey=repeat_region
NC_003143.1	RefSeq	repeat_region	401048	401075	.	+	.	ID=id289;Note=IS100 inverted repeat;gbkey=repeat_region
NC_003143.1	RefSeq	gene	401114	401896	.	-	.	ID=gene372;Name=YPO0385;Note=ypmt1.57c;Dbxref=GeneID:1173230;gbkey=Gene;locus_tag=YPO0385
NC_003143.1	RefSeq	CDS	401114	401896	.	-	0	ID=cds359;Name=YP_002345462.1;Parent=gene372;Dbxref=InterPro:IPR001270,InterPro:IPR002611,InterPro:IPR003593,UniProtKB%2FTrEMBL:Q7ARK4,Genbank:YP_002345462.1,GeneID:1173230;gbkey=CDS;product=transposase%2FIS protein;protein_id=YP_002345462.1;transl_table=11
NC_003143.1	RefSeq	region	401546	401569	.	-	.	ID=id290;Note=PS00017 ATP%2FGTP-binding site motif A %28P-loop%29.;Dbxref=GeneID:1173230;gbkey=misc_feature
NC_003143.1	RefSeq	gene	401893	402915	.	-	.	ID=gene373;Name=y1093;Dbxref=GeneID:1173231;gbkey=Gene;gene=y1093;gene_synonym=ypmt1;locus_tag=YPO0386
NC_003143.1	RefSeq	CDS	401893	402915	.	-	0	ID=cds360;Name=YP_002345463.1;Parent=gene373;Dbxref=InterPro:IPR001584,InterPro:IPR006120,InterPro:IPR009057,InterPro:IPR012287,InterPro:IPR012337,UniProtKB%2FTrEMBL:Q7ARN5,Genbank:YP_002345463.1,GeneID:1173231;gbkey=CDS;gene=y1093;product=transposase for insertion sequence IS100;protein_id=YP_002345463.1;transl_table=11
NC_003143.1	RefSeq	region	402799	402864	.	-	.	ID=id291;Note=Predicted helix-turn-helix motif with score 2147 %28%2B6.50 SD%29 at aa 18-39%2C sequence MSSRAIARELGISRNTVKRYLQ;Dbxref=GeneID:1173231;gbkey=misc_feature;gene=y1093
NC_003143.1	RefSeq	repeat_region	402974	403001	.	-	.	ID=id292;Note=IS100 inverted repeat;gbkey=repeat_region
NC_003143.1	RefSeq	gene	403049	405112	.	+	.	ID=gene374;Name=YPO0387;Dbxref=GeneID:1173232;gbkey=Gene;locus_tag=YPO0387
NC_003143.1	RefSeq	CDS	403049	405112	.	+	0	ID=cds361;Name=YP_002345464.1;Parent=gene374;Dbxref=InterPro:IPR003593,InterPro:IPR011704,UniProtKB%2FTrEMBL:Q74PU0,Genbank:YP_002345464.1,GeneID:1173232;gbkey=CDS;product=hypothetical protein;protein_id=YP_002345464.1;transl_table=11
NC_003143.1	RefSeq	region	403751	403774	.	+	.	ID=id293;Note=PS00017 ATP%2FGTP-binding site motif A %28P-loop%29.;Dbxref=GeneID:1173232;gbkey=misc_feature
NC_003143.1	RefSeq	gene	405109	406425	.	+	.	ID=gene375;Name=YPO0388;Dbxref=GeneID:1173233;gbkey=Gene;locus_tag=YPO0388
NC_003143.1	RefSeq	CDS	405109	406425	.	+	0	ID=cds362;Name=YP_002345465.1;Parent=gene375;Dbxref=UniProtKB%2FTrEMBL:Q7CG32,Genbank:YP_002345465.1,GeneID:1173233;gbkey=CDS;product=hypothetical protein;protein_id=YP_002345465.1;transl_table=11
NC_003143.1	RefSeq	gene	407047	407310	.	-	.	ID=gene376;Name=YPO0392a;Dbxref=GeneID:17699566;gbkey=Gene;locus_tag=YPO0392a
NC_003143.1	RefSeq	CDS	407047	407310	.	-	0	ID=cds363;Name=YP_008853943.1;Parent=gene376;Dbxref=Genbank:YP_008853943.1,GeneID:17699566;gbkey=CDS;product=hypothetical protein;protein_id=YP_008853943.1;transl_table=11
NC_003143.1	RefSeq	region	407444	411230	.	+	.	ID=id294;Note=Region of low GC%25 content%2C 30.41%25. Possible horizontal gene transfer;gbkey=misc_feature
NC_003143.1	RefSeq	gene	407449	408774	.	+	.	ID=gene377;Name=YPO0391;Dbxref=GeneID:1173236;gbkey=Gene;locus_tag=YPO0391
NC_003143.1	RefSeq	CDS	407449	408774	.	+	0	ID=cds364;Name=YP_002345468.1;Parent=gene377;Dbxref=InterPro:IPR002941,UniProtKB%2FTrEMBL:Q7CG34,Genbank:YP_002345468.1,GeneID:1173236;gbkey=CDS;product=modification methylase;protein_id=YP_002345468.1;transl_table=11
NC_003143.1	RefSeq	gene	408824	409546	.	+	.	ID=gene378;Name=YPO0392;Dbxref=GeneID:1173237;gbkey=Gene;locus_tag=YPO0392
NC_003143.1	RefSeq	CDS	408824	409546	.	+	0	ID=cds365;Name=YP_002345469.1;Parent=gene378;Dbxref=InterPro:IPR003594,UniProtKB%2FTrEMBL:Q7CG35,Genbank:YP_002345469.1,GeneID:1173237;gbkey=CDS;product=hypothetical protein;protein_id=YP_002345469.1;transl_table=11
NC_003143.1	RefSeq	gene	409656	410891	.	+	.	ID=gene379;Name=YPO0393;Dbxref=GeneID:1173238;gbkey=Gene;locus_tag=YPO0393
NC_003143.1	RefSeq	CDS	409656	410891	.	+	0	ID=cds366;Name=YP_002345470.1;Parent=gene379;Dbxref=UniProtKB%2FTrEMBL:Q0WJR8,Genbank:YP_002345470.1,GeneID:1173238;gbkey=CDS;product=hypothetical protein;protein_id=YP_002345470.1;transl_table=11
NC_003143.1	RefSeq	region	410610	410675	.	+	.	ID=id295;Note=Predicted helix-turn-helix motif with score 1280 %28%2B3.55 SD%29 at aa 319-340%2C sequence KLLTKIAERLDISYSTFTNSLN;Dbxref=GeneID:1173238;gbkey=misc_feature
NC_003143.1	RefSeq	gene	411235	411522	.	-	.	ID=gene380;Name=YPO0394;Dbxref=GeneID:1173239;gbkey=Gene;locus_tag=YPO0394
NC_003143.1	RefSeq	CDS	411235	411522	.	-	0	ID=cds367;Name=YP_002345471.1;Parent=gene380;Note=No significant database hits;Dbxref=UniProtKB%2FTrEMBL:Q7CG36,Genbank:YP_002345471.1,GeneID:1173239;gbkey=CDS;product=hypothetical protein;protein_id=YP_002345471.1;transl_table=11
NC_003143.1	RefSeq	gene	411724	411921	.	-	.	ID=gene381;Name=YPO0394a;Dbxref=GeneID:16744736;gbkey=Gene;locus_tag=YPO0394a
NC_003143.1	RefSeq	CDS	411724	411921	.	-	0	ID=cds368;Name=YP_008479679.1;Parent=gene381;Dbxref=Genbank:YP_008479679.1,GeneID:16744736;gbkey=CDS;product=hypothetical protein;protein_id=YP_008479679.1;transl_table=11
NC_003143.1	RefSeq	gene	412139	413551	.	+	.	ID=gene382;Name=YPO0396;Dbxref=GeneID:1173241;gbkey=Gene;locus_tag=YPO0396
NC_003143.1	RefSeq	CDS	412139	413551	.	+	0	ID=cds369;Name=YP_002345473.1;Parent=gene382;Dbxref=UniProtKB%2FTrEMBL:Q0WJR5,Genbank:YP_002345473.1,GeneID:1173241;gbkey=CDS;product=hypothetical protein;protein_id=YP_002345473.1;transl_table=11
NC_003143.1	RefSeq	gene	413548	414702	.	+	.	ID=gene383;Name=YPO0397;Dbxref=GeneID:1173242;gbkey=Gene;locus_tag=YPO0397
NC_003143.1	RefSeq	CDS	413548	414702	.	+	0	ID=cds370;Name=YP_002345474.1;Parent=gene383;Dbxref=UniProtKB%2FTrEMBL:Q7CG38,Genbank:YP_002345474.1,GeneID:1173242;gbkey=CDS;product=hypothetical protein;protein_id=YP_002345474.1;transl_table=11
NC_003143.1	RefSeq	gene	414848	415894	.	-	.	ID=gene384;Name=YPO0398;Dbxref=GeneID:1173243;gbkey=Gene;locus_tag=YPO0398
NC_003143.1	RefSeq	CDS	414848	415894	.	-	0	ID=cds371;Name=YP_002345475.1;Parent=gene384;Dbxref=InterPro:IPR001915,UniProtKB%2FTrEMBL:Q7CG39,Genbank:YP_002345475.1,GeneID:1173243;gbkey=CDS;product=M48 peptidase family protein;protein_id=YP_002345475.1;transl_table=11
NC_003143.1	RefSeq	region	415541	415606	.	-	.	ID=id296;Note=1 probable transmembrane helix predicted;Dbxref=GeneID:1173243;gbkey=misc_feature
NC_003143.1	RefSeq	gene	415905	417101	.	-	.	ID=gene385;Name=YPO0399;Dbxref=GeneID:1173244;gbkey=Gene;locus_tag=YPO0399
NC_003143.1	RefSeq	CDS	415905	417101	.	-	0	ID=cds372;Name=YP_002345476.1;Parent=gene385;Dbxref=InterPro:IPR010295,UniProtKB%2FTrEMBL:Q7CG40,Genbank:YP_002345476.1,GeneID:1173244;gbkey=CDS;product=hypothetical protein;protein_id=YP_002345476.1;transl_table=11
NC_003143.1	RefSeq	gene	417807	418343	.	+	.	ID=gene386;Name=YPO0400;Dbxref=GeneID:1173245;gbkey=Gene;locus_tag=YPO0400
NC_003143.1	RefSeq	CDS	417807	418343	.	+	0	ID=cds373;Name=YP_002345477.1;Parent=gene386;Note=No significant database hits;Dbxref=UniProtKB%2FTrEMBL:Q7CG41,Genbank:YP_002345477.1,GeneID:1173245;gbkey=CDS;product=hypothetical protein;protein_id=YP_002345477.1;transl_table=11
NC_003143.1	RefSeq	gene	418345	419220	.	+	.	ID=gene387;Name=YPO0401;Dbxref=GeneID:1173246;gbkey=Gene;locus_tag=YPO0401
NC_003143.1	RefSeq	CDS	418345	419220	.	+	0	ID=cds374;Name=YP_002345478.1;Parent=gene387;Dbxref=InterPro:IPR000005,InterPro:IPR009057,InterPro:IPR012287,UniProtKB%2FTrEMBL:Q7CG42,Genbank:YP_002345478.1,GeneID:1173246;gbkey=CDS;product=transcriptional regulator;protein_id=YP_002345478.1;transl_table=11
NC_003143.1	RefSeq	region	418930	418995	.	+	.	ID=id297;Note=Predicted helix-turn-helix motif with score 1868 %28%2B5.55 SD%29 at aa 196-217%2C sequence LTRESVAHVFHISPNYLSHLFR;Dbxref=GeneID:1173246;gbkey=misc_feature
NC_003143.1	RefSeq	region	419038	419166	.	+	.	ID=id298;Note=PS00041 Bacterial regulatory proteins%2C araC family signature.;Dbxref=GeneID:1173246;gbkey=misc_feature
NC_003143.1	RefSeq	gene	419213	419557	.	-	.	ID=gene388;Name=YPO0402;Dbxref=GeneID:1173247;gbkey=Gene;locus_tag=YPO0402
NC_003143.1	RefSeq	CDS	419213	419557	.	-	0	ID=cds375;Name=YP_002345479.1;Parent=gene388;Note=FrwD with FrwB%2C FrwC and PtsA forms a PEP-dependent sugar phosphotransferase system permease which may phosphorylate and transport sugars into the cell%3B phosphorylated by EIIA%3B FrwB homolog;Dbxref=InterPro:IPR003353,InterPro:IPR013011,UniProtKB%2FTrEMBL:Q0WJQ9,Genbank:YP_002345479.1,GeneID:1173247;gbkey=CDS;product=PTS system fructose-family transporter subunit IIB;protein_id=YP_002345479.1;transl_table=11
NC_003143.1	RefSeq	gene	419650	419970	.	-	.	ID=gene389;Name=YPO0403;Dbxref=GeneID:1173248;gbkey=Gene;locus_tag=YPO0403
NC_003143.1	RefSeq	CDS	419650	419970	.	-	0	ID=cds376;Name=YP_002345480.1;Parent=gene389;Note=FrwB with FrwC%2C FrwD and PtsA forms a PEP-dependent sugar phosphotransferase system %28PTS%29 permease which may phosphorylate and transport sugars into the cell%3B cytoplasmic protein that interacts with complex EIIA%3B contains the second phosphorylation site of the PTS;Dbxref=InterPro:IPR003353,InterPro:IPR013011,UniProtKB%2FTrEMBL:Q7CG43,Genbank:YP_002345480.1,GeneID:1173248;gbkey=CDS;product=PTS system fructose family transporter subunit IIB;protein_id=YP_002345480.1;transl_table=11
NC_003143.1	RefSeq	gene	420311	421396	.	-	.	ID=gene390;Name=YPO0404;Dbxref=GeneID:1173249;gbkey=Gene;locus_tag=YPO0404
NC_003143.1	RefSeq	CDS	420311	421396	.	-	0	ID=cds377;Name=YP_002345481.1;Parent=gene390;Note=FrwC with FrwB%2C FrwD and PtsA forms a PEP-dependent sugar phosphotransferase system permease which may phosphorylate and transport sugars into the cell%3B forms translocation channel and contains the specific substrate-binding site;Dbxref=InterPro:IPR003352,InterPro:IPR006327,InterPro:IPR013014,UniProtKB%2FTrEMBL:Q7CG44,Genbank:YP_002345481.1,GeneID:1173249;gbkey=CDS;product=PTS system fructose-family transporter subunit IIC;protein_id=YP_002345481.1;transl_table=11
NC_003143.1	RefSeq	region	420539	420571	.	-	.	ID=id299;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site.;Dbxref=GeneID:1173249;gbkey=misc_feature
NC_003143.1	RefSeq	gene	421758	424316	.	+	.	ID=gene391;Name=YPO0405;Dbxref=GeneID:1173250;gbkey=Gene;locus_tag=YPO0405
NC_003143.1	RefSeq	CDS	421758	424316	.	+	0	ID=cds378;Name=YP_002345482.1;Parent=gene391;Dbxref=InterPro:IPR000032,InterPro:IPR000121,InterPro:IPR001020,InterPro:IPR002178,InterPro:IPR004715,InterPro:IPR006318,InterPro:IPR008279,InterPro:IPR008731,UniProtKB%2FTrEMBL:Q0WJQ6,Genbank:YP_002345482.1,GeneID:1173250;gbkey=CDS;product=phosphoenolpyruvate-protein phosphotransferase;protein_id=YP_002345482.1;transl_table=11
NC_003143.1	RefSeq	region	421797	421820	.	+	.	ID=id300;Note=PS00369 PTS HPR component histidine phosphorylation site signature.;Dbxref=GeneID:1173250;gbkey=misc_feature
NC_003143.1	RefSeq	region	421881	421904	.	+	.	ID=id301;Note=PS00017 ATP%2FGTP-binding site motif A %28P-loop%29.;Dbxref=GeneID:1173250;gbkey=misc_feature
NC_003143.1	RefSeq	region	422700	422735	.	+	.	ID=id302;Note=PS00370 PEP-utilizing enzymes phosphorylation site signature.;Dbxref=GeneID:1173250;gbkey=misc_feature
NC_003143.1	RefSeq	region	423489	423545	.	+	.	ID=id303;Note=PS00742 PEP-utilizing enzymes signature 2.;Dbxref=GeneID:1173250;gbkey=misc_feature
NC_003143.1	RefSeq	gene	424378	424869	.	-	.	ID=gene392;Name=YPO0406;Dbxref=GeneID:1173251;gbkey=Gene;locus_tag=YPO0406
NC_003143.1	RefSeq	CDS	424378	424869	.	-	0	ID=cds379;Name=YP_002345483.1;Parent=gene392;Dbxref=UniProtKB%2FTrEMBL:Q7CG45,Genbank:YP_002345483.1,GeneID:1173251;gbkey=CDS;product=hypothetical protein;protein_id=YP_002345483.1;transl_table=11
NC_003143.1	RefSeq	gene	425170	425460	.	-	.	ID=gene393;Name=YPO0407;Dbxref=GeneID:1173252;gbkey=Gene;locus_tag=YPO0407
NC_003143.1	RefSeq	CDS	425170	425460	.	-	0	ID=cds380;Name=YP_002345484.1;Parent=gene393;Dbxref=InterPro:IPR007138,InterPro:IPR011008,UniProtKB%2FTrEMBL:Q7CG46,Genbank:YP_002345484.1,GeneID:1173252;gbkey=CDS;product=autoinducer-2 %28AI-2%29 modifying protein LsrG;protein_id=YP_002345484.1;transl_table=11
NC_003143.1	RefSeq	gene	425524	426399	.	-	.	ID=gene394;Name=YPO0408;Dbxref=GeneID:1173253;gbkey=Gene;locus_tag=YPO0408
NC_003143.1	RefSeq	CDS	425524	426399	.	-	0	ID=cds381;Name=YP_002345485.1;Parent=gene394;Dbxref=InterPro:IPR002915,UniProtKB%2FTrEMBL:Q7CG47,Genbank:YP_002345485.1,GeneID:1173253;gbkey=CDS;product=aldolase;protein_id=YP_002345485.1;transl_table=11
NC_003143.1	RefSeq	gene	426455	427474	.	-	.	ID=gene395;Name=YPO0409;Dbxref=GeneID:1173254;gbkey=Gene;locus_tag=YPO0409
NC_003143.1	RefSeq	CDS	426455	427474	.	-	0	ID=cds382;Name=YP_002345486.1;Parent=gene395;Dbxref=UniProtKB%2FTrEMBL:Q74PW2,Genbank:YP_002345486.1,GeneID:1173254;gbkey=CDS;product=substrate-binding protein;protein_id=YP_002345486.1;transl_table=11
NC_003143.1	RefSeq	region	427382	427447	.	-	.	ID=id304;Note=1 probable transmembrane helix predicted;Dbxref=GeneID:1173254;gbkey=misc_feature
NC_003143.1	RefSeq	region	427418	427450	.	-	.	ID=id305;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site.;Dbxref=GeneID:1173254;gbkey=misc_feature
NC_003143.1	RefSeq	ribosome_entry_site	427481	427484	.	-	.	ID=id306;Note=possible RBS;gbkey=RBS
NC_003143.1	RefSeq	gene	427540	428541	.	-	.	ID=gene396;Name=YPO0410;Dbxref=GeneID:1173255;gbkey=Gene;locus_tag=YPO0410
NC_003143.1	RefSeq	CDS	427540	428541	.	-	0	ID=cds383;Name=YP_002345487.1;Parent=gene396;Dbxref=InterPro:IPR001851,UniProtKB%2FTrEMBL:Q7CG48,Genbank:YP_002345487.1,GeneID:1173255;gbkey=CDS;product=ABC transporter permease;protein_id=YP_002345487.1;transl_table=11
NC_003143.1	RefSeq	gene	428538	429593	.	-	.	ID=gene397;Name=YPO0411;Dbxref=GeneID:1173256;gbkey=Gene;locus_tag=YPO0411
NC_003143.1	RefSeq	CDS	428538	429593	.	-	0	ID=cds384;Name=YP_002345488.1;Parent=gene397;Dbxref=InterPro:IPR001851,UniProtKB%2FTrEMBL:Q7CG49,Genbank:YP_002345488.1,GeneID:1173256;gbkey=CDS;product=ABC transporter permease;protein_id=YP_002345488.1;transl_table=11
NC_003143.1	RefSeq	region	429318	429350	.	-	.	ID=id307;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site.;Dbxref=GeneID:1173256;gbkey=misc_feature
NC_003143.1	RefSeq	gene	429587	431170	.	-	.	ID=gene398;Name=YPO0412;Dbxref=GeneID:1173257;gbkey=Gene;locus_tag=YPO0412
NC_003143.1	RefSeq	CDS	429587	431170	.	-	0	ID=cds385;Name=YP_002345489.1;Parent=gene398;Dbxref=InterPro:IPR003439,InterPro:IPR003593,UniProtKB%2FTrEMBL:Q0WJP9,Genbank:YP_002345489.1,GeneID:1173257;gbkey=CDS;product=ABC transporter ATP-binding protein;protein_id=YP_002345489.1;transl_table=11
NC_003143.1	RefSeq	region	429908	429952	.	-	.	ID=id308;Note=PS00211 ABC transporters family signature.;Dbxref=GeneID:1173257;gbkey=misc_feature
NC_003143.1	RefSeq	region	431018	431041	.	-	.	ID=id309;Note=PS00017 ATP%2FGTP-binding site motif A %28P-loop%29.;Dbxref=GeneID:1173257;gbkey=misc_feature
NC_003143.1	RefSeq	gene	431515	432502	.	+	.	ID=gene399;Name=YPO0414;Dbxref=GeneID:1173259;gbkey=Gene;locus_tag=YPO0414;pseudo=true
NC_003143.1	RefSeq	gene	432673	434265	.	+	.	ID=gene400;Name=YPO0415;Dbxref=GeneID:1173260;gbkey=Gene;locus_tag=YPO0415
NC_003143.1	RefSeq	CDS	432673	434265	.	+	0	ID=cds386;Name=YP_002345491.1;Parent=gene400;Dbxref=InterPro:IPR000577,UniProtKB%2FTrEMBL:Q0WJP7,Genbank:YP_002345491.1,GeneID:1173260;gbkey=CDS;product=autoinducer-2 %28AI-2%29 kinase;protein_id=YP_002345491.1;transl_table=11
NC_003143.1	RefSeq	gene	434734	435774	.	+	.	ID=gene401;Name=YPO0416;Dbxref=GeneID:1173261;gbkey=Gene;locus_tag=YPO0416
NC_003143.1	RefSeq	CDS	434734	435774	.	+	0	ID=cds387;Name=YP_002345492.1;Parent=gene401;Dbxref=InterPro:IPR002201,InterPro:IPR011916,UniProtKB%2FTrEMBL:Q0WJP6,Genbank:YP_002345492.1,GeneID:1173261;gbkey=CDS;product=lipopolysaccharide core biosynthesis protein;protein_id=YP_002345492.1;transl_table=11
NC_003143.1	RefSeq	gene	435822	437054	.	+	.	ID=gene402;Name=YPO0417;Dbxref=GeneID:1173262;gbkey=Gene;locus_tag=YPO0417
NC_003143.1	RefSeq	CDS	435822	437054	.	+	0	ID=cds388;Name=YP_002345493.1;Parent=gene402;Dbxref=InterPro:IPR007016,UniProtKB%2FTrEMBL:Q7CG50,Genbank:YP_002345493.1,GeneID:1173262;gbkey=CDS;product=O-antigen biosynthesis protein;protein_id=YP_002345493.1;transl_table=11
NC_003143.1	RefSeq	region	437700	437768	.	+	.	ID=id310;Note=1 probable transmembrane helix predicted;gbkey=misc_feature
NC_003143.1	RefSeq	gene	437864	438097	.	+	.	ID=gene403;Name=YPO0419;Dbxref=GeneID:1173264;gbkey=Gene;locus_tag=YPO0419
NC_003143.1	RefSeq	CDS	437864	438097	.	+	0	ID=cds389;Name=YP_002345495.1;Parent=gene403;Dbxref=UniProtKB%2FTrEMBL:Q7CG51,Genbank:YP_002345495.1,GeneID:1173264;gbkey=CDS;product=hypothetical protein;protein_id=YP_002345495.1;transl_table=11
NC_003143.1	RefSeq	gene	438149	439231	.	+	.	ID=gene404;Name=YPO0420;Dbxref=GeneID:1173265;gbkey=Gene;locus_tag=YPO0420
NC_003143.1	RefSeq	CDS	438149	439231	.	+	0	ID=cds390;Name=YP_002345496.1;Parent=gene404;Dbxref=InterPro:IPR006143,UniProtKB%2FTrEMBL:Q0WJP2,Genbank:YP_002345496.1,GeneID:1173265;gbkey=CDS;product=lipoprotein;protein_id=YP_002345496.1;transl_table=11
NC_003143.1	RefSeq	region	438170	438202	.	+	.	ID=id311;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site.;Dbxref=GeneID:1173265;gbkey=misc_feature
NC_003143.1	RefSeq	gene	439231	442317	.	+	.	ID=gene405;Name=YPO0421;Dbxref=GeneID:1173266;gbkey=Gene;locus_tag=YPO0421
NC_003143.1	RefSeq	CDS	439231	442317	.	+	0	ID=cds391;Name=YP_002345497.1;Parent=gene405;Dbxref=InterPro:IPR001036,UniProtKB%2FTrEMBL:Q7CG52,Genbank:YP_002345497.1,GeneID:1173266;gbkey=CDS;product=multi-drug efflux protein;protein_id=YP_002345497.1;transl_table=11
NC_003143.1	RefSeq	gene	442678	443010	.	-	.	ID=gene406;Name=YPO0422;Dbxref=GeneID:1173267;gbkey=Gene;locus_tag=YPO0422
NC_003143.1	RefSeq	CDS	442678	443010	.	-	0	ID=cds392;Name=YP_002345498.1;Parent=gene406;Note=No significant database hits;Dbxref=UniProtKB%2FTrEMBL:Q74PX5,Genbank:YP_002345498.1,GeneID:1173267;gbkey=CDS;product=hypothetical protein;protein_id=YP_002345498.1;transl_table=11
NC_003143.1	RefSeq	gene	443813	444898	.	+	.	ID=gene407;Name=YPO0424;Dbxref=GeneID:1173269;gbkey=Gene;locus_tag=YPO0424
NC_003143.1	RefSeq	CDS	443813	444898	.	+	0	ID=cds393;Name=YP_002345500.1;Parent=gene407;Dbxref=InterPro:IPR000070,InterPro:IPR011050,UniProtKB%2FTrEMBL:Q7CG54,Genbank:YP_002345500.1,GeneID:1173269;gbkey=CDS;product=pectinesterase;protein_id=YP_002345500.1;transl_table=11
NC_003143.1	RefSeq	gene	445439	446611	.	-	.	ID=gene408;Name=hmsT;Dbxref=GeneID:1173270;gbkey=Gene;gene=hmsT;locus_tag=YPO0425
NC_003143.1	RefSeq	CDS	445439	446611	.	-	0	ID=cds394;Name=YP_002345501.1;Parent=gene408;Dbxref=InterPro:IPR000160,UniProtKB%2FTrEMBL:Q9X5X6,Genbank:YP_002345501.1,GeneID:1173270;gbkey=CDS;gene=hmsT;product=HmsT protein;protein_id=YP_002345501.1;transl_table=11
NC_003143.1	RefSeq	gene	446860	447192	.	+	.	ID=gene409;Name=YPO0426;Dbxref=GeneID:1173271;gbkey=Gene;locus_tag=YPO0426
NC_003143.1	RefSeq	CDS	446860	447192	.	+	0	ID=cds395;Name=YP_002345502.2;Parent=gene409;Dbxref=InterPro:IPR009885,UniProtKB%2FTrEMBL:Q0WJN6,Genbank:YP_002345502.2,GeneID:1173271;gbkey=CDS;product=hypothetical protein;protein_id=YP_002345502.2;transl_table=11
NC_003143.1	RefSeq	gene	447362	447448	.	-	.	ID=gene410;Name=YPt_04;Dbxref=GeneID:1173272;gbkey=Gene;locus_tag=YPt_04
NC_003143.1	RefSeq	tRNA	447362	447448	.	-	.	ID=rna7;Parent=gene410;Note=tRNA Leu anticodon CAG%2C Cove score 64.60;Dbxref=GeneID:1173272;gbkey=tRNA;product=tRNA-Leu
NC_003143.1	RefSeq	exon	447362	447448	.	-	.	ID=id312;Parent=rna7;Note=tRNA Leu anticodon CAG%2C Cove score 64.60;Dbxref=GeneID:1173272;gbkey=tRNA;product=tRNA-Leu
NC_003143.1	RefSeq	gene	447705	448748	.	-	.	ID=gene411;Name=rsmC;Dbxref=GeneID:1173273;gbkey=Gene;gene=rsmC;locus_tag=YPO0427
NC_003143.1	RefSeq	CDS	447705	448748	.	-	0	ID=cds396;Name=YP_002345503.1;Parent=gene411;Note=16S rRNA M2G1207 methyltransferase%3B one of many enzymes that modify bases of the ribosomal RNA%3B this enzyme methylates the G at position 1207 of the small ribosomal subunit;Dbxref=InterPro:IPR002052,InterPro:IPR007848,InterPro:IPR013675,UniProtKB%2FTrEMBL:Q7CG56,Genbank:YP_002345503.1,GeneID:1173273;gbkey=CDS;gene=rsmC;product=16S ribosomal RNA m2G1207 methyltransferase;protein_id=YP_002345503.1;transl_table=11
NC_003143.1	RefSeq	region	447936	447956	.	-	.	ID=id313;Note=PS00092 N-6 Adenine-specific DNA methylases signature.;Dbxref=GeneID:1173273;gbkey=misc_feature;gene=rsmC
NC_003143.1	RefSeq	gene	448861	449298	.	+	.	ID=gene412;Name=holD;Dbxref=GeneID:1173274;gbkey=Gene;gene=holD;locus_tag=YPO0428
NC_003143.1	RefSeq	CDS	448861	449298	.	+	0	ID=cds397;Name=YP_002345504.1;Parent=gene412;Note=with the chi subunit binds to single-strand binding %28SSB%29 protein and acts as a bridge between the DnaX clamp loader complex and the SSB;Dbxref=InterPro:IPR004615,UniProtKB%2FTrEMBL:Q7CG57,Genbank:YP_002345504.1,GeneID:1173274;gbkey=CDS;gene=holD;product=DNA polymerase III subunit psi;protein_id=YP_002345504.1;transl_table=11
NC_003143.1	RefSeq	gene	449243	449686	.	+	.	ID=gene413;Name=rimI;Dbxref=GeneID:1173275;gbkey=Gene;gene=rimI;locus_tag=YPO0429
NC_003143.1	RefSeq	CDS	449243	449686	.	+	0	ID=cds398;Name=YP_002345505.1;Parent=gene413;Note=alanine acetyltransferase that specifically acetylates ribosomal protein S18;Dbxref=InterPro:IPR000182,InterPro:IPR006464,UniProtKB%2FTrEMBL:Q0WJN3,Genbank:YP_002345505.1,GeneID:1173275;gbkey=CDS;gene=rimI;product=ribosomal-protein-alanine N-acetyltransferase;protein_id=YP_002345505.1;transl_table=11
NC_003143.1	RefSeq	gene	449865	451454	.	+	.	ID=gene414;Name=prfC;Dbxref=GeneID:1173276;gbkey=Gene;gene=prfC;gene_synonym=miaD,prfC,tos;locus_tag=YPO0430
NC_003143.1	RefSeq	CDS	449865	451454	.	+	0	ID=cds399;Name=YP_002345506.1;Parent=gene414;Note=stimulates the release of release factors 1 and 2 from the ribosome after hydrolysis of the ester bond in peptidyl-tRNA has occurred%3B GDP%2FGTP-binding protein;Dbxref=InterPro:IPR000795,InterPro:IPR004161,InterPro:IPR004548,InterPro:IPR005225,InterPro:IPR009000,InterPro:IPR009022,UniProtKB%2FTrEMBL:Q0WJN2,Genbank:YP_002345506.1,GeneID:1173276;gbkey=CDS;gene=prfC;product=peptide chain release factor 3;protein_id=YP_002345506.1;transl_table=11
NC_003143.1	RefSeq	region	450036	450083	.	+	.	ID=id314;Note=PS00301 GTP-binding elongation factors signature.;Dbxref=GeneID:1173276;gbkey=misc_feature;gene=prfC
NC_003143.1	RefSeq	gene	451781	452395	.	+	.	ID=gene415;Name=osmY;Dbxref=GeneID:1173277;gbkey=Gene;gene=osmY;locus_tag=YPO0431
NC_003143.1	RefSeq	CDS	451781	452395	.	+	0	ID=cds400;Name=YP_002345507.1;Parent=gene415;Dbxref=InterPro:IPR007055,InterPro:IPR014004,UniProtKB%2FTrEMBL:Q7CG58,Genbank:YP_002345507.1,GeneID:1173277;gbkey=CDS;gene=osmY;product=hypothetical protein;protein_id=YP_002345507.1;transl_table=11
NC_003143.1	RefSeq	gene	452562	452723	.	+	.	ID=gene416;Name=YPO0432;Dbxref=GeneID:1173278;gbkey=Gene;locus_tag=YPO0432
NC_003143.1	RefSeq	CDS	452562	452723	.	+	0	ID=cds401;Name=YP_002345508.1;Parent=gene416;Dbxref=InterPro:IPR009760,UniProtKB%2FSwiss-Prot:Q7CG59,UniProtKB%2FTrEMBL:Q7CG59,Genbank:YP_002345508.1,GeneID:1173278;gbkey=CDS;product=hypothetical protein;protein_id=YP_002345508.1;transl_table=11
NC_003143.1	RefSeq	gene	452797	454068	.	+	.	ID=gene417;Name=YPO0433;Dbxref=GeneID:1173279;gbkey=Gene;locus_tag=YPO0433
NC_003143.1	RefSeq	CDS	452797	454068	.	+	0	ID=cds402;Name=YP_002345509.1;Parent=gene417;Dbxref=InterPro:IPR002641,UniProtKB%2FTrEMBL:Q7CG60,Genbank:YP_002345509.1,GeneID:1173279;gbkey=CDS;product=hypothetical protein;protein_id=YP_002345509.1;transl_table=11
NC_003143.1	RefSeq	gene	454105	454893	.	+	.	ID=gene418;Name=YPO0434;Dbxref=GeneID:1173280;gbkey=Gene;locus_tag=YPO0434
NC_003143.1	RefSeq	CDS	454105	454893	.	+	0	ID=cds403;Name=YP_002345510.1;Parent=gene418;Dbxref=InterPro:IPR001130,InterPro:IPR012278,UniProtKB%2FTrEMBL:Q0WJM8,Genbank:YP_002345510.1,GeneID:1173280;gbkey=CDS;product=metalloenzyme;protein_id=YP_002345510.1;transl_table=11
NC_003143.1	RefSeq	region	454114	454140	.	+	.	ID=id315;Note=PS01137 Uncharacterized protein family UPF0006 signature 1.;Dbxref=GeneID:1173280;gbkey=misc_feature
NC_003143.1	RefSeq	gene	455428	456699	.	+	.	ID=gene419;Name=YPO0435;Dbxref=GeneID:1173281;gbkey=Gene;locus_tag=YPO0435
NC_003143.1	RefSeq	CDS	455428	456699	.	+	0	ID=cds404;Name=YP_002345511.1;Parent=gene419;Dbxref=InterPro:IPR002668,InterPro:IPR008276,InterPro:IPR011642,InterPro:IPR011657,UniProtKB%2FTrEMBL:Q0WJM7,Genbank:YP_002345511.1,GeneID:1173281;gbkey=CDS;product=Na%2B dependent nucleoside transporter family protein;protein_id=YP_002345511.1;transl_table=11
NC_003143.1	RefSeq	gene	457275	458072	.	+	.	ID=gene420;Name=deoC;Dbxref=GeneID:1173282;gbkey=Gene;gene=deoC;gene_synonym=dra,thyR;locus_tag=YPO0436
NC_003143.1	RefSeq	CDS	457275	458072	.	+	0	ID=cds405;Name=YP_002345512.1;Parent=gene420;Note=catalyzes the formation of D-glyceraldehyde 3-phosphate and acetaldehyde from 2-deoxy-D-ribose-5-phosphate;Dbxref=InterPro:IPR002915,InterPro:IPR011343,UniProtKB%2FTrEMBL:Q0WJM6,Genbank:YP_002345512.1,GeneID:1173282;gbkey=CDS;gene=deoC;product=deoxyribose-phosphate aldolase;protein_id=YP_002345512.1;transl_table=11
NC_003143.1	RefSeq	gene	458193	459511	.	+	.	ID=gene421;Name=deoA;Dbxref=GeneID:1173283;gbkey=Gene;gene=deoA;gene_synonym=tpp,ttg;locus_tag=YPO0437;pseudo=true
NC_003143.1	RefSeq	region	458529	458576	.	+	.	ID=id316;Note=PS00647 Thymidine and pyrimidine-nucleoside phosphorylases signature.;Dbxref=GeneID:1173283;gbkey=misc_feature;gene=deoA
NC_003143.1	RefSeq	gene	459643	460866	.	+	.	ID=gene422;Name=deoB;Dbxref=GeneID:1173284;gbkey=Gene;gene=deoB;gene_synonym=drm,thyR;locus_tag=YPO0439
NC_003143.1	RefSeq	CDS	459643	460866	.	+	0	ID=cds406;Name=YP_002345513.1;Parent=gene422;Note=catalyzes the transfer of phosphate between the C1 and C5 carbons of pentose;Dbxref=InterPro:IPR006124,InterPro:IPR010045,InterPro:IPR013553,UniProtKB%2FTrEMBL:Q0WJM5,Genbank:YP_002345513.1,GeneID:1173284;gbkey=CDS;gene=deoB;product=phosphopentomutase;protein_id=YP_002345513.1;transl_table=11
NC_003143.1	RefSeq	gene	460991	461710	.	+	.	ID=gene423;Name=deoD;Dbxref=GeneID:1173285;gbkey=Gene;gene=deoD;gene_synonym=pup;locus_tag=YPO0440
NC_003143.1	RefSeq	CDS	460991	461710	.	+	0	ID=cds407;Name=YP_002345514.1;Parent=gene423;Note=catalyzes the reversible phosphorolysis of ribonucleosides and 2%27- deoxyribonucleosides to the free base and %282%27-deoxy%29ribose-1- phosphate;Dbxref=InterPro:IPR000845,InterPro:IPR004402,UniProtKB%2FTrEMBL:Q0WJM4,Genbank:YP_002345514.1,GeneID:1173285;gbkey=CDS;gene=deoD;product=purine nucleoside phosphorylase;protein_id=YP_002345514.1;transl_table=11
NC_003143.1	RefSeq	region	461174	461221	.	+	.	ID=id317;Note=PS01232 Purine and other phosphorylases family 1 signature.;Dbxref=GeneID:1173285;gbkey=misc_feature;gene=deoD
NC_003143.1	RefSeq	gene	461822	462523	.	-	.	ID=gene424;Name=smp;Dbxref=GeneID:1173286;gbkey=Gene;gene=smp;locus_tag=YPO0441
NC_003143.1	RefSeq	CDS	461822	462523	.	-	0	ID=cds408;Name=YP_002345515.1;Parent=gene424;Dbxref=UniProtKB%2FTrEMBL:Q0WJM3,Genbank:YP_002345515.1,GeneID:1173286;gbkey=CDS;gene=smp;product=hypothetical protein;protein_id=YP_002345515.1;transl_table=11
NC_003143.1	RefSeq	gene	462755	463735	.	+	.	ID=gene425;Name=serB;Dbxref=GeneID:1173287;gbkey=Gene;gene=serB;locus_tag=YPO0442
NC_003143.1	RefSeq	CDS	462755	463735	.	+	0	ID=cds409;Name=YP_002345516.1;Parent=gene425;Note=catalyzes the formation of serine from O-phosphoserine;Dbxref=InterPro:IPR004469,InterPro:IPR005834,InterPro:IPR006383,UniProtKB%2FTrEMBL:Q7CG61,Genbank:YP_002345516.1,GeneID:1173287;gbkey=CDS;gene=serB;product=phosphoserine phosphatase;protein_id=YP_002345516.1;transl_table=11
NC_003143.1	RefSeq	gene	463823	465205	.	+	.	ID=gene426;Name=radA;Dbxref=GeneID:1173288;gbkey=Gene;gene=radA;gene_synonym=sms;locus_tag=YPO0443
NC_003143.1	RefSeq	CDS	463823	465205	.	+	0	ID=cds410;Name=YP_002345517.1;Parent=gene426;Note=Sms%3B stabilizes the strand-invasion intermediate during the DNA repair%3B involved in recombination of donor DNA and plays an important role in DNA damage repair after exposure to mutagenic agents;Dbxref=InterPro:IPR001553,InterPro:IPR001984,InterPro:IPR003593,InterPro:IPR004504,UniProtKB%2FTrEMBL:Q7CG62,Genbank:YP_002345517.1,GeneID:1173288;gbkey=CDS;gene=radA;product=DNA repair protein RadA;protein_id=YP_002345517.1;transl_table=11
NC_003143.1	RefSeq	region	464126	464149	.	+	.	ID=id318;Note=PS00017 ATP%2FGTP-binding site motif A %28P-loop%29.;Dbxref=GeneID:1173288;gbkey=misc_feature;gene=radA
NC_003143.1	RefSeq	gene	465364	466635	.	+	.	ID=gene427;Name=nadR;Dbxref=GeneID:1173289;gbkey=Gene;gene=nadR;gene_synonym=nadI,nadR,pnuA;locus_tag=YPO0444
NC_003143.1	RefSeq	CDS	465364	466635	.	+	0	ID=cds411;Name=YP_002345518.1;Parent=gene427;Note=catalyzes the formation of NAD%28%2B%29 from nicotinamide ribonucleotide;Dbxref=InterPro:IPR001387,InterPro:IPR002086,InterPro:IPR004820,InterPro:IPR004821,InterPro:IPR006417,InterPro:IPR010982,UniProtKB%2FTrEMBL:Q74PZ2,Genbank:YP_002345518.1,GeneID:1173289;gbkey=CDS;gene=nadR;product=nicotinamide-nucleotide adenylyltransferase;protein_id=YP_002345518.1;transl_table=11
NC_003143.1	RefSeq	region	465409	465474	.	+	.	ID=id319;Note=Predicted helix-turn-helix motif with score 1872 %28%2B5.56 SD%29 at aa 16-37%2C sequence CTLQQVAEASGMTKGYLSQLLN;Dbxref=GeneID:1173289;gbkey=misc_feature;gene=nadR
NC_003143.1	RefSeq	region	466075	466098	.	+	.	ID=id320;Note=PS00017 ATP%2FGTP-binding site motif A %28P-loop%29.;Dbxref=GeneID:1173289;gbkey=misc_feature;gene=nadR
NC_003143.1	RefSeq	region	466078	466101	.	+	.	ID=id321;Note=PS00687 Aldehyde dehydrogenases glutamic acid active site.;Dbxref=GeneID:1173289;gbkey=misc_feature;gene=nadR
NC_003143.1	RefSeq	gene	466792	467922	.	+	.	ID=gene428;Name=YPO0445;Dbxref=GeneID:1173290;gbkey=Gene;locus_tag=YPO0445
NC_003143.1	RefSeq	CDS	466792	467922	.	+	0	ID=cds412;Name=YP_002345519.1;Parent=gene428;Dbxref=InterPro:IPR003812,UniProtKB%2FTrEMBL:Q0WJL9,Genbank:YP_002345519.1,GeneID:1173290;gbkey=CDS;product=hypothetical protein;protein_id=YP_002345519.1;transl_table=11
NC_003143.1	RefSeq	gene	468068	469731	.	-	.	ID=gene429;Name=yjjK;Dbxref=GeneID:1173291;gbkey=Gene;gene=yjjK;gene_synonym=yjjK;locus_tag=YPO0446;pseudo=true
NC_003143.1	RefSeq	region	468647	468670	.	-	.	ID=id322;Note=PS00017 ATP%2FGTP-binding site motif A %28P-loop%29.;Dbxref=GeneID:1173291;gbkey=misc_feature;gene=yjjK
NC_003143.1	RefSeq	region	469201	469245	.	-	.	ID=id323;Note=PS00211 ABC transporters family signature.;Dbxref=GeneID:1173291;gbkey=misc_feature;gene=yjjK
NC_003143.1	RefSeq	region	469594	469617	.	-	.	ID=id324;Note=PS00017 ATP%2FGTP-binding site motif A %28P-loop%29.;Dbxref=GeneID:1173291;gbkey=misc_feature;gene=yjjK
NC_003143.1	RefSeq	gene	469914	470420	.	-	.	ID=gene430;Name=YPO0448;Dbxref=GeneID:1173292;gbkey=Gene;locus_tag=YPO0448
NC_003143.1	RefSeq	CDS	469914	470420	.	-	0	ID=cds413;Name=YP_002345520.1;Parent=gene430;Dbxref=InterPro:IPR006664,InterPro:IPR006665,UniProtKB%2FTrEMBL:Q7CG64,Genbank:YP_002345520.1,GeneID:1173292;gbkey=CDS;product=lipoprotein;protein_id=YP_002345520.1;transl_table=11
NC_003143.1	RefSeq	region	470337	470369	.	-	.	ID=id325;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site.;Dbxref=GeneID:1173292;gbkey=misc_feature
NC_003143.1	RefSeq	gene	470426	471703	.	-	.	ID=gene431;Name=YPO0449;Dbxref=GeneID:1173293;gbkey=Gene;locus_tag=YPO0449
NC_003143.1	RefSeq	CDS	470426	471703	.	-	0	ID=cds414;Name=YP_002345521.1;Parent=gene431;Dbxref=InterPro:IPR000160,InterPro:IPR003660,UniProtKB%2FTrEMBL:Q7CG65,Genbank:YP_002345521.1,GeneID:1173293;gbkey=CDS;product=hypothetical protein;protein_id=YP_002345521.1;transl_table=11
NC_003143.1	RefSeq	region	471596	471628	.	-	.	ID=id326;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site.;Dbxref=GeneID:1173293;gbkey=misc_feature
NC_003143.1	RefSeq	gene	471724	472347	.	-	.	ID=gene432;Name=YPO0450;Dbxref=GeneID:1173294;gbkey=Gene;locus_tag=YPO0450
NC_003143.1	RefSeq	CDS	471724	472347	.	-	0	ID=cds415;Name=YP_002345522.1;Parent=gene432;Dbxref=UniProtKB%2FTrEMBL:Q7CG66,Genbank:YP_002345522.1,GeneID:1173294;gbkey=CDS;product=hypothetical protein;protein_id=YP_002345522.1;transl_table=11
NC_003143.1	RefSeq	region	472198	472263	.	-	.	ID=id327;Note=1 probable transmembrane helix predicted;Dbxref=GeneID:1173294;gbkey=misc_feature
NC_003143.1	RefSeq	gene	472722	475448	.	-	.	ID=gene433;Name=YPO0451;Dbxref=GeneID:1173295;gbkey=Gene;locus_tag=YPO0451
NC_003143.1	RefSeq	CDS	472722	475448	.	-	0	ID=cds416;Name=YP_002345523.1;Parent=gene433;Dbxref=InterPro:IPR000695,InterPro:IPR001757,InterPro:IPR004014,InterPro:IPR005834,InterPro:IPR006068,InterPro:IPR008250,UniProtKB%2FTrEMBL:Q7CG67,Genbank:YP_002345523.1,GeneID:1173295;gbkey=CDS;product=cation-transporting P-type ATPase;protein_id=YP_002345523.1;transl_table=11
NC_003143.1	RefSeq	region	474408	474428	.	-	.	ID=id328;Note=PS00154 E1-E2 ATPases phosphorylation site.;Dbxref=GeneID:1173295;gbkey=misc_feature
NC_003143.1	RefSeq	gene	476018	477937	.	+	.	ID=gene434;Name=slt;Dbxref=GeneID:1173296;gbkey=Gene;gene=slt;gene_synonym=sltY;locus_tag=YPO0452
NC_003143.1	RefSeq	CDS	476018	477937	.	+	0	ID=cds417;Name=YP_002345524.1;Parent=gene434;Note=catalyzes the cleavage of the glycosidic bonds between N-acetylmuramic acid and N-acetylglucosamine residues in peptidoglycan;Dbxref=InterPro:IPR000189,InterPro:IPR000712,InterPro:IPR008258,InterPro:IPR008939,InterPro:IPR012289,UniProtKB%2FTrEMBL:Q0WJL4,Genbank:YP_002345524.1,GeneID:1173296;gbkey=CDS;gene=slt;product=lytic murein transglycosylase;protein_id=YP_002345524.1;transl_table=11
NC_003143.1	RefSeq	region	477500	477586	.	+	.	ID=id329;Note=PS00922 Prokaryotic transglycosylases signature.;Dbxref=GeneID:1173296;gbkey=misc_feature;gene=slt
NC_003143.1	RefSeq	region	477764	477799	.	+	.	ID=id330;Note=PS01258 Apoptosis regulator%2C Bcl-2 family BH2 domain signature.;Dbxref=GeneID:1173296;gbkey=misc_feature;gene=slt
NC_003143.1	RefSeq	gene	478188	478565	.	+	.	ID=gene435;Name=trpR;Dbxref=GeneID:1173297;gbkey=Gene;gene=trpR;locus_tag=YPO0453
NC_003143.1	RefSeq	CDS	478188	478565	.	+	0	ID=cds418;Name=YP_002345525.1;Parent=gene435;Note=When complexed with L-tryptophan it binds the operator region of the trp operon and prevents the initiation of transcription;Dbxref=InterPro:IPR000831,InterPro:IPR010921,InterPro:IPR013318,InterPro:IPR013335,UniProtKB%2FTrEMBL:Q0WJL3,Genbank:YP_002345525.1,GeneID:1173297;gbkey=CDS;gene=trpR;product=Trp operon repressor;protein_id=YP_002345525.1;transl_table=11
NC_003143.1	RefSeq	gene	478562	479104	.	-	.	ID=gene436;Name=trpR;Dbxref=GeneID:1173298;gbkey=Gene;gene=trpR;locus_tag=YPO0454
NC_003143.1	RefSeq	CDS	478562	479104	.	-	0	ID=cds419;Name=YP_002345526.1;Parent=gene436;Note=pyrophosphatase%3B has activity against dUTP and dITP%3B the crystal structure of the Vibrio protein showed similarity to Methanococcus janaschii Mj0226%3B in Vibrio cholerae this gene is part of the Mba operon that is involved in regulation and maintenance of biofilms%3B in Escherichia coli overexpression of this gene leads to resistance to an HMP analog;Dbxref=InterPro:IPR002786,UniProtKB%2FTrEMBL:Q0WJL2,Genbank:YP_002345526.1,GeneID:1173298;gbkey=CDS;product=NTPase;protein_id=YP_002345526.1;transl_table=11
NC_003143.1	RefSeq	gene	479198	479845	.	+	.	ID=gene437;Name=gpmB;Dbxref=GeneID:1173299;gbkey=Gene;gene=gpmB;locus_tag=YPO0455
NC_003143.1	RefSeq	CDS	479198	479845	.	+	0	ID=cds420;Name=YP_002345527.1;Parent=gene437;Note=catalyzes reactions involving the transfer of phospho groups between the three carbon atoms of phosphoglycerate;Dbxref=InterPro:IPR001345,InterPro:IPR013078,UniProtKB%2FTrEMBL:Q0WJL1,Genbank:YP_002345527.1,GeneID:1173299;gbkey=CDS;gene=gpmB;product=phosphoglycerate mutase;protein_id=YP_002345527.1;transl_table=11
NC_003143.1	RefSeq	region	479213	479242	.	+	.	ID=id331;Note=PS00175 Phosphoglycerate mutase family phosphohistidine signature.;Dbxref=GeneID:1173299;gbkey=misc_feature;gene=gpmB
NC_003143.1	RefSeq	gene	479842	480708	.	-	.	ID=gene438;Name=rob;Dbxref=GeneID:1173300;gbkey=Gene;gene=rob;locus_tag=YPO0456
NC_003143.1	RefSeq	CDS	479842	480708	.	-	0	ID=cds421;Name=YP_002345528.1;Parent=gene438;Dbxref=InterPro:IPR000005,InterPro:IPR009057,InterPro:IPR010499,InterPro:IPR011256,InterPro:IPR012287,UniProtKB%2FTrEMBL:Q7CG68,Genbank:YP_002345528.1,GeneID:1173300;gbkey=CDS;gene=rob;product=right origin-binding protein;protein_id=YP_002345528.1;transl_table=11
NC_003143.1	RefSeq	region	480409	480546	.	-	.	ID=id332;Note=PS00041 Bacterial regulatory proteins%2C araC family signature.;Dbxref=GeneID:1173300;gbkey=misc_feature;gene=rob
NC_003143.1	RefSeq	gene	480934	481401	.	+	.	ID=gene439;Name=creA;Dbxref=GeneID:1173301;gbkey=Gene;gene=creA;locus_tag=YPO0457
NC_003143.1	RefSeq	CDS	480934	481401	.	+	0	ID=cds422;Name=YP_002345529.1;Parent=gene439;Dbxref=InterPro:IPR010292,UniProtKB%2FTrEMBL:Q7CG69,Genbank:YP_002345529.1,GeneID:1173301;gbkey=CDS;gene=creA;product=hypothetical protein;protein_id=YP_002345529.1;transl_table=11
NC_003143.1	RefSeq	gene	481575	482291	.	-	.	ID=gene440;Name=arcA;Dbxref=GeneID:1173302;gbkey=Gene;gene=arcA;gene_synonym=cpxC,dye,fexA,msp,seg,sfrA;locus_tag=YPO0458
NC_003143.1	RefSeq	CDS	481575	482291	.	-	0	ID=cds423;Name=YP_002345530.1;Parent=gene440;Dbxref=InterPro:IPR001789,InterPro:IPR001867,InterPro:IPR011006,InterPro:IPR011991,UniProtKB%2FTrEMBL:Q7CG70,Genbank:YP_002345530.1,GeneID:1173302;gbkey=CDS;gene=arcA;product=two-component response regulator;protein_id=YP_002345530.1;transl_table=11
NC_003143.1	RefSeq	gene	483395	485854	.	+	.	ID=gene441;Name=thrA;Dbxref=GeneID:1173303;gbkey=Gene;gene=thrA;gene_synonym=thrA1,thrA2;locus_tag=YPO0459
NC_003143.1	RefSeq	CDS	483395	485854	.	+	0	ID=cds424;Name=YP_002345531.1;Parent=gene441;Note=multifunctional homotetrameric enzyme that catalyzes the phosphorylation of aspartate to form aspartyl-4-phosphate as well as conversion of aspartate semialdehyde to homoserine%3B functions in a number of amino acid biosynthetic pathways;Dbxref=InterPro:IPR001048,InterPro:IPR001341,InterPro:IPR001342,InterPro:IPR002912,InterPro:IPR005106,InterPro:IPR011147,UniProtKB%2FTrEMBL:Q0WJK7,Genbank:YP_002345531.1,GeneID:1173303;gbkey=CDS;gene=thrA;product=bifunctional aspartokinase I%2Fhomoserine dehydrogenase I;protein_id=YP_002345531.1;transl_table=11
NC_003143.1	RefSeq	region	483401	483427	.	+	.	ID=id333;Note=PS00324 Aspartokinase signature.;Dbxref=GeneID:1173303;gbkey=misc_feature;gene=thrA
NC_003143.1	RefSeq	region	485372	485440	.	+	.	ID=id334;Note=PS01042 Homoserine dehydrogenase signature.;Dbxref=GeneID:1173303;gbkey=misc_feature;gene=thrA
NC_003143.1	RefSeq	gene	485857	486786	.	+	.	ID=gene442;Name=thrB;Dbxref=GeneID:1173304;gbkey=Gene;gene=thrB;locus_tag=YPO0460
NC_003143.1	RefSeq	CDS	485857	486786	.	+	0	ID=cds425;Name=YP_002345532.1;Parent=gene442;Note=catalyzes the formation of O-phospho-L-homoserine from L-homoserine in threonine biosynthesis from asparate;Dbxref=InterPro:IPR000870,InterPro:IPR006203,InterPro:IPR006204,InterPro:IPR013750,UniProtKB%2FTrEMBL:Q0WJK6,Genbank:YP_002345532.1,GeneID:1173304;gbkey=CDS;gene=thrB;product=homoserine kinase;protein_id=YP_002345532.1;transl_table=11
NC_003143.1	RefSeq	region	486124	486159	.	+	.	ID=id335;Note=PS00627 GHMP kinases  ATP-binding domain.;Dbxref=GeneID:1173304;gbkey=misc_feature;gene=thrB
NC_003143.1	RefSeq	region	486127	486159	.	+	.	ID=id336;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site.;Dbxref=GeneID:1173304;gbkey=misc_feature;gene=thrB
NC_003143.1	RefSeq	gene	486790	488079	.	+	.	ID=gene443;Name=thrC;Dbxref=GeneID:1173305;gbkey=Gene;gene=thrC;locus_tag=YPO0461
NC_003143.1	RefSeq	CDS	486790	488079	.	+	0	ID=cds426;Name=YP_002345533.1;Parent=gene443;Note=catalyzes the formation of L-threonine from O-phospho-L-homoserine;Dbxref=InterPro:IPR000634,InterPro:IPR001926,InterPro:IPR004450,UniProtKB%2FTrEMBL:Q7CG71,Genbank:YP_002345533.1,GeneID:1173305;gbkey=CDS;gene=thrC;product=threonine synthase;protein_id=YP_002345533.1;transl_table=11
NC_003143.1	RefSeq	region	487078	487122	.	+	.	ID=id337;Note=PS00165 Serine%2Fthreonine dehydratases pyridoxal-phosphate attachment site.;Dbxref=GeneID:1173305;gbkey=misc_feature;gene=thrC
NC_003143.1	RefSeq	gene	488896	489672	.	-	.	ID=gene444;Name=YPO0462;Dbxref=GeneID:1173306;gbkey=Gene;locus_tag=YPO0462
NC_003143.1	RefSeq	CDS	488896	489672	.	-	0	ID=cds427;Name=YP_002345534.1;Parent=gene444;Dbxref=InterPro:IPR005583,UniProtKB%2FTrEMBL:Q0WJK4,Genbank:YP_002345534.1,GeneID:1173306;gbkey=CDS;product=hypothetical protein;protein_id=YP_002345534.1;transl_table=11
NC_003143.1	RefSeq	region	489388	489435	.	-	.	ID=id338;Note=PS00225 Crystallins beta and gamma %27Greek key%27 motif signature.;Dbxref=GeneID:1173306;gbkey=misc_feature
NC_003143.1	RefSeq	gene	490204	491157	.	+	.	ID=gene445;Name=talB;Dbxref=GeneID:1173307;gbkey=Gene;gene=talB;locus_tag=YPO0463
NC_003143.1	RefSeq	CDS	490204	491157	.	+	0	ID=cds428;Name=YP_002345535.1;Parent=gene445;Dbxref=InterPro:IPR001585,InterPro:IPR004730,InterPro:IPR013785,UniProtKB%2FTrEMBL:Q0WJK3,Genbank:YP_002345535.1,GeneID:1173307;gbkey=CDS;gene=talB;product=transaldolase B;protein_id=YP_002345535.1;transl_table=11
NC_003143.1	RefSeq	region	490294	490320	.	+	.	ID=id339;Note=PS01054 Transaldolase signature 1.;Dbxref=GeneID:1173307;gbkey=misc_feature;gene=talB
NC_003143.1	RefSeq	region	490588	490641	.	+	.	ID=id340;Note=PS00958 Transaldolase active site.;Dbxref=GeneID:1173307;gbkey=misc_feature;gene=talB
NC_003143.1	RefSeq	gene	491445	492032	.	+	.	ID=gene446;Name=mogA;Dbxref=GeneID:1173308;gbkey=Gene;gene=mogA;gene_synonym=mog,mogA;locus_tag=YPO0464
NC_003143.1	RefSeq	CDS	491445	492032	.	+	0	ID=cds429;Name=YP_002345536.1;Parent=gene446;Note=forms a trimer%3B related to eukaryotic protein gephyrin%3B functions during molybdenum cofactor biosynthesis;Dbxref=InterPro:IPR001453,InterPro:IPR008284,InterPro:IPR012119,UniProtKB%2FTrEMBL:Q7CG72,Genbank:YP_002345536.1,GeneID:1173308;gbkey=CDS;gene=mogA;product=molybdenum cofactor biosynthesis protein MogA;protein_id=YP_002345536.1;transl_table=11
NC_003143.1	RefSeq	region	491649	491690	.	+	.	ID=id341;Note=PS01078 Molybdenum cofactor biosynthesis proteins signature 1.;Dbxref=GeneID:1173308;gbkey=misc_feature;gene=mogA
NC_003143.1	RefSeq	gene	492160	493548	.	+	.	ID=gene447;Name=YPO0465;Dbxref=GeneID:1173309;gbkey=Gene;locus_tag=YPO0465
NC_003143.1	RefSeq	CDS	492160	493548	.	+	0	ID=cds430;Name=YP_002345537.1;Parent=gene447;Dbxref=InterPro:IPR007114,InterPro:IPR011701,UniProtKB%2FTrEMBL:Q7CG73,Genbank:YP_002345537.1,GeneID:1173309;gbkey=CDS;product=transport protein;protein_id=YP_002345537.1;transl_table=11
NC_003143.1	RefSeq	gene	493618	496065	.	-	.	ID=gene448;Name=YPO0466;Dbxref=GeneID:1173310;gbkey=Gene;locus_tag=YPO0466
NC_003143.1	RefSeq	CDS	493618	496065	.	-	0	ID=cds431;Name=YP_002345538.1;Parent=gene448;Note=No significant database matches. CDS DNA contains low GC content%2C 35.33%25;Dbxref=InterPro:IPR000182,InterPro:IPR001064,InterPro:IPR011024,UniProtKB%2FTrEMBL:Q7CG74,Genbank:YP_002345538.1,GeneID:1173310;gbkey=CDS;product=hypothetical protein;protein_id=YP_002345538.1;transl_table=11
NC_003143.1	RefSeq	gene	496354	496965	.	-	.	ID=gene449;Name=yaaH;Dbxref=GeneID:1173311;gbkey=Gene;gene=yaaH;locus_tag=YPO0467
NC_003143.1	RefSeq	CDS	496354	496965	.	-	0	ID=cds432;Name=YP_002345539.1;Parent=gene449;Dbxref=InterPro:IPR000791,UniProtKB%2FTrEMBL:Q7CG75,Genbank:YP_002345539.1,GeneID:1173311;gbkey=CDS;gene=yaaH;product=hypothetical protein;protein_id=YP_002345539.1;transl_table=11
NC_003143.1	RefSeq	gene	497339	499249	.	+	.	ID=gene450;Name=dnaK;Dbxref=GeneID:1173312;gbkey=Gene;gene=dnaK;gene_synonym=groP,grpF,seg;locus_tag=YPO0468
NC_003143.1	RefSeq	CDS	497339	499249	.	+	0	ID=cds433;Name=YP_002345540.1;Parent=gene450;Note=heat shock protein 70%3B assists in folding of nascent polypeptide chains%3B refolding of misfolded proteins%3B utilizes ATPase activity to help fold%3B co-chaperones are DnaJ and GrpE%3B multiple copies in some bacteria;Dbxref=InterPro:IPR001023,InterPro:IPR002876,InterPro:IPR012725,InterPro:IPR013126,UniProtKB%2FTrEMBL:Q0WJJ8,Genbank:YP_002345540.1,GeneID:1173312;gbkey=CDS;gene=dnaK;product=molecular chaperone DnaK;protein_id=YP_002345540.1;transl_table=11
NC_003143.1	RefSeq	region	497357	497380	.	+	.	ID=id342;Note=PS00297 Heat shock hsp70 proteins family signature 1.;Dbxref=GeneID:1173312;gbkey=misc_feature;gene=dnaK
NC_003143.1	RefSeq	region	497912	497953	.	+	.	ID=id343;Note=PS00329 Heat shock hsp70 proteins family signature 2.;Dbxref=GeneID:1173312;gbkey=misc_feature;gene=dnaK
NC_003143.1	RefSeq	region	498347	498391	.	+	.	ID=id344;Note=PS01036 Heat shock hsp70 proteins family signature 3.;Dbxref=GeneID:1173312;gbkey=misc_feature;gene=dnaK
NC_003143.1	RefSeq	gene	499361	500500	.	+	.	ID=gene451;Name=dnaJ;Dbxref=GeneID:1173313;gbkey=Gene;gene=dnaJ;gene_synonym=groP;locus_tag=YPO0469
NC_003143.1	RefSeq	CDS	499361	500500	.	+	0	ID=cds434;Name=YP_002345541.1;Parent=gene451;Note=chaperone Hsp40%3B co-chaperone with DnaK%3B Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins%2C also in an autonomous%2C dnaK-independent fashion;Dbxref=InterPro:IPR001305,InterPro:IPR001623,InterPro:IPR002939,InterPro:IPR003095,InterPro:IPR008971,InterPro:IPR012724,UniProtKB%2FTrEMBL:Q0WJJ7,Genbank:YP_002345541.1,GeneID:1173313;gbkey=CDS;gene=dnaJ;product=molecular chaperone DnaJ;protein_id=YP_002345541.1;transl_table=11
NC_003143.1	RefSeq	region	499499	499558	.	+	.	ID=id345;Note=PS00636 Nt-dnaJ domain signature.;Dbxref=GeneID:1173313;gbkey=misc_feature;gene=dnaJ
NC_003143.1	RefSeq	region	499799	499873	.	+	.	ID=id346;Note=PS00637 CXXCXGXG dnaJ domain signature.;Dbxref=GeneID:1173313;gbkey=misc_feature;gene=dnaJ
NC_003143.1	RefSeq	region	499799	499816	.	+	.	ID=id347;Note=PS00190 Cytochrome c family heme-binding site signature.;Dbxref=GeneID:1173313;gbkey=misc_feature;gene=dnaJ
NC_003143.1	RefSeq	region	499958	499975	.	+	.	ID=id348;Note=PS00190 Cytochrome c family heme-binding site signature.;Dbxref=GeneID:1173313;gbkey=misc_feature;gene=dnaJ
NC_003143.1	RefSeq	gene	500743	501927	.	+	.	ID=gene452;Name=nhaA;Dbxref=GeneID:1173314;gbkey=Gene;gene=nhaA;gene_synonym=b0019,nhaA;locus_tag=YPO0470
NC_003143.1	RefSeq	CDS	500743	501927	.	+	0	ID=cds435;Name=YP_002345542.1;Parent=gene452;Note=exports sodium by using the electrochemical proton gradient to allow protons into the cell%3B functions in adaptation to high salinity and alkaline pH%3B activity increases at higher pH%3B downregulated at acidic pH;Dbxref=InterPro:IPR004670,UniProtKB%2FTrEMBL:Q7CG77,Genbank:YP_002345542.1,GeneID:1173314;gbkey=CDS;gene=nhaA;product=pH-dependent sodium%2Fproton antiporter;protein_id=YP_002345542.1;transl_table=11
NC_003143.1	RefSeq	gene	502057	502956	.	+	.	ID=gene453;Name=nhaR;Dbxref=GeneID:1173315;gbkey=Gene;gene=nhaR;gene_synonym=b0020,nhaR;locus_tag=YPO0471
NC_003143.1	RefSeq	CDS	502057	502956	.	+	0	ID=cds436;Name=YP_002345543.1;Parent=gene453;Note=Na%2B%2FH%2B antiporter regulatory protein%3B activates the genes nhaA and osmC;Dbxref=InterPro:IPR000847,InterPro:IPR005119,InterPro:IPR011991,UniProtKB%2FTrEMBL:Q7CG78,Genbank:YP_002345543.1,GeneID:1173315;gbkey=CDS;gene=nhaR;product=transcriptional activator NhaR;protein_id=YP_002345543.1;transl_table=11
NC_003143.1	RefSeq	region	502120	502212	.	+	.	ID=id349;Note=PS00044 Bacterial regulatory proteins%2C lysR family signature.;Dbxref=GeneID:1173315;gbkey=misc_feature;gene=nhaR
NC_003143.1	RefSeq	gene	503087	503350	.	-	.	ID=gene454;Name=rpsT;Dbxref=GeneID:1173316;gbkey=Gene;gene=rpsT;locus_tag=YPO0472
NC_003143.1	RefSeq	CDS	503087	503350	.	-	0	ID=cds437;Name=YP_002345544.1;Parent=gene454;Note=binds directly to the 16S rRNA and is involved in post-translational inhibition of arginine and ornithine decarboxylase;Dbxref=InterPro:IPR002583,UniProtKB%2FTrEMBL:Q0WJJ4,Genbank:YP_002345544.1,GeneID:1173316;gbkey=CDS;gene=rpsT;product=30S ribosomal protein S20;protein_id=YP_002345544.1;transl_table=11
NC_003143.1	RefSeq	gene	503765	504703	.	+	.	ID=gene455;Name=ribF;Dbxref=GeneID:1173318;gbkey=Gene;gene=ribF;locus_tag=YPO0474
NC_003143.1	RefSeq	CDS	503765	504703	.	+	0	ID=cds438;Name=YP_002345546.1;Parent=gene455;Note=catalyzes the formation of FMN from riboflavin and the formation of FAD from FMN%3B in Bacillus the ribC gene has both flavokinase and FAD synthetase activities;Dbxref=InterPro:IPR002606,UniProtKB%2FTrEMBL:Q7CG79,Genbank:YP_002345546.1,GeneID:1173318;gbkey=CDS;gene=ribF;product=bifunctional riboflavin kinase%2FFMN adenylyltransferase;protein_id=YP_002345546.1;transl_table=11
NC_003143.1	RefSeq	gene	504735	507551	.	+	.	ID=gene456;Name=ileS;Dbxref=GeneID:1173319;gbkey=Gene;gene=ileS;gene_synonym=ilvS;locus_tag=YPO0475
NC_003143.1	RefSeq	CDS	504735	507551	.	+	0	ID=cds439;Name=YP_002345547.1;Parent=gene456;Note=IleRS%3B catalyzes the formation of isoleucyl-tRNA%28Ile%29 from isoleucine and tRNA%28Ile%29%3B since isoleucine and other amino acids such as valine are similar%2C there are additional editing function in this enzyme%3B one is involved in hydrolysis of activated valine-AMP and the other is involved in deacylation of mischarged Val-tRNA%28Ile%29%3B there are two active sites%2C one for aminoacylation and one for editing%3B class-I aminoacyl-tRNA synthetase family type 1 subfamily%3B some organisms carry two different copies of this enzyme;Dbxref=InterPro:IPR001412,InterPro:IPR002110,InterPro:IPR002300,InterPro:IPR002301,InterPro:IPR009008,InterPro:IPR009080,InterPro:IPR010663,InterPro:IPR013155,UniProtKB%2FTrEMBL:Q0WJJ1,Genbank:YP_002345547.1,GeneID:1173319;gbkey=CDS;gene=ileS;product=isoleucyl-tRNA synthetase;protein_id=YP_002345547.1;transl_table=11
NC_003143.1	RefSeq	region	504906	504941	.	+	.	ID=id350;Note=PS00178 Aminoacyl-transfer RNA synthetases class-I signature.;Dbxref=GeneID:1173319;gbkey=misc_feature;gene=ileS
NC_003143.1	RefSeq	region	505590	505622	.	+	.	ID=id351;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site.;Dbxref=GeneID:1173319;gbkey=misc_feature;gene=ileS
NC_003143.1	RefSeq	gene	507551	508060	.	+	.	ID=gene457;Name=lspA;Dbxref=GeneID:1173320;gbkey=Gene;gene=lspA;locus_tag=YPO0476
NC_003143.1	RefSeq	CDS	507551	508060	.	+	0	ID=cds440;Name=YP_002345548.1;Parent=gene457;Note=lipoprotein signal peptidase%3B integral membrane protein that removes signal peptides from prolipoproteins during lipoprotein biosynthesis;Dbxref=InterPro:IPR001872,UniProtKB%2FTrEMBL:Q0WJJ0,Genbank:YP_002345548.1,GeneID:1173320;gbkey=CDS;gene=lspA;product=lipoprotein signal peptidase;protein_id=YP_002345548.1;transl_table=11
NC_003143.1	RefSeq	region	507866	507898	.	+	.	ID=id352;Note=PS00855 Signal peptidases II signature.;Dbxref=GeneID:1173320;gbkey=misc_feature;gene=lspA
NC_003143.1	RefSeq	gene	508128	508586	.	+	.	ID=gene458;Name=fkpB;Dbxref=GeneID:1173321;gbkey=Gene;gene=fkpB;gene_synonym=fkpB,slpA;locus_tag=YPO0476a
NC_003143.1	RefSeq	CDS	508128	508586	.	+	0	ID=cds441;Name=YP_002345549.1;Parent=gene458;Dbxref=InterPro:IPR001179,UniProtKB%2FTrEMBL:Q0WJI9,Genbank:YP_002345549.1,GeneID:1173321;gbkey=CDS;gene=fkpB;product=FKBP-type peptidylprolyl isomerase;protein_id=YP_002345549.1;transl_table=11
NC_003143.1	RefSeq	region	508152	508199	.	+	.	ID=id353;Note=PS00453 FKBP-type peptidyl-prolyl cis-trans isomerase signature 1.;Dbxref=GeneID:1173321;gbkey=misc_feature;gene=fkpB
NC_003143.1	RefSeq	region	508245	508331	.	+	.	ID=id354;Note=PS00454 FKBP-type peptidyl-prolyl cis-trans isomerase signature 2.;Dbxref=GeneID:1173321;gbkey=misc_feature;gene=fkpB
NC_003143.1	RefSeq	gene	508567	509520	.	+	.	ID=gene459;Name=ispH;Dbxref=GeneID:1173322;gbkey=Gene;gene=ispH;gene_synonym=lytB;locus_tag=YPO0477
NC_003143.1	RefSeq	CDS	508567	509520	.	+	0	ID=cds442;Name=YP_002345550.1;Parent=gene459;Note=catalyzes the conversion of 1-hydroxy-2-methyl-2-%28E%29-butenyl 4-diphosphate into isopentenyl diphosphate %28IPP%29 and dimethylallyl diphosphate %28DMAPP%29%3B functions in the nonmevalonate isoprenoid biosynthesis pathway;Dbxref=InterPro:IPR003451,UniProtKB%2FTrEMBL:Q0WJI8,Genbank:YP_002345550.1,GeneID:1173322;gbkey=CDS;gene=ispH;product=4-hydroxy-3-methylbut-2-enyl diphosphate reductase;protein_id=YP_002345550.1;transl_table=11
NC_003143.1	RefSeq	repeat_region	509757	510468	.	+	.	ID=id355;Note=Contains a %27G%27 at nucleotide position 315%7EIS200-like insertion sequence:IS1541;gbkey=repeat_region
NC_003143.1	RefSeq	gene	509902	510360	.	+	.	ID=gene460;Name=tnp;Dbxref=GeneID:1173324;gbkey=Gene;gene=tnp;locus_tag=YPO0479
NC_003143.1	RefSeq	CDS	509902	510360	.	+	0	ID=cds443;Name=YP_002345552.1;Parent=gene460;Dbxref=InterPro:IPR002686,UniProtKB%2FTrEMBL:Q74YM6,Genbank:YP_002345552.1,GeneID:1173324;gbkey=CDS;gene=tnp;product=transposase for the IS1541 insertion element;protein_id=YP_002345552.1;transl_table=11
NC_003143.1	RefSeq	gene	510813	511634	.	+	.	ID=gene461;Name=dapB;Dbxref=GeneID:1173325;gbkey=Gene;gene=dapB;locus_tag=YPO0480
NC_003143.1	RefSeq	CDS	510813	511634	.	+	0	ID=cds444;Name=YP_002345553.1;Parent=gene461;Note=catalyzes the reduction of 2%2C3-dihydrodipicolinate to 2%2C3%2C4%2C5-tetrahydrodipicolinate in lysine and diaminopimelate biosynthesis;Dbxref=InterPro:IPR000846,InterPro:IPR011770,UniProtKB%2FTrEMBL:Q0WJI5,Genbank:YP_002345553.1,GeneID:1173325;gbkey=CDS;gene=dapB;product=dihydrodipicolinate reductase;protein_id=YP_002345553.1;transl_table=11
NC_003143.1	RefSeq	region	511272	511325	.	+	.	ID=id356;Note=PS01298 Dihydrodipicolinate reductase signature.;Dbxref=GeneID:1173325;gbkey=misc_feature;gene=dapB
NC_003143.1	RefSeq	gene	512107	513282	.	+	.	ID=gene462;Name=carA;Dbxref=GeneID:1173326;gbkey=Gene;gene=carA;gene_synonym=pyrA;locus_tag=YPO0481
NC_003143.1	RefSeq	CDS	512107	513282	.	+	0	ID=cds445;Name=YP_002345554.1;Parent=gene462;Note=catalyzes production of carbamoyl phosphate from bicarbonate and glutamine in pyrimidine and arginine biosynthesis pathways%3B forms an octamer composed of four CarAB dimers;Dbxref=InterPro:IPR000991,InterPro:IPR001317,InterPro:IPR002474,InterPro:IPR006220,InterPro:IPR006274,InterPro:IPR011702,InterPro:IPR012998,UniProtKB%2FTrEMBL:Q0WJI4,Genbank:YP_002345554.1,GeneID:1173326;gbkey=CDS;gene=carA;product=carbamoyl phosphate synthase small subunit;protein_id=YP_002345554.1;transl_table=11
NC_003143.1	RefSeq	region	512896	512931	.	+	.	ID=id357;Note=PS00442 Glutamine amidotransferases class-I active site.;Dbxref=GeneID:1173326;gbkey=misc_feature;gene=carA
NC_003143.1	RefSeq	gene	513298	516531	.	+	.	ID=gene463;Name=carB;Dbxref=GeneID:1173327;gbkey=Gene;gene=carB;gene_synonym=pyrA;locus_tag=YPO0482
NC_003143.1	RefSeq	CDS	513298	516531	.	+	0	ID=cds446;Name=YP_002345555.1;Parent=gene463;Note=four CarB-CarA dimers form the carbamoyl phosphate synthetase holoenzyme that catalyzes the production of carbamoyl phosphate%3B CarB is responsible for the amidotransferase activity;Dbxref=InterPro:IPR005479,InterPro:IPR005480,InterPro:IPR005481,InterPro:IPR005483,InterPro:IPR006275,InterPro:IPR011607,InterPro:IPR011761,InterPro:IPR013816,InterPro:IPR013817,UniProtKB%2FTrEMBL:Q0WJI3,Genbank:YP_002345555.1,GeneID:1173327;gbkey=CDS;gene=carB;product=carbamoyl phosphate synthase large subunit;protein_id=YP_002345555.1;transl_table=11
NC_003143.1	RefSeq	region	513337	513369	.	+	.	ID=id358;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site.;Dbxref=GeneID:1173327;gbkey=misc_feature;gene=carB
NC_003143.1	RefSeq	region	513787	513831	.	+	.	ID=id359;Note=PS00866 Carbamoyl-phosphate synthase subdomain signature 1.;Dbxref=GeneID:1173327;gbkey=misc_feature;gene=carB
NC_003143.1	RefSeq	region	514186	514209	.	+	.	ID=id360;Note=PS00867 Carbamoyl-phosphate synthase subdomain signature 2.;Dbxref=GeneID:1173327;gbkey=misc_feature;gene=carB
NC_003143.1	RefSeq	region	515425	515469	.	+	.	ID=id361;Note=PS00866 Carbamoyl-phosphate synthase subdomain signature 1.;Dbxref=GeneID:1173327;gbkey=misc_feature;gene=carB
NC_003143.1	RefSeq	region	515812	515835	.	+	.	ID=id362;Note=PS00867 Carbamoyl-phosphate synthase subdomain signature 2.;Dbxref=GeneID:1173327;gbkey=misc_feature;gene=carB
NC_003143.1	RefSeq	gene	516759	517373	.	-	.	ID=gene464;Name=YPO0483;Dbxref=GeneID:1173328;gbkey=Gene;locus_tag=YPO0483
NC_003143.1	RefSeq	CDS	516759	517373	.	-	0	ID=cds447;Name=YP_002345556.1;Parent=gene464;Dbxref=InterPro:IPR001123,UniProtKB%2FTrEMBL:Q0WJI2,Genbank:YP_002345556.1,GeneID:1173328;gbkey=CDS;product=LysE type translocator;protein_id=YP_002345556.1;transl_table=11
NC_003143.1	RefSeq	gene	517697	518497	.	+	.	ID=gene465;Name=yjjP;Dbxref=GeneID:1173329;gbkey=Gene;gene=yjjP;gene_synonym=yjjP;locus_tag=YPO0484
NC_003143.1	RefSeq	CDS	517697	518497	.	+	0	ID=cds448;Name=YP_002345557.1;Parent=gene465;Dbxref=InterPro:IPR010619,UniProtKB%2FTrEMBL:Q7CG82,Genbank:YP_002345557.1,GeneID:1173329;gbkey=CDS;gene=yjjP;product=hypothetical protein;protein_id=YP_002345557.1;transl_table=11
NC_003143.1	RefSeq	gene	518488	518949	.	+	.	ID=gene466;Name=yjjP;Dbxref=GeneID:1173330;gbkey=Gene;gene=yjjP;locus_tag=YPO0485
NC_003143.1	RefSeq	CDS	518488	518949	.	+	0	ID=cds449;Name=YP_002345558.2;Parent=gene466;Dbxref=UniProtKB%2FTrEMBL:Q0WJI0,Genbank:YP_002345558.2,GeneID:1173330;gbkey=CDS;product=hypothetical protein;protein_id=YP_002345558.2;transl_table=11
NC_003143.1	RefSeq	gene	519099	519581	.	+	.	ID=gene467;Name=folA;Dbxref=GeneID:1173331;gbkey=Gene;gene=folA;gene_synonym=tmrA;locus_tag=YPO0486
NC_003143.1	RefSeq	CDS	519099	519581	.	+	0	ID=cds450;Name=YP_002345559.1;Parent=gene467;Note=catalyzes the reduction of dihydrofolate to tetrahydrofolate;Dbxref=InterPro:IPR001796,InterPro:IPR012259,UniProtKB%2FTrEMBL:Q7CG83,Genbank:YP_002345559.1,GeneID:1173331;gbkey=CDS;gene=folA;product=dihydrofolate reductase;protein_id=YP_002345559.1;transl_table=11
NC_003143.1	RefSeq	region	519138	519206	.	+	.	ID=id363;Note=PS00075 Dihydrofolate reductase signature.;Dbxref=GeneID:1173331;gbkey=misc_feature;gene=folA
NC_003143.1	RefSeq	repeat_region	519648	520359	.	+	.	ID=id364;Note=Contains a %27G%27 at nucleotide position 315%7EIS200-like insertion sequence:IS1541;gbkey=repeat_region
NC_003143.1	RefSeq	gene	519793	520251	.	+	.	ID=gene468;Name=tnp;Dbxref=GeneID:1173332;gbkey=Gene;gene=tnp;locus_tag=YPO0487
NC_003143.1	RefSeq	CDS	519793	520251	.	+	0	ID=cds451;Name=YP_002345560.1;Parent=gene468;Dbxref=InterPro:IPR002686,UniProtKB%2FTrEMBL:Q74YM6,Genbank:YP_002345560.1,GeneID:1173332;gbkey=CDS;gene=tnp;product=transposase for the IS1541 insertion element;protein_id=YP_002345560.1;transl_table=11
NC_003143.1	RefSeq	gene	520355	520519	.	-	.	ID=gene469;Name=YPO0489a;Dbxref=GeneID:16744737;gbkey=Gene;locus_tag=YPO0489a
NC_003143.1	RefSeq	CDS	520355	520519	.	-	0	ID=cds452;Name=YP_008479680.1;Parent=gene469;Dbxref=Genbank:YP_008479680.1,GeneID:16744737;gbkey=CDS;product=hypothetical protein;protein_id=YP_008479680.1;transl_table=11
NC_003143.1	RefSeq	gene	521134	521598	.	+	.	ID=gene470;Name=YPO0489;Dbxref=GeneID:1173334;gbkey=Gene;locus_tag=YPO0489
NC_003143.1	RefSeq	CDS	521134	521598	.	+	0	ID=cds453;Name=YP_002345562.1;Parent=gene470;Dbxref=UniProtKB%2FTrEMBL:Q7CG85,Genbank:YP_002345562.1,GeneID:1173334;gbkey=CDS;product=hypothetical protein;protein_id=YP_002345562.1;transl_table=11
NC_003143.1	RefSeq	gene	521688	522557	.	-	.	ID=gene471;Name=apaH;Dbxref=GeneID:1173335;gbkey=Gene;gene=apaH;gene_synonym=b0049;locus_tag=YPO0490
NC_003143.1	RefSeq	CDS	521688	522557	.	-	0	ID=cds454;Name=YP_002345563.1;Parent=gene471;Note=hydrolyzes P%281%29%2CP%284%29-bis%285%27-adenosyl%29 tetraphosphate to form 2 ADP;Dbxref=InterPro:IPR004617,InterPro:IPR004843,UniProtKB%2FTrEMBL:Q0WJH5,Genbank:YP_002345563.1,GeneID:1173335;gbkey=CDS;gene=apaH;product=diadenosine tetraphosphatase;protein_id=YP_002345563.1;transl_table=11
NC_003143.1	RefSeq	gene	522574	522951	.	-	.	ID=gene472;Name=apaG;Dbxref=GeneID:1173336;gbkey=Gene;gene=apaG;gene_synonym=corD;locus_tag=YPO0491
NC_003143.1	RefSeq	CDS	522574	522951	.	-	0	ID=cds455;Name=YP_002345564.1;Parent=gene472;Note=protein associated with Co2%2B and Mg2%2B efflux;Dbxref=InterPro:IPR007474,UniProtKB%2FTrEMBL:Q0WJH4,Genbank:YP_002345564.1,GeneID:1173336;gbkey=CDS;gene=apaG;product=ApaG protein;protein_id=YP_002345564.1;transl_table=11
NC_003143.1	RefSeq	gene	522965	523783	.	-	.	ID=gene473;Name=ksgA;Dbxref=GeneID:1173337;gbkey=Gene;gene=ksgA;gene_synonym=rsmA;locus_tag=YPO0492
NC_003143.1	RefSeq	CDS	522965	523783	.	-	0	ID=cds456;Name=YP_002345565.1;Parent=gene473;Note=catalyzes the transfer of a total of four methyl groups from S-adenosyl-l-methionine %28S-AdoMet%29 to two adjacent adenosine bases A1518 and A1519 in 16S rRNA%3B mutations in ksgA causes resistance to the translation initiation inhibitor kasugamycin;Dbxref=InterPro:IPR001737,InterPro:IPR011530,UniProtKB%2FTrEMBL:Q0WJH3,Genbank:YP_002345565.1,GeneID:1173337;gbkey=CDS;gene=ksgA;product=dimethyladenosine transferase;protein_id=YP_002345565.1;transl_table=11
NC_003143.1	RefSeq	region	523580	523663	.	-	.	ID=id365;Note=PS01131 Ribosomal RNA adenine dimethylases signature.;Dbxref=GeneID:1173337;gbkey=misc_feature;gene=ksgA
NC_003143.1	RefSeq	gene	523776	524771	.	-	.	ID=gene474;Name=pdxA;Dbxref=GeneID:1173338;gbkey=Gene;gene=pdxA;locus_tag=YPO0493
NC_003143.1	RefSeq	CDS	523776	524771	.	-	0	ID=cds457;Name=YP_002345566.1;Parent=gene474;Note=catalyzes oxidation of 4-%28phosphohydroxy%29-L-threonine into 2-amino-3-oxo-4-%28phosphohydroxy%29butyric acid which decarboxylates to form 1-amino-3-%28phosphohydroxy%29propan-2-one %283-amino-2-oxopropyl phosphate%29;Dbxref=InterPro:IPR005255,UniProtKB%2FTrEMBL:Q0WJH2,Genbank:YP_002345566.1,GeneID:1173338;gbkey=CDS;gene=pdxA;product=4-hydroxythreonine-4-phosphate dehydrogenase;protein_id=YP_002345566.1;transl_table=11
NC_003143.1	RefSeq	gene	524755	526059	.	-	.	ID=gene475;Name=surA;Dbxref=GeneID:1173339;gbkey=Gene;gene=surA;locus_tag=YPO0494
NC_003143.1	RefSeq	CDS	524755	526059	.	-	0	ID=cds458;Name=YP_002345567.1;Parent=gene475;Note=Chaperone involved in the folding of extracytoplasmic proteins%2C especially OmpA%2C OmpF and LamB;Dbxref=InterPro:IPR000297,UniProtKB%2FTrEMBL:Q7CG87,Genbank:YP_002345567.1,GeneID:1173339;gbkey=CDS;gene=surA;product=peptidyl-prolyl cis-trans isomerase SurA;protein_id=YP_002345567.1;transl_table=11
NC_003143.1	RefSeq	region	525103	525126	.	-	.	ID=id366;Note=PS00017 ATP%2FGTP-binding site motif A %28P-loop%29.;Dbxref=GeneID:1173339;gbkey=misc_feature;gene=surA
NC_003143.1	RefSeq	region	525364	525426	.	-	.	ID=id367;Note=PS01096 PpiC-type peptidyl-prolyl cis-trans isomerase signature.;Dbxref=GeneID:1173339;gbkey=misc_feature;gene=surA
NC_003143.1	RefSeq	gene	526127	528469	.	-	.	ID=gene476;Name=imp;Dbxref=GeneID:1173340;gbkey=Gene;gene=imp;gene_synonym=ostA;locus_tag=YPO0495
NC_003143.1	RefSeq	CDS	526127	528469	.	-	0	ID=cds459;Name=YP_002345568.1;Parent=gene476;Note=determines N-hexane tolerance and is involved in outer membrane permeability;Dbxref=InterPro:IPR002016,InterPro:IPR005653,InterPro:IPR007543,UniProtKB%2FTrEMBL:Q0WJH0,Genbank:YP_002345568.1,GeneID:1173340;gbkey=CDS;gene=imp;product=organic solvent tolerance protein;protein_id=YP_002345568.1;transl_table=11
NC_003143.1	RefSeq	region	526181	526213	.	-	.	ID=id368;Note=PS00435 Peroxidases proximal heme-ligand signature.;Dbxref=GeneID:1173340;gbkey=misc_feature;gene=imp
NC_003143.1	RefSeq	gene	528654	529487	.	+	.	ID=gene477;Name=djlA;Dbxref=GeneID:1173341;gbkey=Gene;gene=djlA;locus_tag=YPO0496
NC_003143.1	RefSeq	CDS	528654	529487	.	+	0	ID=cds460;Name=YP_002345569.1;Parent=gene477;Note=functions as a co-chaperone with DnaK%3B involved in regulation of colanic acid capsule%3B inner membrane protein%3B dimerized via transmembrane domain%3B J-like domain is cytoplasmic and can functionally substitute for DnaJ%3B stimulates synthesis of colanic acid mucoid capsule through the RcsB%2FC signal transduction system;Dbxref=InterPro:IPR001623,UniProtKB%2FTrEMBL:Q0WJG9,Genbank:YP_002345569.1,GeneID:1173341;gbkey=CDS;gene=djlA;product=Dna-J like membrane chaperone protein;protein_id=YP_002345569.1;transl_table=11
NC_003143.1	RefSeq	region	528672	528740	.	+	.	ID=id369;Note=1 probable transmembrane helix predicted;Dbxref=GeneID:1173341;gbkey=misc_feature;gene=djlA
NC_003143.1	RefSeq	region	529110	529175	.	+	.	ID=id370;Note=Predicted helix-turn-helix motif with score 1033 %28%2B2.71 SD%29 at aa 153-174%2C sequence QVLYVIAEELGISRGQFDQFLR;Dbxref=GeneID:1173341;gbkey=misc_feature;gene=djlA
NC_003143.1	RefSeq	gene	529785	530405	.	-	.	ID=gene478;Name=rluA;Dbxref=GeneID:1173342;gbkey=Gene;gene=rluA;locus_tag=YPO0497
NC_003143.1	RefSeq	CDS	529785	530405	.	-	0	ID=cds461;Name=YP_002345570.1;Parent=gene478;Dbxref=InterPro:IPR006145,InterPro:IPR006224,UniProtKB%2FTrEMBL:Q0WJG8,Genbank:YP_002345570.1,GeneID:1173342;gbkey=CDS;gene=rluA;product=ribosomal large subunit pseudouridine synthase A;protein_id=YP_002345570.1;transl_table=11
NC_003143.1	RefSeq	region	530016	530081	.	-	.	ID=id371;Note=Predicted helix-turn-helix motif with score 1027 %28%2B2.68 SD%29 at aa 99-120%2C sequence RPKQKVCYETGKSAQTEYQVIS;Dbxref=GeneID:1173342;gbkey=misc_feature;gene=rluA
NC_003143.1	RefSeq	region	530223	530267	.	-	.	ID=id372;Note=PS01129 Rlu family of pseudouridine synthase signature.;Dbxref=GeneID:1173342;gbkey=misc_feature;gene=rluA
NC_003143.1	RefSeq	gene	531628	532371	.	-	.	ID=gene479;Name=YPO0498;Dbxref=GeneID:1173343;gbkey=Gene;locus_tag=YPO0498
NC_003143.1	RefSeq	CDS	531628	532371	.	-	0	ID=cds462;Name=YP_002345571.1;Parent=gene479;Note=No significant database hits;Dbxref=UniProtKB%2FTrEMBL:Q7CG89,Genbank:YP_002345571.1,GeneID:1173343;gbkey=CDS;product=hypothetical protein;protein_id=YP_002345571.1;transl_table=11
NC_003143.1	RefSeq	gene	532701	533714	.	+	.	ID=gene480;Name=YPO0499;Dbxref=GeneID:1173344;gbkey=Gene;locus_tag=YPO0499
NC_003143.1	RefSeq	CDS	532701	533714	.	+	0	ID=cds463;Name=YP_002345572.1;Parent=gene480;Dbxref=InterPro:IPR010657,UniProtKB%2FTrEMBL:Q7CG90,Genbank:YP_002345572.1,GeneID:1173344;gbkey=CDS;product=hypothetical protein;protein_id=YP_002345572.1;transl_table=11
NC_003143.1	RefSeq	gene	533725	534285	.	+	.	ID=gene481;Name=YPO0500;Dbxref=GeneID:1173345;gbkey=Gene;locus_tag=YPO0500
NC_003143.1	RefSeq	CDS	533725	534285	.	+	0	ID=cds464;Name=YP_002345573.1;Parent=gene481;Dbxref=InterPro:IPR008312,UniProtKB%2FTrEMBL:Q7CG91,Genbank:YP_002345573.1,GeneID:1173345;gbkey=CDS;product=hypothetical protein;protein_id=YP_002345573.1;transl_table=11
NC_003143.1	RefSeq	gene	534285	535796	.	+	.	ID=gene482;Name=YPO0501;Dbxref=GeneID:1173346;gbkey=Gene;locus_tag=YPO0501
NC_003143.1	RefSeq	CDS	534285	535796	.	+	0	ID=cds465;Name=YP_002345574.1;Parent=gene482;Dbxref=InterPro:IPR010269,UniProtKB%2FTrEMBL:Q7CG92,Genbank:YP_002345574.1,GeneID:1173346;gbkey=CDS;product=hypothetical protein;protein_id=YP_002345574.1;transl_table=11
NC_003143.1	RefSeq	gene	535959	536477	.	+	.	ID=gene483;Name=YPO0502;Dbxref=GeneID:1173347;gbkey=Gene;locus_tag=YPO0502
NC_003143.1	RefSeq	CDS	535959	536477	.	+	0	ID=cds466;Name=YP_002345575.1;Parent=gene483;Dbxref=InterPro:IPR008514,UniProtKB%2FTrEMBL:Q7CG93,Genbank:YP_002345575.1,GeneID:1173347;gbkey=CDS;product=hypothetical protein;protein_id=YP_002345575.1;transl_table=11
NC_003143.1	RefSeq	gene	536551	536994	.	+	.	ID=gene484;Name=YPO0503;Dbxref=GeneID:1173348;gbkey=Gene;locus_tag=YPO0503
NC_003143.1	RefSeq	CDS	536551	536994	.	+	0	ID=cds467;Name=YP_002345576.1;Parent=gene484;Dbxref=InterPro:IPR010745,UniProtKB%2FTrEMBL:Q7CG94,Genbank:YP_002345576.1,GeneID:1173348;gbkey=CDS;product=hypothetical protein;protein_id=YP_002345576.1;transl_table=11
NC_003143.1	RefSeq	gene	537027	538871	.	+	.	ID=gene485;Name=YPO0504;Dbxref=GeneID:1173349;gbkey=Gene;locus_tag=YPO0504
NC_003143.1	RefSeq	CDS	537027	538871	.	+	0	ID=cds468;Name=YP_002345577.1;Parent=gene485;Dbxref=InterPro:IPR010272,UniProtKB%2FTrEMBL:Q7CG95,Genbank:YP_002345577.1,GeneID:1173349;gbkey=CDS;product=hypothetical protein;protein_id=YP_002345577.1;transl_table=11
NC_003143.1	RefSeq	gene	538864	539847	.	+	.	ID=gene486;Name=YPO0505;Dbxref=GeneID:1173350;gbkey=Gene;locus_tag=YPO0505
NC_003143.1	RefSeq	CDS	538864	539847	.	+	0	ID=cds469;Name=YP_002345578.1;Parent=gene486;Dbxref=InterPro:IPR010732,UniProtKB%2FTrEMBL:Q0WJG0,Genbank:YP_002345578.1,GeneID:1173350;gbkey=CDS;product=hypothetical protein;protein_id=YP_002345578.1;transl_table=11
NC_003143.1	RefSeq	gene	539850	542453	.	+	.	ID=gene487;Name=clpB;Dbxref=GeneID:1173351;gbkey=Gene;gene=clpB;gene_synonym=htpM;locus_tag=YPO0506
NC_003143.1	RefSeq	CDS	539850	542453	.	+	0	ID=cds470;Name=YP_002345579.1;Parent=gene487;Dbxref=InterPro:IPR001270,InterPro:IPR003593,InterPro:IPR003959,InterPro:IPR004176,InterPro:IPR013093,UniProtKB%2FTrEMBL:Q7CG96,Genbank:YP_002345579.1,GeneID:1173351;gbkey=CDS;gene=clpB;product=Clp ATPase;protein_id=YP_002345579.1;transl_table=11
NC_003143.1	RefSeq	region	540549	540572	.	+	.	ID=id373;Note=PS00017 ATP%2FGTP-binding site motif A %28P-loop%29.;Dbxref=GeneID:1173351;gbkey=misc_feature;gene=clpB
NC_003143.1	RefSeq	region	541674	541697	.	+	.	ID=id374;Note=PS00017 ATP%2FGTP-binding site motif A %28P-loop%29.;Dbxref=GeneID:1173351;gbkey=misc_feature;gene=clpB
NC_003143.1	RefSeq	gene	542557	544905	.	+	.	ID=gene488;Name=YPO0507;Dbxref=GeneID:1173352;gbkey=Gene;locus_tag=YPO0507
NC_003143.1	RefSeq	CDS	542557	544905	.	+	0	ID=cds471;Name=YP_002345580.1;Parent=gene488;Dbxref=InterPro:IPR006533,UniProtKB%2FTrEMBL:Q7CG97,Genbank:YP_002345580.1,GeneID:1173352;gbkey=CDS;product=hypothetical protein;protein_id=YP_002345580.1;transl_table=11
NC_003143.1	RefSeq	gene	544918	547137	.	+	.	ID=gene489;Name=YPO0508;Dbxref=GeneID:1173353;gbkey=Gene;locus_tag=YPO0508;pseudo=true
NC_003143.1	RefSeq	gene	547163	548266	.	+	.	ID=gene490;Name=YPO0510;Dbxref=GeneID:1173355;gbkey=Gene;locus_tag=YPO0510
NC_003143.1	RefSeq	CDS	547163	548266	.	+	0	ID=cds472;Name=YP_002345583.1;Parent=gene490;Dbxref=InterPro:IPR001646,UniProtKB%2FTrEMBL:Q7CG98,Genbank:YP_002345583.1,GeneID:1173355;gbkey=CDS;product=hypothetical protein;protein_id=YP_002345583.1;transl_table=11
NC_003143.1	RefSeq	gene	548259	548876	.	+	.	ID=gene491;Name=YPO0511;Dbxref=GeneID:1173356;gbkey=Gene;locus_tag=YPO0511
NC_003143.1	RefSeq	CDS	548259	548876	.	+	0	ID=cds473;Name=YP_002345584.1;Parent=gene491;Note=No significant database hits;Dbxref=UniProtKB%2FTrEMBL:Q7CG99,Genbank:YP_002345584.1,GeneID:1173356;gbkey=CDS;product=hypothetical protein;protein_id=YP_002345584.1;transl_table=11
NC_003143.1	RefSeq	gene	548882	549247	.	+	.	ID=gene492;Name=YPO0511a;Dbxref=GeneID:1173357;gbkey=Gene;locus_tag=YPO0511a
NC_003143.1	RefSeq	CDS	548882	549247	.	+	0	ID=cds474;Name=YP_002345585.1;Parent=gene492;Dbxref=UniProtKB%2FTrEMBL:Q7CGA0,Genbank:YP_002345585.1,GeneID:1173357;gbkey=CDS;product=hypothetical protein;protein_id=YP_002345585.1;transl_table=11
NC_003143.1	RefSeq	gene	549240	549731	.	+	.	ID=gene493;Name=YPO0512;Dbxref=GeneID:1173358;gbkey=Gene;locus_tag=YPO0512
NC_003143.1	RefSeq	CDS	549240	549731	.	+	0	ID=cds475;Name=YP_002345586.1;Parent=gene493;Dbxref=UniProtKB%2FTrEMBL:Q74Q45,Genbank:YP_002345586.1,GeneID:1173358;gbkey=CDS;product=lipoprotein;protein_id=YP_002345586.1;transl_table=11
NC_003143.1	RefSeq	region	549252	549320	.	+	.	ID=id375;Note=1 probable transmembrane helix predicted;Dbxref=GeneID:1173358;gbkey=misc_feature
NC_003143.1	RefSeq	region	549273	549305	.	+	.	ID=id376;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site.;Dbxref=GeneID:1173358;gbkey=misc_feature
NC_003143.1	RefSeq	gene	549851	551206	.	+	.	ID=gene494;Name=YPO0513;Dbxref=GeneID:1173359;gbkey=Gene;locus_tag=YPO0513
NC_003143.1	RefSeq	CDS	549851	551206	.	+	0	ID=cds476;Name=YP_002345587.1;Parent=gene494;Dbxref=InterPro:IPR010263,UniProtKB%2FTrEMBL:Q0WJF1,Genbank:YP_002345587.1,GeneID:1173359;gbkey=CDS;product=hypothetical protein;protein_id=YP_002345587.1;transl_table=11
NC_003143.1	RefSeq	gene	551203	552813	.	+	.	ID=gene495;Name=YPO0514;Dbxref=GeneID:1173360;gbkey=Gene;locus_tag=YPO0514
NC_003143.1	RefSeq	CDS	551203	552813	.	+	0	ID=cds477;Name=YP_002345588.1;Parent=gene495;Dbxref=InterPro:IPR006665,UniProtKB%2FTrEMBL:Q0WJF0,Genbank:YP_002345588.1,GeneID:1173360;gbkey=CDS;product=hypothetical protein;protein_id=YP_002345588.1;transl_table=11
NC_003143.1	RefSeq	region	552148	552216	.	+	.	ID=id377;Note=1 probable transmembrane helix predicted;Dbxref=GeneID:1173360;gbkey=misc_feature
NC_003143.1	RefSeq	gene	552863	556315	.	+	.	ID=gene496;Name=YPO0515;Dbxref=GeneID:1173361;gbkey=Gene;locus_tag=YPO0515
NC_003143.1	RefSeq	CDS	552863	556315	.	+	0	ID=cds478;Name=YP_002345589.1;Parent=gene496;Dbxref=InterPro:IPR009612,InterPro:IPR010623,UniProtKB%2FTrEMBL:Q0WJE9,Genbank:YP_002345589.1,GeneID:1173361;gbkey=CDS;product=hypothetical protein;protein_id=YP_002345589.1;transl_table=11
NC_003143.1	RefSeq	region	553202	553225	.	+	.	ID=id378;Note=PS00017 ATP%2FGTP-binding site motif A %28P-loop%29.;Dbxref=GeneID:1173361;gbkey=misc_feature
NC_003143.1	RefSeq	gene	556337	556690	.	+	.	ID=gene497;Name=YPO0516;Dbxref=GeneID:1173362;gbkey=Gene;locus_tag=YPO0516
NC_003143.1	RefSeq	CDS	556337	556690	.	+	0	ID=cds479;Name=YP_002345590.1;Parent=gene497;Note=No significant database hits;Dbxref=UniProtKB%2FTrEMBL:Q0WJE8,Genbank:YP_002345590.1,GeneID:1173362;gbkey=CDS;product=hypothetical protein;protein_id=YP_002345590.1;transl_table=11
NC_003143.1	RefSeq	gene	556946	559852	.	-	.	ID=gene498;Name=hepA;Dbxref=GeneID:1173363;gbkey=Gene;gene=hepA;gene_synonym=rapA;locus_tag=YPO0517
NC_003143.1	RefSeq	CDS	556946	559852	.	-	0	ID=cds480;Name=YP_002345591.1;Parent=gene498;Note=transcription regulator that activates transcription by stimulating RNA polymerase %28RNAP%29 recycling in case of stress conditions such as supercoiled DNA or high salt concentrations. Probably acts by releasing the RNAP%2C when it is trapped or immobilized on tightly supercoiled DNA;Dbxref=InterPro:IPR000330,InterPro:IPR001650,InterPro:IPR002464,InterPro:IPR014001,InterPro:IPR014021,UniProtKB%2FTrEMBL:Q0WJE7,Genbank:YP_002345591.1,GeneID:1173363;gbkey=CDS;gene=hepA;product=ATP-dependent helicase HepA;protein_id=YP_002345591.1;transl_table=11
NC_003143.1	RefSeq	gene	560313	562682	.	-	.	ID=gene499;Name=dinA;Dbxref=GeneID:1173364;gbkey=Gene;gene=dinA;gene_synonym=polB;locus_tag=YPO0518
NC_003143.1	RefSeq	CDS	560313	562682	.	-	0	ID=cds481;Name=YP_002345592.1;Parent=gene499;Note=Has polymerase%2C DNA-binding and 3%27-5%27 exonuclease activities. In Aeropyrum pernix this protein is sensitive to aphidicolin and stable at 95%23C;Dbxref=InterPro:IPR006133,InterPro:IPR006134,InterPro:IPR006172,InterPro:IPR012337,UniProtKB%2FTrEMBL:Q7CGA1,Genbank:YP_002345592.1,GeneID:1173364;gbkey=CDS;gene=dinA;product=DNA polymerase II;protein_id=YP_002345592.1;transl_table=11
NC_003143.1	RefSeq	region	561015	561041	.	-	.	ID=id379;Note=PS00116 DNA polymerase family B signature.;Dbxref=GeneID:1173364;gbkey=misc_feature;gene=dinA
NC_003143.1	RefSeq	gene	562878	563645	.	+	.	ID=gene500;Name=YPO0519;Dbxref=GeneID:1173365;gbkey=Gene;locus_tag=YPO0519
NC_003143.1	RefSeq	CDS	562878	563645	.	+	0	ID=cds482;Name=YP_002345593.1;Parent=gene500;Dbxref=UniProtKB%2FTrEMBL:Q7CGA2,Genbank:YP_002345593.1,GeneID:1173365;gbkey=CDS;product=DedA family membrane protein;protein_id=YP_002345593.1;transl_table=11
NC_003143.1	RefSeq	gene	563714	564397	.	-	.	ID=gene501;Name=thiQ;Dbxref=GeneID:1173366;gbkey=Gene;gene=thiQ;locus_tag=YPO0520
NC_003143.1	RefSeq	CDS	563714	564397	.	-	0	ID=cds483;Name=YP_002345594.1;Parent=gene501;Note=with TbpA and ThiP is part of the thiamine and TPP transport system;Dbxref=InterPro:IPR003439,InterPro:IPR003593,InterPro:IPR005968,UniProtKB%2FTrEMBL:Q0WJE4,Genbank:YP_002345594.1,GeneID:1173366;gbkey=CDS;gene=thiQ;product=thiamine transporter ATP-binding protein;protein_id=YP_002345594.1;transl_table=11
NC_003143.1	RefSeq	region	563993	564037	.	-	.	ID=id380;Note=PS00211 ABC transporters family signature.;Dbxref=GeneID:1173366;gbkey=misc_feature;gene=thiQ
NC_003143.1	RefSeq	region	564308	564331	.	-	.	ID=id381;Note=PS00017 ATP%2FGTP-binding site motif A %28P-loop%29.;Dbxref=GeneID:1173366;gbkey=misc_feature;gene=thiQ
NC_003143.1	RefSeq	gene	564411	565970	.	-	.	ID=gene502;Name=thiP;Dbxref=GeneID:1173367;gbkey=Gene;gene=thiP;locus_tag=YPO0521
NC_003143.1	RefSeq	CDS	564411	565970	.	-	0	ID=cds484;Name=YP_002345595.1;Parent=gene502;Note=permease%3B with TbpA and ThiQ functions in transport of thiamine and thiamine pyrophosphate into the cell%3B repressed in presence of exogenous thiamine;Dbxref=InterPro:IPR000515,InterPro:IPR005947,UniProtKB%2FTrEMBL:Q0WJE3,Genbank:YP_002345595.1,GeneID:1173367;gbkey=CDS;gene=thiP;product=thiamine transporter membrane protein;protein_id=YP_002345595.1;transl_table=11
NC_003143.1	RefSeq	gene	565994	566986	.	-	.	ID=gene503;Name=tbpA;Dbxref=GeneID:1173368;gbkey=Gene;gene=tbpA;locus_tag=YPO0522
NC_003143.1	RefSeq	CDS	565994	566986	.	-	0	ID=cds485;Name=YP_002345596.1;Parent=gene503;Note=part of the thiamine and TPP transport system tbpA-thiPQ;Dbxref=InterPro:IPR005948,InterPro:IPR005967,InterPro:IPR006059,InterPro:IPR011587,UniProtKB%2FTrEMBL:Q74Q54,Genbank:YP_002345596.1,GeneID:1173368;gbkey=CDS;gene=tbpA;product=thiamine transporter substrate binding subunit;protein_id=YP_002345596.1;transl_table=11
NC_003143.1	RefSeq	gene	567541	567825	.	+	.	ID=gene504;Name=YPO0523;Dbxref=GeneID:1173369;gbkey=Gene;locus_tag=YPO0523
NC_003143.1	RefSeq	CDS	567541	567825	.	+	0	ID=cds486;Name=YP_002345597.1;Parent=gene504;Dbxref=UniProtKB%2FTrEMBL:Q74Q55,Genbank:YP_002345597.1,GeneID:1173369;gbkey=CDS;product=hypothetical protein;protein_id=YP_002345597.1;transl_table=11
NC_003143.1	RefSeq	gene	567926	569587	.	-	.	ID=gene505;Name=YPO0524;Dbxref=GeneID:1173370;gbkey=Gene;locus_tag=YPO0524
NC_003143.1	RefSeq	CDS	567926	569587	.	-	0	ID=cds487;Name=YP_002345598.1;Parent=gene505;Note=activates sgrS under glucose-phosphate stress conditions;Dbxref=InterPro:IPR000914,InterPro:IPR011991,UniProtKB%2FTrEMBL:Q74Q56,Genbank:YP_002345598.1,GeneID:1173370;gbkey=CDS;product=transcriptional regulator SgrR;protein_id=YP_002345598.1;transl_table=11
NC_003143.1	RefSeq	region	569453	569518	.	-	.	ID=id382;Note=Predicted helix-turn-helix motif with score 1566 %28%2B4.52 SD%29 at aa 24-45%2C sequence TTLQALAEVLNCSRRHVRSLLG;Dbxref=GeneID:1173370;gbkey=misc_feature
NC_003143.1	RefSeq	region	570251	571182	.	+	.	ID=id383;Note=Similar to Escherichia coli sugar efflux transporter SetA SW:SETA_ECOLI %28P31675%29 %28392 aa%29 fasta scores: E%28%29: 0%2C70.5%25 id in 386 aa%2C and to Erwinia chrysanthemi sugar efflux transporter SotA SW:SOTA_ERWCH %28Q9S3K0%29 %28393 aa%29 fasta scores: E%28%29: 0%2C 54.2%25 id in 393 aa. CDS disrupted by IS100 element at codon 311;Dbxref=PSEUDO:CAL19207.1;gbkey=misc_feature;part=1%2F2;pseudo=true
NC_003143.1	RefSeq	region	573139	573391	.	+	.	ID=id383;Note=Similar to Escherichia coli sugar efflux transporter SetA SW:SETA_ECOLI %28P31675%29 %28392 aa%29 fasta scores: E%28%29: 0%2C70.5%25 id in 386 aa%2C and to Erwinia chrysanthemi sugar efflux transporter SotA SW:SOTA_ERWCH %28Q9S3K0%29 %28393 aa%29 fasta scores: E%28%29: 0%2C 54.2%25 id in 393 aa. CDS disrupted by IS100 element at codon 311;Dbxref=PSEUDO:CAL19207.1;gbkey=misc_feature;part=2%2F2;pseudo=true
NC_003143.1	RefSeq	repeat_region	571185	573138	.	-	.	ID=id384;Note=insertion sequence:IS100;gbkey=repeat_region
NC_003143.1	RefSeq	repeat_region	571185	571212	.	+	.	ID=id385;Note=IS100 inverted repeat;gbkey=repeat_region
NC_003143.1	RefSeq	gene	571251	572033	.	-	.	ID=gene506;Name=YPO0527;Note=ypmt1.57c;Dbxref=GeneID:1173373;gbkey=Gene;locus_tag=YPO0527
NC_003143.1	RefSeq	CDS	571251	572033	.	-	0	ID=cds488;Name=YP_002345600.1;Parent=gene506;Dbxref=InterPro:IPR001270,InterPro:IPR002611,InterPro:IPR003593,UniProtKB%2FTrEMBL:Q7ARK4,Genbank:YP_002345600.1,GeneID:1173373;gbkey=CDS;product=transposase%2FIS protein;protein_id=YP_002345600.1;transl_table=11
NC_003143.1	RefSeq	region	571683	571706	.	-	.	ID=id386;Note=PS00017 ATP%2FGTP-binding site motif A %28P-loop%29.;Dbxref=GeneID:1173373;gbkey=misc_feature
NC_003143.1	RefSeq	gene	572030	573052	.	-	.	ID=gene507;Name=y1093;Dbxref=GeneID:1173374;gbkey=Gene;gene=y1093;gene_synonym=ypmt1;locus_tag=YPO0528
NC_003143.1	RefSeq	CDS	572030	573052	.	-	0	ID=cds489;Name=YP_002345601.1;Parent=gene507;Dbxref=InterPro:IPR001584,InterPro:IPR006120,InterPro:IPR009057,InterPro:IPR012287,InterPro:IPR012337,UniProtKB%2FTrEMBL:Q7ARN5,Genbank:YP_002345601.1,GeneID:1173374;gbkey=CDS;gene=y1093;product=transposase for insertion sequence IS100;protein_id=YP_002345601.1;transl_table=11
NC_003143.1	RefSeq	region	572936	573001	.	-	.	ID=id387;Note=Predicted helix-turn-helix motif with score 2147 %28%2B6.50 SD%29 at aa 18-39%2C sequence MSSRAIARELGISRNTVKRYLQ;Dbxref=GeneID:1173374;gbkey=misc_feature;gene=y1093
NC_003143.1	RefSeq	repeat_region	573111	573138	.	-	.	ID=id388;Note=IS100 inverted repeat;gbkey=repeat_region
NC_003143.1	RefSeq	gene	573632	574234	.	-	.	ID=gene508;Name=leuD;Dbxref=GeneID:1173375;gbkey=Gene;gene=leuD;locus_tag=YPO0530
NC_003143.1	RefSeq	CDS	573632	574234	.	-	0	ID=cds490;Name=YP_002345602.1;Parent=gene508;Note=catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate in leucine biosynthesis%3B forms a heterodimer of LeuC%2FD;Dbxref=InterPro:IPR000573,InterPro:IPR004431,InterPro:IPR012305,UniProtKB%2FTrEMBL:Q0WJD6,Genbank:YP_002345602.1,GeneID:1173375;gbkey=CDS;gene=leuD;product=isopropylmalate isomerase small subunit;protein_id=YP_002345602.1;transl_table=11
NC_003143.1	RefSeq	gene	574249	575679	.	-	.	ID=gene509;Name=leuC;Dbxref=GeneID:1173376;gbkey=Gene;gene=leuC;locus_tag=YPO0531
NC_003143.1	RefSeq	CDS	574249	575679	.	-	0	ID=cds491;Name=YP_002345603.1;Parent=gene509;Note=dehydratase component%2C catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate;Dbxref=InterPro:IPR001030,InterPro:IPR004430,InterPro:IPR012095,UniProtKB%2FTrEMBL:Q0WJD5,Genbank:YP_002345603.1,GeneID:1173376;gbkey=CDS;gene=leuC;product=isopropylmalate isomerase large subunit;protein_id=YP_002345603.1;transl_table=11
NC_003143.1	RefSeq	region	574426	574467	.	-	.	ID=id389;Note=PS01244 Aconitase family signature 2.;Dbxref=GeneID:1173376;gbkey=misc_feature;gene=leuC
NC_003143.1	RefSeq	region	574597	574647	.	-	.	ID=id390;Note=PS00450 Aconitase family signature 1.;Dbxref=GeneID:1173376;gbkey=misc_feature;gene=leuC
NC_003143.1	RefSeq	gene	575681	576772	.	-	.	ID=gene510;Name=leuB;Dbxref=GeneID:1173377;gbkey=Gene;gene=leuB;locus_tag=YPO0532
NC_003143.1	RefSeq	CDS	575681	576772	.	-	0	ID=cds492;Name=YP_002345604.1;Parent=gene510;Note=catalyzes the oxidation of 3-isopropylmalate to 3-carboxy-4-methyl-2-oxopentanoate in leucine biosynthesis;Dbxref=InterPro:IPR001804,InterPro:IPR004429,InterPro:IPR013814,UniProtKB%2FTrEMBL:Q0WJD4,Genbank:YP_002345604.1,GeneID:1173377;gbkey=CDS;gene=leuB;product=3-isopropylmalate dehydrogenase;protein_id=YP_002345604.1;transl_table=11
NC_003143.1	RefSeq	region	575975	576034	.	-	.	ID=id391;Note=PS00470 Isocitrate and isopropylmalate dehydrogenases signature.;Dbxref=GeneID:1173377;gbkey=misc_feature;gene=leuB
NC_003143.1	RefSeq	gene	576775	578337	.	-	.	ID=gene511;Name=leuA;Dbxref=GeneID:1173378;gbkey=Gene;gene=leuA;locus_tag=YPO0533
NC_003143.1	RefSeq	CDS	576775	578337	.	-	0	ID=cds493;Name=YP_002345605.1;Parent=gene511;Note=catalyzes the formation of 2-isopropylmalate from acetyl-CoA and 2-oxoisovalerate in leucine biosynthesis;Dbxref=InterPro:IPR000891,InterPro:IPR002034,InterPro:IPR005671,InterPro:IPR013709,UniProtKB%2FTrEMBL:Q0WJD3,Genbank:YP_002345605.1,GeneID:1173378;gbkey=CDS;gene=leuA;product=2-isopropylmalate synthase;protein_id=YP_002345605.1;transl_table=11
NC_003143.1	RefSeq	region	577702	577743	.	-	.	ID=id392;Note=PS00816 Alpha-isopropylmalate and homocitrate synthases signature 2.;Dbxref=GeneID:1173378;gbkey=misc_feature;gene=leuA
NC_003143.1	RefSeq	region	578254	578304	.	-	.	ID=id393;Note=PS00815 Alpha-isopropylmalate and homocitrate synthases signature 1.;Dbxref=GeneID:1173378;gbkey=misc_feature;gene=leuA
NC_003143.1	RefSeq	repeat_region	578376	579087	.	-	.	ID=id394;Note=Contains a %27G%27 at nucleotide position 315%7EIS200-like insertion sequence:IS1541;gbkey=repeat_region
NC_003143.1	RefSeq	gene	578484	578942	.	-	.	ID=gene512;Name=tnp;Dbxref=GeneID:1173379;gbkey=Gene;gene=tnp;locus_tag=YPO0534
NC_003143.1	RefSeq	CDS	578484	578942	.	-	0	ID=cds494;Name=YP_002345606.1;Parent=gene512;Dbxref=InterPro:IPR002686,UniProtKB%2FTrEMBL:Q74YM6,Genbank:YP_002345606.1,GeneID:1173379;gbkey=CDS;gene=tnp;product=transposase for the IS1541 insertion element;protein_id=YP_002345606.1;transl_table=11
NC_003143.1	RefSeq	region	579100	580243	.	-	.	ID=id395;Note=Region of noncoding DNA with low GC%25 content%2C33.12%25;gbkey=misc_feature
NC_003143.1	RefSeq	gene	580264	581220	.	+	.	ID=gene513;Name=leuO;Dbxref=GeneID:1173380;gbkey=Gene;gene=leuO;locus_tag=YPO0535
NC_003143.1	RefSeq	CDS	580264	581220	.	+	0	ID=cds495;Name=YP_002345607.1;Parent=gene513;Note=activator for leuABCD operon%3B member of LysR family of transcriptional activators;Dbxref=InterPro:IPR000847,InterPro:IPR005119,InterPro:IPR011991,UniProtKB%2FTrEMBL:Q0WJD1,Genbank:YP_002345607.1,GeneID:1173380;gbkey=CDS;gene=leuO;product=leucine transcriptional activator;protein_id=YP_002345607.1;transl_table=11
NC_003143.1	RefSeq	region	580381	580446	.	+	.	ID=id396;Note=Predicted helix-turn-helix motif with score 1520 %28%2B4.36 SD%29 at aa 40-61%2C sequence QNVTRAAQSLGMSQPAVSNAVA;Dbxref=GeneID:1173380;gbkey=misc_feature;gene=leuO
NC_003143.1	RefSeq	region	580384	580476	.	+	.	ID=id397;Note=PS00044 Bacterial regulatory proteins%2C lysR family signature.;Dbxref=GeneID:1173380;gbkey=misc_feature;gene=leuO
NC_003143.1	RefSeq	gene	581549	581755	.	+	.	ID=gene514;Name=YPO0536;Dbxref=GeneID:1173381;gbkey=Gene;locus_tag=YPO0536
NC_003143.1	RefSeq	CDS	581549	581755	.	+	0	ID=cds496;Name=YP_002345608.1;Parent=gene514;Note=Doubtful CDS with no significant database hits;Dbxref=UniProtKB%2FTrEMBL:Q74Q63,Genbank:YP_002345608.1,GeneID:1173381;gbkey=CDS;product=hypothetical protein;protein_id=YP_002345608.1;transl_table=11
NC_003143.1	RefSeq	gene	581752	583557	.	+	.	ID=gene515;Name=YPO0537;Dbxref=GeneID:1173382;gbkey=Gene;locus_tag=YPO0537
NC_003143.1	RefSeq	CDS	581752	583557	.	+	0	ID=cds497;Name=YP_002345609.1;Parent=gene515;Dbxref=InterPro:IPR000873,UniProtKB%2FTrEMBL:Q7CGA4,Genbank:YP_002345609.1,GeneID:1173382;gbkey=CDS;product=AMP-binding protein;protein_id=YP_002345609.1;transl_table=11
NC_003143.1	RefSeq	region	582310	582345	.	+	.	ID=id398;Note=PS00455  AMP-binding domain signature.;Dbxref=GeneID:1173382;gbkey=misc_feature
NC_003143.1	RefSeq	gene	583588	583698	.	+	.	ID=gene516;Name=YPO0538;Dbxref=GeneID:1173383;gbkey=Gene;locus_tag=YPO0538
NC_003143.1	RefSeq	CDS	583588	583698	.	+	0	ID=cds498;Name=YP_002345610.1;Parent=gene516;Note=Doubtful CDS with no significant database hits;Dbxref=UniProtKB%2FTrEMBL:Q0WJC8,Genbank:YP_002345610.1,GeneID:1173383;gbkey=CDS;product=hypothetical protein;protein_id=YP_002345610.1;transl_table=11
NC_003143.1	RefSeq	region	583597	583665	.	+	.	ID=id399;Note=1 probable transmembrane helix predicted;Dbxref=GeneID:1173383;gbkey=misc_feature
NC_003143.1	RefSeq	gene	584017	585744	.	+	.	ID=gene517;Name=ilvI;Dbxref=GeneID:1173384;gbkey=Gene;gene=ilvI;locus_tag=YPO0539
NC_003143.1	RefSeq	CDS	584017	585744	.	+	0	ID=cds499;Name=YP_002345611.1;Parent=gene517;Note=catalyzes the formation of 2-acetolactate from pyruvate%2C leucine sensitive;Dbxref=InterPro:IPR000399,InterPro:IPR011766,InterPro:IPR012000,InterPro:IPR012001,InterPro:IPR012846,UniProtKB%2FTrEMBL:Q0WJC7,Genbank:YP_002345611.1,GeneID:1173384;gbkey=CDS;gene=ilvI;product=acetolactate synthase 3 catalytic subunit;protein_id=YP_002345611.1;transl_table=11
NC_003143.1	RefSeq	region	584206	584298	.	+	.	ID=id400;Note=PS00044 Bacterial regulatory proteins%2C lysR family signature.;Dbxref=GeneID:1173384;gbkey=misc_feature;gene=ilvI
NC_003143.1	RefSeq	region	585307	585366	.	+	.	ID=id401;Note=PS00187 Thiamine pyrophosphate enzymes signature.;Dbxref=GeneID:1173384;gbkey=misc_feature;gene=ilvI
NC_003143.1	RefSeq	gene	585747	586241	.	+	.	ID=gene518;Name=ilvH;Dbxref=GeneID:1173385;gbkey=Gene;gene=ilvH;locus_tag=YPO0540
NC_003143.1	RefSeq	CDS	585747	586241	.	+	0	ID=cds500;Name=YP_002345612.1;Parent=gene518;Note=with IlvI catalyzes the formation of 2-acetolactate from pyruvate%2C the small subunit is required for full activity and valine sensitivity%3B E.coli produces 3 isoenzymes of acetolactate synthase which differ in specificity to substrates%2C valine sensitivity and affinity for cofactors%3B also known as acetolactate synthase 3 small subunit;Dbxref=InterPro:IPR002912,InterPro:IPR004789,UniProtKB%2FTrEMBL:Q0WJC6,Genbank:YP_002345612.1,GeneID:1173385;gbkey=CDS;gene=ilvH;product=acetolactate synthase 3 regulatory subunit;protein_id=YP_002345612.1;transl_table=11
NC_003143.1	RefSeq	region	585747	585863	.	+	.	ID=id402;Note=PS00430 TonB-dependent receptor proteins signature 1.;Dbxref=GeneID:1173385;gbkey=misc_feature;gene=ilvH
NC_003143.1	RefSeq	repeat_region	586295	587006	.	+	.	ID=id403;Note=Contains a %27A%27 at nucleotide position 315%7EIS200-like insertion sequence:IS1541;gbkey=repeat_region
NC_003143.1	RefSeq	gene	586440	586898	.	+	.	ID=gene519;Name=tnp;Dbxref=GeneID:1173386;gbkey=Gene;gene=tnp;locus_tag=YPO0541
NC_003143.1	RefSeq	CDS	586440	586898	.	+	0	ID=cds501;Name=YP_002345613.1;Parent=gene519;Dbxref=InterPro:IPR002686,UniProtKB%2FTrEMBL:Q56938,Genbank:YP_002345613.1,GeneID:1173386;gbkey=CDS;gene=tnp;product=transposase for the IS1541 insertion element;protein_id=YP_002345613.1;transl_table=11
NC_003143.1	RefSeq	gene	587220	587336	.	-	.	ID=gene520;Name=YPO0542;Dbxref=GeneID:1173387;gbkey=Gene;locus_tag=YPO0542
NC_003143.1	RefSeq	CDS	587220	587336	.	-	0	ID=cds502;Name=YP_002345614.1;Parent=gene520;Note=Doubtful CDS with no significant database hits;Dbxref=UniProtKB%2FTrEMBL:Q0WJC4,Genbank:YP_002345614.1,GeneID:1173387;gbkey=CDS;product=hypothetical protein;protein_id=YP_002345614.1;transl_table=11
NC_003143.1	RefSeq	gene	587403	588413	.	+	.	ID=gene521;Name=fruR;Dbxref=GeneID:1173388;gbkey=Gene;gene=fruR;gene_synonym=fruC,fruR,shl;locus_tag=YPO0543
NC_003143.1	RefSeq	CDS	587403	588413	.	+	0	ID=cds503;Name=YP_002345615.1;Parent=gene521;Note=binds D-fructose as an inducer%3B involved in regulation of operons for central pathways of carbon metabolism;Dbxref=InterPro:IPR000843,InterPro:IPR001761,InterPro:IPR010982,InterPro:IPR012781,UniProtKB%2FTrEMBL:Q7CGA6,Genbank:YP_002345615.1,GeneID:1173388;gbkey=CDS;gene=fruR;product=DNA-binding transcriptional regulator FruR;protein_id=YP_002345615.1;transl_table=11
NC_003143.1	RefSeq	region	587403	587468	.	+	.	ID=id404;Note=Predicted helix-turn-helix motif with score 1821 %28%2B5.39 SD%29 at aa 1-22%2C sequence MKLDEIARLAGVSRTTASYVIN;Dbxref=GeneID:1173388;gbkey=misc_feature;gene=fruR
NC_003143.1	RefSeq	region	587409	587465	.	+	.	ID=id405;Note=PS00356 Bacterial regulatory proteins%2C lacI family signature.;Dbxref=GeneID:1173388;gbkey=misc_feature;gene=fruR
NC_003143.1	RefSeq	gene	588544	588990	.	-	.	ID=gene522;Name=YPO0544;Dbxref=GeneID:1173389;gbkey=Gene;locus_tag=YPO0544
NC_003143.1	RefSeq	CDS	588544	588990	.	-	0	ID=cds504;Name=YP_002345616.1;Parent=gene522;Dbxref=InterPro:IPR010574,UniProtKB%2FTrEMBL:Q0WJC2,Genbank:YP_002345616.1,GeneID:1173389;gbkey=CDS;product=hypothetical protein;protein_id=YP_002345616.1;transl_table=11
NC_003143.1	RefSeq	gene	590086	590544	.	+	.	ID=gene523;Name=YPO0546;Dbxref=GeneID:1173390;gbkey=Gene;locus_tag=YPO0546
NC_003143.1	RefSeq	CDS	590086	590544	.	+	0	ID=cds505;Name=YP_002345617.1;Parent=gene523;Note=MraZ%3B UPF0040%3B crystal structure shows similarity to AbrB;Dbxref=InterPro:IPR003444,UniProtKB%2FTrEMBL:Q0WJC1,Genbank:YP_002345617.1,GeneID:1173390;gbkey=CDS;product=cell division protein MraZ;protein_id=YP_002345617.1;transl_table=11
NC_003143.1	RefSeq	gene	590547	591509	.	+	.	ID=gene524;Name=mraW;Dbxref=GeneID:1173391;gbkey=Gene;gene=mraW;locus_tag=YPO0547
NC_003143.1	RefSeq	CDS	590547	591509	.	+	0	ID=cds506;Name=YP_002345618.1;Parent=gene524;Dbxref=InterPro:IPR002903,UniProtKB%2FTrEMBL:Q0WJC0,Genbank:YP_002345618.1,GeneID:1173391;gbkey=CDS;gene=mraW;product=S-adenosyl-methyltransferase MraW;protein_id=YP_002345618.1;transl_table=11
NC_003143.1	RefSeq	gene	591506	591823	.	+	.	ID=gene525;Name=ftsL;Dbxref=GeneID:1173392;gbkey=Gene;gene=ftsL;gene_synonym=mraR;locus_tag=YPO0548
NC_003143.1	RefSeq	CDS	591506	591823	.	+	0	ID=cds507;Name=YP_002345619.1;Parent=gene525;Note=membrane bound cell division protein at septum containing leucine zipper motif;Dbxref=InterPro:IPR007082,InterPro:IPR011922,UniProtKB%2FTrEMBL:Q7CGA7,Genbank:YP_002345619.1,GeneID:1173392;gbkey=CDS;gene=ftsL;product=cell division protein FtsL;protein_id=YP_002345619.1;transl_table=11
NC_003143.1	RefSeq	region	591566	591634	.	+	.	ID=id406;Note=1 probable transmembrane helix predicted;Dbxref=GeneID:1173392;gbkey=misc_feature;gene=ftsL
NC_003143.1	RefSeq	gene	591889	593652	.	+	.	ID=gene526;Name=ftsI;Dbxref=GeneID:1173393;gbkey=Gene;gene=ftsI;gene_synonym=pbpB;locus_tag=YPO0549
NC_003143.1	RefSeq	CDS	591889	593652	.	+	0	ID=cds508;Name=YP_002345620.1;Parent=gene526;Dbxref=InterPro:IPR001460,InterPro:IPR005311,InterPro:IPR012338,UniProtKB%2FTrEMBL:Q7CGA8,Genbank:YP_002345620.1,GeneID:1173393;gbkey=CDS;gene=ftsI;product=penicillin-binding protein 3;protein_id=YP_002345620.1;transl_table=11
NC_003143.1	RefSeq	region	591949	592017	.	+	.	ID=id407;Note=1 probable transmembrane helix predicted;Dbxref=GeneID:1173393;gbkey=misc_feature;gene=ftsI
NC_003143.1	RefSeq	gene	593654	595126	.	+	.	ID=gene527;Name=murE;Dbxref=GeneID:1173394;gbkey=Gene;gene=murE;locus_tag=YPO0550
NC_003143.1	RefSeq	CDS	593654	595126	.	+	0	ID=cds509;Name=YP_002345621.1;Parent=gene527;Note=involved in cell wall formation%3B peptidoglycan synthesis%3B cytoplasmic enzyme%3B catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-aceylmuramoyl-l-alanyl-d-glutamate;Dbxref=InterPro:IPR000713,InterPro:IPR004101,InterPro:IPR005761,InterPro:IPR012237,InterPro:IPR013221,InterPro:IPR013838,UniProtKB%2FTrEMBL:Q0WJB7,Genbank:YP_002345621.1,GeneID:1173394;gbkey=CDS;gene=murE;product=UDP-N-acetylmuramoylalanyl-D-glutamate--2%2C6-diaminopimelate ligase;protein_id=YP_002345621.1;transl_table=11
NC_003143.1	RefSeq	gene	595123	596499	.	+	.	ID=gene528;Name=murF;Dbxref=GeneID:1173395;gbkey=Gene;gene=murF;locus_tag=YPO0551
NC_003143.1	RefSeq	CDS	595123	596499	.	+	0	ID=cds510;Name=YP_002345622.1;Parent=gene528;Dbxref=InterPro:IPR000713,InterPro:IPR004101,InterPro:IPR005863,InterPro:IPR012237,InterPro:IPR013221,UniProtKB%2FTrEMBL:Q7CGA9,Genbank:YP_002345622.1,GeneID:1173395;gbkey=CDS;gene=murF;product=UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase;protein_id=YP_002345622.1;transl_table=11
NC_003143.1	RefSeq	gene	596493	597575	.	+	.	ID=gene529;Name=mraY;Dbxref=GeneID:1173396;gbkey=Gene;gene=mraY;gene_synonym=murX;locus_tag=YPO0552
NC_003143.1	RefSeq	CDS	596493	597575	.	+	0	ID=cds511;Name=YP_002345623.1;Parent=gene529;Note=First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan;Dbxref=InterPro:IPR000715,InterPro:IPR003524,UniProtKB%2FTrEMBL:Q0WJB5,Genbank:YP_002345623.1,GeneID:1173396;gbkey=CDS;gene=mraY;product=phospho-N-acetylmuramoyl-pentapeptide-transferase;protein_id=YP_002345623.1;transl_table=11
NC_003143.1	RefSeq	gene	597578	598894	.	+	.	ID=gene530;Name=murD;Dbxref=GeneID:1173397;gbkey=Gene;gene=murD;locus_tag=YPO0553
NC_003143.1	RefSeq	CDS	597578	598894	.	+	0	ID=cds512;Name=YP_002345624.1;Parent=gene530;Note=UDP-N-acetylmuramoylalanine--D-glutamate ligase%3B involved in peptidoglycan biosynthesis%3B cytoplasmic%3B catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine during cell wall formation;Dbxref=InterPro:IPR004101,InterPro:IPR005762,InterPro:IPR006162,InterPro:IPR012237,InterPro:IPR013221,UniProtKB%2FTrEMBL:Q0WJB4,Genbank:YP_002345624.1,GeneID:1173397;gbkey=CDS;gene=murD;product=UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase;protein_id=YP_002345624.1;transl_table=11
NC_003143.1	RefSeq	region	597602	597670	.	+	.	ID=id408;Note=1 probable transmembrane helix predicted;Dbxref=GeneID:1173397;gbkey=misc_feature;gene=murD
NC_003143.1	RefSeq	region	597608	597640	.	+	.	ID=id409;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site.;Dbxref=GeneID:1173397;gbkey=misc_feature;gene=murD
NC_003143.1	RefSeq	gene	598894	600096	.	+	.	ID=gene531;Name=ftsW;Dbxref=GeneID:1173398;gbkey=Gene;gene=ftsW;locus_tag=YPO0554
NC_003143.1	RefSeq	CDS	598894	600096	.	+	0	ID=cds513;Name=YP_002345625.1;Parent=gene531;Note=integral membrane protein involved in stabilizing FstZ ring during cell division;Dbxref=InterPro:IPR001182,InterPro:IPR013437,UniProtKB%2FTrEMBL:Q7CGB0,Genbank:YP_002345625.1,GeneID:1173398;gbkey=CDS;gene=ftsW;product=cell division protein FtsW;protein_id=YP_002345625.1;transl_table=11
NC_003143.1	RefSeq	region	599926	600000	.	+	.	ID=id410;Note=PS00428 Cell cycle proteins ftsW %2F rodA %2F spoVE signature.;Dbxref=GeneID:1173398;gbkey=misc_feature;gene=ftsW
NC_003143.1	RefSeq	gene	600093	601163	.	+	.	ID=gene532;Name=murG;Dbxref=GeneID:1173399;gbkey=Gene;gene=murG;locus_tag=YPO0555
NC_003143.1	RefSeq	CDS	600093	601163	.	+	0	ID=cds514;Name=YP_002345626.1;Parent=gene532;Note=UDP-N-acetylglucosamine--N-acetylmuramyl-%28pentapeptide%29 pyrophosphoryl-undecaprenol N-acetylglucosamine transferase%3B involved in cell wall formation%3B inner membrane-associated%3B last step of peptidoglycan synthesis;Dbxref=InterPro:IPR004276,InterPro:IPR006009,InterPro:IPR007235,UniProtKB%2FTrEMBL:Q0WJB2,Genbank:YP_002345626.1,GeneID:1173399;gbkey=CDS;gene=murG;product=undecaprenyldiphospho-muramoylpentapeptide beta-N- acetylglucosaminyltransferase;protein_id=YP_002345626.1;transl_table=11
NC_003143.1	RefSeq	gene	601301	602776	.	+	.	ID=gene533;Name=murC;Dbxref=GeneID:1173400;gbkey=Gene;gene=murC;locus_tag=YPO0556
NC_003143.1	RefSeq	CDS	601301	602776	.	+	0	ID=cds515;Name=YP_002345627.1;Parent=gene533;Note=Catalyzes the formation of UDP-N-acetylmuramoyl-L-alanine from UDP-N-acetylmuramate and L-alanine in peptidoglycan synthesis;Dbxref=InterPro:IPR000713,InterPro:IPR004101,InterPro:IPR005758,InterPro:IPR012237,InterPro:IPR013221,UniProtKB%2FTrEMBL:Q0WJB1,Genbank:YP_002345627.1,GeneID:1173400;gbkey=CDS;gene=murC;product=UDP-N-acetylmuramate--L-alanine ligase;protein_id=YP_002345627.1;transl_table=11
NC_003143.1	RefSeq	region	601361	601420	.	+	.	ID=id411;Note=1 probable transmembrane helix predicted;Dbxref=GeneID:1173400;gbkey=misc_feature;gene=murC
NC_003143.1	RefSeq	gene	602769	603689	.	+	.	ID=gene534;Name=ddl;Dbxref=GeneID:1173401;gbkey=Gene;gene=ddl;gene_synonym=ddlB;locus_tag=YPO0557
NC_003143.1	RefSeq	CDS	602769	603689	.	+	0	ID=cds516;Name=YP_002345628.1;Parent=gene534;Note=D-alanine--D-alanine ligase%3B DdlA%3B DdlB%3B cytoplasmic%3B catalyzes the formation of D-alanyl-D-alanine from two D-alanines in peptidoglycan synthesis%3B there are two forms of this enzyme in Escherichia coli;Dbxref=InterPro:IPR000291,InterPro:IPR005905,InterPro:IPR011095,InterPro:IPR011127,InterPro:IPR011761,InterPro:IPR013816,InterPro:IPR013817,UniProtKB%2FTrEMBL:Q0WJB0,Genbank:YP_002345628.1,GeneID:1173401;gbkey=CDS;gene=ddl;product=D-alanine--D-alanine ligase;protein_id=YP_002345628.1;transl_table=11
NC_003143.1	RefSeq	region	602955	602990	.	+	.	ID=id412;Note=PS00843 D-alanine--D-alanine ligase signature 1.;Dbxref=GeneID:1173401;gbkey=misc_feature;gene=ddl
NC_003143.1	RefSeq	region	603510	603596	.	+	.	ID=id413;Note=PS00844 D-alanine--D-alanine ligase signature 2.;Dbxref=GeneID:1173401;gbkey=misc_feature;gene=ddl
NC_003143.1	RefSeq	gene	603691	604518	.	+	.	ID=gene535;Name=ftsQ;Dbxref=GeneID:1173402;gbkey=Gene;gene=ftsQ;locus_tag=YPO0558
NC_003143.1	RefSeq	CDS	603691	604518	.	+	0	ID=cds517;Name=YP_002345629.1;Parent=gene535;Note=involved in septum formation;Dbxref=InterPro:IPR005548,InterPro:IPR013685,UniProtKB%2FTrEMBL:Q7CGB1,Genbank:YP_002345629.1,GeneID:1173402;gbkey=CDS;gene=ftsQ;product=cell division protein FtsQ;protein_id=YP_002345629.1;transl_table=11
NC_003143.1	RefSeq	region	603766	603834	.	+	.	ID=id414;Note=1 probable transmembrane helix predicted;Dbxref=GeneID:1173402;gbkey=misc_feature;gene=ftsQ
NC_003143.1	RefSeq	gene	604545	605801	.	+	.	ID=gene536;Name=ftsA;Dbxref=GeneID:1173403;gbkey=Gene;gene=ftsA;locus_tag=YPO0559
NC_003143.1	RefSeq	CDS	604545	605801	.	+	0	ID=cds518;Name=YP_002345630.1;Parent=gene536;Note=ATP-binding involved in recruitment of FtsK to Z ring%3B essential cell division protein%3B colocalizes with FtsZ through direct interaction to the septal ring structure%3B structurally similar to eukaryotic actin%3B binds directly to the cell membrane;Dbxref=InterPro:IPR003494,UniProtKB%2FTrEMBL:Q7CGB2,Genbank:YP_002345630.1,GeneID:1173403;gbkey=CDS;gene=ftsA;product=cell division protein FtsA;protein_id=YP_002345630.1;transl_table=11
NC_003143.1	RefSeq	gene	605874	607025	.	+	.	ID=gene537;Name=ftsZ;Dbxref=GeneID:1173404;gbkey=Gene;gene=ftsZ;gene_synonym=sfiB,sulB;locus_tag=YPO0560
NC_003143.1	RefSeq	CDS	605874	607025	.	+	0	ID=cds519;Name=YP_002345631.1;Parent=gene537;Note=GTPase%3B similar structure to tubulin%3B forms ring-shaped polymers at the site of cell division%3B other proteins such as FtsA%2C ZipA%2C and ZapA%2C interact with and regulate FtsZ function;Dbxref=InterPro:IPR000158,InterPro:IPR003008,InterPro:IPR008280,UniProtKB%2FTrEMBL:Q7CGB3,Genbank:YP_002345631.1,GeneID:1173404;gbkey=CDS;gene=ftsZ;product=cell division protein FtsZ;protein_id=YP_002345631.1;transl_table=11
NC_003143.1	RefSeq	region	606000	606104	.	+	.	ID=id415;Note=PS01134 FtsZ protein signature 1.;Dbxref=GeneID:1173404;gbkey=misc_feature;gene=ftsZ
NC_003143.1	RefSeq	region	606159	606224	.	+	.	ID=id416;Note=PS01135 FtsZ protein signature 2.;Dbxref=GeneID:1173404;gbkey=misc_feature;gene=ftsZ
NC_003143.1	RefSeq	gene	607125	608045	.	+	.	ID=gene538;Name=lpxC;Dbxref=GeneID:1173405;gbkey=Gene;gene=lpxC;gene_synonym=envA,lpxC;locus_tag=YPO0561
NC_003143.1	RefSeq	CDS	607125	608045	.	+	0	ID=cds520;Name=YP_002345632.1;Parent=gene538;Note=zinc-dependent%3B catalyzes the deacetylation of UDP-%283-O-acyl%29-N-acetylglucosamine to UDP-3-O-%283-hydroxytetradecanoyl%29-glucosamine in the second step of lipid A biosynthesis;Dbxref=InterPro:IPR004463,UniProtKB%2FTrEMBL:Q0WJA6,Genbank:YP_002345632.1,GeneID:1173405;gbkey=CDS;gene=lpxC;product=UDP-3-O-%5B3-hydroxymyristoyl%5D N-acetylglucosamine deacetylase;protein_id=YP_002345632.1;transl_table=11
NC_003143.1	RefSeq	gene	608212	608742	.	-	.	ID=gene539;Name=YPO0562;Dbxref=GeneID:1173406;gbkey=Gene;locus_tag=YPO0562
NC_003143.1	RefSeq	CDS	608212	608742	.	-	0	ID=cds521;Name=YP_002345633.1;Parent=gene539;Dbxref=UniProtKB%2FTrEMBL:Q7CGB4,Genbank:YP_002345633.1,GeneID:1173406;gbkey=CDS;product=hypothetical protein;protein_id=YP_002345633.1;transl_table=11
NC_003143.1	RefSeq	gene	608765	609298	.	+	.	ID=gene540;Name=YPO0563;Dbxref=GeneID:1173407;gbkey=Gene;locus_tag=YPO0563
NC_003143.1	RefSeq	CDS	608765	609298	.	+	0	ID=cds522;Name=YP_002345634.1;Parent=gene540;Note=secM translational pause allows for the initiation of secA translation;Dbxref=InterPro:IPR009502,UniProtKB%2FTrEMBL:Q0WJA4,Genbank:YP_002345634.1,GeneID:1173407;gbkey=CDS;product=SecA regulator SecM;protein_id=YP_002345634.1;transl_table=11
NC_003143.1	RefSeq	region	608807	608875	.	+	.	ID=id417;Note=1 probable transmembrane helix predicted;Dbxref=GeneID:1173407;gbkey=misc_feature
NC_003143.1	RefSeq	gene	609376	612090	.	+	.	ID=gene541;Name=secA;Dbxref=GeneID:1173408;gbkey=Gene;gene=secA;gene_synonym=pea,prlD,secA;locus_tag=YPO0564
NC_003143.1	RefSeq	CDS	609376	612090	.	+	0	ID=cds523;Name=YP_002345635.1;Parent=gene541;Note=functions in protein export%3B can interact with acidic membrane phospholipids and the SecYEG protein complex%3B binds to preproteins%3B binds to ATP and undergoes a conformational change to promote membrane insertion of SecA%2Fbound preprotein%3B ATP hydrolysis appears to drive release of the preprotein from SecA and deinsertion of SecA from the membrane%3B additional proteins SecD%2FF%2FYajC aid SecA recycling%3B exists in an equilibrium between monomers and dimers%3B may possibly form higher order oligomers%3B proteins in this cluster correspond SecA1%3B SecA2 is not essential and seems to play a role in secretion of a subset of proteins;Dbxref=InterPro:IPR000185,InterPro:IPR004027,InterPro:IPR011115,InterPro:IPR011116,InterPro:IPR011130,InterPro:IPR014018,InterPro:IPR014021,UniProtKB%2FTrEMBL:Q7CGB6,Genbank:YP_002345635.1,GeneID:1173408;gbkey=CDS;gene=secA;product=preprotein translocase subunit SecA;protein_id=YP_002345635.1;transl_table=11
NC_003143.1	RefSeq	region	610873	610920	.	+	.	ID=id418;Note=PS01312 Protein secA signatures.;Dbxref=GeneID:1173408;gbkey=misc_feature;gene=secA
NC_003143.1	RefSeq	gene	612385	612771	.	+	.	ID=gene542;Name=mutT;Dbxref=GeneID:1173409;gbkey=Gene;gene=mutT;locus_tag=YPO0565
NC_003143.1	RefSeq	CDS	612385	612771	.	+	0	ID=cds524;Name=YP_002345636.1;Parent=gene542;Dbxref=InterPro:IPR000086,InterPro:IPR002667,InterPro:IPR003561,UniProtKB%2FTrEMBL:Q7CGB7,Genbank:YP_002345636.1,GeneID:1173409;gbkey=CDS;gene=mutT;product=nucleoside triphosphate pyrophosphohydrolase;protein_id=YP_002345636.1;transl_table=11
NC_003143.1	RefSeq	region	612496	612555	.	+	.	ID=id419;Note=PS00893 mutT domain signature.;Dbxref=GeneID:1173409;gbkey=misc_feature;gene=mutT
NC_003143.1	RefSeq	repeat_region	612841	612966	.	+	.	ID=id420;Note=truncated insertion sequence:IS1541;gbkey=repeat_region
NC_003143.1	RefSeq	repeat_region	612967	614920	.	-	.	ID=id421;Note=insertion sequence:IS100;gbkey=repeat_region
NC_003143.1	RefSeq	repeat_region	612967	612994	.	+	.	ID=id422;Note=IS100 inverted repeat;gbkey=repeat_region
NC_003143.1	RefSeq	gene	613033	613815	.	-	.	ID=gene543;Name=YPO0566;Note=ypmt1.57c;Dbxref=GeneID:1173410;gbkey=Gene;locus_tag=YPO0566
NC_003143.1	RefSeq	CDS	613033	613815	.	-	0	ID=cds525;Name=YP_002345637.1;Parent=gene543;Dbxref=InterPro:IPR001270,InterPro:IPR002611,InterPro:IPR003593,UniProtKB%2FTrEMBL:Q7ARK4,Genbank:YP_002345637.1,GeneID:1173410;gbkey=CDS;product=transposase%2FIS protein;protein_id=YP_002345637.1;transl_table=11
NC_003143.1	RefSeq	region	613465	613488	.	-	.	ID=id423;Note=PS00017 ATP%2FGTP-binding site motif A %28P-loop%29.;Dbxref=GeneID:1173410;gbkey=misc_feature
NC_003143.1	RefSeq	gene	613812	614834	.	-	.	ID=gene544;Name=y1093;Dbxref=GeneID:1173411;gbkey=Gene;gene=y1093;gene_synonym=ypmt1;locus_tag=YPO0567
NC_003143.1	RefSeq	CDS	613812	614834	.	-	0	ID=cds526;Name=YP_002345638.1;Parent=gene544;Dbxref=InterPro:IPR001584,InterPro:IPR006120,InterPro:IPR009057,InterPro:IPR012287,InterPro:IPR012337,UniProtKB%2FTrEMBL:Q7ARN5,Genbank:YP_002345638.1,GeneID:1173411;gbkey=CDS;gene=y1093;product=transposase for insertion sequence IS100;protein_id=YP_002345638.1;transl_table=11
NC_003143.1	RefSeq	region	614718	614783	.	-	.	ID=id424;Note=Predicted helix-turn-helix motif with score 2147 %28%2B6.50 SD%29 at aa 18-39%2C sequence MSSRAIARELGISRNTVKRYLQ;Dbxref=GeneID:1173411;gbkey=misc_feature;gene=y1093
NC_003143.1	RefSeq	repeat_region	614893	614920	.	-	.	ID=id425;Note=IS100 inverted repeat;gbkey=repeat_region
NC_003143.1	RefSeq	gene	615113	615481	.	-	.	ID=gene545;Name=YPO0568;Dbxref=GeneID:1173412;gbkey=Gene;locus_tag=YPO0568
NC_003143.1	RefSeq	CDS	615113	615481	.	-	0	ID=cds527;Name=YP_002345639.1;Parent=gene545;Dbxref=InterPro:IPR011637,UniProtKB%2FTrEMBL:Q0WJ99,Genbank:YP_002345639.1,GeneID:1173412;gbkey=CDS;product=hypothetical protein;protein_id=YP_002345639.1;transl_table=11
NC_003143.1	RefSeq	gene	615812	616096	.	-	.	ID=gene546;Name=YPO0569;Dbxref=GeneID:1173413;gbkey=Gene;locus_tag=YPO0569
NC_003143.1	RefSeq	CDS	615812	616096	.	-	0	ID=cds528;Name=YP_002345640.1;Parent=gene546;Dbxref=UniProtKB%2FTrEMBL:Q7CGC0,Genbank:YP_002345640.1,GeneID:1173413;gbkey=CDS;product=hypothetical protein;protein_id=YP_002345640.1;transl_table=11
NC_003143.1	RefSeq	gene	616093	616488	.	-	.	ID=gene547;Name=YPO0569a;Dbxref=GeneID:1173414;gbkey=Gene;locus_tag=YPO0569a
NC_003143.1	RefSeq	CDS	616093	616488	.	-	0	ID=cds529;Name=YP_002345641.1;Parent=gene547;Dbxref=InterPro:IPR011309,UniProtKB%2FTrEMBL:Q7CGC1,Genbank:YP_002345641.1,GeneID:1173414;gbkey=CDS;product=hypothetical protein;protein_id=YP_002345641.1;transl_table=11
NC_003143.1	RefSeq	gene	616491	616796	.	-	.	ID=gene548;Name=yqjD;Dbxref=GeneID:1173415;gbkey=Gene;gene=yqjD;locus_tag=YPO0570
NC_003143.1	RefSeq	CDS	616491	616796	.	-	0	ID=cds530;Name=YP_002345642.1;Parent=gene548;Dbxref=InterPro:IPR010279,UniProtKB%2FTrEMBL:Q7CGC2,Genbank:YP_002345642.1,GeneID:1173415;gbkey=CDS;gene=yqjD;product=hypothetical protein;protein_id=YP_002345642.1;transl_table=11
NC_003143.1	RefSeq	region	616503	616553	.	-	.	ID=id426;Note=1 probable transmembrane helix predicted;Dbxref=GeneID:1173415;gbkey=misc_feature;gene=yqjD
NC_003143.1	RefSeq	gene	616801	616947	.	-	.	ID=gene549;Name=YPO0571;Dbxref=GeneID:1173416;gbkey=Gene;locus_tag=YPO0571
NC_003143.1	RefSeq	CDS	616801	616947	.	-	0	ID=cds531;Name=YP_002345643.1;Parent=gene549;Note=No significant database hits;Dbxref=UniProtKB%2FTrEMBL:Q7CGC3,Genbank:YP_002345643.1,GeneID:1173416;gbkey=CDS;product=hypothetical protein;protein_id=YP_002345643.1;transl_table=11
NC_003143.1	RefSeq	gene	616951	617331	.	-	.	ID=gene550;Name=YPO0572;Dbxref=GeneID:1173417;gbkey=Gene;locus_tag=YPO0572
NC_003143.1	RefSeq	CDS	616951	617331	.	-	0	ID=cds532;Name=YP_002345644.1;Parent=gene550;Dbxref=InterPro:IPR009468,UniProtKB%2FTrEMBL:Q0WJ94,Genbank:YP_002345644.1,GeneID:1173417;gbkey=CDS;product=hypothetical protein;protein_id=YP_002345644.1;transl_table=11
NC_003143.1	RefSeq	gene	617557	617946	.	-	.	ID=gene551;Name=YPO0573;Dbxref=GeneID:1173418;gbkey=Gene;locus_tag=YPO0573
NC_003143.1	RefSeq	CDS	617557	617946	.	-	0	ID=cds533;Name=YP_002345645.1;Parent=gene551;Dbxref=UniProtKB%2FTrEMBL:Q7CGC4,Genbank:YP_002345645.1,GeneID:1173418;gbkey=CDS;product=hypothetical protein;protein_id=YP_002345645.1;transl_table=11
NC_003143.1	RefSeq	region	617842	617907	.	-	.	ID=id427;Note=1 probable transmembrane helix predicted;Dbxref=GeneID:1173418;gbkey=misc_feature
NC_003143.1	RefSeq	gene	617943	618641	.	-	.	ID=gene552;Name=yqjA;Dbxref=GeneID:1173419;gbkey=Gene;gene=yqjA;locus_tag=YPO0574
NC_003143.1	RefSeq	CDS	617943	618641	.	-	0	ID=cds534;Name=YP_002345646.1;Parent=gene552;Dbxref=UniProtKB%2FTrEMBL:Q7CGC5,Genbank:YP_002345646.1,GeneID:1173419;gbkey=CDS;gene=yqjA;product=DedA family membrane protein;protein_id=YP_002345646.1;transl_table=11
NC_003143.1	RefSeq	gene	618919	619473	.	-	.	ID=gene553;Name=YPO0575;Dbxref=GeneID:1173420;gbkey=Gene;locus_tag=YPO0575
NC_003143.1	RefSeq	CDS	618919	619473	.	-	0	ID=cds535;Name=YP_002345647.1;Parent=gene553;Note=Doubtful CDS. No significant database matches;Dbxref=UniProtKB%2FTrEMBL:Q0WJ91,Genbank:YP_002345647.1,GeneID:1173420;gbkey=CDS;product=lipoprotein;protein_id=YP_002345647.1;transl_table=11
NC_003143.1	RefSeq	region	619414	619446	.	-	.	ID=id428;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site.;Dbxref=GeneID:1173420;gbkey=misc_feature
NC_003143.1	RefSeq	gene	619701	620495	.	-	.	ID=gene554;Name=exuR;Dbxref=GeneID:1173421;gbkey=Gene;gene=exuR;locus_tag=YPO0576
NC_003143.1	RefSeq	CDS	619701	620495	.	-	0	ID=cds536;Name=YP_002345648.1;Parent=gene554;Note=regulates the exuT%2C uxaCA and uxuRAB operons which encode genes involved in hexuronate utilization.;Dbxref=InterPro:IPR000524,InterPro:IPR011711,UniProtKB%2FTrEMBL:Q0WJ90,Genbank:YP_002345648.1,GeneID:1173421;gbkey=CDS;gene=exuR;product=DNA-binding transcriptional repressor ExuR;protein_id=YP_002345648.1;transl_table=11
NC_003143.1	RefSeq	region	620328	620402	.	-	.	ID=id429;Note=PS00043 Bacterial regulatory proteins%2C gntR family signature.;Dbxref=GeneID:1173421;gbkey=misc_feature;gene=exuR
NC_003143.1	RefSeq	gene	620758	622062	.	-	.	ID=gene555;Name=exuT;Dbxref=GeneID:1173422;gbkey=Gene;gene=exuT;locus_tag=YPO0577
NC_003143.1	RefSeq	CDS	620758	622062	.	-	0	ID=cds537;Name=YP_002345649.1;Parent=gene555;Dbxref=InterPro:IPR004744,InterPro:IPR007114,InterPro:IPR011701,UniProtKB%2FTrEMBL:Q7CGC6,Genbank:YP_002345649.1,GeneID:1173422;gbkey=CDS;gene=exuT;product=ExuT transport protein;protein_id=YP_002345649.1;transl_table=11
NC_003143.1	RefSeq	region	622148	622207	.	+	.	ID=id430;Note=1 probable transmembrane helix predicted;gbkey=misc_feature
NC_003143.1	RefSeq	gene	622807	624216	.	+	.	ID=gene556;Name=uxaC;Dbxref=GeneID:1173424;gbkey=Gene;gene=uxaC;locus_tag=YPO0579
NC_003143.1	RefSeq	CDS	622807	624216	.	+	0	ID=cds538;Name=YP_002345651.1;Parent=gene556;Note=catalyzes the interconversion of D-glucuronate to D-fructuronate or D-galacturonate to D-tagaturonate%3B functions in glucuronic and galacturonic metabolism;Dbxref=InterPro:IPR003766,UniProtKB%2FTrEMBL:Q0WJ87,Genbank:YP_002345651.1,GeneID:1173424;gbkey=CDS;gene=uxaC;product=glucuronate isomerase;protein_id=YP_002345651.1;transl_table=11
NC_003143.1	RefSeq	gene	624415	625866	.	+	.	ID=gene557;Name=uxaB;Dbxref=GeneID:1173425;gbkey=Gene;gene=uxaB;locus_tag=YPO0580
NC_003143.1	RefSeq	CDS	624415	625866	.	+	0	ID=cds539;Name=YP_002345652.1;Parent=gene557;Note=catalyzes the formation of D-tagaturonate from D-altronate;Dbxref=InterPro:IPR008927,InterPro:IPR013118,InterPro:IPR013131,UniProtKB%2FTrEMBL:Q0WJ86,Genbank:YP_002345652.1,GeneID:1173425;gbkey=CDS;gene=uxaB;product=altronate oxidoreductase;protein_id=YP_002345652.1;transl_table=11
NC_003143.1	RefSeq	gene	625877	627367	.	+	.	ID=gene558;Name=uxaA;Dbxref=GeneID:1173426;gbkey=Gene;gene=uxaA;locus_tag=YPO0581
NC_003143.1	RefSeq	CDS	625877	627367	.	+	0	ID=cds540;Name=YP_002345653.1;Parent=gene558;Dbxref=InterPro:IPR007392,InterPro:IPR013974,UniProtKB%2FTrEMBL:Q7CGC7,Genbank:YP_002345653.1,GeneID:1173426;gbkey=CDS;gene=uxaA;product=altronate hydrolase;protein_id=YP_002345653.1;transl_table=11
NC_003143.1	RefSeq	gene	627520	628050	.	+	.	ID=gene559;Name=YPO0582;Dbxref=GeneID:1173427;gbkey=Gene;locus_tag=YPO0582
NC_003143.1	RefSeq	CDS	627520	628050	.	+	0	ID=cds541;Name=YP_002345654.1;Parent=gene559;Dbxref=UniProtKB%2FTrEMBL:Q7CGC8,Genbank:YP_002345654.1,GeneID:1173427;gbkey=CDS;product=hypothetical protein;protein_id=YP_002345654.1;transl_table=11
NC_003143.1	RefSeq	repeat_region	628060	628771	.	-	.	ID=id431;Note=Contains a %27G%27 at nucleotide position 315%7EIS200-like insertion sequence:IS1541;gbkey=repeat_region
NC_003143.1	RefSeq	gene	628168	628626	.	-	.	ID=gene560;Name=tnp;Dbxref=GeneID:1173428;gbkey=Gene;gene=tnp;locus_tag=YPO0583
NC_003143.1	RefSeq	CDS	628168	628626	.	-	0	ID=cds542;Name=YP_002345655.1;Parent=gene560;Dbxref=InterPro:IPR002686,UniProtKB%2FTrEMBL:Q74YM6,Genbank:YP_002345655.1,GeneID:1173428;gbkey=CDS;gene=tnp;product=transposase for the IS1541 insertion element;protein_id=YP_002345655.1;transl_table=11
NC_003143.1	RefSeq	gene	628827	630095	.	-	.	ID=gene561;Name=YPO0584;Dbxref=GeneID:1173429;gbkey=Gene;locus_tag=YPO0584
NC_003143.1	RefSeq	CDS	628827	630095	.	-	0	ID=cds543;Name=YP_002345656.1;Parent=gene561;Note=involved in the import of serine and threonine coupled with the import of sodium;Dbxref=InterPro:IPR001991,UniProtKB%2FTrEMBL:Q0WJ82,Genbank:YP_002345656.1,GeneID:1173429;gbkey=CDS;product=serine%2Fthreonine transporter SstT;protein_id=YP_002345656.1;transl_table=11
NC_003143.1	RefSeq	region	629133	629165	.	-	.	ID=id432;Note=PS00435 Peroxidases proximal heme-ligand signature.;Dbxref=GeneID:1173429;gbkey=misc_feature
NC_003143.1	RefSeq	gene	630618	631613	.	-	.	ID=gene562;Name=YPO0585;Dbxref=GeneID:1173430;gbkey=Gene;locus_tag=YPO0585
NC_003143.1	RefSeq	CDS	630618	631613	.	-	0	ID=cds544;Name=YP_002345657.1;Parent=gene562;Dbxref=InterPro:IPR000683,UniProtKB%2FTrEMBL:Q74RW1,Genbank:YP_002345657.1,GeneID:1173430;gbkey=CDS;product=MocA family oxidoreductase;protein_id=YP_002345657.1;transl_table=11
NC_003143.1	RefSeq	gene	631816	632325	.	-	.	ID=gene563;Name=YPO0586;Dbxref=GeneID:1173431;gbkey=Gene;locus_tag=YPO0586
NC_003143.1	RefSeq	CDS	631816	632325	.	-	0	ID=cds545;Name=YP_002345658.1;Parent=gene563;Dbxref=InterPro:IPR002725,UniProtKB%2FTrEMBL:Q7CGD0,Genbank:YP_002345658.1,GeneID:1173431;gbkey=CDS;product=hypothetical protein;protein_id=YP_002345658.1;transl_table=11
NC_003143.1	RefSeq	gene	632564	635548	.	-	.	ID=gene564;Name=YPO0587;Dbxref=GeneID:1173432;gbkey=Gene;locus_tag=YPO0587
NC_003143.1	RefSeq	CDS	632564	635548	.	-	0	ID=cds546;Name=YP_002345659.1;Parent=gene564;Dbxref=InterPro:IPR004899,InterPro:IPR005546,InterPro:IPR006315,InterPro:IPR011050,UniProtKB%2FTrEMBL:Q9F286,Genbank:YP_002345659.1,GeneID:1173432;gbkey=CDS;product=autotransporter protein;protein_id=YP_002345659.1;transl_table=11
NC_003143.1	RefSeq	gene	636017	637204	.	+	.	ID=gene565;Name=YPO0588;Dbxref=GeneID:1173433;gbkey=Gene;locus_tag=YPO0588
NC_003143.1	RefSeq	CDS	636017	637204	.	+	0	ID=cds547;Name=YP_002345660.1;Parent=gene565;Dbxref=InterPro:IPR002052,InterPro:IPR007848,UniProtKB%2FTrEMBL:Q0WJ78,Genbank:YP_002345660.1,GeneID:1173433;gbkey=CDS;product=methyltransferase;protein_id=YP_002345660.1;transl_table=11
NC_003143.1	RefSeq	region	636923	636943	.	+	.	ID=id433;Note=PS00092 N-6 Adenine-specific DNA methylases signature.;Dbxref=GeneID:1173433;gbkey=misc_feature
NC_003143.1	RefSeq	gene	637320	639341	.	-	.	ID=gene566;Name=fadH;Dbxref=GeneID:1173434;gbkey=Gene;gene=fadH;gene_synonym=fadH1;locus_tag=YPO0589
NC_003143.1	RefSeq	CDS	637320	639341	.	-	0	ID=cds548;Name=YP_002345661.1;Parent=gene566;Dbxref=InterPro:IPR000759,InterPro:IPR001100,InterPro:IPR001155,InterPro:IPR001327,InterPro:IPR013027,UniProtKB%2FTrEMBL:Q0WJ77,Genbank:YP_002345661.1,GeneID:1173434;gbkey=CDS;gene=fadH;product=2%2C4-dienoyl-CoA reductase;protein_id=YP_002345661.1;transl_table=11
NC_003143.1	RefSeq	region	639341	698939	.	-	.	ID=id434;Note=Possible pathogenicity island%2C PPI-1. Shows some characteristics of a pathogenicity island. Contains homologues of pathogenicity island proteins%2C regulators%2Cresistance proteins%2C eukaryotic proteins etc. and is situated proximal to a tRNA;gbkey=misc_feature;gene=fadH
NC_003143.1	RefSeq	gene	639554	640123	.	-	.	ID=gene567;Name=hdeD;Dbxref=GeneID:1173435;gbkey=Gene;gene=hdeD;locus_tag=YPO0590
NC_003143.1	RefSeq	CDS	639554	640123	.	-	0	ID=cds549;Name=YP_002345662.1;Parent=gene567;Dbxref=InterPro:IPR006187,UniProtKB%2FTrEMBL:Q7CGD2,Genbank:YP_002345662.1,GeneID:1173435;gbkey=CDS;gene=hdeD;product=acid-resistance membrane protein;protein_id=YP_002345662.1;transl_table=11
NC_003143.1	RefSeq	gene	640514	642013	.	-	.	ID=gene568;Name=YPO0592;Dbxref=GeneID:1173437;gbkey=Gene;locus_tag=YPO0592
NC_003143.1	RefSeq	CDS	640514	642013	.	-	0	ID=cds550;Name=YP_002345664.1;Parent=gene568;Dbxref=InterPro:IPR000719,InterPro:IPR008266,InterPro:IPR011009,UniProtKB%2FTrEMBL:Q7CGD3,Genbank:YP_002345664.1,GeneID:1173437;gbkey=CDS;product=kinase protein;protein_id=YP_002345664.1;transl_table=11
NC_003143.1	RefSeq	region	641477	641515	.	-	.	ID=id435;Note=PS00109 Tyrosine protein kinases specific active-site signature.;Dbxref=GeneID:1173437;gbkey=misc_feature
NC_003143.1	RefSeq	gene	642045	643778	.	-	.	ID=gene569;Name=YPO0593;Dbxref=GeneID:1173438;gbkey=Gene;locus_tag=YPO0593
NC_003143.1	RefSeq	CDS	642045	643778	.	-	0	ID=cds551;Name=YP_002345665.1;Parent=gene569;Dbxref=InterPro:IPR001932,UniProtKB%2FTrEMBL:Q7CGD4,Genbank:YP_002345665.1,GeneID:1173438;gbkey=CDS;product=hypothetical protein;protein_id=YP_002345665.1;transl_table=11
NC_003143.1	RefSeq	gene	643834	644817	.	-	.	ID=gene570;Name=YPO0594;Dbxref=GeneID:1173439;gbkey=Gene;locus_tag=YPO0594
NC_003143.1	RefSeq	CDS	643834	644817	.	-	0	ID=cds552;Name=YP_002345666.1;Parent=gene570;Dbxref=InterPro:IPR002035,UniProtKB%2FTrEMBL:Q7CGD5,Genbank:YP_002345666.1,GeneID:1173439;gbkey=CDS;product=hypothetical protein;protein_id=YP_002345666.1;transl_table=11
NC_003143.1	RefSeq	gene	644919	645557	.	-	.	ID=gene571;Name=YPO0595;Dbxref=GeneID:1173440;gbkey=Gene;locus_tag=YPO0595
NC_003143.1	RefSeq	CDS	644919	645557	.	-	0	ID=cds553;Name=YP_002345667.1;Parent=gene571;Dbxref=InterPro:IPR002035,InterPro:IPR011392,UniProtKB%2FTrEMBL:Q0WJ71,Genbank:YP_002345667.1,GeneID:1173440;gbkey=CDS;product=hypothetical protein;protein_id=YP_002345667.1;transl_table=11
NC_003143.1	RefSeq	gene	645559	646200	.	-	.	ID=gene572;Name=terX;Dbxref=GeneID:1173441;gbkey=Gene;gene=terX;locus_tag=YPO0596
NC_003143.1	RefSeq	CDS	645559	646200	.	-	0	ID=cds554;Name=YP_002345668.1;Parent=gene572;Dbxref=InterPro:IPR003325,UniProtKB%2FTrEMBL:Q7CGD6,Genbank:YP_002345668.1,GeneID:1173441;gbkey=CDS;gene=terX;product=tellurium resistance protein;protein_id=YP_002345668.1;transl_table=11
NC_003143.1	RefSeq	gene	646233	646871	.	-	.	ID=gene573;Name=terY;Dbxref=GeneID:1173442;gbkey=Gene;gene=terY;locus_tag=YPO0597
NC_003143.1	RefSeq	CDS	646233	646871	.	-	0	ID=cds555;Name=YP_002345669.1;Parent=gene573;Dbxref=InterPro:IPR002035,InterPro:IPR011392,UniProtKB%2FTrEMBL:Q7CGD7,Genbank:YP_002345669.1,GeneID:1173442;gbkey=CDS;gene=terY;product=tellurium resistance protein;protein_id=YP_002345669.1;transl_table=11
NC_003143.1	RefSeq	gene	647586	649274	.	+	.	ID=gene574;Name=YPO0598;Dbxref=GeneID:1173443;gbkey=Gene;locus_tag=YPO0598
NC_003143.1	RefSeq	CDS	647586	649274	.	+	0	ID=cds556;Name=YP_002345670.1;Parent=gene574;Dbxref=InterPro:IPR005565,InterPro:IPR013686,UniProtKB%2FTrEMBL:Q7CGD8,Genbank:YP_002345670.1,GeneID:1173443;gbkey=CDS;product=hemolysin activator protein;protein_id=YP_002345670.1;transl_table=11
NC_003143.1	RefSeq	gene	649319	659206	.	+	.	ID=gene575;Name=YPO0599;Dbxref=GeneID:1173444;gbkey=Gene;locus_tag=YPO0599
NC_003143.1	RefSeq	CDS	649319	659206	.	+	0	ID=cds557;Name=YP_002345671.1;Parent=gene575;Dbxref=InterPro:IPR003439,InterPro:IPR008619,InterPro:IPR008638,InterPro:IPR010069,InterPro:IPR011050,UniProtKB%2FTrEMBL:Q7CGD9,Genbank:YP_002345671.1,GeneID:1173444;gbkey=CDS;product=adhesin;protein_id=YP_002345671.1;transl_table=11
NC_003143.1	RefSeq	region	651038	651061	.	+	.	ID=id436;Note=PS00017 ATP%2FGTP-binding site motif A %28P-loop%29.;Dbxref=GeneID:1173444;gbkey=misc_feature
NC_003143.1	RefSeq	gene	659203	659436	.	+	.	ID=gene576;Name=YPO0600;Dbxref=GeneID:1173445;gbkey=Gene;locus_tag=YPO0600
NC_003143.1	RefSeq	CDS	659203	659436	.	+	0	ID=cds558;Name=YP_002345672.1;Parent=gene576;Note=Poor database matches. Doubtful CDS;Dbxref=UniProtKB%2FTrEMBL:Q74RU7,Genbank:YP_002345672.1,GeneID:1173445;gbkey=CDS;product=hypothetical protein;protein_id=YP_002345672.1;transl_table=11
NC_003143.1	RefSeq	gene	659702	659929	.	+	.	ID=gene577;Name=YPO0601;Dbxref=GeneID:1173446;gbkey=Gene;locus_tag=YPO0601
NC_003143.1	RefSeq	CDS	659702	659929	.	+	0	ID=cds559;Name=YP_002345673.1;Parent=gene577;Dbxref=UniProtKB%2FTrEMBL:Q7CGE0,Genbank:YP_002345673.1,GeneID:1173446;gbkey=CDS;product=hypothetical protein;protein_id=YP_002345673.1;transl_table=11
NC_003143.1	RefSeq	gene	660010	660441	.	+	.	ID=gene578;Name=YPO0602;Dbxref=GeneID:1173447;gbkey=Gene;locus_tag=YPO0602
NC_003143.1	RefSeq	CDS	660010	660441	.	+	0	ID=cds560;Name=YP_002345674.1;Parent=gene578;Note=No significant database hits;Dbxref=UniProtKB%2FTrEMBL:Q7CGE1,Genbank:YP_002345674.1,GeneID:1173447;gbkey=CDS;product=hypothetical protein;protein_id=YP_002345674.1;transl_table=11
NC_003143.1	RefSeq	gene	660474	661229	.	+	.	ID=gene579;Name=YPO0602a;Dbxref=GeneID:16744738;gbkey=Gene;locus_tag=YPO0602a
NC_003143.1	RefSeq	CDS	660474	661229	.	+	0	ID=cds561;Name=YP_008479681.1;Parent=gene579;Dbxref=Genbank:YP_008479681.1,GeneID:16744738;gbkey=CDS;product=hemagglutinin;protein_id=YP_008479681.1;transl_table=11
NC_003143.1	RefSeq	gene	661293	661457	.	+	.	ID=gene580;Name=YPO0602b;Dbxref=GeneID:16744739;gbkey=Gene;locus_tag=YPO0602b
NC_003143.1	RefSeq	CDS	661293	661457	.	+	0	ID=cds562;Name=YP_008479682.1;Parent=gene580;Dbxref=Genbank:YP_008479682.1,GeneID:16744739;gbkey=CDS;product=hypothetical protein;protein_id=YP_008479682.1;transl_table=11
NC_003143.1	RefSeq	gene	661725	664010	.	-	.	ID=gene581;Name=yapF;Dbxref=GeneID:1173449;gbkey=Gene;gene=yapF;locus_tag=YPO0606
NC_003143.1	RefSeq	CDS	661725	664010	.	-	0	ID=cds563;Name=YP_002345675.1;Parent=gene581;Dbxref=InterPro:IPR005546,InterPro:IPR006315,UniProtKB%2FTrEMBL:Q9F287,Genbank:YP_002345675.1,GeneID:1173449;gbkey=CDS;gene=yapF;product=autotransporter protein;protein_id=YP_002345675.1;transl_table=11
NC_003143.1	RefSeq	gene	664070	665065	.	-	.	ID=gene582;Name=YPO0607;Dbxref=GeneID:1173450;gbkey=Gene;locus_tag=YPO0607
NC_003143.1	RefSeq	CDS	664070	665065	.	-	0	ID=cds564;Name=YP_002345676.1;Parent=gene582;Dbxref=UniProtKB%2FTrEMBL:Q74RU2,Genbank:YP_002345676.1,GeneID:1173450;gbkey=CDS;product=hypothetical protein;protein_id=YP_002345676.1;transl_table=11
NC_003143.1	RefSeq	gene	665167	666546	.	-	.	ID=gene583;Name=YPO0608;Dbxref=GeneID:1173451;gbkey=Gene;locus_tag=YPO0608
NC_003143.1	RefSeq	CDS	665167	666546	.	-	0	ID=cds565;Name=YP_002345677.1;Parent=gene583;Dbxref=UniProtKB%2FTrEMBL:Q7CGE3,Genbank:YP_002345677.1,GeneID:1173451;gbkey=CDS;product=hypothetical protein;protein_id=YP_002345677.1;transl_table=11
NC_003143.1	RefSeq	region	666469	666525	.	-	.	ID=id437;Note=1 probable transmembrane helix predicted;Dbxref=GeneID:1173451;gbkey=misc_feature
NC_003143.1	RefSeq	gene	666869	667987	.	+	.	ID=gene584;Name=YPO0609;Dbxref=GeneID:1173452;gbkey=Gene;locus_tag=YPO0609
NC_003143.1	RefSeq	CDS	666869	667987	.	+	0	ID=cds566;Name=YP_002345678.1;Parent=gene584;Dbxref=InterPro:IPR003439,InterPro:IPR003593,InterPro:IPR008995,InterPro:IPR013611,UniProtKB%2FTrEMBL:Q7CGE4,Genbank:YP_002345678.1,GeneID:1173452;gbkey=CDS;product=transporter ATP-binding protein;protein_id=YP_002345678.1;transl_table=11
NC_003143.1	RefSeq	region	667274	667318	.	+	.	ID=id438;Note=PS00211 ABC transporters family signature.;Dbxref=GeneID:1173452;gbkey=misc_feature
NC_003143.1	RefSeq	gene	668070	671423	.	+	.	ID=gene585;Name=YPO0610;Dbxref=GeneID:1173453;gbkey=Gene;locus_tag=YPO0610
NC_003143.1	RefSeq	CDS	668070	671423	.	+	0	ID=cds567;Name=YP_002345679.1;Parent=gene585;Dbxref=InterPro:IPR008928,UniProtKB%2FTrEMBL:Q7CGE5,Genbank:YP_002345679.1,GeneID:1173453;gbkey=CDS;product=hypothetical protein;protein_id=YP_002345679.1;transl_table=11
NC_003143.1	RefSeq	gene	671532	672518	.	+	.	ID=gene586;Name=YPO0611;Dbxref=GeneID:1173454;gbkey=Gene;locus_tag=YPO0611
NC_003143.1	RefSeq	CDS	671532	672518	.	+	0	ID=cds568;Name=YP_002345680.1;Parent=gene586;Dbxref=InterPro:IPR000843,InterPro:IPR001761,InterPro:IPR010982,UniProtKB%2FTrEMBL:Q7CGE6,Genbank:YP_002345680.1,GeneID:1173454;gbkey=CDS;product=LacI family regulatory protein;protein_id=YP_002345680.1;transl_table=11
NC_003143.1	RefSeq	region	671538	671603	.	+	.	ID=id439;Note=Predicted helix-turn-helix motif with score 2187 %28%2B6.64 SD%29 at aa 3-24%2C sequence VTIKDVAKRAKVSISTVSYAIN;Dbxref=GeneID:1173454;gbkey=misc_feature
NC_003143.1	RefSeq	region	671544	671600	.	+	.	ID=id440;Note=PS00356 Bacterial regulatory proteins%2C lacI family signature.;Dbxref=GeneID:1173454;gbkey=misc_feature
NC_003143.1	RefSeq	gene	672595	673839	.	+	.	ID=gene587;Name=YPO0612;Dbxref=GeneID:1173455;gbkey=Gene;locus_tag=YPO0612
NC_003143.1	RefSeq	CDS	672595	673839	.	+	0	ID=cds569;Name=YP_002345681.1;Parent=gene587;Dbxref=InterPro:IPR006059,UniProtKB%2FTrEMBL:Q7CGE7,Genbank:YP_002345681.1,GeneID:1173455;gbkey=CDS;product=sugar binding protein;protein_id=YP_002345681.1;transl_table=11
NC_003143.1	RefSeq	gene	673893	674774	.	+	.	ID=gene588;Name=YPO0613;Dbxref=GeneID:1173456;gbkey=Gene;locus_tag=YPO0613
NC_003143.1	RefSeq	CDS	673893	674774	.	+	0	ID=cds570;Name=YP_002345682.1;Parent=gene588;Dbxref=InterPro:IPR000515,InterPro:IPR006025,UniProtKB%2FTrEMBL:Q7CGE8,Genbank:YP_002345682.1,GeneID:1173456;gbkey=CDS;product=permease;protein_id=YP_002345682.1;transl_table=11
NC_003143.1	RefSeq	region	674427	674513	.	+	.	ID=id441;Note=PS00402 Binding-protein-dependent transport systems inner membrane comp. sign.;Dbxref=GeneID:1173456;gbkey=misc_feature
NC_003143.1	RefSeq	gene	674774	675592	.	+	.	ID=gene589;Name=YPO0614;Dbxref=GeneID:1173457;gbkey=Gene;locus_tag=YPO0614
NC_003143.1	RefSeq	CDS	674774	675592	.	+	0	ID=cds571;Name=YP_002345683.1;Parent=gene589;Dbxref=InterPro:IPR000515,UniProtKB%2FTrEMBL:Q7CGE9,Genbank:YP_002345683.1,GeneID:1173457;gbkey=CDS;product=permease;protein_id=YP_002345683.1;transl_table=11
NC_003143.1	RefSeq	region	675242	675328	.	+	.	ID=id442;Note=PS00402 Binding-protein-dependent transport systems inner membrane comp. sign.;Dbxref=GeneID:1173457;gbkey=misc_feature
NC_003143.1	RefSeq	gene	675622	676104	.	+	.	ID=gene590;Name=YPO0615;Dbxref=GeneID:1173458;gbkey=Gene;locus_tag=YPO0615
NC_003143.1	RefSeq	CDS	675622	676104	.	+	0	ID=cds572;Name=YP_002345684.1;Parent=gene590;Dbxref=UniProtKB%2FTrEMBL:Q0WJ54,Genbank:YP_002345684.1,GeneID:1173458;gbkey=CDS;product=hypothetical protein;protein_id=YP_002345684.1;transl_table=11
NC_003143.1	RefSeq	gene	676155	678338	.	+	.	ID=gene591;Name=YPO0616;Dbxref=GeneID:1173459;gbkey=Gene;locus_tag=YPO0616
NC_003143.1	RefSeq	CDS	676155	678338	.	+	0	ID=cds573;Name=YP_002345685.1;Parent=gene591;Dbxref=InterPro:IPR001764,InterPro:IPR002772,UniProtKB%2FTrEMBL:Q7CGF0,Genbank:YP_002345685.1,GeneID:1173459;gbkey=CDS;product=glycosyl hydrolase;protein_id=YP_002345685.1;transl_table=11
NC_003143.1	RefSeq	gene	678402	679928	.	-	.	ID=gene592;Name=YPO0617;Dbxref=GeneID:1173460;gbkey=Gene;locus_tag=YPO0617
NC_003143.1	RefSeq	CDS	678402	679928	.	-	0	ID=cds574;Name=YP_002345686.1;Parent=gene592;Dbxref=InterPro:IPR003423,UniProtKB%2FTrEMBL:Q7CGF1,Genbank:YP_002345686.1,GeneID:1173460;gbkey=CDS;product=hypothetical protein;protein_id=YP_002345686.1;transl_table=11
NC_003143.1	RefSeq	region	679530	679595	.	-	.	ID=id443;Note=1 probable transmembrane helix predicted;Dbxref=GeneID:1173460;gbkey=misc_feature
NC_003143.1	RefSeq	gene	679933	681702	.	-	.	ID=gene593;Name=YPO0618;Dbxref=GeneID:1173461;gbkey=Gene;locus_tag=YPO0618
NC_003143.1	RefSeq	CDS	679933	681702	.	-	0	ID=cds575;Name=YP_002345687.1;Parent=gene593;Dbxref=InterPro:IPR006726,UniProtKB%2FTrEMBL:Q74RT1,Genbank:YP_002345687.1,GeneID:1173461;gbkey=CDS;product=hypothetical protein;protein_id=YP_002345687.1;transl_table=11
NC_003143.1	RefSeq	region	680419	680448	.	-	.	ID=id444;Note=PS00339 Aminoacyl-transfer RNA synthetases class-II signature 2.;Dbxref=GeneID:1173461;gbkey=misc_feature
NC_003143.1	RefSeq	gene	681818	682867	.	-	.	ID=gene594;Name=YPO0619;Dbxref=GeneID:1173462;gbkey=Gene;locus_tag=YPO0619
NC_003143.1	RefSeq	CDS	681818	682867	.	-	0	ID=cds576;Name=YP_002345688.1;Parent=gene594;Note=with MdtO and MdtP is involved in resistance to puromycin%2C acriflavine and tetraphenylarsonium chloride;Dbxref=InterPro:IPR006143,UniProtKB%2FTrEMBL:Q7CGF2,Genbank:YP_002345688.1,GeneID:1173462;gbkey=CDS;product=multidrug resistance protein MdtN;protein_id=YP_002345688.1;transl_table=11
NC_003143.1	RefSeq	region	682772	682828	.	-	.	ID=id445;Note=1 probable transmembrane helix predicted;Dbxref=GeneID:1173462;gbkey=misc_feature
NC_003143.1	RefSeq	gene	682877	683203	.	-	.	ID=gene595;Name=YPO0620;Dbxref=GeneID:1173463;gbkey=Gene;locus_tag=YPO0620
NC_003143.1	RefSeq	CDS	682877	683203	.	-	0	ID=cds577;Name=YP_002345689.1;Parent=gene595;Dbxref=UniProtKB%2FTrEMBL:Q0WJ49,Genbank:YP_002345689.1,GeneID:1173463;gbkey=CDS;product=hypothetical protein;protein_id=YP_002345689.1;transl_table=11
NC_003143.1	RefSeq	gene	683209	683409	.	-	.	ID=gene596;Name=YPO0621;Dbxref=GeneID:1173464;gbkey=Gene;locus_tag=YPO0621
NC_003143.1	RefSeq	CDS	683209	683409	.	-	0	ID=cds578;Name=YP_002345690.1;Parent=gene596;Note=No significant database hits;Dbxref=UniProtKB%2FTrEMBL:Q7CGF3,Genbank:YP_002345690.1,GeneID:1173464;gbkey=CDS;product=hypothetical protein;protein_id=YP_002345690.1;transl_table=11
NC_003143.1	RefSeq	gene	683582	683689	.	-	.	ID=gene597;Name=YPO0622;Dbxref=GeneID:1173465;gbkey=Gene;locus_tag=YPO0622
NC_003143.1	RefSeq	CDS	683582	683689	.	-	0	ID=cds579;Name=YP_002345691.1;Parent=gene597;Note=No significant database hits;Dbxref=UniProtKB%2FTrEMBL:Q0WJ47,Genbank:YP_002345691.1,GeneID:1173465;gbkey=CDS;product=hypothetical protein;protein_id=YP_002345691.1;transl_table=11
NC_003143.1	RefSeq	gene	684175	685407	.	+	.	ID=gene598;Name=YPO0623;Dbxref=GeneID:1173466;gbkey=Gene;locus_tag=YPO0623
NC_003143.1	RefSeq	CDS	684175	685407	.	+	0	ID=cds580;Name=YP_002345692.1;Parent=gene598;Dbxref=InterPro:IPR001176,InterPro:IPR004838,InterPro:IPR004839,UniProtKB%2FTrEMBL:Q7CGF4,Genbank:YP_002345692.1,GeneID:1173466;gbkey=CDS;product=aminotransferase;protein_id=YP_002345692.1;transl_table=11
NC_003143.1	RefSeq	region	684910	684951	.	+	.	ID=id446;Note=PS00105 Aminotransferases class-I pyridoxal-phosphate attachment site.;Dbxref=GeneID:1173466;gbkey=misc_feature
NC_003143.1	RefSeq	gene	685400	686851	.	+	.	ID=gene599;Name=YPO0624;Dbxref=GeneID:1173467;gbkey=Gene;locus_tag=YPO0624
NC_003143.1	RefSeq	CDS	685400	686851	.	+	0	ID=cds581;Name=YP_002345693.1;Parent=gene599;Dbxref=InterPro:IPR004770,UniProtKB%2FTrEMBL:Q7CGF5,Genbank:YP_002345693.1,GeneID:1173467;gbkey=CDS;product=hypothetical protein;protein_id=YP_002345693.1;transl_table=11
NC_003143.1	RefSeq	gene	686855	687301	.	+	.	ID=gene600;Name=YPO0625;Dbxref=GeneID:1173468;gbkey=Gene;locus_tag=YPO0625
NC_003143.1	RefSeq	CDS	686855	687301	.	+	0	ID=cds582;Name=YP_002345694.1;Parent=gene600;Dbxref=UniProtKB%2FTrEMBL:Q7CGF6,Genbank:YP_002345694.1,GeneID:1173468;gbkey=CDS;product=hypothetical protein;protein_id=YP_002345694.1;transl_table=11
NC_003143.1	RefSeq	gene	687471	688061	.	+	.	ID=gene601;Name=YPO0626;Dbxref=GeneID:1173469;gbkey=Gene;locus_tag=YPO0626
NC_003143.1	RefSeq	CDS	687471	688061	.	+	0	ID=cds583;Name=YP_002345695.1;Parent=gene601;Dbxref=InterPro:IPR013559,UniProtKB%2FTrEMBL:Q0WJ43,Genbank:YP_002345695.1,GeneID:1173469;gbkey=CDS;product=hypothetical protein;protein_id=YP_002345695.1;transl_table=11
NC_003143.1	RefSeq	gene	688077	688457	.	+	.	ID=gene602;Name=YPO0627;Dbxref=GeneID:1173470;gbkey=Gene;locus_tag=YPO0627
NC_003143.1	RefSeq	CDS	688077	688457	.	+	0	ID=cds584;Name=YP_002345696.1;Parent=gene602;Dbxref=InterPro:IPR006056,InterPro:IPR006175,InterPro:IPR013813,UniProtKB%2FTrEMBL:Q7CGF7,Genbank:YP_002345696.1,GeneID:1173470;gbkey=CDS;product=translational inhibitor protein;protein_id=YP_002345696.1;transl_table=11
NC_003143.1	RefSeq	region	688380	688436	.	+	.	ID=id447;Note=PS01094 Uncharacterized protein family UPF0076 signature.;Dbxref=GeneID:1173470;gbkey=misc_feature
NC_003143.1	RefSeq	gene	688742	689146	.	+	.	ID=gene603;Name=YPO0628;Dbxref=GeneID:1173471;gbkey=Gene;locus_tag=YPO0628
NC_003143.1	RefSeq	CDS	688742	689146	.	+	0	ID=cds585;Name=YP_002345697.1;Parent=gene603;Dbxref=InterPro:IPR006175,InterPro:IPR013813,UniProtKB%2FTrEMBL:Q7CGF8,Genbank:YP_002345697.1,GeneID:1173471;gbkey=CDS;product=translational inhibitor protein;protein_id=YP_002345697.1;transl_table=11
NC_003143.1	RefSeq	gene	689361	689663	.	-	.	ID=gene604;Name=YPO0629;Dbxref=GeneID:1173472;gbkey=Gene;locus_tag=YPO0629
NC_003143.1	RefSeq	CDS	689361	689663	.	-	0	ID=cds586;Name=YP_002345698.1;Parent=gene604;Dbxref=UniProtKB%2FTrEMBL:Q7CGF9,Genbank:YP_002345698.1,GeneID:1173472;gbkey=CDS;product=hypothetical protein;protein_id=YP_002345698.1;transl_table=11
NC_003143.1	RefSeq	gene	689923	690639	.	-	.	ID=gene605;Name=YPO0630;Dbxref=GeneID:1173473;gbkey=Gene;locus_tag=YPO0630
NC_003143.1	RefSeq	CDS	689923	690639	.	-	0	ID=cds587;Name=YP_002345699.1;Parent=gene605;Dbxref=InterPro:IPR012335,InterPro:IPR012336,UniProtKB%2FTrEMBL:Q7CGG0,Genbank:YP_002345699.1,GeneID:1173473;gbkey=CDS;product=hypothetical protein;protein_id=YP_002345699.1;transl_table=11
NC_003143.1	RefSeq	gene	690801	691733	.	+	.	ID=gene606;Name=YPO0631;Dbxref=GeneID:1173474;gbkey=Gene;locus_tag=YPO0631
NC_003143.1	RefSeq	CDS	690801	691733	.	+	0	ID=cds588;Name=YP_002345700.1;Parent=gene606;Dbxref=InterPro:IPR000847,InterPro:IPR005119,InterPro:IPR005829,InterPro:IPR011991,UniProtKB%2FTrEMBL:Q7CGG1,Genbank:YP_002345700.1,GeneID:1173474;gbkey=CDS;product=LysR family transcriptional regulator;protein_id=YP_002345700.1;transl_table=11
NC_003143.1	RefSeq	gene	692184	692692	.	+	.	ID=gene607;Name=YPO0632;Dbxref=GeneID:1173475;gbkey=Gene;locus_tag=YPO0632;pseudo=true
NC_003143.1	RefSeq	gene	692692	692850	.	-	.	ID=gene608;Name=YPO0634;Dbxref=GeneID:1173476;gbkey=Gene;locus_tag=YPO0634
NC_003143.1	RefSeq	CDS	692692	692850	.	-	0	ID=cds589;Name=YP_002345701.1;Parent=gene608;Note=doubtful CDS with no significant database hits;Dbxref=UniProtKB%2FTrEMBL:Q7CGG2,Genbank:YP_002345701.1,GeneID:1173476;gbkey=CDS;product=hypothetical protein;protein_id=YP_002345701.1;transl_table=11
NC_003143.1	RefSeq	gene	693382	693636	.	+	.	ID=gene609;Name=YPO0636;Dbxref=GeneID:1173478;gbkey=Gene;locus_tag=YPO0636
NC_003143.1	RefSeq	CDS	693382	693636	.	+	0	ID=cds590;Name=YP_002345703.1;Parent=gene609;Note=doubtful CDS with no significant database hits;Dbxref=UniProtKB%2FTrEMBL:Q74RR7,Genbank:YP_002345703.1,GeneID:1173478;gbkey=CDS;product=hypothetical protein;protein_id=YP_002345703.1;transl_table=11
NC_003143.1	RefSeq	repeat_region	693715	695668	.	+	.	ID=id448;Note=insertion sequence:IS100;gbkey=repeat_region
NC_003143.1	RefSeq	repeat_region	693715	693742	.	+	.	ID=id449;Note=IS100 inverted repeat;gbkey=repeat_region
NC_003143.1	RefSeq	gene	693801	694823	.	+	.	ID=gene610;Name=y1093;Dbxref=GeneID:1173479;gbkey=Gene;gene=y1093;gene_synonym=ypmt1;locus_tag=YPO0637
NC_003143.1	RefSeq	CDS	693801	694823	.	+	0	ID=cds591;Name=YP_002345704.1;Parent=gene610;Dbxref=InterPro:IPR001584,InterPro:IPR006120,InterPro:IPR009057,InterPro:IPR012287,InterPro:IPR012337,UniProtKB%2FTrEMBL:Q7ARN5,Genbank:YP_002345704.1,GeneID:1173479;gbkey=CDS;gene=y1093;product=transposase for insertion sequence IS100;protein_id=YP_002345704.1;transl_table=11
NC_003143.1	RefSeq	region	693852	693917	.	+	.	ID=id450;Note=Predicted helix-turn-helix motif with score 2147 %28%2B6.50 SD%29 at aa 18-39%2C sequence MSSRAIARELGISRNTVKRYLQ;Dbxref=GeneID:1173479;gbkey=misc_feature;gene=y1093
NC_003143.1	RefSeq	gene	694820	695602	.	+	.	ID=gene611;Name=YPO0638;Note=ypmt1.57c;Dbxref=GeneID:1173480;gbkey=Gene;locus_tag=YPO0638
NC_003143.1	RefSeq	CDS	694820	695602	.	+	0	ID=cds592;Name=YP_002345705.1;Parent=gene611;Dbxref=InterPro:IPR001270,InterPro:IPR002611,InterPro:IPR003593,UniProtKB%2FTrEMBL:Q7ARK4,Genbank:YP_002345705.1,GeneID:1173480;gbkey=CDS;product=transposase%2FIS protein;protein_id=YP_002345705.1;transl_table=11
NC_003143.1	RefSeq	region	695147	695170	.	+	.	ID=id451;Note=PS00017 ATP%2FGTP-binding site motif A %28P-loop%29.;Dbxref=GeneID:1173480;gbkey=misc_feature
NC_003143.1	RefSeq	repeat_region	695641	695668	.	-	.	ID=id452;Note=IS100 inverted repeat;gbkey=repeat_region
NC_003143.1	RefSeq	gene	697119	697589	.	+	.	ID=gene612;Name=YPO0640;Dbxref=GeneID:1173482;gbkey=Gene;locus_tag=YPO0640
NC_003143.1	RefSeq	CDS	697119	697589	.	+	0	ID=cds593;Name=YP_002345707.1;Parent=gene612;Note=no significant database hits;Dbxref=UniProtKB%2FTrEMBL:Q0WJ31,Genbank:YP_002345707.1,GeneID:1173482;gbkey=CDS;product=hypothetical protein;protein_id=YP_002345707.1;transl_table=11
NC_003143.1	RefSeq	gene	697667	698071	.	+	.	ID=gene613;Name=YPO0641;Dbxref=GeneID:1173483;gbkey=Gene;locus_tag=YPO0641
NC_003143.1	RefSeq	CDS	697667	698071	.	+	0	ID=cds594;Name=YP_002345708.1;Parent=gene613;Note=no significant database hits;Dbxref=UniProtKB%2FTrEMBL:Q0WJ30,Genbank:YP_002345708.1,GeneID:1173483;gbkey=CDS;product=hypothetical protein;protein_id=YP_002345708.1;transl_table=11
NC_003143.1	RefSeq	gene	698088	698694	.	+	.	ID=gene614;Name=YPO0641a;Dbxref=GeneID:1173484;gbkey=Gene;locus_tag=YPO0641a;pseudo=true
NC_003143.1	RefSeq	gene	698575	698694	.	+	.	ID=gene615;Name=YPO0642;Dbxref=GeneID:1173485;gbkey=Gene;locus_tag=YPO0642
NC_003143.1	RefSeq	CDS	698575	698694	.	+	0	ID=cds595;Name=YP_002345710.1;Parent=gene615;Note=no significant database hits;Dbxref=UniProtKB%2FTrEMBL:Q0WJ28,Genbank:YP_002345710.1,GeneID:1173485;gbkey=CDS;product=hypothetical protein;protein_id=YP_002345710.1;transl_table=11
NC_003143.1	RefSeq	gene	698940	699016	.	-	.	ID=gene616;Name=YPt_05;Dbxref=GeneID:1173486;gbkey=Gene;locus_tag=YPt_05
NC_003143.1	RefSeq	tRNA	698940	699016	.	-	.	ID=rna8;Parent=gene616;Note=tRNA Met anticodon CAT%2C Cove score 93.29;Dbxref=GeneID:1173486;gbkey=tRNA;product=tRNA-Met
NC_003143.1	RefSeq	exon	698940	699016	.	-	.	ID=id453;Parent=rna8;Note=tRNA Met anticodon CAT%2C Cove score 93.29;Dbxref=GeneID:1173486;gbkey=tRNA;product=tRNA-Met
NC_003143.1	RefSeq	gene	699212	701050	.	-	.	ID=gene617;Name=rpoD;Dbxref=GeneID:1173487;gbkey=Gene;gene=rpoD;locus_tag=YPO0643
NC_003143.1	RefSeq	CDS	699212	701050	.	-	0	ID=cds596;Name=YP_002345711.1;Parent=gene617;Note=sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released%3B this is the primary sigma factor of bacteria;Dbxref=InterPro:IPR000943,InterPro:IPR007127,InterPro:IPR007624,InterPro:IPR007627,InterPro:IPR007630,InterPro:IPR007631,InterPro:IPR009042,InterPro:IPR009043,InterPro:IPR011991,InterPro:IPR012760,UniProtKB%2FTrEMBL:Q0WJ27,Genbank:YP_002345711.1,GeneID:1173487;gbkey=CDS;gene=rpoD;product=RNA polymerase sigma factor RpoD;protein_id=YP_002345711.1;transl_table=11
NC_003143.1	RefSeq	region	699260	699340	.	-	.	ID=id454;Note=PS00716 Sigma-70 factors family signature 2.;Dbxref=GeneID:1173487;gbkey=misc_feature;gene=rpoD
NC_003143.1	RefSeq	region	699278	699343	.	-	.	ID=id455;Note=Predicted helix-turn-helix motif with score 1917 %28%2B5.72 SD%29 at aa 590-611%2C sequence HTLEEVGKQFDVTRERIRQIEA;Dbxref=GeneID:1173487;gbkey=misc_feature;gene=rpoD
NC_003143.1	RefSeq	region	699806	699847	.	-	.	ID=id456;Note=PS00715 Sigma-70 factors family signature 1.;Dbxref=GeneID:1173487;gbkey=misc_feature;gene=rpoD
NC_003143.1	RefSeq	gene	701208	702956	.	-	.	ID=gene618;Name=dnaG;Dbxref=GeneID:1173488;gbkey=Gene;gene=dnaG;gene_synonym=dnaP,parB;locus_tag=YPO0644
NC_003143.1	RefSeq	CDS	701208	702956	.	-	0	ID=cds597;Name=YP_002345712.1;Parent=gene618;Note=synthesizes RNA primers at the replication forks;Dbxref=InterPro:IPR002694,InterPro:IPR006154,InterPro:IPR006171,InterPro:IPR006295,InterPro:IPR006647,InterPro:IPR013173,InterPro:IPR013264,UniProtKB%2FTrEMBL:Q7CGG5,Genbank:YP_002345712.1,GeneID:1173488;gbkey=CDS;gene=dnaG;product=DNA primase;protein_id=YP_002345712.1;transl_table=11
NC_003143.1	RefSeq	gene	703092	703307	.	-	.	ID=gene619;Name=rpsU;Dbxref=GeneID:1173489;gbkey=Gene;gene=rpsU;locus_tag=YPO0645
NC_003143.1	RefSeq	CDS	703092	703307	.	-	0	ID=cds598;Name=YP_002345713.1;Parent=gene619;Note=a small basic protein that is one of the last in the subunit assembly%3B omission does not prevent assembly but the subunit is inactive%3B binds central domain of 16S rRNA;Dbxref=InterPro:IPR001911,UniProtKB%2FTrEMBL:Q0WJ25,Genbank:YP_002345713.1,GeneID:1173489;gbkey=CDS;gene=rpsU;product=30S ribosomal protein S21;protein_id=YP_002345713.1;transl_table=11
NC_003143.1	RefSeq	region	703233	703271	.	-	.	ID=id457;Note=PS01181 Ribosomal protein S21 signature.;Dbxref=GeneID:1173489;gbkey=misc_feature;gene=rpsU
NC_003143.1	RefSeq	gene	703713	704726	.	+	.	ID=gene620;Name=gcp;Dbxref=GeneID:1173490;gbkey=Gene;gene=gcp;locus_tag=YPO0646
NC_003143.1	RefSeq	CDS	703713	704726	.	+	0	ID=cds599;Name=YP_002345714.1;Parent=gene620;Note=in most organisms%2C only the N-terminal domain is present in a single polypeptide%3B in some archaea this domain is fused to a kinase domain%3B this gene is essential for growth in Escherichia coli and Bacillus subtilis%3B the secreted glycoprotease from Pasteurella haemolytica showed specificity for O-sialoglycosylated proteins%3B the Pyrococcus structure shows DNA-binding properties%2C iron-binding%2C ATP-binding%2C and AP endonuclease activity;Dbxref=InterPro:IPR000905,InterPro:IPR009180,UniProtKB%2FTrEMBL:Q74RQ9,Genbank:YP_002345714.1,GeneID:1173490;gbkey=CDS;gene=gcp;product=DNA-binding%2Firon metalloprotein%2FAP endonuclease;protein_id=YP_002345714.1;transl_table=11
NC_003143.1	RefSeq	region	703998	704060	.	+	.	ID=id458;Note=PS01016 Glycoprotease family signature.;Dbxref=GeneID:1173490;gbkey=misc_feature;gene=gcp
NC_003143.1	RefSeq	gene	704972	705622	.	-	.	ID=gene621;Name=YPO0647;Dbxref=GeneID:1173491;gbkey=Gene;locus_tag=YPO0647
NC_003143.1	RefSeq	CDS	704972	705622	.	-	0	ID=cds600;Name=YP_002345715.1;Parent=gene621;Note=involved in acylation of glycerol-3-phosphate to form 1-acyl-glycerol-3 phosphate for use in phospholipid biosynthesis%3B functions with PlsX;Dbxref=InterPro:IPR003811,UniProtKB%2FTrEMBL:Q0WJ23,Genbank:YP_002345715.1,GeneID:1173491;gbkey=CDS;product=glycerol-3-phosphate acyltransferase PlsY;protein_id=YP_002345715.1;transl_table=11
NC_003143.1	RefSeq	gene	705730	706089	.	+	.	ID=gene622;Name=folB;Dbxref=GeneID:1173492;gbkey=Gene;gene=folB;locus_tag=YPO0648
NC_003143.1	RefSeq	CDS	705730	706089	.	+	0	ID=cds601;Name=YP_002345716.1;Parent=gene622;Note=catalyzes the conversion of 7%2C8-dihydroneopterin to 6-hydroxymethyl-7%2C8-dihydropterin and can also catalyze the epimerization of carbon 2%27 of dihydroneopterin and dihydromonapterin;Dbxref=InterPro:IPR006156,InterPro:IPR006157,UniProtKB%2FTrEMBL:Q0WJ22,Genbank:YP_002345716.1,GeneID:1173492;gbkey=CDS;gene=folB;product=bifunctional dihydroneopterin aldolase%2Fdihydroneopterin triphosphate 2%27-epimerase;protein_id=YP_002345716.1;transl_table=11
NC_003143.1	RefSeq	gene	706363	707181	.	+	.	ID=gene623;Name=uppP;Dbxref=GeneID:1173493;gbkey=Gene;gene=uppP;locus_tag=YPO0649
NC_003143.1	RefSeq	CDS	706363	707181	.	+	0	ID=cds602;Name=YP_002345717.1;Parent=gene623;Note=BacA%3B phosphatase activity in Escherichia coli not kinase%3B involved in bacitracin resistance as bacitracin supposedly sequesters undecaprenyl disphosphate which reduces the pool of lipid carrier available to the cell;Dbxref=InterPro:IPR003824,UniProtKB%2FTrEMBL:Q0WJ21,Genbank:YP_002345717.1,GeneID:1173493;gbkey=CDS;gene=uppP;product=undecaprenyl pyrophosphate phosphatase;protein_id=YP_002345717.1;transl_table=11
NC_003143.1	RefSeq	region	706594	706617	.	+	.	ID=id459;Note=PS00017 ATP%2FGTP-binding site motif A %28P-loop%29.;Dbxref=GeneID:1173493;gbkey=misc_feature;gene=uppP
NC_003143.1	RefSeq	gene	707417	708655	.	-	.	ID=gene624;Name=cca;Dbxref=GeneID:1173494;gbkey=Gene;gene=cca;locus_tag=YPO0650
NC_003143.1	RefSeq	CDS	707417	708655	.	-	0	ID=cds603;Name=YP_002345718.1;Parent=gene624;Note=catalyzes the addition and repair of the essential 3%27-terminal CCA sequence in tRNAs without using a nucleic acid template%3B phosphohydrolase activities include hydrolysis of pyrophosphate%2C 5%27-nucleoside tri- and diphosphates%2C NADP%2C and 2%27-AMP with the production of Pi%2C metal-dependent phosphodiesterase activity for 2%27%2C3%27-cAMP%2C 2%27%2C3%27-cGMP%2C and 2%27%2C3%27-cCMP%2C and hydrolysis 2%27%2C3%27-cyclic substrates with the formation of 2%27-nucleotides and 3%27-nucleotides%3B these phosphohydrolase activities are probably involved in the repair of the tRNA 3%27-CCA terminus degraded by intracellular RNases;Dbxref=InterPro:IPR002646,InterPro:IPR003607,InterPro:IPR006674,InterPro:IPR012006,UniProtKB%2FTrEMBL:Q0WJ20,Genbank:YP_002345718.1,GeneID:1173494;gbkey=CDS;gene=cca;product=multifunctional tRNA nucleotidyl transferase%2F2%273%27-cyclic phosphodiesterase%2F2%27nucleotidase%2Fphosphatase;protein_id=YP_002345718.1;transl_table=11
NC_003143.1	RefSeq	gene	708815	709438	.	-	.	ID=gene625;Name=YPO0651;Dbxref=GeneID:1173495;gbkey=Gene;locus_tag=YPO0651
NC_003143.1	RefSeq	CDS	708815	709438	.	-	0	ID=cds604;Name=YP_002345719.1;Parent=gene625;Dbxref=InterPro:IPR003646,UniProtKB%2FTrEMBL:Q7CGG7,Genbank:YP_002345719.1,GeneID:1173495;gbkey=CDS;product=signal transduction protein;protein_id=YP_002345719.1;transl_table=11
NC_003143.1	RefSeq	region	708854	708919	.	-	.	ID=id460;Note=1 probable transmembrane helix predicted;Dbxref=GeneID:1173495;gbkey=misc_feature
NC_003143.1	RefSeq	gene	709742	711049	.	+	.	ID=gene626;Name=YPO0652;Dbxref=GeneID:1173496;gbkey=Gene;locus_tag=YPO0652
NC_003143.1	RefSeq	CDS	709742	711049	.	+	0	ID=cds605;Name=YP_002345720.1;Parent=gene626;Dbxref=InterPro:IPR007899,InterPro:IPR008172,InterPro:IPR012378,UniProtKB%2FTrEMBL:Q74RQ5,Genbank:YP_002345720.1,GeneID:1173496;gbkey=CDS;product=hypothetical protein;protein_id=YP_002345720.1;transl_table=11
NC_003143.1	RefSeq	gene	711220	714075	.	+	.	ID=gene627;Name=glnE;Dbxref=GeneID:1173497;gbkey=Gene;gene=glnE;locus_tag=YPO0653
NC_003143.1	RefSeq	CDS	711220	714075	.	+	0	ID=cds606;Name=YP_002345721.1;Parent=gene627;Note=catalyzes the ATP-dependent addition of AMP to a subunit of glutamine synthetase%3B also catalyzes the reverse reaction - deadenylation%3B adenylation%2Fdeadenylation of glutamine synthetase subunits is important for the regulation of this enzyme;Dbxref=InterPro:IPR005190,UniProtKB%2FTrEMBL:Q0WJ17,Genbank:YP_002345721.1,GeneID:1173497;gbkey=CDS;gene=glnE;product=bifunctional glutamine-synthetase adenylyltransferase%2Fdeadenyltransferase;protein_id=YP_002345721.1;transl_table=11
NC_003143.1	RefSeq	gene	714210	715640	.	+	.	ID=gene628;Name=rfaE;Dbxref=GeneID:1173498;gbkey=Gene;gene=rfaE;gene_synonym=waaE;locus_tag=YPO0654
NC_003143.1	RefSeq	CDS	714210	715640	.	+	0	ID=cds607;Name=YP_002345722.1;Parent=gene628;Note=catalyzes the phosphorylation of D-glycero-D-manno-heptose 7-phosphate to form D%2CD-heptose-1%2C7-bisphosphate and catalyzes transfer of ADP to D-glycero-D-manno-heptose 1-phosphate forming ADP-D%2CD-heptose;Dbxref=InterPro:IPR002173,InterPro:IPR004820,InterPro:IPR004821,InterPro:IPR011611,InterPro:IPR011913,InterPro:IPR011914,UniProtKB%2FTrEMBL:Q0WJ16,Genbank:YP_002345722.1,GeneID:1173498;gbkey=CDS;gene=rfaE;product=bifunctional heptose 7-phosphate kinase%2Fheptose 1-phosphate adenyltransferase;protein_id=YP_002345722.1;transl_table=11
NC_003143.1	RefSeq	region	714360	714431	.	+	.	ID=id461;Note=PS00583 pfkB family of carbohydrate kinases signature 1.;Dbxref=GeneID:1173498;gbkey=misc_feature;gene=rfaE
NC_003143.1	RefSeq	gene	715677	716927	.	+	.	ID=gene629;Name=asoB;Dbxref=GeneID:1173499;gbkey=Gene;gene=asoB;gene_synonym=yjeH;locus_tag=YPO0655
NC_003143.1	RefSeq	CDS	715677	716927	.	+	0	ID=cds608;Name=YP_002345723.1;Parent=gene629;Note=uncharacterized member of the APC superfamily of amino acid transporters%3B unknown function;Dbxref=InterPro:IPR002293,InterPro:IPR004841,UniProtKB%2FTrEMBL:Q0WJ15,Genbank:YP_002345723.1,GeneID:1173499;gbkey=CDS;gene=asoB;product=hypothetical protein;protein_id=YP_002345723.1;transl_table=11
NC_003143.1	RefSeq	gene	717252	717533	.	-	.	ID=gene630;Name=YPO0656;Dbxref=GeneID:1173500;gbkey=Gene;locus_tag=YPO0656
NC_003143.1	RefSeq	CDS	717252	717533	.	-	0	ID=cds609;Name=YP_002345724.1;Parent=gene630;Dbxref=InterPro:IPR007475,UniProtKB%2FTrEMBL:Q7CGG8,Genbank:YP_002345724.1,GeneID:1173500;gbkey=CDS;product=hypothetical protein;protein_id=YP_002345724.1;transl_table=11
NC_003143.1	RefSeq	gene	717671	717860	.	+	.	ID=gene631;Name=YPO0658a;Dbxref=GeneID:16744740;gbkey=Gene;locus_tag=YPO0658a
NC_003143.1	RefSeq	ncRNA	717671	717860	.	+	.	ID=rna9;Parent=gene631;Dbxref=GeneID:16744740;gbkey=ncRNA;ncrna_class=other;product=FMN-riboswitch
NC_003143.1	RefSeq	exon	717671	717860	.	+	.	ID=id462;Parent=rna9;Dbxref=GeneID:16744740;gbkey=ncRNA;ncrna_class=other;product=FMN-riboswitch
NC_003143.1	RefSeq	gene	718102	718755	.	+	.	ID=gene632;Name=ribB;Dbxref=GeneID:1173502;gbkey=Gene;gene=ribB;locus_tag=YPO0658
NC_003143.1	RefSeq	CDS	718102	718755	.	+	0	ID=cds610;Name=YP_002345726.1;Parent=gene632;Note=DHBP synthase%3B functions during riboflavin biosynthesis;Dbxref=InterPro:IPR000422,UniProtKB%2FTrEMBL:Q0WJ12,Genbank:YP_002345726.1,GeneID:1173502;gbkey=CDS;gene=ribB;product=3%2C4-dihydroxy-2-butanone 4-phosphate synthase;protein_id=YP_002345726.1;transl_table=11
NC_003143.1	RefSeq	gene	719214	719996	.	+	.	ID=gene633;Name=YPO0659;Dbxref=GeneID:1173503;gbkey=Gene;locus_tag=YPO0659
NC_003143.1	RefSeq	CDS	719214	719996	.	+	0	ID=cds611;Name=YP_002345727.1;Parent=gene633;Note=seems to be involved in biofilm formation%3B in asymptomatic bacteriuria E. coli strains 83972 and VR50%2C the ygiD gene is upregulated during biofilm formation in urine;Dbxref=InterPro:IPR004183,UniProtKB%2FTrEMBL:Q7CGG9,Genbank:YP_002345727.1,GeneID:1173503;gbkey=CDS;product=hypothetical protein;protein_id=YP_002345727.1;transl_table=11
NC_003143.1	RefSeq	gene	720403	721563	.	-	.	ID=gene634;Name=YPO0660;Dbxref=GeneID:1173504;gbkey=Gene;locus_tag=YPO0660
NC_003143.1	RefSeq	CDS	720403	721563	.	-	0	ID=cds612;Name=YP_002345728.1;Parent=gene634;Dbxref=InterPro:IPR005494,UniProtKB%2FTrEMBL:Q7CGH0,Genbank:YP_002345728.1,GeneID:1173504;gbkey=CDS;product=hypothetical protein;protein_id=YP_002345728.1;transl_table=11
NC_003143.1	RefSeq	gene	721573	722259	.	-	.	ID=gene635;Name=YPO0661;Dbxref=GeneID:1173505;gbkey=Gene;locus_tag=YPO0661
NC_003143.1	RefSeq	CDS	721573	722259	.	-	0	ID=cds613;Name=YP_002345729.1;Parent=gene635;Dbxref=UniProtKB%2FTrEMBL:Q7CGH1,Genbank:YP_002345729.1,GeneID:1173505;gbkey=CDS;product=hypothetical protein;protein_id=YP_002345729.1;transl_table=11
NC_003143.1	RefSeq	gene	722325	722495	.	+	.	ID=gene636;Name=YPO0662;Dbxref=GeneID:1173506;gbkey=Gene;locus_tag=YPO0662
NC_003143.1	RefSeq	CDS	722325	722495	.	+	0	ID=cds614;Name=YP_002345730.1;Parent=gene636;Note=doubtful CDS with no significant database matches;Dbxref=UniProtKB%2FTrEMBL:Q74RP6,Genbank:YP_002345730.1,GeneID:1173506;gbkey=CDS;product=hypothetical protein;protein_id=YP_002345730.1;transl_table=11
NC_003143.1	RefSeq	gene	722560	723957	.	-	.	ID=gene637;Name=tolC;Dbxref=GeneID:1173507;gbkey=Gene;gene=tolC;gene_synonym=mtcB,mukA,refI,tolC;locus_tag=YPO0663
NC_003143.1	RefSeq	CDS	722560	723957	.	-	0	ID=cds615;Name=YP_002345731.1;Parent=gene637;Note=trimeric outer membrane protein involved in efflux of hydrophobic%2Famphipathic molecules%3B functions with a number of efflux systems in the inner membrane to transport molecules out of the cell;Dbxref=InterPro:IPR003423,InterPro:IPR010130,UniProtKB%2FTrEMBL:Q7CGH2,Genbank:YP_002345731.1,GeneID:1173507;gbkey=CDS;gene=tolC;product=outer membrane channel protein;protein_id=YP_002345731.1;transl_table=11
NC_003143.1	RefSeq	gene	724353	724985	.	+	.	ID=gene638;Name=nudF;Dbxref=GeneID:1173508;gbkey=Gene;gene=nudF;locus_tag=YPO0664
NC_003143.1	RefSeq	CDS	724353	724985	.	+	0	ID=cds616;Name=YP_002345732.1;Parent=gene638;Note=ADP-sugar pyrophosphatase%3B catalyzes the formation of D-ribose 5-phosphate from ADP-ribose%3B can also act on ADP-mannose and ADP-glucose;Dbxref=InterPro:IPR000086,InterPro:IPR004385,UniProtKB%2FTrEMBL:Q7CGH3,Genbank:YP_002345732.1,GeneID:1173508;gbkey=CDS;gene=nudF;product=ADP-ribose pyrophosphatase;protein_id=YP_002345732.1;transl_table=11
NC_003143.1	RefSeq	gene	725019	725444	.	+	.	ID=gene639;Name=YPO0665;Dbxref=GeneID:1173509;gbkey=Gene;locus_tag=YPO0665
NC_003143.1	RefSeq	CDS	725019	725444	.	+	0	ID=cds617;Name=YP_002345733.1;Parent=gene639;Dbxref=InterPro:IPR009659,UniProtKB%2FTrEMBL:Q7CGH4,Genbank:YP_002345733.1,GeneID:1173509;gbkey=CDS;product=hypothetical protein;protein_id=YP_002345733.1;transl_table=11
NC_003143.1	RefSeq	gene	725526	726353	.	+	.	ID=gene640;Name=icc;Dbxref=GeneID:1173510;gbkey=Gene;gene=icc;locus_tag=YPO0666
NC_003143.1	RefSeq	CDS	725526	726353	.	+	0	ID=cds618;Name=YP_002345734.1;Parent=gene640;Dbxref=InterPro:IPR004843,InterPro:IPR013622,UniProtKB%2FTrEMBL:Q74RP2,Genbank:YP_002345734.1,GeneID:1173510;gbkey=CDS;gene=icc;product=cyclic 3%27%2C5%27-adenosine monophosphate phosphodiesterase;protein_id=YP_002345734.1;transl_table=11
NC_003143.1	RefSeq	gene	726350	726934	.	+	.	ID=gene641;Name=icc;Dbxref=GeneID:1173511;gbkey=Gene;gene=icc;locus_tag=YPO0667
NC_003143.1	RefSeq	CDS	726350	726934	.	+	0	ID=cds619;Name=YP_002345735.1;Parent=gene641;Note=Displays esterase activity toward palmitoyl-CoA and pNP-butyrate;Dbxref=InterPro:IPR008886,UniProtKB%2FTrEMBL:Q7CGH5,Genbank:YP_002345735.1,GeneID:1173511;gbkey=CDS;product=esterase;protein_id=YP_002345735.1;transl_table=11
NC_003143.1	RefSeq	gene	727036	728931	.	+	.	ID=gene642;Name=parE;Dbxref=GeneID:1173512;gbkey=Gene;gene=parE;locus_tag=YPO0668
NC_003143.1	RefSeq	CDS	727036	728931	.	+	0	ID=cds620;Name=YP_002345736.1;Parent=gene642;Note=decatenates newly replicated chromosomal DNA and relaxes positive and negative DNA supercoiling;Dbxref=InterPro:IPR001241,InterPro:IPR002288,InterPro:IPR003594,InterPro:IPR005737,InterPro:IPR011558,InterPro:IPR013506,InterPro:IPR013759,InterPro:IPR013760,UniProtKB%2FTrEMBL:Q7CGH6,Genbank:YP_002345736.1,GeneID:1173512;gbkey=CDS;gene=parE;product=DNA topoisomerase IV subunit B;protein_id=YP_002345736.1;transl_table=11
NC_003143.1	RefSeq	region	728284	728310	.	+	.	ID=id463;Note=PS00177 DNA topoisomerase II signature.;Dbxref=GeneID:1173512;gbkey=misc_feature;gene=parE
NC_003143.1	RefSeq	gene	728935	729846	.	+	.	ID=gene643;Name=crgA;Dbxref=GeneID:1173513;gbkey=Gene;gene=crgA;locus_tag=YPO0669
NC_003143.1	RefSeq	CDS	728935	729846	.	+	0	ID=cds621;Name=YP_002345737.1;Parent=gene643;Dbxref=InterPro:IPR000847,InterPro:IPR005119,InterPro:IPR011991,UniProtKB%2FTrEMBL:Q7CGH7,Genbank:YP_002345737.1,GeneID:1173513;gbkey=CDS;gene=crgA;product=LysR family transcriptional regulator;protein_id=YP_002345737.1;transl_table=11
NC_003143.1	RefSeq	region	728986	729051	.	+	.	ID=id464;Note=Predicted helix-turn-helix motif with score 1163 %28%2B3.15 SD%29 at aa 18-39%2C sequence GSITAAAEQRSQTTSGISRALS;Dbxref=GeneID:1173513;gbkey=misc_feature;gene=crgA
NC_003143.1	RefSeq	region	728989	729081	.	+	.	ID=id465;Note=PS00044 Bacterial regulatory proteins%2C lysR family signature.;Dbxref=GeneID:1173513;gbkey=misc_feature;gene=crgA
NC_003143.1	RefSeq	gene	729904	730488	.	-	.	ID=gene644;Name=mda66;Dbxref=GeneID:1173514;gbkey=Gene;gene=mda66;gene_synonym=mdaB;locus_tag=YPO0670
NC_003143.1	RefSeq	CDS	729904	730488	.	-	0	ID=cds622;Name=YP_002345738.1;Parent=gene644;Dbxref=InterPro:IPR003680,UniProtKB%2FTrEMBL:Q7CGH8,Genbank:YP_002345738.1,GeneID:1173514;gbkey=CDS;gene=mda66;product=modulator of drug activity;protein_id=YP_002345738.1;transl_table=11
NC_003143.1	RefSeq	region	730135	730158	.	-	.	ID=id466;Note=PS00017 ATP%2FGTP-binding site motif A %28P-loop%29.;Dbxref=GeneID:1173514;gbkey=misc_feature;gene=mda66
NC_003143.1	RefSeq	gene	730792	733065	.	+	.	ID=gene645;Name=parC;Dbxref=GeneID:1173515;gbkey=Gene;gene=parC;locus_tag=YPO0671
NC_003143.1	RefSeq	CDS	730792	733065	.	+	0	ID=cds623;Name=YP_002345739.1;Parent=gene645;Note=decatenates newly replicated chromosomal DNA and relaxes positive and negative DNA supercoiling;Dbxref=InterPro:IPR002205,InterPro:IPR005742,InterPro:IPR006691,InterPro:IPR013758,InterPro:IPR013760,UniProtKB%2FTrEMBL:Q7CGH9,Genbank:YP_002345739.1,GeneID:1173515;gbkey=CDS;gene=parC;product=DNA topoisomerase IV subunit A;protein_id=YP_002345739.1;transl_table=11
NC_003143.1	RefSeq	region	732640	732663	.	+	.	ID=id467;Note=PS00017 ATP%2FGTP-binding site motif A %28P-loop%29.;Dbxref=GeneID:1173515;gbkey=misc_feature;gene=parC
NC_003143.1	RefSeq	gene	733354	734085	.	+	.	ID=gene646;Name=parF;Dbxref=GeneID:1173516;gbkey=Gene;gene=parF;gene_synonym=plsC;locus_tag=YPO0672
NC_003143.1	RefSeq	CDS	733354	734085	.	+	0	ID=cds624;Name=YP_002345740.1;Parent=gene646;Dbxref=InterPro:IPR002123,InterPro:IPR004552,UniProtKB%2FTrEMBL:Q74RN5,Genbank:YP_002345740.1,GeneID:1173516;gbkey=CDS;gene=parF;product=acyltransferase;protein_id=YP_002345740.1;transl_table=11
NC_003143.1	RefSeq	region	733357	733425	.	+	.	ID=id468;Note=1 probable transmembrane helix predicted;Dbxref=GeneID:1173516;gbkey=misc_feature;gene=parF
NC_003143.1	RefSeq	gene	734264	735688	.	+	.	ID=gene647;Name=sufI;Dbxref=GeneID:1173517;gbkey=Gene;gene=sufI;locus_tag=YPO0673
NC_003143.1	RefSeq	CDS	734264	735688	.	+	0	ID=cds625;Name=YP_002345741.1;Parent=gene647;Dbxref=InterPro:IPR006311,InterPro:IPR008972,InterPro:IPR011706,InterPro:IPR011707,UniProtKB%2FTrEMBL:Q7CGI0,Genbank:YP_002345741.1,GeneID:1173517;gbkey=CDS;gene=sufI;product=repressor protein for FtsI;protein_id=YP_002345741.1;transl_table=11
NC_003143.1	RefSeq	gene	735996	738340	.	+	.	ID=gene648;Name=YPO0674;Dbxref=GeneID:1173518;gbkey=Gene;locus_tag=YPO0674;pseudo=true
NC_003143.1	RefSeq	region	737121	737183	.	+	.	ID=id469;Note=PS01278 Uncharacterized protein family UPF0004 signature.;Dbxref=GeneID:1173518;gbkey=misc_feature
NC_003143.1	RefSeq	gene	738362	739195	.	-	.	ID=gene649;Name=dkgA;Dbxref=GeneID:1173519;gbkey=Gene;gene=dkgA;locus_tag=YPO0676
NC_003143.1	RefSeq	CDS	738362	739195	.	-	0	ID=cds626;Name=YP_002345742.1;Parent=gene649;Note=methylglyoxal reductase%2F%23-keto ester reductase%3B catalyzes the reduction of 2%2C5-diketo-D-gluconic acid to 2-keto-L-gulonic acid%3B also catalyzes the reduction of methylglyoxal%2C ethyl-2-methylacetoacetate and ethyl-acetoacetate;Dbxref=InterPro:IPR001395,UniProtKB%2FTrEMBL:Q0WIZ6,Genbank:YP_002345742.1,GeneID:1173519;gbkey=CDS;gene=dkgA;product=2%2C5-diketo-D-gluconate reductase A;protein_id=YP_002345742.1;transl_table=11
NC_003143.1	RefSeq	region	738464	738511	.	-	.	ID=id470;Note=PS00063 Aldo%2Fketo reductase family  active site signature.;Dbxref=GeneID:1173519;gbkey=misc_feature;gene=dkgA
NC_003143.1	RefSeq	region	738776	738829	.	-	.	ID=id471;Note=PS00062 Aldo%2Fketo reductase family signature 2.;Dbxref=GeneID:1173519;gbkey=misc_feature;gene=dkgA
NC_003143.1	RefSeq	region	739022	739075	.	-	.	ID=id472;Note=PS00798 Aldo%2Fketo reductase family signature 1.;Dbxref=GeneID:1173519;gbkey=misc_feature;gene=dkgA
NC_003143.1	RefSeq	gene	739342	739551	.	+	.	ID=gene650;Name=YPO0677;Dbxref=GeneID:1173520;gbkey=Gene;locus_tag=YPO0677
NC_003143.1	RefSeq	CDS	739342	739551	.	+	0	ID=cds627;Name=YP_002345743.1;Parent=gene650;Note=no significant database hits;Dbxref=UniProtKB%2FTrEMBL:Q7CGI1,Genbank:YP_002345743.1,GeneID:1173520;gbkey=CDS;product=hypothetical protein;protein_id=YP_002345743.1;transl_table=11
NC_003143.1	RefSeq	gene	739614	740771	.	-	.	ID=gene651;Name=YPO0678;Dbxref=GeneID:1173521;gbkey=Gene;locus_tag=YPO0678
NC_003143.1	RefSeq	CDS	739614	740771	.	-	0	ID=cds628;Name=YP_002345744.1;Parent=gene651;Dbxref=InterPro:IPR001670,UniProtKB%2FTrEMBL:Q7CGI2,Genbank:YP_002345744.1,GeneID:1173521;gbkey=CDS;product=iron-containing alcohol dehydrogenase;protein_id=YP_002345744.1;transl_table=11
NC_003143.1	RefSeq	region	739926	739988	.	-	.	ID=id473;Note=PS00060 Iron-containing alcohol dehydrogenases signature 2.;Dbxref=GeneID:1173521;gbkey=misc_feature
NC_003143.1	RefSeq	region	740175	740261	.	-	.	ID=id474;Note=PS00913 Iron-containing alcohol dehydrogenases signature 1.;Dbxref=GeneID:1173521;gbkey=misc_feature
NC_003143.1	RefSeq	gene	741169	742062	.	+	.	ID=gene652;Name=YPO0679;Dbxref=GeneID:1173522;gbkey=Gene;locus_tag=YPO0679
NC_003143.1	RefSeq	CDS	741169	742062	.	+	0	ID=cds629;Name=YP_002345745.1;Parent=gene652;Dbxref=InterPro:IPR000005,InterPro:IPR009057,InterPro:IPR009594,InterPro:IPR012287,UniProtKB%2FTrEMBL:Q7CGI3,Genbank:YP_002345745.1,GeneID:1173522;gbkey=CDS;product=AraC family transcriptional regulator;protein_id=YP_002345745.1;transl_table=11
NC_003143.1	RefSeq	region	741745	741879	.	+	.	ID=id475;Note=PS00041 Bacterial regulatory proteins%2C araC family signature.;Dbxref=GeneID:1173522;gbkey=misc_feature
NC_003143.1	RefSeq	region	741793	741858	.	+	.	ID=id476;Note=Predicted helix-turn-helix motif with score 1346 %28%2B3.77 SD%29 at aa 209-230%2C sequence LSVEQLAAEVNMSVSAFHHNFK;Dbxref=GeneID:1173522;gbkey=misc_feature
NC_003143.1	RefSeq	gene	742154	742816	.	-	.	ID=gene653;Name=YPO0680;Dbxref=GeneID:1173523;gbkey=Gene;locus_tag=YPO0680
NC_003143.1	RefSeq	CDS	742154	742816	.	-	0	ID=cds630;Name=YP_002345746.1;Parent=gene653;Dbxref=UniProtKB%2FTrEMBL:Q7CGI4,Genbank:YP_002345746.1,GeneID:1173523;gbkey=CDS;product=DedA family membrane protein;protein_id=YP_002345746.1;transl_table=11
NC_003143.1	RefSeq	gene	743009	744220	.	-	.	ID=gene654;Name=metC;Dbxref=GeneID:1173524;gbkey=Gene;gene=metC;locus_tag=YPO0681
NC_003143.1	RefSeq	CDS	743009	744220	.	-	0	ID=cds631;Name=YP_002345747.1;Parent=gene654;Note=catalyzes the formation of L-homocysteine from cystathionine;Dbxref=InterPro:IPR000277,InterPro:IPR006233,UniProtKB%2FTrEMBL:Q7CGI5,Genbank:YP_002345747.1,GeneID:1173524;gbkey=CDS;gene=metC;product=cystathionine beta-lyase;protein_id=YP_002345747.1;transl_table=11
NC_003143.1	RefSeq	region	743558	743602	.	-	.	ID=id477;Note=PS00868 Cys%2FMet metabolism enzymes pyridoxal-phosphate attachment site.;Dbxref=GeneID:1173524;gbkey=misc_feature;gene=metC
NC_003143.1	RefSeq	gene	744675	745736	.	+	.	ID=gene655;Name=YPO0682;Dbxref=GeneID:1173525;gbkey=Gene;locus_tag=YPO0682
NC_003143.1	RefSeq	CDS	744675	745736	.	+	0	ID=cds632;Name=YP_002345748.2;Parent=gene655;Dbxref=InterPro:IPR002898,UniProtKB%2FTrEMBL:Q0WIZ0,Genbank:YP_002345748.2,GeneID:1173525;gbkey=CDS;product=MotA%2FTolQ%2FExbB proton channel family protein;protein_id=YP_002345748.2;transl_table=11
NC_003143.1	RefSeq	gene	745740	746171	.	+	.	ID=gene656;Name=YPO0683;Dbxref=GeneID:1173526;gbkey=Gene;locus_tag=YPO0683
NC_003143.1	RefSeq	CDS	745740	746171	.	+	0	ID=cds633;Name=YP_002345749.1;Parent=gene656;Note=membrane spanning protein in TonB-ExbB-ExbD complex%3B involved in the tonB-independent energy-dependent transport iron-siderophore complexes and vitamin B12 into the cell;Dbxref=InterPro:IPR003400,UniProtKB%2FTrEMBL:Q7CGI6,Genbank:YP_002345749.1,GeneID:1173526;gbkey=CDS;product=biopolymer transport protein ExbD;protein_id=YP_002345749.1;transl_table=11
NC_003143.1	RefSeq	region	745797	745865	.	+	.	ID=id478;Note=1 probable transmembrane helix predicted;Dbxref=GeneID:1173526;gbkey=misc_feature
NC_003143.1	RefSeq	region	746186	756714	.	-	.	ID=id479;Note=Region of DNA with a low CG%25 content%2C 36.64%25. Possible horizontal gene transfer;gbkey=misc_feature
NC_003143.1	RefSeq	gene	746268	747824	.	-	.	ID=gene657;Name=YPO0684;Dbxref=GeneID:1173527;gbkey=Gene;locus_tag=YPO0684
NC_003143.1	RefSeq	CDS	746268	747824	.	-	0	ID=cds634;Name=YP_002345750.1;Parent=gene657;Dbxref=InterPro:IPR002035,UniProtKB%2FTrEMBL:Q7CGI7,Genbank:YP_002345750.1,GeneID:1173527;gbkey=CDS;product=hypothetical protein;protein_id=YP_002345750.1;transl_table=11
NC_003143.1	RefSeq	region	747687	747752	.	-	.	ID=id480;Note=1 probable transmembrane helix predicted;Dbxref=GeneID:1173527;gbkey=misc_feature
NC_003143.1	RefSeq	gene	747849	748355	.	-	.	ID=gene658;Name=YPO0685;Dbxref=GeneID:1173528;gbkey=Gene;locus_tag=YPO0685
NC_003143.1	RefSeq	CDS	747849	748355	.	-	0	ID=cds635;Name=YP_002345751.1;Parent=gene658;Dbxref=UniProtKB%2FTrEMBL:Q0WIY7,Genbank:YP_002345751.1,GeneID:1173528;gbkey=CDS;product=hypothetical protein;protein_id=YP_002345751.1;transl_table=11
NC_003143.1	RefSeq	gene	748405	748875	.	-	.	ID=gene659;Name=YPO0686;Dbxref=GeneID:1173529;gbkey=Gene;locus_tag=YPO0686
NC_003143.1	RefSeq	CDS	748405	748875	.	-	0	ID=cds636;Name=YP_002345752.1;Parent=gene659;Dbxref=InterPro:IPR012495,UniProtKB%2FTrEMBL:Q0WIY6,Genbank:YP_002345752.1,GeneID:1173529;gbkey=CDS;product=hypothetical protein;protein_id=YP_002345752.1;transl_table=11
NC_003143.1	RefSeq	region	748771	748836	.	-	.	ID=id481;Note=1 probable transmembrane helix predicted;Dbxref=GeneID:1173529;gbkey=misc_feature
NC_003143.1	RefSeq	gene	748875	749609	.	-	.	ID=gene660;Name=YPO0687;Dbxref=GeneID:1173530;gbkey=Gene;locus_tag=YPO0687
NC_003143.1	RefSeq	CDS	748875	749609	.	-	0	ID=cds637;Name=YP_002345753.1;Parent=gene660;Dbxref=InterPro:IPR011990,UniProtKB%2FTrEMBL:Q0WIY5,Genbank:YP_002345753.1,GeneID:1173530;gbkey=CDS;product=hypothetical protein;protein_id=YP_002345753.1;transl_table=11
NC_003143.1	RefSeq	gene	749629	750462	.	-	.	ID=gene661;Name=YPO0688;Dbxref=GeneID:1173531;gbkey=Gene;locus_tag=YPO0688
NC_003143.1	RefSeq	CDS	749629	750462	.	-	0	ID=cds638;Name=YP_002345754.1;Parent=gene661;Dbxref=InterPro:IPR001992,UniProtKB%2FTrEMBL:Q7CGI8,Genbank:YP_002345754.1,GeneID:1173531;gbkey=CDS;product=hypothetical protein;protein_id=YP_002345754.1;transl_table=11
NC_003143.1	RefSeq	gene	750459	751334	.	-	.	ID=gene662;Name=YPO0689;Dbxref=GeneID:1173532;gbkey=Gene;locus_tag=YPO0689
NC_003143.1	RefSeq	CDS	750459	751334	.	-	0	ID=cds639;Name=YP_002345755.1;Parent=gene662;Dbxref=InterPro:IPR001992,UniProtKB%2FTrEMBL:Q74RM1,Genbank:YP_002345755.1,GeneID:1173532;gbkey=CDS;product=hypothetical protein;protein_id=YP_002345755.1;transl_table=11
NC_003143.1	RefSeq	gene	751331	752617	.	-	.	ID=gene663;Name=YPO0690;Dbxref=GeneID:1173533;gbkey=Gene;locus_tag=YPO0690
NC_003143.1	RefSeq	CDS	751331	752617	.	-	0	ID=cds640;Name=YP_002345756.1;Parent=gene663;Dbxref=InterPro:IPR000217,InterPro:IPR001482,UniProtKB%2FTrEMBL:Q7CGI9,Genbank:YP_002345756.1,GeneID:1173533;gbkey=CDS;product=type II secretion protein;protein_id=YP_002345756.1;transl_table=11
NC_003143.1	RefSeq	region	751982	752005	.	-	.	ID=id482;Note=PS00017 ATP%2FGTP-binding site motif A %28P-loop%29.;Dbxref=GeneID:1173533;gbkey=misc_feature
NC_003143.1	RefSeq	gene	752629	753861	.	-	.	ID=gene664;Name=YPO0691;Dbxref=GeneID:1173534;gbkey=Gene;locus_tag=YPO0691
NC_003143.1	RefSeq	CDS	752629	753861	.	-	0	ID=cds641;Name=YP_002345757.1;Parent=gene664;Dbxref=UniProtKB%2FTrEMBL:Q7CGJ0,Genbank:YP_002345757.1,GeneID:1173534;gbkey=CDS;product=hypothetical protein;protein_id=YP_002345757.1;transl_table=11
NC_003143.1	RefSeq	gene	754057	755372	.	-	.	ID=gene665;Name=YPO0692;Dbxref=GeneID:1173535;gbkey=Gene;locus_tag=YPO0692;pseudo=true
NC_003143.1	RefSeq	region	755283	755333	.	-	.	ID=id483;Note=1 probable transmembrane helix predicted;Dbxref=GeneID:1173535;gbkey=misc_feature
NC_003143.1	RefSeq	gene	755369	756235	.	-	.	ID=gene666;Name=YPO0694;Dbxref=GeneID:1173536;gbkey=Gene;locus_tag=YPO0694
NC_003143.1	RefSeq	CDS	755369	756235	.	-	0	ID=cds642;Name=YP_002345758.1;Parent=gene666;Dbxref=UniProtKB%2FTrEMBL:Q7CGJ1,Genbank:YP_002345758.1,GeneID:1173536;gbkey=CDS;product=hypothetical protein;protein_id=YP_002345758.1;transl_table=11
NC_003143.1	RefSeq	region	756167	756220	.	-	.	ID=id484;Note=1 probable transmembrane helix predicted;Dbxref=GeneID:1173536;gbkey=misc_feature
NC_003143.1	RefSeq	gene	756287	756709	.	-	.	ID=gene667;Name=YPO0695;Dbxref=GeneID:1173537;gbkey=Gene;locus_tag=YPO0695
NC_003143.1	RefSeq	CDS	756287	756709	.	-	0	ID=cds643;Name=YP_002345759.1;Parent=gene667;Dbxref=InterPro:IPR000045,UniProtKB%2FTrEMBL:Q7CGJ2,Genbank:YP_002345759.1,GeneID:1173537;gbkey=CDS;product=hypothetical protein;protein_id=YP_002345759.1;transl_table=11
NC_003143.1	RefSeq	repeat_region	756764	757475	.	+	.	ID=id485;Note=Contains a %27G%27 at nucleotide position 315%7EIS200-like insertion sequence:IS1541;gbkey=repeat_region
NC_003143.1	RefSeq	gene	756909	757367	.	+	.	ID=gene668;Name=tnp;Dbxref=GeneID:1173539;gbkey=Gene;gene=tnp;locus_tag=YPO0696
NC_003143.1	RefSeq	CDS	756909	757367	.	+	0	ID=cds644;Name=YP_002345760.1;Parent=gene668;Dbxref=InterPro:IPR002686,UniProtKB%2FTrEMBL:Q74YM6,Genbank:YP_002345760.1,GeneID:1173539;gbkey=CDS;gene=tnp;product=transposase for the IS1541 insertion element;protein_id=YP_002345760.1;transl_table=11
NC_003143.1	RefSeq	repeat_region	757474	758185	.	+	.	ID=id486;Note=Contains a %27A%27 at nucleotide position 315%7EIS200-like insertion sequence:IS1541;gbkey=repeat_region
NC_003143.1	RefSeq	gene	757619	758077	.	+	.	ID=gene669;Name=tnp;Dbxref=GeneID:1173538;gbkey=Gene;gene=tnp;locus_tag=YPO0697
NC_003143.1	RefSeq	CDS	757619	758077	.	+	0	ID=cds645;Name=YP_002345761.1;Parent=gene669;Dbxref=InterPro:IPR002686,UniProtKB%2FTrEMBL:Q56938,Genbank:YP_002345761.1,GeneID:1173538;gbkey=CDS;gene=tnp;product=transposase for the IS1541 insertion element;protein_id=YP_002345761.1;transl_table=11
NC_003143.1	RefSeq	gene	758430	760910	.	+	.	ID=gene670;Name=YPO0698;Dbxref=GeneID:1173540;gbkey=Gene;locus_tag=YPO0698
NC_003143.1	RefSeq	CDS	758430	760910	.	+	0	ID=cds646;Name=YP_002345762.1;Parent=gene670;Dbxref=InterPro:IPR000015,UniProtKB%2FTrEMBL:Q7CGJ4,Genbank:YP_002345762.1,GeneID:1173540;gbkey=CDS;product=outer membrane usher protein;protein_id=YP_002345762.1;transl_table=11
NC_003143.1	RefSeq	gene	760928	761647	.	+	.	ID=gene671;Name=YPO0699;Dbxref=GeneID:1173541;gbkey=Gene;locus_tag=YPO0699
NC_003143.1	RefSeq	CDS	760928	761647	.	+	0	ID=cds647;Name=YP_002345763.1;Parent=gene671;Dbxref=InterPro:IPR001829,InterPro:IPR008962,UniProtKB%2FTrEMBL:Q7CGJ5,Genbank:YP_002345763.1,GeneID:1173541;gbkey=CDS;product=fimbrial chaperone protein;protein_id=YP_002345763.1;transl_table=11
NC_003143.1	RefSeq	region	761222	761275	.	+	.	ID=id487;Note=PS00635 Gram-negative pili assembly chaperone signature.;Dbxref=GeneID:1173541;gbkey=misc_feature
NC_003143.1	RefSeq	region	761453	761476	.	+	.	ID=id488;Note=PS00017 ATP%2FGTP-binding site motif A %28P-loop%29.;Dbxref=GeneID:1173541;gbkey=misc_feature
NC_003143.1	RefSeq	gene	761672	762778	.	+	.	ID=gene672;Name=YPO0700;Dbxref=GeneID:1173542;gbkey=Gene;locus_tag=YPO0700
NC_003143.1	RefSeq	CDS	761672	762778	.	+	0	ID=cds648;Name=YP_002345764.1;Parent=gene672;Dbxref=InterPro:IPR000259,InterPro:IPR008966,UniProtKB%2FTrEMBL:Q7CGJ6,Genbank:YP_002345764.1,GeneID:1173542;gbkey=CDS;product=fimbrial protein;protein_id=YP_002345764.1;transl_table=11
NC_003143.1	RefSeq	gene	762990	764003	.	-	.	ID=gene673;Name=YPO0701;Dbxref=GeneID:1173543;gbkey=Gene;locus_tag=YPO0701
NC_003143.1	RefSeq	CDS	762990	764003	.	-	0	ID=cds649;Name=YP_002345765.1;Parent=gene673;Note=with FepCDG is involved in the transport of ferric enterobactin;Dbxref=InterPro:IPR002491,UniProtKB%2FTrEMBL:Q0WIX3,Genbank:YP_002345765.1,GeneID:1173543;gbkey=CDS;product=iron-enterobactin transporter substrate-binding protein;protein_id=YP_002345765.1;transl_table=11
NC_003143.1	RefSeq	region	763209	763232	.	-	.	ID=id489;Note=PS00017 ATP%2FGTP-binding site motif A %28P-loop%29.;Dbxref=GeneID:1173543;gbkey=misc_feature
NC_003143.1	RefSeq	region	764010	764922	.	-	.	ID=id490;Note=Region of noncoding DNA with a low GC%25 content%2C27.6%25;gbkey=misc_feature
NC_003143.1	RefSeq	gene	764925	765920	.	+	.	ID=gene674;Name=YPO0702;Dbxref=GeneID:1173544;gbkey=Gene;locus_tag=YPO0702
NC_003143.1	RefSeq	CDS	764925	765920	.	+	0	ID=cds650;Name=YP_002345766.1;Parent=gene674;Dbxref=UniProtKB%2FTrEMBL:Q7CGJ7,Genbank:YP_002345766.1,GeneID:1173544;gbkey=CDS;product=hypothetical protein;protein_id=YP_002345766.1;transl_table=11
NC_003143.1	RefSeq	gene	766012	766581	.	-	.	ID=gene675;Name=YPO0703;Dbxref=GeneID:1173545;gbkey=Gene;locus_tag=YPO0703
NC_003143.1	RefSeq	CDS	766012	766581	.	-	0	ID=cds651;Name=YP_002345767.1;Parent=gene675;Dbxref=UniProtKB%2FTrEMBL:Q0WIX1,Genbank:YP_002345767.1,GeneID:1173545;gbkey=CDS;product=lipoprotein;protein_id=YP_002345767.1;transl_table=11
NC_003143.1	RefSeq	region	766528	766560	.	-	.	ID=id491;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site.;Dbxref=GeneID:1173545;gbkey=misc_feature
NC_003143.1	RefSeq	gene	766796	768887	.	-	.	ID=gene676;Name=YPO0704;Dbxref=GeneID:1173546;gbkey=Gene;locus_tag=YPO0704;pseudo=true
NC_003143.1	RefSeq	region	768393	768464	.	-	.	ID=id492;Note=PS00994 Bacterial export FHIPEP family signature.;Dbxref=GeneID:1173546;gbkey=misc_feature
NC_003143.1	RefSeq	gene	768877	770010	.	-	.	ID=gene677;Name=flhB;Dbxref=GeneID:1173547;gbkey=Gene;gene=flhB;locus_tag=YPO0706
NC_003143.1	RefSeq	CDS	768877	770010	.	-	0	ID=cds652;Name=YP_002345768.1;Parent=gene677;Note=membrane protein responsible for substrate specificity switching from rod%2Fhook-type export to filament-type export;Dbxref=InterPro:IPR006135,InterPro:IPR006136,UniProtKB%2FTrEMBL:Q3V8F5,Genbank:YP_002345768.1,GeneID:1173547;gbkey=CDS;gene=flhB;product=flagellar biosynthesis protein FlhB;protein_id=YP_002345768.1;transl_table=11
NC_003143.1	RefSeq	gene	770010	770783	.	-	.	ID=gene678;Name=fliR;Dbxref=GeneID:1173548;gbkey=Gene;gene=fliR;gene_synonym=mopE;locus_tag=YPO0707
NC_003143.1	RefSeq	CDS	770010	770783	.	-	0	ID=cds653;Name=YP_002345769.1;Parent=gene678;Dbxref=InterPro:IPR002010,InterPro:IPR006303,UniProtKB%2FTrEMBL:Q1MVQ2,Genbank:YP_002345769.1,GeneID:1173548;gbkey=CDS;gene=fliR;product=flagellar assembly protein;protein_id=YP_002345769.1;transl_table=11
NC_003143.1	RefSeq	gene	770790	771059	.	-	.	ID=gene679;Name=fliQ;Dbxref=GeneID:1173549;gbkey=Gene;gene=fliQ;locus_tag=YPO0708
NC_003143.1	RefSeq	CDS	770790	771059	.	-	0	ID=cds654;Name=YP_002345770.1;Parent=gene679;Dbxref=InterPro:IPR002191,InterPro:IPR006305,UniProtKB%2FTrEMBL:Q0WIW8,Genbank:YP_002345770.1,GeneID:1173549;gbkey=CDS;gene=fliQ;product=flagellar assembly protein;protein_id=YP_002345770.1;transl_table=11
NC_003143.1	RefSeq	gene	771064	771834	.	-	.	ID=gene680;Name=fliP;Dbxref=GeneID:1173550;gbkey=Gene;gene=fliP;locus_tag=YPO0709
NC_003143.1	RefSeq	CDS	771064	771834	.	-	0	ID=cds655;Name=YP_002345771.1;Parent=gene680;Note=FliP%2C with proteins FliQ and FliR%2C forms the core of the central channel in the flagella export apparatus;Dbxref=InterPro:IPR005837,InterPro:IPR005838,UniProtKB%2FTrEMBL:Q7CGJ8,Genbank:YP_002345771.1,GeneID:1173550;gbkey=CDS;gene=fliP;product=flagellar biosynthesis protein FliP;protein_id=YP_002345771.1;transl_table=11
NC_003143.1	RefSeq	region	771244	771291	.	-	.	ID=id493;Note=PS01060 Flagella transport protein fliP family signature 1.;Dbxref=GeneID:1173550;gbkey=misc_feature;gene=fliP
NC_003143.1	RefSeq	gene	771831	772244	.	-	.	ID=gene681;Name=fliN;Dbxref=GeneID:1173551;gbkey=Gene;gene=fliN;gene_synonym=mopA;locus_tag=YPO0710
NC_003143.1	RefSeq	CDS	771831	772244	.	-	0	ID=cds656;Name=YP_002345772.1;Parent=gene681;Dbxref=InterPro:IPR001172,InterPro:IPR001543,InterPro:IPR012826,UniProtKB%2FTrEMBL:Q7CGJ9,Genbank:YP_002345772.1,GeneID:1173551;gbkey=CDS;gene=fliN;product=flagellar switch protein;protein_id=YP_002345772.1;transl_table=11
NC_003143.1	RefSeq	gene	772237	773148	.	-	.	ID=gene682;Name=fliM;Dbxref=GeneID:1173552;gbkey=Gene;gene=fliM;locus_tag=YPO0711
NC_003143.1	RefSeq	CDS	772237	773148	.	-	0	ID=cds657;Name=YP_002345773.1;Parent=gene682;Dbxref=UniProtKB%2FTrEMBL:Q0WIW5,Genbank:YP_002345773.1,GeneID:1173552;gbkey=CDS;gene=fliM;product=flagellar motor switch protein;protein_id=YP_002345773.1;transl_table=11
NC_003143.1	RefSeq	gene	773659	774687	.	+	.	ID=gene683;Name=flbD;Dbxref=GeneID:1173553;gbkey=Gene;gene=flbD;gene_synonym=fleR;locus_tag=YPO0712
NC_003143.1	RefSeq	CDS	773659	774687	.	+	0	ID=cds658;Name=YP_002345774.1;Parent=gene683;Dbxref=InterPro:IPR002078,InterPro:IPR002197,InterPro:IPR003593,InterPro:IPR009057,UniProtKB%2FTrEMBL:Q7CGK0,Genbank:YP_002345774.1,GeneID:1173553;gbkey=CDS;gene=flbD;product=Fis family transcriptional regulator;protein_id=YP_002345774.1;transl_table=11
NC_003143.1	RefSeq	region	773776	773817	.	+	.	ID=id494;Note=PS00675 Sigma-54 interaction domain ATP-binding region A signature.;Dbxref=GeneID:1173553;gbkey=misc_feature;gene=flbD
NC_003143.1	RefSeq	region	773962	774009	.	+	.	ID=id495;Note=PS00676 Sigma-54 interaction domain ATP-binding region B signature.;Dbxref=GeneID:1173553;gbkey=misc_feature;gene=flbD
NC_003143.1	RefSeq	region	774340	774369	.	+	.	ID=id496;Note=PS00688 Sigma-54 interaction domain C-terminal part signature.;Dbxref=GeneID:1173553;gbkey=misc_feature;gene=flbD
NC_003143.1	RefSeq	region	774580	774645	.	+	.	ID=id497;Note=Predicted helix-turn-helix motif with score 1434 %28%2B4.07 SD%29 at aa 308-329%2C sequence GNKSKTAAFLGITPRALRYRLA;Dbxref=GeneID:1173553;gbkey=misc_feature;gene=flbD
NC_003143.1	RefSeq	gene	774704	775084	.	+	.	ID=gene684;Name=fliE;Dbxref=GeneID:1173554;gbkey=Gene;gene=fliE;locus_tag=YPO0713
NC_003143.1	RefSeq	CDS	774704	775084	.	+	0	ID=cds659;Name=YP_002345775.1;Parent=gene684;Dbxref=InterPro:IPR001624,UniProtKB%2FTrEMBL:Q7CGK1,Genbank:YP_002345775.1,GeneID:1173554;gbkey=CDS;gene=fliE;product=flagellar hook-basal body complex protein;protein_id=YP_002345775.1;transl_table=11
NC_003143.1	RefSeq	gene	775094	776734	.	+	.	ID=gene685;Name=fliF;Dbxref=GeneID:1173555;gbkey=Gene;gene=fliF;locus_tag=YPO0714
NC_003143.1	RefSeq	CDS	775094	776734	.	+	0	ID=cds660;Name=YP_002345776.1;Parent=gene685;Note=the MS-ring anchors the flagellum to the cytoplasmic membrane%3B part of the flagellar basal body which consists of four rings L%2C P%2C S%2C and M mounted on a central rod%3B the Vibrio parahaemolyticus protein is associated with the lateral flagella;Dbxref=InterPro:IPR000067,InterPro:IPR006182,InterPro:IPR013556,UniProtKB%2FTrEMBL:Q7CGK2,Genbank:YP_002345776.1,GeneID:1173555;gbkey=CDS;gene=fliF;product=flagellar MS-ring protein;protein_id=YP_002345776.1;transl_table=11
NC_003143.1	RefSeq	gene	776706	777749	.	+	.	ID=gene686;Name=fliG;Dbxref=GeneID:1173556;gbkey=Gene;gene=fliG;locus_tag=YPO0715
NC_003143.1	RefSeq	CDS	776706	777749	.	+	0	ID=cds661;Name=YP_002345777.1;Parent=gene686;Note=One of three proteins involved in switching the direction of the flagellar rotation;Dbxref=InterPro:IPR000090,InterPro:IPR011002,UniProtKB%2FTrEMBL:Q0WIW1,Genbank:YP_002345777.1,GeneID:1173556;gbkey=CDS;gene=fliG;product=flagellar motor switch protein G;protein_id=YP_002345777.1;transl_table=11
NC_003143.1	RefSeq	gene	777751	778470	.	+	.	ID=gene687;Name=fliH;Dbxref=GeneID:1173557;gbkey=Gene;gene=fliH;locus_tag=YPO0716
NC_003143.1	RefSeq	CDS	777751	778470	.	+	0	ID=cds662;Name=YP_002345778.1;Parent=gene687;Note=binds to and inhibits the function of flagella specific ATPase FliI;Dbxref=InterPro:IPR000563,UniProtKB%2FTrEMBL:Q0WIW0,Genbank:YP_002345778.1,GeneID:1173557;gbkey=CDS;gene=fliH;product=flagellar assembly protein H;protein_id=YP_002345778.1;transl_table=11
NC_003143.1	RefSeq	gene	778463	779803	.	+	.	ID=gene688;Name=fliI;Dbxref=GeneID:1173558;gbkey=Gene;gene=fliI;gene_synonym=flaC,fliI;locus_tag=YPO0717
NC_003143.1	RefSeq	CDS	778463	779803	.	+	0	ID=cds663;Name=YP_002345779.1;Parent=gene688;Note=involved in type III protein export during flagellum assembly;Dbxref=InterPro:IPR000194,InterPro:IPR003593,InterPro:IPR005714,UniProtKB%2FTrEMBL:Q7CGK3,Genbank:YP_002345779.1,GeneID:1173558;gbkey=CDS;gene=fliI;product=flagellum-specific ATP synthase;protein_id=YP_002345779.1;transl_table=11
NC_003143.1	RefSeq	region	778961	778984	.	+	.	ID=id498;Note=PS00017 ATP%2FGTP-binding site motif A %28P-loop%29.;Dbxref=GeneID:1173558;gbkey=misc_feature;gene=fliI
NC_003143.1	RefSeq	region	779504	779533	.	+	.	ID=id499;Note=PS00152 ATP synthase alpha and beta subunits signature.;Dbxref=GeneID:1173558;gbkey=misc_feature;gene=fliI
NC_003143.1	RefSeq	gene	779816	780190	.	+	.	ID=gene689;Name=YPO0718;Dbxref=GeneID:1173559;gbkey=Gene;locus_tag=YPO0718
NC_003143.1	RefSeq	CDS	779816	780190	.	+	0	ID=cds664;Name=YP_002345780.1;Parent=gene689;Note=no significant database hits. Glutamine rich protein%2C 22 out of the 124 amino acids are glutamine residues %2822%25 of the protein%29;Dbxref=InterPro:IPR012823,UniProtKB%2FTrEMBL:Q0WIV8,Genbank:YP_002345780.1,GeneID:1173559;gbkey=CDS;product=hypothetical protein;protein_id=YP_002345780.1;transl_table=11
NC_003143.1	RefSeq	gene	780518	780943	.	-	.	ID=gene690;Name=YPO0719;Dbxref=GeneID:1173560;gbkey=Gene;locus_tag=YPO0719
NC_003143.1	RefSeq	CDS	780518	780943	.	-	0	ID=cds665;Name=YP_002345781.2;Parent=gene690;Dbxref=UniProtKB%2FTrEMBL:Q0WIV7,Genbank:YP_002345781.2,GeneID:1173560;gbkey=CDS;product=hypothetical protein;protein_id=YP_002345781.2;transl_table=11
NC_003143.1	RefSeq	gene	780950	781216	.	-	.	ID=gene691;Name=YPO0720;Dbxref=GeneID:1173561;gbkey=Gene;locus_tag=YPO0720
NC_003143.1	RefSeq	CDS	780950	781216	.	-	0	ID=cds666;Name=YP_002345782.1;Parent=gene691;Dbxref=UniProtKB%2FTrEMBL:Q7CGK4,Genbank:YP_002345782.1,GeneID:1173561;gbkey=CDS;product=flagellar regulatory protein;protein_id=YP_002345782.1;transl_table=11
NC_003143.1	RefSeq	gene	781445	782362	.	-	.	ID=gene692;Name=flgA;Dbxref=GeneID:1173562;gbkey=Gene;gene=flgA;locus_tag=YPO0721
NC_003143.1	RefSeq	CDS	781445	782362	.	-	0	ID=cds667;Name=YP_002345783.2;Parent=gene692;Note=required for the assembly of the flagellar basal body P-ring%3B the Vibrio parahaemolyticus protein involved with the synthesis of the lateral flagella;Dbxref=InterPro:IPR013974,UniProtKB%2FTrEMBL:Q0WIV5,Genbank:YP_002345783.2,GeneID:1173562;gbkey=CDS;gene=flgA;product=flagellar basal body P-ring biosynthesis protein FlgA;protein_id=YP_002345783.2;transl_table=11
NC_003143.1	RefSeq	gene	782351	782797	.	+	.	ID=gene693;Name=flgB;Dbxref=GeneID:1173563;gbkey=Gene;gene=flgB;gene_synonym=lfgB;locus_tag=YPO0722
NC_003143.1	RefSeq	CDS	782351	782797	.	+	0	ID=cds668;Name=YP_002345784.1;Parent=gene693;Note=with FlgF and C makes up the proximal portion of the flagellar basal body rod%3B Yersinia has 2 copies of flgB and other flagellar genes;Dbxref=InterPro:IPR001444,InterPro:IPR006300,UniProtKB%2FTrEMBL:Q7CGK5,Genbank:YP_002345784.1,GeneID:1173563;gbkey=CDS;gene=flgB;product=flagellar basal-body rod protein FlgB;protein_id=YP_002345784.1;transl_table=11
NC_003143.1	RefSeq	region	782393	782455	.	+	.	ID=id500;Note=PS00588 Flagella basal body rod proteins signature.;Dbxref=GeneID:1173563;gbkey=misc_feature;gene=flgB
NC_003143.1	RefSeq	gene	782800	783225	.	+	.	ID=gene694;Name=flgC;Dbxref=GeneID:1173564;gbkey=Gene;gene=flgC;gene_synonym=lfgC;locus_tag=YPO0723
NC_003143.1	RefSeq	CDS	782800	783225	.	+	0	ID=cds669;Name=YP_002345785.1;Parent=gene694;Note=with FlgF and C makes up the proximal portion of the flagellar basal body rod%3B Vibrio parahaemolyticus protein is associated with the lateral flagella;Dbxref=InterPro:IPR001444,InterPro:IPR006299,InterPro:IPR010930,UniProtKB%2FTrEMBL:Q7CGK6,Genbank:YP_002345785.1,GeneID:1173564;gbkey=CDS;gene=flgC;product=flagellar basal body rod protein FlgC;protein_id=YP_002345785.1;transl_table=11
NC_003143.1	RefSeq	gene	783228	783884	.	+	.	ID=gene695;Name=flgD;Dbxref=GeneID:1173565;gbkey=Gene;gene=flgD;gene_synonym=lfgD;locus_tag=YPO0724
NC_003143.1	RefSeq	CDS	783228	783884	.	+	0	ID=cds670;Name=YP_002345786.1;Parent=gene695;Note=acts as a scaffold for the assembly of hook proteins onto the flagellar basal body rod%3B Yersinia%2C Vibrio parahaemolyticus%2C Bradyrhizobium and other organisms have 2 copies of some flagellar genes%3B Vibrio parahaemolyticus protein in this cluster is associated with lateral flagella production;Dbxref=InterPro:IPR005648,UniProtKB%2FTrEMBL:Q7CGK7,Genbank:YP_002345786.1,GeneID:1173565;gbkey=CDS;gene=flgD;product=flagellar basal body rod modification protein;protein_id=YP_002345786.1;transl_table=11
NC_003143.1	RefSeq	gene	783939	785180	.	+	.	ID=gene696;Name=flgE;Dbxref=GeneID:1173566;gbkey=Gene;gene=flgE;gene_synonym=lfgE;locus_tag=YPO0725
NC_003143.1	RefSeq	CDS	783939	785180	.	+	0	ID=cds671;Name=YP_002345787.1;Parent=gene696;Note=the hook connects flagellar basal body to the flagellar filament%3B Vibrio parahaemolyticus protein is associated with the lateral flagella;Dbxref=InterPro:IPR001444,InterPro:IPR010930,InterPro:IPR011491,UniProtKB%2FTrEMBL:Q7CGK8,Genbank:YP_002345787.1,GeneID:1173566;gbkey=CDS;gene=flgE;product=flagellar hook protein FlgE;protein_id=YP_002345787.1;transl_table=11
NC_003143.1	RefSeq	region	783963	784025	.	+	.	ID=id501;Note=PS00588 Flagella basal body rod proteins signature.;Dbxref=GeneID:1173566;gbkey=misc_feature;gene=flgE
NC_003143.1	RefSeq	gene	785180	786619	.	+	.	ID=gene697;Name=flgF;Dbxref=GeneID:1173567;gbkey=Gene;gene=flgF;locus_tag=YPO0727;pseudo=true
NC_003143.1	RefSeq	region	785180	785293	.	+	.	ID=id502;Note=Similar to Escherichia coli flagellar basal-body rod protein FlgF SW:FLGF_ECOLI %28P75938%29 %28251 aa%29 fasta scores: E%28%29: 4.6e-27%2C 37.8%25 id in 251 aa%2C and to Vibrio cholerae flagellar basal-body rod protein FlgF TR:Q9KQ11 %28EMBL:AE004291%29 %28249 aa%29 fasta scores: E%28%29: 1.1e-29%2C 42.0%25 id in 250 aa. CDS disrupted by insertion of IS200-like element at codon 39.;Dbxref=GeneID:1173567;gbkey=misc_feature;gene=flgF;part=1%2F2;pseudo=true
NC_003143.1	RefSeq	region	786008	786619	.	+	.	ID=id502;Note=Similar to Escherichia coli flagellar basal-body rod protein FlgF SW:FLGF_ECOLI %28P75938%29 %28251 aa%29 fasta scores: E%28%29: 4.6e-27%2C 37.8%25 id in 251 aa%2C and to Vibrio cholerae flagellar basal-body rod protein FlgF TR:Q9KQ11 %28EMBL:AE004291%29 %28249 aa%29 fasta scores: E%28%29: 1.1e-29%2C 42.0%25 id in 250 aa. CDS disrupted by insertion of IS200-like element at codon 39.;Dbxref=GeneID:1173567;gbkey=misc_feature;gene=flgF;part=2%2F2;pseudo=true
NC_003143.1	RefSeq	repeat_region	785296	786007	.	-	.	ID=id503;Note=Contains a %27A%27 at nucleotide position 315%7EIS200-like insertion sequence:IS1541;gbkey=repeat_region;gene=flgF
NC_003143.1	RefSeq	gene	785404	785862	.	-	.	ID=gene698;Name=tnp;Dbxref=GeneID:1173568;gbkey=Gene;gene=tnp;locus_tag=YPO0726
NC_003143.1	RefSeq	CDS	785404	785862	.	-	0	ID=cds672;Name=YP_002345788.1;Parent=gene698;Dbxref=InterPro:IPR002686,UniProtKB%2FTrEMBL:Q56938,Genbank:YP_002345788.1,GeneID:1173568;gbkey=CDS;gene=tnp;product=transposase for the IS1541 insertion element;protein_id=YP_002345788.1;transl_table=11
NC_003143.1	RefSeq	gene	786690	787475	.	+	.	ID=gene699;Name=flgG;Dbxref=GeneID:1173569;gbkey=Gene;gene=flgG;locus_tag=YPO0728
NC_003143.1	RefSeq	CDS	786690	787475	.	+	0	ID=cds673;Name=YP_002345789.1;Parent=gene699;Note=makes up the distal portion of the flagellar basal body rod;Dbxref=InterPro:IPR001444,InterPro:IPR010930,InterPro:IPR012834,UniProtKB%2FTrEMBL:Q7CGK9,Genbank:YP_002345789.1,GeneID:1173569;gbkey=CDS;gene=flgG;product=flagellar basal body rod protein FlgG;protein_id=YP_002345789.1;transl_table=11
NC_003143.1	RefSeq	region	786720	786782	.	+	.	ID=id504;Note=PS00588 Flagella basal body rod proteins signature.;Dbxref=GeneID:1173569;gbkey=misc_feature;gene=flgG
NC_003143.1	RefSeq	gene	787510	788175	.	+	.	ID=gene700;Name=flgH;Dbxref=GeneID:1173570;gbkey=Gene;gene=flgH;locus_tag=YPO0729
NC_003143.1	RefSeq	CDS	787510	788175	.	+	0	ID=cds674;Name=YP_002345790.1;Parent=gene700;Note=part of the basal body which consists of four rings L%2C P%2C S%2C and M mounted on a central rod%3B the Yersinia have 2 copies of flgH;Dbxref=InterPro:IPR000527,UniProtKB%2FTrEMBL:Q0WIU8,Genbank:YP_002345790.1,GeneID:1173570;gbkey=CDS;gene=flgH;product=flagellar basal body L-ring protein;protein_id=YP_002345790.1;transl_table=11
NC_003143.1	RefSeq	region	787528	787560	.	+	.	ID=id505;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site.;Dbxref=GeneID:1173570;gbkey=misc_feature;gene=flgH
NC_003143.1	RefSeq	gene	788252	789364	.	+	.	ID=gene701;Name=flgI;Dbxref=GeneID:1173571;gbkey=Gene;gene=flgI;locus_tag=YPO0730
NC_003143.1	RefSeq	CDS	788252	789364	.	+	0	ID=cds675;Name=YP_002345791.1;Parent=gene701;Note=part of the basal body which consists of four rings L%2C P%2C S%2C and M mounted on a central rod%3B Vibrio parahaemolyticus%2C Yersinia%2C Bradyrhizobium and other bacteria have two copies of this and other flagellar genes%3B the V. parahaemolyticus protein is associated with the polar flagella and the Bradyrhizobium protein is associated with the thick flagellum;Dbxref=InterPro:IPR001782,Genbank:YP_002345791.1,GeneID:1173571;gbkey=CDS;gene=flgI;product=flagellar basal body P-ring biosynthesis protein FlgA;protein_id=YP_002345791.1;transl_table=11
NC_003143.1	RefSeq	gene	789374	789667	.	+	.	ID=gene702;Name=flgJ;Dbxref=GeneID:1173572;gbkey=Gene;gene=flgJ;locus_tag=YPO0731
NC_003143.1	RefSeq	CDS	789374	789667	.	+	0	ID=cds676;Name=YP_002345792.1;Parent=gene702;Note=FlgJ%3B flagellum-specific muramidase which hydrolyzes the peptidoglycan layer to assemble the rod structure in the periplasmic space%3B like the lateral flagella FlgJ in Vibrio parahaemolyticus this protein does not contains a C-terminal muramidase domain;Dbxref=UniProtKB%2FTrEMBL:Q7CGL1,Genbank:YP_002345792.1,GeneID:1173572;gbkey=CDS;gene=flgJ;product=peptidoglycan hydrolase;protein_id=YP_002345792.1;transl_table=11
NC_003143.1	RefSeq	gene	789780	791141	.	+	.	ID=gene703;Name=flgK;Dbxref=GeneID:1173573;gbkey=Gene;gene=flgK;locus_tag=YPO0732
NC_003143.1	RefSeq	CDS	789780	791141	.	+	0	ID=cds677;Name=YP_002345793.1;Parent=gene703;Note=with FlgL acts as a hook filament junction protein to join the flagellar filament to the hook;Dbxref=InterPro:IPR001444,InterPro:IPR002371,InterPro:IPR010930,UniProtKB%2FTrEMBL:Q7CGL2,Genbank:YP_002345793.1,GeneID:1173573;gbkey=CDS;gene=flgK;product=flagellar hook-associated protein FlgK;protein_id=YP_002345793.1;transl_table=11
NC_003143.1	RefSeq	gene	791170	792093	.	+	.	ID=gene704;Name=flgL;Dbxref=GeneID:1173574;gbkey=Gene;gene=flgL;locus_tag=YPO0733
NC_003143.1	RefSeq	CDS	791170	792093	.	+	0	ID=cds678;Name=YP_002345794.1;Parent=gene704;Note=with FlgK acts as a hook filament junction protein to join the flagellar filament to the hook%3B in Vibrio parahaemolyticus the protein in this cluster is associated with the lateral flagella;Dbxref=InterPro:IPR001029,InterPro:IPR013384,UniProtKB%2FTrEMBL:Q0WIU4,Genbank:YP_002345794.1,GeneID:1173574;gbkey=CDS;gene=flgL;product=flagellar hook-associated protein FlgL;protein_id=YP_002345794.1;transl_table=11
NC_003143.1	RefSeq	gene	792138	793118	.	+	.	ID=gene705;Name=YPO0734;Dbxref=GeneID:1173575;gbkey=Gene;locus_tag=YPO0734
NC_003143.1	RefSeq	CDS	792138	793118	.	+	0	ID=cds679;Name=YP_002345795.1;Parent=gene705;Dbxref=UniProtKB%2FTrEMBL:Q0WIU3,Genbank:YP_002345795.1,GeneID:1173575;gbkey=CDS;product=hypothetical protein;protein_id=YP_002345795.1;transl_table=11
NC_003143.1	RefSeq	gene	793282	793728	.	-	.	ID=gene706;Name=YPO0735;Dbxref=GeneID:1173576;gbkey=Gene;locus_tag=YPO0735
NC_003143.1	RefSeq	CDS	793282	793728	.	-	0	ID=cds680;Name=YP_002345796.2;Parent=gene706;Dbxref=UniProtKB%2FTrEMBL:Q0WIU2,Genbank:YP_002345796.2,GeneID:1173576;gbkey=CDS;product=hypothetical protein;protein_id=YP_002345796.2;transl_table=11
NC_003143.1	RefSeq	gene	793709	794755	.	-	.	ID=gene707;Name=YPO0736;Dbxref=GeneID:1173577;gbkey=Gene;locus_tag=YPO0736
NC_003143.1	RefSeq	CDS	793709	794755	.	-	0	ID=cds681;Name=YP_002345797.1;Parent=gene707;Dbxref=InterPro:IPR001867,InterPro:IPR011991,UniProtKB%2FTrEMBL:Q7CGL3,Genbank:YP_002345797.1,GeneID:1173577;gbkey=CDS;product=regulatory protein;protein_id=YP_002345797.1;transl_table=11
NC_003143.1	RefSeq	region	794069	794134	.	-	.	ID=id506;Note=1 probable transmembrane helix predicted;Dbxref=GeneID:1173577;gbkey=misc_feature
NC_003143.1	RefSeq	gene	795381	796595	.	+	.	ID=gene708;Name=flaA1;Dbxref=GeneID:1173578;gbkey=Gene;gene=flaA1;locus_tag=YPO0737
NC_003143.1	RefSeq	CDS	795381	796595	.	+	0	ID=cds682;Name=YP_002345798.1;Parent=gene708;Dbxref=InterPro:IPR001029,InterPro:IPR001492,UniProtKB%2FTrEMBL:Q0WIU0,Genbank:YP_002345798.1,GeneID:1173578;gbkey=CDS;gene=flaA1;product=flagellin;protein_id=YP_002345798.1;transl_table=11
NC_003143.1	RefSeq	gene	797110	798309	.	+	.	ID=gene709;Name=flaA2;Dbxref=GeneID:1173579;gbkey=Gene;gene=flaA2;locus_tag=YPO0738
NC_003143.1	RefSeq	CDS	797110	798309	.	+	0	ID=cds683;Name=YP_002345799.1;Parent=gene709;Dbxref=InterPro:IPR001029,InterPro:IPR001492,UniProtKB%2FTrEMBL:Q0WIT9,Genbank:YP_002345799.1,GeneID:1173579;gbkey=CDS;gene=flaA2;product=flagellin;protein_id=YP_002345799.1;transl_table=11
NC_003143.1	RefSeq	gene	798592	799797	.	+	.	ID=gene710;Name=flaA3;Dbxref=GeneID:1173580;gbkey=Gene;gene=flaA3;locus_tag=YPO0739
NC_003143.1	RefSeq	CDS	798592	799797	.	+	0	ID=cds684;Name=YP_002345800.1;Parent=gene710;Dbxref=InterPro:IPR001029,InterPro:IPR001492,UniProtKB%2FTrEMBL:Q0WIT8,Genbank:YP_002345800.1,GeneID:1173580;gbkey=CDS;gene=flaA3;product=flagellin;protein_id=YP_002345800.1;transl_table=11
NC_003143.1	RefSeq	region	799126	799149	.	+	.	ID=id507;Note=PS00017 ATP%2FGTP-binding site motif A %28P-loop%29.;Dbxref=GeneID:1173580;gbkey=misc_feature;gene=flaA3
NC_003143.1	RefSeq	gene	800017	801294	.	+	.	ID=gene711;Name=fliD;Dbxref=GeneID:1173581;gbkey=Gene;gene=fliD;locus_tag=YPO0740
NC_003143.1	RefSeq	CDS	800017	801294	.	+	0	ID=cds685;Name=YP_002345801.1;Parent=gene711;Dbxref=InterPro:IPR003481,InterPro:IPR010809,InterPro:IPR010810,UniProtKB%2FTrEMBL:Q74RI4,Genbank:YP_002345801.1,GeneID:1173581;gbkey=CDS;gene=fliD;product=flagellar hook-associated protein;protein_id=YP_002345801.1;transl_table=11
NC_003143.1	RefSeq	gene	801304	801684	.	+	.	ID=gene712;Name=fliS;Dbxref=GeneID:1173582;gbkey=Gene;gene=fliS;gene_synonym=lafC;locus_tag=YPO0741
NC_003143.1	RefSeq	CDS	801304	801684	.	+	0	ID=cds686;Name=YP_002345802.1;Parent=gene712;Dbxref=InterPro:IPR003713,UniProtKB%2FTrEMBL:Q74RI3,Genbank:YP_002345802.1,GeneID:1173582;gbkey=CDS;gene=fliS;product=flagellar protein;protein_id=YP_002345802.1;transl_table=11
NC_003143.1	RefSeq	gene	801686	802012	.	+	.	ID=gene713;Name=YPO0742;Dbxref=GeneID:1173583;gbkey=Gene;locus_tag=YPO0742
NC_003143.1	RefSeq	CDS	801686	802012	.	+	0	ID=cds687;Name=YP_002345803.1;Parent=gene713;Dbxref=UniProtKB%2FTrEMBL:Q74RI2,Genbank:YP_002345803.1,GeneID:1173583;gbkey=CDS;product=hypothetical protein;protein_id=YP_002345803.1;transl_table=11
NC_003143.1	RefSeq	gene	802014	803195	.	+	.	ID=gene714;Name=YPO0743;Dbxref=GeneID:1173584;gbkey=Gene;locus_tag=YPO0743
NC_003143.1	RefSeq	CDS	802014	803195	.	+	0	ID=cds688;Name=YP_002345804.1;Parent=gene714;Dbxref=InterPro:IPR001451,InterPro:IPR001635,InterPro:IPR004829,InterPro:IPR011004,UniProtKB%2FTrEMBL:Q0WIT4,Genbank:YP_002345804.1,GeneID:1173584;gbkey=CDS;product=flagellar hook-length control protein;protein_id=YP_002345804.1;transl_table=11
NC_003143.1	RefSeq	region	802527	802613	.	+	.	ID=id508;Note=PS00101 Hexapeptide-repeat containing-transferases signature.;Dbxref=GeneID:1173584;gbkey=misc_feature
NC_003143.1	RefSeq	region	802617	802703	.	+	.	ID=id509;Note=PS00101 Hexapeptide-repeat containing-transferases signature.;Dbxref=GeneID:1173584;gbkey=misc_feature
NC_003143.1	RefSeq	gene	803234	803704	.	+	.	ID=gene715;Name=YPO0744;Dbxref=GeneID:1173585;gbkey=Gene;locus_tag=YPO0744
NC_003143.1	RefSeq	CDS	803234	803704	.	+	0	ID=cds689;Name=YP_002345805.1;Parent=gene715;Dbxref=UniProtKB%2FTrEMBL:Q0WIT3,Genbank:YP_002345805.1,GeneID:1173585;gbkey=CDS;product=flagellar biogenesis protein;protein_id=YP_002345805.1;transl_table=11
NC_003143.1	RefSeq	region	803267	803320	.	+	.	ID=id510;Note=1 probable transmembrane helix predicted;Dbxref=GeneID:1173585;gbkey=misc_feature
NC_003143.1	RefSeq	gene	803710	804405	.	+	.	ID=gene716;Name=fliA;Dbxref=GeneID:1173586;gbkey=Gene;gene=fliA;gene_synonym=lafS;locus_tag=YPO0745
NC_003143.1	RefSeq	CDS	803710	804405	.	+	0	ID=cds690;Name=YP_002345806.1;Parent=gene716;Note=sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released%3B this sigma factor directs late flagellar biosynthesis genes;Dbxref=InterPro:IPR000943,InterPro:IPR007624,InterPro:IPR007627,InterPro:IPR007630,InterPro:IPR012845,InterPro:IPR013324,InterPro:IPR013325,UniProtKB%2FTrEMBL:Q74RH9,Genbank:YP_002345806.1,GeneID:1173586;gbkey=CDS;gene=fliA;product=flagellar biosynthesis sigma factor;protein_id=YP_002345806.1;transl_table=11
NC_003143.1	RefSeq	region	804307	804372	.	+	.	ID=id511;Note=Predicted helix-turn-helix motif with score 1416 %28%2B4.01 SD%29 at aa 200-221%2C sequence LSMKEIAQVLDLTEARICQLNK;Dbxref=GeneID:1173586;gbkey=misc_feature;gene=fliA
NC_003143.1	RefSeq	gene	804421	805287	.	+	.	ID=gene717;Name=motA;Dbxref=GeneID:1173587;gbkey=Gene;gene=motA;locus_tag=YPO0746
NC_003143.1	RefSeq	CDS	804421	805287	.	+	0	ID=cds691;Name=YP_002345807.1;Parent=gene717;Note=With MotB forms the ion channels that couple flagellar rotation to proton%2Fsodium motive force across the membrane and forms the stator elements of the rotary flagellar machine;Dbxref=InterPro:IPR000540,InterPro:IPR002898,UniProtKB%2FTrEMBL:Q0WIT1,Genbank:YP_002345807.1,GeneID:1173587;gbkey=CDS;gene=motA;product=flagellar motor protein MotA;protein_id=YP_002345807.1;transl_table=11
NC_003143.1	RefSeq	region	805033	805086	.	+	.	ID=id512;Note=PS01307 Flagellar motor protein motA family signature.;Dbxref=GeneID:1173587;gbkey=misc_feature;gene=motA
NC_003143.1	RefSeq	gene	805287	806198	.	+	.	ID=gene718;Name=motB;Dbxref=GeneID:1173588;gbkey=Gene;gene=motB;locus_tag=YPO0747
NC_003143.1	RefSeq	CDS	805287	806198	.	+	0	ID=cds692;Name=YP_002345808.1;Parent=gene718;Dbxref=InterPro:IPR006665,UniProtKB%2FTrEMBL:Q74RH7,Genbank:YP_002345808.1,GeneID:1173588;gbkey=CDS;gene=motB;product=hypothetical protein;protein_id=YP_002345808.1;transl_table=11
NC_003143.1	RefSeq	region	805365	805433	.	+	.	ID=id513;Note=1 probable transmembrane helix predicted;Dbxref=GeneID:1173588;gbkey=misc_feature;gene=motB
NC_003143.1	RefSeq	gene	806658	807254	.	+	.	ID=gene719;Name=YPO0749;Dbxref=GeneID:1173590;gbkey=Gene;locus_tag=YPO0749
NC_003143.1	RefSeq	CDS	806658	807254	.	+	0	ID=cds693;Name=YP_002345810.1;Parent=gene719;Dbxref=UniProtKB%2FTrEMBL:Q74RH5,Genbank:YP_002345810.1,GeneID:1173590;gbkey=CDS;product=hypothetical protein;protein_id=YP_002345810.1;transl_table=11
NC_003143.1	RefSeq	gene	807251	807706	.	+	.	ID=gene720;Name=YPO0750;Dbxref=GeneID:1173591;gbkey=Gene;locus_tag=YPO0750
NC_003143.1	RefSeq	CDS	807251	807706	.	+	0	ID=cds694;Name=YP_002345811.1;Parent=gene720;Dbxref=UniProtKB%2FTrEMBL:Q74RH4,Genbank:YP_002345811.1,GeneID:1173591;gbkey=CDS;product=hypothetical protein;protein_id=YP_002345811.1;transl_table=11
NC_003143.1	RefSeq	gene	807690	808061	.	+	.	ID=gene721;Name=YPO0751;Dbxref=GeneID:1173592;gbkey=Gene;locus_tag=YPO0751
NC_003143.1	RefSeq	CDS	807690	808061	.	+	0	ID=cds695;Name=YP_002345812.2;Parent=gene721;Dbxref=UniProtKB%2FTrEMBL:Q0WIS6,Genbank:YP_002345812.2,GeneID:1173592;gbkey=CDS;product=hypothetical protein;protein_id=YP_002345812.2;transl_table=11
NC_003143.1	RefSeq	gene	808224	808689	.	-	.	ID=gene722;Name=pcp;Dbxref=GeneID:1173593;gbkey=Gene;gene=pcp;gene_synonym=pcpY,slyB;locus_tag=YPO0752;pseudo=true
NC_003143.1	RefSeq	region	808636	808668	.	-	.	ID=id514;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site.;Dbxref=GeneID:1173593;gbkey=misc_feature;gene=pcp
NC_003143.1	RefSeq	gene	808939	809241	.	-	.	ID=gene723;Name=YPO0754;Dbxref=GeneID:1173594;gbkey=Gene;locus_tag=YPO0754
NC_003143.1	RefSeq	CDS	808939	809241	.	-	0	ID=cds696;Name=YP_002345813.1;Parent=gene723;Dbxref=UniProtKB%2FTrEMBL:Q0WIS5,Genbank:YP_002345813.1,GeneID:1173594;gbkey=CDS;product=hypothetical protein;protein_id=YP_002345813.1;transl_table=11
NC_003143.1	RefSeq	repeat_region	809409	809576	.	+	.	ID=id515;Note=Multiple repeat region containing 12xCCTTTA and 16xCTTTTA repeats.;gbkey=repeat_region
NC_003143.1	RefSeq	region	809776	811239	.	+	.	ID=id516;Note=IS1397-like insertion element: IS1661;gbkey=misc_feature
NC_003143.1	RefSeq	repeat_region	809776	809809	.	+	.	ID=id517;Note=Inverted repeat for IS1661 insertion element;gbkey=repeat_region
NC_003143.1	RefSeq	gene	809842	810357	.	+	.	ID=gene724;Name=YPO0755;Dbxref=GeneID:1173595;gbkey=Gene;locus_tag=YPO0755
NC_003143.1	RefSeq	CDS	809842	810357	.	+	0	ID=cds697;Name=YP_002345814.1;Parent=gene724;Dbxref=InterPro:IPR002514,InterPro:IPR009057,UniProtKB%2FTrEMBL:Q74RD6,Genbank:YP_002345814.1,GeneID:1173595;gbkey=CDS;product=insertion element DNA-binding protein;protein_id=YP_002345814.1;transl_table=11
NC_003143.1	RefSeq	region	809899	809964	.	+	.	ID=id518;Note=Predicted helix-turn-helix motif with score 1691 %28%2B4.95 SD%29 at aa 20-41%2C sequence ATLRETARQFSVGKSPLTRWIR;Dbxref=GeneID:1173595;gbkey=misc_feature
NC_003143.1	RefSeq	gene	810411	811196	.	+	.	ID=gene725;Name=YPO0756;Dbxref=GeneID:1173596;gbkey=Gene;locus_tag=YPO0756
NC_003143.1	RefSeq	CDS	810411	811196	.	+	0	ID=cds698;Name=YP_002345815.1;Parent=gene725;Dbxref=InterPro:IPR001584,InterPro:IPR012337,UniProtKB%2FTrEMBL:Q7CKI6,Genbank:YP_002345815.1,GeneID:1173596;gbkey=CDS;product=transposase for insertion sequence IS1661;protein_id=YP_002345815.1;transl_table=11
NC_003143.1	RefSeq	gene	811086	812249	.	-	.	ID=gene726;Name=YPO0757;Dbxref=GeneID:1173597;gbkey=Gene;locus_tag=YPO0757
NC_003143.1	RefSeq	CDS	811086	812249	.	-	0	ID=cds699;Name=YP_008479683.1;Parent=gene726;Dbxref=Genbank:YP_008479683.1,GeneID:1173597;gbkey=CDS;product=hypothetical protein;protein_id=YP_008479683.1;transl_table=11
NC_003143.1	RefSeq	repeat_region	811206	811239	.	-	.	ID=id519;Note=Inverted repeat for IS1661 insertion element;Dbxref=GeneID:1173597;gbkey=repeat_region
NC_003143.1	RefSeq	region	811734	811763	.	-	.	ID=id520;Note=PS00659 Glycosyl hydrolases family 5 signature.;Dbxref=GeneID:1173597;gbkey=misc_feature
NC_003143.1	RefSeq	gene	812567	813562	.	+	.	ID=gene727;Name=YPO0758;Dbxref=GeneID:1173598;gbkey=Gene;locus_tag=YPO0758
NC_003143.1	RefSeq	CDS	812567	813562	.	+	0	ID=cds700;Name=YP_002345816.1;Parent=gene727;Dbxref=InterPro:IPR000843,InterPro:IPR001761,InterPro:IPR010982,UniProtKB%2FTrEMBL:Q0WIS2,Genbank:YP_002345816.1,GeneID:1173598;gbkey=CDS;product=LacI family regulatory protein;protein_id=YP_002345816.1;transl_table=11
NC_003143.1	RefSeq	gene	813844	815214	.	+	.	ID=gene728;Name=YPO0759;Dbxref=GeneID:1173599;gbkey=Gene;locus_tag=YPO0759
NC_003143.1	RefSeq	CDS	813844	815214	.	+	0	ID=cds701;Name=YP_002345817.1;Parent=gene728;Dbxref=InterPro:IPR001898,UniProtKB%2FTrEMBL:Q0WIS1,Genbank:YP_002345817.1,GeneID:1173599;gbkey=CDS;product=sodium:sulfate symporter family protein;protein_id=YP_002345817.1;transl_table=11
NC_003143.1	RefSeq	region	815056	815106	.	+	.	ID=id521;Note=PS01271 Sodium:sulfate symporter family signature.;Dbxref=GeneID:1173599;gbkey=misc_feature
NC_003143.1	RefSeq	gene	815394	815807	.	-	.	ID=gene729;Name=YPO0760;Dbxref=GeneID:1173600;gbkey=Gene;locus_tag=YPO0760
NC_003143.1	RefSeq	CDS	815394	815807	.	-	0	ID=cds702;Name=YP_002345818.1;Parent=gene729;Dbxref=UniProtKB%2FTrEMBL:Q7CGL6,Genbank:YP_002345818.1,GeneID:1173600;gbkey=CDS;product=hypothetical protein;protein_id=YP_002345818.1;transl_table=11
NC_003143.1	RefSeq	gene	816351	816593	.	-	.	ID=gene730;Name=YPO0761;Dbxref=GeneID:1173601;gbkey=Gene;locus_tag=YPO0761
NC_003143.1	RefSeq	CDS	816351	816593	.	-	0	ID=cds703;Name=YP_002345819.1;Parent=gene730;Note=no significant database hits;Dbxref=UniProtKB%2FTrEMBL:Q7CGL7,Genbank:YP_002345819.1,GeneID:1173601;gbkey=CDS;product=hypothetical protein;protein_id=YP_002345819.1;transl_table=11
NC_003143.1	RefSeq	gene	816868	821184	.	-	.	ID=gene731;Name=YPO0762;Dbxref=GeneID:1173602;gbkey=Gene;locus_tag=YPO0762
NC_003143.1	RefSeq	CDS	816868	821184	.	-	0	ID=cds704;Name=YP_002345820.1;Parent=gene731;Dbxref=InterPro:IPR000425,InterPro:IPR001826,InterPro:IPR006530,UniProtKB%2FTrEMBL:Q74QM5,Genbank:YP_002345820.1,GeneID:1173602;gbkey=CDS;product=hypothetical protein;protein_id=YP_002345820.1;transl_table=11
NC_003143.1	RefSeq	region	818431	818457	.	-	.	ID=id522;Note=PS00221 MIP family signature.;Dbxref=GeneID:1173602;gbkey=misc_feature
NC_003143.1	RefSeq	gene	821198	822517	.	-	.	ID=gene732;Name=YPO0763;Dbxref=GeneID:1173603;gbkey=Gene;locus_tag=YPO0763
NC_003143.1	RefSeq	CDS	821198	822517	.	-	0	ID=cds705;Name=YP_002345821.1;Parent=gene732;Dbxref=InterPro:IPR011990,UniProtKB%2FTrEMBL:Q0WIR7,Genbank:YP_002345821.1,GeneID:1173603;gbkey=CDS;product=hypothetical protein;protein_id=YP_002345821.1;transl_table=11
NC_003143.1	RefSeq	gene	822543	824768	.	-	.	ID=gene733;Name=YPO0764;Dbxref=GeneID:1173604;gbkey=Gene;locus_tag=YPO0764
NC_003143.1	RefSeq	CDS	822543	824768	.	-	0	ID=cds706;Name=YP_002345822.1;Parent=gene733;Dbxref=InterPro:IPR006533,InterPro:IPR010609,UniProtKB%2FTrEMBL:Q7CGL8,Genbank:YP_002345822.1,GeneID:1173604;gbkey=CDS;product=hypothetical protein;protein_id=YP_002345822.1;transl_table=11
NC_003143.1	RefSeq	gene	825357	829117	.	-	.	ID=gene734;Name=YPO0765;Dbxref=GeneID:1173605;gbkey=Gene;locus_tag=YPO0765;pseudo=true
NC_003143.1	RefSeq	gene	830118	831461	.	-	.	ID=gene735;Name=gntP;Dbxref=GeneID:1173606;gbkey=Gene;gene=gntP;locus_tag=YPO0767
NC_003143.1	RefSeq	CDS	830118	831461	.	-	0	ID=cds707;Name=YP_002345823.1;Parent=gene735;Dbxref=InterPro:IPR003474,InterPro:IPR006162,UniProtKB%2FTrEMBL:Q7CGL9,Genbank:YP_002345823.1,GeneID:1173606;gbkey=CDS;gene=gntP;product=fructuronate transporter;protein_id=YP_002345823.1;transl_table=11
NC_003143.1	RefSeq	region	831351	831398	.	-	.	ID=id523;Note=PS00012 Phosphopantetheine attachment site.;Dbxref=GeneID:1173606;gbkey=misc_feature;gene=gntP
NC_003143.1	RefSeq	gene	833001	833399	.	+	.	ID=gene736;Name=YPO0768;Dbxref=GeneID:1173607;gbkey=Gene;locus_tag=YPO0768
NC_003143.1	RefSeq	CDS	833001	833399	.	+	0	ID=cds708;Name=YP_002345824.1;Parent=gene736;Note=no significant database hits;Dbxref=UniProtKB%2FTrEMBL:Q7CGM0,Genbank:YP_002345824.1,GeneID:1173607;gbkey=CDS;product=hypothetical protein;protein_id=YP_002345824.1;transl_table=11
NC_003143.1	RefSeq	gene	833835	834710	.	+	.	ID=gene737;Name=YPO0769;Dbxref=GeneID:1173608;gbkey=Gene;locus_tag=YPO0769
NC_003143.1	RefSeq	CDS	833835	834710	.	+	0	ID=cds709;Name=YP_002345825.1;Parent=gene737;Dbxref=UniProtKB%2FTrEMBL:Q7CGM1,Genbank:YP_002345825.1,GeneID:1173608;gbkey=CDS;product=hypothetical protein;protein_id=YP_002345825.1;transl_table=11
NC_003143.1	RefSeq	region	835030	856930	.	-	.	ID=id524;Note=Yersinia pestis High Pathogenicity Island %28HPI%29-like region. HPI-2.;gbkey=misc_feature
NC_003143.1	RefSeq	gene	835033	836790	.	-	.	ID=gene738;Name=YPO0770;Dbxref=GeneID:1173609;gbkey=Gene;locus_tag=YPO0770
NC_003143.1	RefSeq	CDS	835033	836790	.	-	0	ID=cds710;Name=YP_002345826.1;Parent=gene738;Dbxref=InterPro:IPR001140,InterPro:IPR003439,InterPro:IPR003593,InterPro:IPR011527,UniProtKB%2FTrEMBL:Q0WIR2,Genbank:YP_002345826.1,GeneID:1173609;gbkey=CDS;product=ABC transporter transmembrane protein;protein_id=YP_002345826.1;transl_table=11
NC_003143.1	RefSeq	region	835327	835371	.	-	.	ID=id525;Note=PS00211 ABC transporters family signature.;Dbxref=GeneID:1173609;gbkey=misc_feature
NC_003143.1	RefSeq	region	835672	835695	.	-	.	ID=id526;Note=PS00017 ATP%2FGTP-binding site motif A %28P-loop%29.;Dbxref=GeneID:1173609;gbkey=misc_feature
NC_003143.1	RefSeq	gene	836783	838555	.	-	.	ID=gene739;Name=YPO0771;Dbxref=GeneID:1173610;gbkey=Gene;locus_tag=YPO0771
NC_003143.1	RefSeq	CDS	836783	838555	.	-	0	ID=cds711;Name=YP_002345827.1;Parent=gene739;Dbxref=InterPro:IPR001140,InterPro:IPR003439,InterPro:IPR003593,InterPro:IPR011527,UniProtKB%2FTrEMBL:Q7CGM2,Genbank:YP_002345827.1,GeneID:1173610;gbkey=CDS;product=ABC transporter transmembrane protein;protein_id=YP_002345827.1;transl_table=11
NC_003143.1	RefSeq	region	837092	837136	.	-	.	ID=id527;Note=PS00211 ABC transporters family signature.;Dbxref=GeneID:1173610;gbkey=misc_feature
NC_003143.1	RefSeq	region	837419	837442	.	-	.	ID=id528;Note=PS00017 ATP%2FGTP-binding site motif A %28P-loop%29.;Dbxref=GeneID:1173610;gbkey=misc_feature
NC_003143.1	RefSeq	gene	838555	839859	.	-	.	ID=gene740;Name=YPO0772;Dbxref=GeneID:1173611;gbkey=Gene;locus_tag=YPO0772
NC_003143.1	RefSeq	CDS	838555	839859	.	-	0	ID=cds712;Name=YP_002345828.1;Parent=gene740;Dbxref=InterPro:IPR011701,UniProtKB%2FTrEMBL:Q0WIR0,Genbank:YP_002345828.1,GeneID:1173611;gbkey=CDS;product=hypothetical protein;protein_id=YP_002345828.1;transl_table=11
NC_003143.1	RefSeq	gene	839849	840613	.	-	.	ID=gene741;Name=YPO0773;Dbxref=GeneID:1173612;gbkey=Gene;locus_tag=YPO0773
NC_003143.1	RefSeq	CDS	839849	840613	.	-	0	ID=cds713;Name=YP_002345829.1;Parent=gene741;Dbxref=InterPro:IPR001031,InterPro:IPR012223,UniProtKB%2FTrEMBL:Q0WIQ9,Genbank:YP_002345829.1,GeneID:1173612;gbkey=CDS;product=thioesterase;protein_id=YP_002345829.1;transl_table=11
NC_003143.1	RefSeq	gene	840606	841733	.	-	.	ID=gene742;Name=YPO0774;Dbxref=GeneID:1173613;gbkey=Gene;locus_tag=YPO0774
NC_003143.1	RefSeq	CDS	840606	841733	.	-	0	ID=cds714;Name=YP_002345830.1;Parent=gene742;Dbxref=InterPro:IPR000683,InterPro:IPR010091,UniProtKB%2FTrEMBL:Q7CGM3,Genbank:YP_002345830.1,GeneID:1173613;gbkey=CDS;product=hypothetical protein;protein_id=YP_002345830.1;transl_table=11
NC_003143.1	RefSeq	gene	841730	842806	.	-	.	ID=gene743;Name=YPO0775;Dbxref=GeneID:1173614;gbkey=Gene;locus_tag=YPO0775
NC_003143.1	RefSeq	CDS	841730	842806	.	-	0	ID=cds715;Name=YP_002345831.1;Parent=gene743;Dbxref=InterPro:IPR005097,UniProtKB%2FTrEMBL:Q0WIQ7,Genbank:YP_002345831.1,GeneID:1173614;gbkey=CDS;product=hypothetical protein;protein_id=YP_002345831.1;transl_table=11
NC_003143.1	RefSeq	gene	842803	848622	.	-	.	ID=gene744;Name=YPO0776;Dbxref=GeneID:1173615;gbkey=Gene;locus_tag=YPO0776
NC_003143.1	RefSeq	CDS	842803	848622	.	-	0	ID=cds716;Name=YP_002345832.1;Parent=gene744;Dbxref=InterPro:IPR000873,InterPro:IPR001031,InterPro:IPR001242,InterPro:IPR006162,InterPro:IPR006163,InterPro:IPR009081,InterPro:IPR010071,InterPro:IPR013217,InterPro:IPR013624,UniProtKB%2FTrEMBL:Q0WIQ6,Genbank:YP_002345832.1,GeneID:1173615;gbkey=CDS;product=siderophore biosysnthesis protein;protein_id=YP_002345832.1;transl_table=11
NC_003143.1	RefSeq	region	843877	843924	.	-	.	ID=id529;Note=PS00012 Phosphopantetheine attachment site.;Dbxref=GeneID:1173615;gbkey=misc_feature
NC_003143.1	RefSeq	region	846463	846498	.	-	.	ID=id530;Note=PS00455  AMP-binding domain signature.;Dbxref=GeneID:1173615;gbkey=misc_feature
NC_003143.1	RefSeq	gene	848635	850287	.	-	.	ID=gene745;Name=YPO0777;Dbxref=GeneID:1173616;gbkey=Gene;locus_tag=YPO0777
NC_003143.1	RefSeq	CDS	848635	850287	.	-	0	ID=cds717;Name=YP_002345833.1;Parent=gene745;Dbxref=InterPro:IPR000873,InterPro:IPR006163,InterPro:IPR009081,InterPro:IPR010071,UniProtKB%2FTrEMBL:Q74QN9,Genbank:YP_002345833.1,GeneID:1173616;gbkey=CDS;product=siderophore biosysnthesis protein;protein_id=YP_002345833.1;transl_table=11
NC_003143.1	RefSeq	region	849970	850005	.	-	.	ID=id531;Note=PS00455  AMP-binding domain signature.;Dbxref=GeneID:1173616;gbkey=misc_feature
NC_003143.1	RefSeq	gene	850331	856936	.	-	.	ID=gene746;Name=YPO0778;Dbxref=GeneID:1173617;gbkey=Gene;locus_tag=YPO0778
NC_003143.1	RefSeq	CDS	850331	856936	.	-	0	ID=cds718;Name=YP_002345834.1;Parent=gene746;Dbxref=InterPro:IPR000873,InterPro:IPR001242,InterPro:IPR006162,InterPro:IPR006163,InterPro:IPR009081,InterPro:IPR010071,InterPro:IPR013624,UniProtKB%2FTrEMBL:Q0WIQ4,Genbank:YP_002345834.1,GeneID:1173617;gbkey=CDS;product=siderophore biosysnthesis protein;protein_id=YP_002345834.1;transl_table=11
NC_003143.1	RefSeq	region	851978	852025	.	-	.	ID=id532;Note=PS00012 Phosphopantetheine attachment site.;Dbxref=GeneID:1173617;gbkey=misc_feature
NC_003143.1	RefSeq	region	854249	854284	.	-	.	ID=id533;Note=PS00455  AMP-binding domain signature.;Dbxref=GeneID:1173617;gbkey=misc_feature
NC_003143.1	RefSeq	repeat_region	856931	858884	.	-	.	ID=id534;Note=insertion sequence:IS100;gbkey=repeat_region
NC_003143.1	RefSeq	repeat_region	856931	856958	.	+	.	ID=id535;Note=IS100 inverted repeat;gbkey=repeat_region
NC_003143.1	RefSeq	gene	856997	857779	.	-	.	ID=gene747;Name=YPO0779;Note=ypmt1.57c;Dbxref=GeneID:1173618;gbkey=Gene;locus_tag=YPO0779
NC_003143.1	RefSeq	CDS	856997	857779	.	-	0	ID=cds719;Name=YP_002345835.1;Parent=gene747;Dbxref=InterPro:IPR001270,InterPro:IPR002611,InterPro:IPR003593,UniProtKB%2FTrEMBL:Q7ARK4,Genbank:YP_002345835.1,GeneID:1173618;gbkey=CDS;product=transposase%2FIS protein;protein_id=YP_002345835.1;transl_table=11
NC_003143.1	RefSeq	region	857429	857452	.	-	.	ID=id536;Note=PS00017 ATP%2FGTP-binding site motif A %28P-loop%29.;Dbxref=GeneID:1173618;gbkey=misc_feature
NC_003143.1	RefSeq	gene	857776	858798	.	-	.	ID=gene748;Name=y1093;Dbxref=GeneID:1173619;gbkey=Gene;gene=y1093;gene_synonym=ypmt1;locus_tag=YPO0780
NC_003143.1	RefSeq	CDS	857776	858798	.	-	0	ID=cds720;Name=YP_002345836.1;Parent=gene748;Dbxref=InterPro:IPR001584,InterPro:IPR006120,InterPro:IPR009057,InterPro:IPR012287,InterPro:IPR012337,UniProtKB%2FTrEMBL:Q7ARN5,Genbank:YP_002345836.1,GeneID:1173619;gbkey=CDS;gene=y1093;product=transposase for insertion sequence IS100;protein_id=YP_002345836.1;transl_table=11
NC_003143.1	RefSeq	region	858682	858747	.	-	.	ID=id537;Note=Predicted helix-turn-helix motif with score 2147 %28%2B6.50 SD%29 at aa 18-39%2C sequence MSSRAIARELGISRNTVKRYLQ;Dbxref=GeneID:1173619;gbkey=misc_feature;gene=y1093
NC_003143.1	RefSeq	repeat_region	858857	858884	.	-	.	ID=id538;Note=IS100 inverted repeat;gbkey=repeat_region
NC_003143.1	RefSeq	gene	858883	859233	.	-	.	ID=gene749;Name=YPO0781;Dbxref=GeneID:1173620;gbkey=Gene;locus_tag=YPO0781;pseudo=true
NC_003143.1	RefSeq	region	858883	859233	.	-	.	ID=id539;Note=Similar to N-terminal regions of Escherichia coli prepilin peptidase dependent protein A PpdA SW:PPDA_ECOLI %28P33554%29 %28156 aa%29 fasta scores: E%28%29: 0.0018%2C 26.7%25 id in 101 aa%2C and Pseudomonas aeruginosa fimbrial protein precursor FimU TR:Q59652 %28EMBL:L48934%29 %28168 aa%29 fasta scores: E%28%29: 0.27%2C 29.1%25 id in 86 aa. This CDS is disrupted by the insertion of IS100 element. The insertion occurred near the C-terminus. It is not clear whether this insertion affects the function of the protein.;Dbxref=GeneID:1173620;gbkey=misc_feature;pseudo=true
NC_003143.1	RefSeq	gene	859517	860311	.	-	.	ID=gene750;Name=thyA;Dbxref=GeneID:1173622;gbkey=Gene;gene=thyA;locus_tag=YPO0783
NC_003143.1	RefSeq	CDS	859517	860311	.	-	0	ID=cds721;Name=YP_002345838.1;Parent=gene750;Note=ThyA%3B catalyzes formation of dTMP and 7%2C8-dihydrofolate from 5%2C10-methylenetetrahydrofolate and dUMP%3B involved in deoxyribonucleotide biosynthesis%3B there are 2 copies in some Bacilli%2C one of which appears to be phage-derived;Dbxref=InterPro:IPR000398,UniProtKB%2FTrEMBL:Q0WIQ0,Genbank:YP_002345838.1,GeneID:1173622;gbkey=CDS;gene=thyA;product=thymidylate synthase;protein_id=YP_002345838.1;transl_table=11
NC_003143.1	RefSeq	region	859850	859936	.	-	.	ID=id540;Note=PS00091 Thymidylate synthase active site.;Dbxref=GeneID:1173622;gbkey=misc_feature;gene=thyA
NC_003143.1	RefSeq	gene	860318	861190	.	-	.	ID=gene751;Name=lgt;Dbxref=GeneID:1173623;gbkey=Gene;gene=lgt;gene_synonym=umpA;locus_tag=YPO0784
NC_003143.1	RefSeq	CDS	860318	861190	.	-	0	ID=cds722;Name=YP_002345839.1;Parent=gene751;Note=transfers the N-acyl diglyceride moiety to the prospective N-terminal cysteine in prolipoprotein;Dbxref=InterPro:IPR001640,InterPro:IPR008927,UniProtKB%2FTrEMBL:Q0WIP9,Genbank:YP_002345839.1,GeneID:1173623;gbkey=CDS;gene=lgt;product=prolipoprotein diacylglyceryl transferase;protein_id=YP_002345839.1;transl_table=11
NC_003143.1	RefSeq	region	860729	860767	.	-	.	ID=id541;Note=PS01311 Prolipoprotein diacylglyceryl transferase signature.;Dbxref=GeneID:1173623;gbkey=misc_feature;gene=lgt
NC_003143.1	RefSeq	gene	861441	863687	.	-	.	ID=gene752;Name=ptsP;Dbxref=GeneID:1173624;gbkey=Gene;gene=ptsP;locus_tag=YPO0785
NC_003143.1	RefSeq	CDS	861441	863687	.	-	0	ID=cds723;Name=YP_002345840.1;Parent=gene752;Note=member of a second PTS chain involved in nitrogen metabolism%3B PtsP phosphorylates NPr;Dbxref=InterPro:IPR000121,InterPro:IPR003018,InterPro:IPR006318,InterPro:IPR008279,InterPro:IPR008731,UniProtKB%2FTrEMBL:Q7CGZ5,Genbank:YP_002345840.1,GeneID:1173624;gbkey=CDS;gene=ptsP;product=fused phosphoenolpyruvate-protein phosphotransferase PtsP%2FGAF domain-containing protein;protein_id=YP_002345840.1;transl_table=11
NC_003143.1	RefSeq	region	861795	861851	.	-	.	ID=id542;Note=PS00742 PEP-utilizing enzymes signature 2.;Dbxref=GeneID:1173624;gbkey=misc_feature;gene=ptsP
NC_003143.1	RefSeq	region	862602	862637	.	-	.	ID=id543;Note=PS00370 PEP-utilizing enzymes phosphorylation site signature.;Dbxref=GeneID:1173624;gbkey=misc_feature;gene=ptsP
NC_003143.1	RefSeq	region	863163	863228	.	-	.	ID=id544;Note=Predicted helix-turn-helix motif with score 987 %28%2B2.55 SD%29 at aa 154-175%2C sequence LSQSQLNAIFGQYRQTRIRALA;Dbxref=GeneID:1173624;gbkey=misc_feature;gene=ptsP
NC_003143.1	RefSeq	gene	863700	864227	.	-	.	ID=gene753;Name=YPO0786;Dbxref=GeneID:1173625;gbkey=Gene;locus_tag=YPO0786
NC_003143.1	RefSeq	CDS	863700	864227	.	-	0	ID=cds724;Name=YP_002345841.1;Parent=gene753;Note=hydrolyzes diadenosine polyphosphate;Dbxref=InterPro:IPR000086,UniProtKB%2FTrEMBL:Q0WIP7,Genbank:YP_002345841.1,GeneID:1173625;gbkey=CDS;product=dinucleoside polyphosphate hydrolase;protein_id=YP_002345841.1;transl_table=11
NC_003143.1	RefSeq	region	864057	864116	.	-	.	ID=id545;Note=PS00893 mutT domain signature.;Dbxref=GeneID:1173625;gbkey=misc_feature
NC_003143.1	RefSeq	gene	864925	865611	.	+	.	ID=gene754;Name=mutH;Dbxref=GeneID:1173628;gbkey=Gene;gene=mutH;gene_synonym=mutR,prv;locus_tag=YPO0789
NC_003143.1	RefSeq	CDS	864925	865611	.	+	0	ID=cds725;Name=YP_002345844.1;Parent=gene754;Note=MutH%3B Sequence-specific endonuclease that cleaves unmethylated GATC sequences during DNA repair;Dbxref=InterPro:IPR004230,UniProtKB%2FTrEMBL:Q0WIP4,Genbank:YP_002345844.1,GeneID:1173628;gbkey=CDS;gene=mutH;product=DNA mismatch repair protein;protein_id=YP_002345844.1;transl_table=11
NC_003143.1	RefSeq	gene	865946	866986	.	+	.	ID=gene755;Name=tas;Dbxref=GeneID:1173629;gbkey=Gene;gene=tas;locus_tag=YPO0790
NC_003143.1	RefSeq	CDS	865946	866986	.	+	0	ID=cds726;Name=YP_002345845.1;Parent=gene755;Note=complements the prephenate dehydrogenase dysfunction of an Escherichia coli tyrosine auxotroph strain%3B member of the aldo%2Fketo reductase 2 family%3B crystal structure of purified Escherichia coli protein shows bound NADPH;Dbxref=InterPro:IPR001395,UniProtKB%2FTrEMBL:Q7CGZ3,Genbank:YP_002345845.1,GeneID:1173629;gbkey=CDS;gene=tas;product=aldo%2Fketo reductase;protein_id=YP_002345845.1;transl_table=11
NC_003143.1	RefSeq	gene	867693	867926	.	+	.	ID=gene756;Name=YPO0790a;Dbxref=GeneID:16744741;gbkey=Gene;locus_tag=YPO0790a
NC_003143.1	RefSeq	CDS	867693	867926	.	+	0	ID=cds727;Name=YP_008479684.1;Parent=gene756;Dbxref=Genbank:YP_008479684.1,GeneID:16744741;gbkey=CDS;product=hypothetical protein;protein_id=YP_008479684.1;transl_table=11
NC_003143.1	RefSeq	gene	867955	869175	.	-	.	ID=gene757;Name=ygeD;Dbxref=GeneID:1173631;gbkey=Gene;gene=ygeD;locus_tag=YPO0792
NC_003143.1	RefSeq	CDS	867955	869175	.	-	0	ID=cds728;Name=YP_002345847.1;Parent=gene757;Dbxref=InterPro:IPR011701,UniProtKB%2FTrEMBL:Q7CGZ2,Genbank:YP_002345847.1,GeneID:1173631;gbkey=CDS;gene=ygeD;product=lysophospholipid transporter LplT;protein_id=YP_002345847.1;transl_table=11
NC_003143.1	RefSeq	gene	869172	871328	.	-	.	ID=gene758;Name=aas;Dbxref=GeneID:1173632;gbkey=Gene;gene=aas;locus_tag=YPO0793
NC_003143.1	RefSeq	CDS	869172	871328	.	-	0	ID=cds729;Name=YP_002345848.1;Parent=gene758;Note=Transfers fatty acids to the 1-position via an enzyme-bound acyl-ACP intermediate in the presence of ATP and magnesium. Its physiological function is to regenerate phosphatidylethanolamine from 2-acyl-glycero-3-phosphoethanolamine %282-acyl-GPE%29 formed by transacylation reactions or degradation by phospholipase A1;Dbxref=InterPro:IPR000873,InterPro:IPR002123,UniProtKB%2FTrEMBL:Q0WIP0,Genbank:YP_002345848.1,GeneID:1173632;gbkey=CDS;gene=aas;product=acyl-ACP synthetase;protein_id=YP_002345848.1;transl_table=11
NC_003143.1	RefSeq	region	869877	869906	.	-	.	ID=id546;Note=PS00215 Mitochondrial energy transfer proteins signature.;Dbxref=GeneID:1173632;gbkey=misc_feature;gene=aas
NC_003143.1	RefSeq	region	870186	870221	.	-	.	ID=id547;Note=PS00455  AMP-binding domain signature.;Dbxref=GeneID:1173632;gbkey=misc_feature;gene=aas
NC_003143.1	RefSeq	gene	871777	874038	.	-	.	ID=gene759;Name=bisC;Dbxref=GeneID:1173633;gbkey=Gene;gene=bisC;locus_tag=YPO0794
NC_003143.1	RefSeq	CDS	871777	874038	.	-	0	ID=cds730;Name=YP_002345849.1;Parent=gene759;Dbxref=InterPro:IPR006656,InterPro:IPR006657,InterPro:IPR009010,UniProtKB%2FTrEMBL:Q74RZ7,Genbank:YP_002345849.1,GeneID:1173633;gbkey=CDS;gene=bisC;product=biotin sulfoxide reductas2;protein_id=YP_002345849.1;transl_table=11
NC_003143.1	RefSeq	gene	874348	875370	.	+	.	ID=gene760;Name=galR;Dbxref=GeneID:1173634;gbkey=Gene;gene=galR;locus_tag=YPO0795
NC_003143.1	RefSeq	CDS	874348	875370	.	+	0	ID=cds731;Name=YP_002345850.1;Parent=gene760;Note=controls transcription of galETKM;Dbxref=InterPro:IPR000843,InterPro:IPR001761,InterPro:IPR010982,UniProtKB%2FTrEMBL:Q0WIN8,Genbank:YP_002345850.1,GeneID:1173634;gbkey=CDS;gene=galR;product=DNA-binding transcriptional regulator GalR;protein_id=YP_002345850.1;transl_table=11
NC_003143.1	RefSeq	region	874351	874416	.	+	.	ID=id548;Note=Predicted helix-turn-helix motif with score 2181 %28%2B6.62 SD%29 at aa 56-77%2C sequence ATIKDVAKLAGVSVATVSRVIN;Dbxref=GeneID:1173634;gbkey=misc_feature;gene=galR
NC_003143.1	RefSeq	region	874357	874413	.	+	.	ID=id549;Note=PS00356 Bacterial regulatory proteins%2C lacI family signature.;Dbxref=GeneID:1173634;gbkey=misc_feature;gene=galR
NC_003143.1	RefSeq	gene	875367	876629	.	-	.	ID=gene761;Name=lysA;Dbxref=GeneID:1173635;gbkey=Gene;gene=lysA;locus_tag=YPO0796
NC_003143.1	RefSeq	CDS	875367	876629	.	-	0	ID=cds732;Name=YP_002345851.1;Parent=gene761;Note=catalyzes the decarboxylation of diaminopimelate into lysine%3B pyridoxal phosphate%28PLP%29-binding;Dbxref=InterPro:IPR000183,InterPro:IPR001000,InterPro:IPR002986,InterPro:IPR009006,UniProtKB%2FTrEMBL:Q7CGZ1,Genbank:YP_002345851.1,GeneID:1173635;gbkey=CDS;gene=lysA;product=diaminopimelate decarboxylase;protein_id=YP_002345851.1;transl_table=11
NC_003143.1	RefSeq	region	875943	875984	.	-	.	ID=id550;Note=PS00879 Orn%2FDAP%2FArg decarboxylases family 2 signature 2.;Dbxref=GeneID:1173635;gbkey=misc_feature;gene=lysA
NC_003143.1	RefSeq	region	876279	876311	.	-	.	ID=id551;Note=PS00591 Glycosyl hydrolases family 10 active site.;Dbxref=GeneID:1173635;gbkey=misc_feature;gene=lysA
NC_003143.1	RefSeq	region	876423	876479	.	-	.	ID=id552;Note=PS00878 Orn%2FDAP%2FArg decarboxylases family 2 pyridoxal-P attachment site.;Dbxref=GeneID:1173635;gbkey=misc_feature;gene=lysA
NC_003143.1	RefSeq	gene	876844	877785	.	+	.	ID=gene762;Name=lysR;Dbxref=GeneID:1173636;gbkey=Gene;gene=lysR;locus_tag=YPO0797
NC_003143.1	RefSeq	CDS	876844	877785	.	+	0	ID=cds733;Name=YP_002345852.1;Parent=gene762;Note=activates the transcription of the lysA gene encoding diaminopimelate decarboxylase;Dbxref=InterPro:IPR000847,InterPro:IPR005119,InterPro:IPR011991,UniProtKB%2FTrEMBL:Q0WIN6,Genbank:YP_002345852.1,GeneID:1173636;gbkey=CDS;gene=lysR;product=LysR family transcriptional regulator;protein_id=YP_002345852.1;transl_table=11
NC_003143.1	RefSeq	region	876898	876963	.	+	.	ID=id553;Note=Predicted helix-turn-helix motif with score 1601 %28%2B4.64 SD%29 at aa 19-40%2C sequence GNLTEAALLLQTSQPTVSRELA;Dbxref=GeneID:1173636;gbkey=misc_feature;gene=lysR
NC_003143.1	RefSeq	region	876901	876993	.	+	.	ID=id554;Note=PS00044 Bacterial regulatory proteins%2C lysR family signature.;Dbxref=GeneID:1173636;gbkey=misc_feature;gene=lysR
NC_003143.1	RefSeq	gene	877782	878942	.	-	.	ID=gene763;Name=lysR;Dbxref=GeneID:1173637;gbkey=Gene;gene=lysR;locus_tag=YPO0798
NC_003143.1	RefSeq	CDS	877782	878942	.	-	0	ID=cds734;Name=YP_002345853.1;Parent=gene763;Dbxref=InterPro:IPR007114,InterPro:IPR011701,UniProtKB%2FTrEMBL:Q7CGZ0,Genbank:YP_002345853.1,GeneID:1173637;gbkey=CDS;product=sugar transport protein;protein_id=YP_002345853.1;transl_table=11
NC_003143.1	RefSeq	gene	879311	880219	.	-	.	ID=gene764;Name=YPO0799;Dbxref=GeneID:1173638;gbkey=Gene;locus_tag=YPO0799
NC_003143.1	RefSeq	CDS	879311	880219	.	-	0	ID=cds735;Name=YP_002345854.1;Parent=gene764;Dbxref=InterPro:IPR000847,InterPro:IPR005119,InterPro:IPR011991,UniProtKB%2FTrEMBL:Q7CGY9,Genbank:YP_002345854.1,GeneID:1173638;gbkey=CDS;product=LysR family transcriptional regulator;protein_id=YP_002345854.1;transl_table=11
NC_003143.1	RefSeq	gene	880326	881213	.	+	.	ID=gene765;Name=YPO0800;Dbxref=GeneID:1173639;gbkey=Gene;locus_tag=YPO0800
NC_003143.1	RefSeq	CDS	880326	881213	.	+	0	ID=cds736;Name=YP_002345855.1;Parent=gene765;Dbxref=InterPro:IPR001279,UniProtKB%2FTrEMBL:Q74S03,Genbank:YP_002345855.1,GeneID:1173639;gbkey=CDS;product=hypothetical protein;protein_id=YP_002345855.1;transl_table=11
NC_003143.1	RefSeq	gene	881326	881961	.	+	.	ID=gene766;Name=YPO0801;Dbxref=GeneID:1173640;gbkey=Gene;locus_tag=YPO0801
NC_003143.1	RefSeq	CDS	881326	881961	.	+	0	ID=cds737;Name=YP_002345856.1;Parent=gene766;Dbxref=InterPro:IPR012335,InterPro:IPR012336,UniProtKB%2FTrEMBL:Q7CGY8,Genbank:YP_002345856.1,GeneID:1173640;gbkey=CDS;product=hypothetical protein;protein_id=YP_002345856.1;transl_table=11
NC_003143.1	RefSeq	gene	881947	883590	.	-	.	ID=gene767;Name=cheD;Dbxref=GeneID:1173641;gbkey=Gene;gene=cheD;gene_synonym=tse;locus_tag=YPO0802
NC_003143.1	RefSeq	CDS	881947	883590	.	-	0	ID=cds738;Name=YP_002345857.1;Parent=gene767;Dbxref=InterPro:IPR003122,InterPro:IPR003660,InterPro:IPR004089,InterPro:IPR004090,UniProtKB%2FTrEMBL:Q0WIN1,Genbank:YP_002345857.1,GeneID:1173641;gbkey=CDS;gene=cheD;product=methyl-accepting chemotaxis protein;protein_id=YP_002345857.1;transl_table=11
NC_003143.1	RefSeq	region	883650	897327	.	-	.	ID=id555;Note=Region of DNA with a low CG%25 content%2C 32.8%25. Possible horizontal gene transfer;gbkey=misc_feature
NC_003143.1	RefSeq	gene	883793	884194	.	-	.	ID=gene768;Name=YPO0803;Dbxref=GeneID:1173642;gbkey=Gene;locus_tag=YPO0803
NC_003143.1	RefSeq	CDS	883793	884194	.	-	0	ID=cds739;Name=YP_002345858.1;Parent=gene768;Note=no significant database hits;Dbxref=UniProtKB%2FTrEMBL:Q74S06,Genbank:YP_002345858.1,GeneID:1173642;gbkey=CDS;product=hypothetical protein;protein_id=YP_002345858.1;transl_table=11
NC_003143.1	RefSeq	gene	884191	884907	.	-	.	ID=gene769;Name=YPO0804;Dbxref=GeneID:1173643;gbkey=Gene;locus_tag=YPO0804
NC_003143.1	RefSeq	CDS	884191	884907	.	-	0	ID=cds740;Name=YP_002345859.1;Parent=gene769;Dbxref=InterPro:IPR001867,InterPro:IPR011991,UniProtKB%2FTrEMBL:Q0WIM9,Genbank:YP_002345859.1,GeneID:1173643;gbkey=CDS;product=regulatory membrane protein;protein_id=YP_002345859.1;transl_table=11
NC_003143.1	RefSeq	gene	885191	885496	.	+	.	ID=gene770;Name=YPO0805;Dbxref=GeneID:1173644;gbkey=Gene;locus_tag=YPO0805
NC_003143.1	RefSeq	CDS	885191	885496	.	+	0	ID=cds741;Name=YP_002345860.1;Parent=gene770;Dbxref=UniProtKB%2FTrEMBL:Q0WIM8,Genbank:YP_002345860.1,GeneID:1173644;gbkey=CDS;product=lipoprotein;protein_id=YP_002345860.1;transl_table=11
NC_003143.1	RefSeq	region	885215	885247	.	+	.	ID=id556;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site.;Dbxref=GeneID:1173644;gbkey=misc_feature
NC_003143.1	RefSeq	gene	885548	886390	.	-	.	ID=gene771;Name=YPO0806;Dbxref=GeneID:1173645;gbkey=Gene;locus_tag=YPO0806
NC_003143.1	RefSeq	CDS	885548	886390	.	-	0	ID=cds742;Name=YP_002345861.1;Parent=gene771;Dbxref=InterPro:IPR000045,InterPro:IPR010627,UniProtKB%2FTrEMBL:Q0WIM7,Genbank:YP_002345861.1,GeneID:1173645;gbkey=CDS;product=prepilin peptidase;protein_id=YP_002345861.1;transl_table=11
NC_003143.1	RefSeq	region	886761	886826	.	-	.	ID=id557;Note=1 probable transmembrane helix predicted;gbkey=misc_feature
NC_003143.1	RefSeq	gene	886874	888043	.	-	.	ID=gene772;Name=YPO0808;Dbxref=GeneID:1173647;gbkey=Gene;locus_tag=YPO0808
NC_003143.1	RefSeq	CDS	886874	888043	.	-	0	ID=cds743;Name=YP_002345863.1;Parent=gene772;Dbxref=InterPro:IPR007812,UniProtKB%2FTrEMBL:Q0WIM5,Genbank:YP_002345863.1,GeneID:1173647;gbkey=CDS;product=general secretion pathway protein L;protein_id=YP_002345863.1;transl_table=11
NC_003143.1	RefSeq	region	887258	887323	.	-	.	ID=id558;Note=1 probable transmembrane helix predicted;Dbxref=GeneID:1173647;gbkey=misc_feature
NC_003143.1	RefSeq	gene	888048	889004	.	-	.	ID=gene773;Name=YPO0809;Dbxref=GeneID:1173648;gbkey=Gene;locus_tag=YPO0809
NC_003143.1	RefSeq	CDS	888048	889004	.	-	0	ID=cds744;Name=YP_002345864.1;Parent=gene773;Dbxref=InterPro:IPR000238,UniProtKB%2FTrEMBL:Q7CGY6,Genbank:YP_002345864.1,GeneID:1173648;gbkey=CDS;product=general secretion pathway protein K;protein_id=YP_002345864.1;transl_table=11
NC_003143.1	RefSeq	region	888918	888983	.	-	.	ID=id559;Note=1 probable transmembrane helix predicted;Dbxref=GeneID:1173648;gbkey=misc_feature
NC_003143.1	RefSeq	gene	889013	889609	.	-	.	ID=gene774;Name=YPO0810;Dbxref=GeneID:1173649;gbkey=Gene;locus_tag=YPO0810
NC_003143.1	RefSeq	CDS	889013	889609	.	-	0	ID=cds745;Name=YP_002345865.1;Parent=gene774;Dbxref=InterPro:IPR010055,InterPro:IPR012902,UniProtKB%2FTrEMBL:Q0WIM3,Genbank:YP_002345865.1,GeneID:1173649;gbkey=CDS;product=general secretion pathway protein J;protein_id=YP_002345865.1;transl_table=11
NC_003143.1	RefSeq	region	889514	889579	.	-	.	ID=id560;Note=1 probable transmembrane helix predicted;Dbxref=GeneID:1173649;gbkey=misc_feature
NC_003143.1	RefSeq	gene	889602	889946	.	-	.	ID=gene775;Name=YPO0811;Dbxref=GeneID:1173650;gbkey=Gene;locus_tag=YPO0811
NC_003143.1	RefSeq	CDS	889602	889946	.	-	0	ID=cds746;Name=YP_002345866.1;Parent=gene775;Dbxref=InterPro:IPR003413,InterPro:IPR010052,UniProtKB%2FTrEMBL:Q74S14,Genbank:YP_002345866.1,GeneID:1173650;gbkey=CDS;product=general secretion pathway protein I;protein_id=YP_002345866.1;transl_table=11
NC_003143.1	RefSeq	region	889869	889934	.	-	.	ID=id561;Note=1 probable transmembrane helix predicted;Dbxref=GeneID:1173650;gbkey=misc_feature
NC_003143.1	RefSeq	gene	889984	890526	.	-	.	ID=gene776;Name=YPO0812;Dbxref=GeneID:1173651;gbkey=Gene;locus_tag=YPO0812
NC_003143.1	RefSeq	CDS	889984	890526	.	-	0	ID=cds747;Name=YP_002345867.1;Parent=gene776;Dbxref=InterPro:IPR002416,InterPro:IPR012902,UniProtKB%2FTrEMBL:Q0WIM1,Genbank:YP_002345867.1,GeneID:1173651;gbkey=CDS;product=general secretion pathway protein H;protein_id=YP_002345867.1;transl_table=11
NC_003143.1	RefSeq	region	890275	890292	.	-	.	ID=id562;Note=PS00190 Cytochrome c family heme-binding site signature.;Dbxref=GeneID:1173651;gbkey=misc_feature
NC_003143.1	RefSeq	region	890440	890505	.	-	.	ID=id563;Note=1 probable transmembrane helix predicted;Dbxref=GeneID:1173651;gbkey=misc_feature
NC_003143.1	RefSeq	gene	890531	890968	.	-	.	ID=gene777;Name=YPO0813;Dbxref=GeneID:1173652;gbkey=Gene;locus_tag=YPO0813
NC_003143.1	RefSeq	CDS	890531	890968	.	-	0	ID=cds748;Name=YP_002345868.1;Parent=gene777;Dbxref=InterPro:IPR000983,InterPro:IPR001120,InterPro:IPR002416,InterPro:IPR010054,InterPro:IPR012902,InterPro:IPR013545,UniProtKB%2FTrEMBL:Q7CGY5,Genbank:YP_002345868.1,GeneID:1173652;gbkey=CDS;product=general secretion pathway protein G;protein_id=YP_002345868.1;transl_table=11
NC_003143.1	RefSeq	region	890870	890926	.	-	.	ID=id564;Note=1 probable transmembrane helix predicted;Dbxref=GeneID:1173652;gbkey=misc_feature
NC_003143.1	RefSeq	gene	890988	892004	.	-	.	ID=gene778;Name=YPO0814;Dbxref=GeneID:1173653;gbkey=Gene;locus_tag=YPO0814
NC_003143.1	RefSeq	CDS	890988	892004	.	-	0	ID=cds749;Name=YP_008479685.1;Parent=gene778;Dbxref=Genbank:YP_008479685.1,GeneID:1173653;gbkey=CDS;product=type II secretion system protein;protein_id=YP_008479685.1;transl_table=11
NC_003143.1	RefSeq	region	891162	891287	.	-	.	ID=id565;Note=PS00041 Bacterial regulatory proteins%2C araC family signature.;Dbxref=GeneID:1173653;gbkey=misc_feature
NC_003143.1	RefSeq	region	891624	891710	.	-	.	ID=id566;Note=PS00874 Bacterial type II secretion system protein F signature.;Dbxref=GeneID:1173653;gbkey=misc_feature
NC_003143.1	RefSeq	gene	892176	893687	.	-	.	ID=gene779;Name=YPO0815;Dbxref=GeneID:1173654;gbkey=Gene;locus_tag=YPO0815
NC_003143.1	RefSeq	CDS	892176	893687	.	-	0	ID=cds750;Name=YP_002345869.1;Parent=gene779;Dbxref=InterPro:IPR001482,InterPro:IPR003593,UniProtKB%2FTrEMBL:Q7CGY4,Genbank:YP_002345869.1,GeneID:1173654;gbkey=CDS;product=general secretion pathway protein E;protein_id=YP_002345869.1;transl_table=11
NC_003143.1	RefSeq	region	892698	892742	.	-	.	ID=id567;Note=PS00662 Bacterial type II secretion system protein E signature.;Dbxref=GeneID:1173654;gbkey=misc_feature
NC_003143.1	RefSeq	region	892896	892919	.	-	.	ID=id568;Note=PS00017 ATP%2FGTP-binding site motif A %28P-loop%29.;Dbxref=GeneID:1173654;gbkey=misc_feature
NC_003143.1	RefSeq	gene	893684	895606	.	-	.	ID=gene780;Name=YPO0816;Dbxref=GeneID:1173655;gbkey=Gene;locus_tag=YPO0816
NC_003143.1	RefSeq	CDS	893684	895606	.	-	0	ID=cds751;Name=YP_002345870.1;Parent=gene780;Dbxref=InterPro:IPR001775,InterPro:IPR002114,InterPro:IPR004845,InterPro:IPR004846,InterPro:IPR005644,InterPro:IPR013356,UniProtKB%2FTrEMBL:Q0WIL8,Genbank:YP_002345870.1,GeneID:1173655;gbkey=CDS;product=general secretion pathway protein D;protein_id=YP_002345870.1;transl_table=11
NC_003143.1	RefSeq	region	893930	894031	.	-	.	ID=id569;Note=PS00875 Bacterial type II secretion system protein D signature.;Dbxref=GeneID:1173655;gbkey=misc_feature
NC_003143.1	RefSeq	region	894824	894871	.	-	.	ID=id570;Note=PS00589 PTS HPR component serine phosphorylation site signature.;Dbxref=GeneID:1173655;gbkey=misc_feature
NC_003143.1	RefSeq	region	895502	895567	.	-	.	ID=id571;Note=1 probable transmembrane helix predicted;Dbxref=GeneID:1173655;gbkey=misc_feature
NC_003143.1	RefSeq	gene	895687	896190	.	-	.	ID=gene781;Name=YPO0817;Dbxref=GeneID:1173656;gbkey=Gene;locus_tag=YPO0817
NC_003143.1	RefSeq	CDS	895687	896190	.	-	0	ID=cds752;Name=YP_002345871.1;Parent=gene781;Dbxref=UniProtKB%2FTrEMBL:Q0WIL7,Genbank:YP_002345871.1,GeneID:1173656;gbkey=CDS;product=general secretion pathway protein C;protein_id=YP_002345871.1;transl_table=11
NC_003143.1	RefSeq	region	896065	896130	.	-	.	ID=id572;Note=1 probable transmembrane helix predicted;Dbxref=GeneID:1173656;gbkey=misc_feature
NC_003143.1	RefSeq	gene	896258	896674	.	-	.	ID=gene782;Name=YPO0818;Dbxref=GeneID:1173657;gbkey=Gene;locus_tag=YPO0818
NC_003143.1	RefSeq	CDS	896258	896674	.	-	0	ID=cds753;Name=YP_002345872.1;Parent=gene782;Dbxref=InterPro:IPR001867,UniProtKB%2FTrEMBL:Q7CGY3,Genbank:YP_002345872.1,GeneID:1173657;gbkey=CDS;product=hypothetical protein;protein_id=YP_002345872.1;transl_table=11
NC_003143.1	RefSeq	gene	897417	898172	.	-	.	ID=gene783;Name=YPO0819;Dbxref=GeneID:1173658;gbkey=Gene;locus_tag=YPO0819
NC_003143.1	RefSeq	CDS	897417	898172	.	-	0	ID=cds754;Name=YP_002345873.1;Parent=gene783;Dbxref=InterPro:IPR001765,InterPro:IPR003016,InterPro:IPR006311,UniProtKB%2FTrEMBL:Q7CGY2,Genbank:YP_002345873.1,GeneID:1173658;gbkey=CDS;product=carbonic anhydrase;protein_id=YP_002345873.1;transl_table=11
NC_003143.1	RefSeq	region	898044	898109	.	-	.	ID=id573;Note=1 probable transmembrane helix predicted;Dbxref=GeneID:1173658;gbkey=misc_feature
NC_003143.1	RefSeq	gene	898548	898856	.	+	.	ID=gene784;Name=YPO0820;Dbxref=GeneID:1173659;gbkey=Gene;locus_tag=YPO0820
NC_003143.1	RefSeq	CDS	898548	898856	.	+	0	ID=cds755;Name=YP_002345874.1;Parent=gene784;Note=no significant database hits;Dbxref=UniProtKB%2FTrEMBL:Q7CGY1,Genbank:YP_002345874.1,GeneID:1173659;gbkey=CDS;product=hypothetical protein;protein_id=YP_002345874.1;transl_table=11
NC_003143.1	RefSeq	gene	899459	900409	.	+	.	ID=gene785;Name=YPO0822;Dbxref=GeneID:1173661;gbkey=Gene;locus_tag=YPO0822
NC_003143.1	RefSeq	CDS	899459	900409	.	+	0	ID=cds756;Name=YP_002345876.1;Parent=gene785;Dbxref=UniProtKB%2FTrEMBL:Q7CGY0,Genbank:YP_002345876.1,GeneID:1173661;gbkey=CDS;product=hypothetical protein;protein_id=YP_002345876.1;transl_table=11
NC_003143.1	RefSeq	gene	900524	902710	.	+	.	ID=gene786;Name=YPO0823;Dbxref=GeneID:1173662;gbkey=Gene;locus_tag=YPO0823
NC_003143.1	RefSeq	CDS	900524	902710	.	+	0	ID=cds757;Name=YP_002345877.1;Parent=gene786;Dbxref=InterPro:IPR005546,InterPro:IPR006315,UniProtKB%2FTrEMBL:Q0WIL1,Genbank:YP_002345877.1,GeneID:1173662;gbkey=CDS;product=hypothetical protein;protein_id=YP_002345877.1;transl_table=11
NC_003143.1	RefSeq	gene	902780	905893	.	+	.	ID=gene787;Name=YPO0824;Dbxref=GeneID:1173663;gbkey=Gene;locus_tag=YPO0824
NC_003143.1	RefSeq	CDS	902780	905893	.	+	0	ID=cds758;Name=YP_002345878.1;Parent=gene787;Dbxref=InterPro:IPR003159,InterPro:IPR008929,InterPro:IPR008979,InterPro:IPR011013,InterPro:IPR011071,InterPro:IPR012329,UniProtKB%2FTrEMBL:Q0WIL0,Genbank:YP_002345878.1,GeneID:1173663;gbkey=CDS;product=hypothetical protein;protein_id=YP_002345878.1;transl_table=11
NC_003143.1	RefSeq	repeat_region	905968	906173	.	+	.	ID=id574;Note=Also a member of the IS200-like elements which carry a %27G%27 at nucleotide position 315 of the complete element. 3%27 termini is represented by misc_feature 908122..908638%7EDisrupted IS200-like insertion sequence:IS1541;gbkey=repeat_region
NC_003143.1	RefSeq	region	906113	906169	.	+	.	ID=id575;Note=This CDS has been disrupted by the insertion of IS100. Identical to Yersinia pseudotuberculosis transposase Tnp TR:Q9X9F5 %28EMBL:AJ238014%29 %28152 aa%29 fasta scores: E%28%29: 5.3e-67%2C 100.000%25 id in 152 aa;Dbxref=PSEUDO:CAL19497.1;gbkey=misc_feature;part=1%2F2;pseudo=true
NC_003143.1	RefSeq	region	908129	908530	.	+	.	ID=id575;Note=This CDS has been disrupted by the insertion of IS100. Identical to Yersinia pseudotuberculosis transposase Tnp TR:Q9X9F5 %28EMBL:AJ238014%29 %28152 aa%29 fasta scores: E%28%29: 5.3e-67%2C 100.000%25 id in 152 aa;Dbxref=PSEUDO:CAL19497.1;gbkey=misc_feature;part=2%2F2;pseudo=true
NC_003143.1	RefSeq	repeat_region	906172	908125	.	-	.	ID=id576;Note=insertion sequence:IS100;gbkey=repeat_region
NC_003143.1	RefSeq	repeat_region	906172	906199	.	+	.	ID=id577;Note=IS100 inverted repeat;gbkey=repeat_region
NC_003143.1	RefSeq	gene	906238	907020	.	-	.	ID=gene788;Name=YPO0825;Note=ypmt1.57c;Dbxref=GeneID:1173665;gbkey=Gene;locus_tag=YPO0825
NC_003143.1	RefSeq	CDS	906238	907020	.	-	0	ID=cds759;Name=YP_002345879.1;Parent=gene788;Dbxref=InterPro:IPR001270,InterPro:IPR002611,InterPro:IPR003593,UniProtKB%2FTrEMBL:Q7ARK4,Genbank:YP_002345879.1,GeneID:1173665;gbkey=CDS;product=transposase%2FIS protein;protein_id=YP_002345879.1;transl_table=11
NC_003143.1	RefSeq	region	906670	906693	.	-	.	ID=id578;Note=PS00017 ATP%2FGTP-binding site motif A %28P-loop%29.;Dbxref=GeneID:1173665;gbkey=misc_feature
NC_003143.1	RefSeq	gene	907017	908039	.	-	.	ID=gene789;Name=y1093;Dbxref=GeneID:1173666;gbkey=Gene;gene=y1093;gene_synonym=ypmt1;locus_tag=YPO0826
NC_003143.1	RefSeq	CDS	907017	908039	.	-	0	ID=cds760;Name=YP_002345880.1;Parent=gene789;Dbxref=InterPro:IPR001584,InterPro:IPR006120,InterPro:IPR009057,InterPro:IPR012287,InterPro:IPR012337,UniProtKB%2FTrEMBL:Q7ARN5,Genbank:YP_002345880.1,GeneID:1173666;gbkey=CDS;gene=y1093;product=transposase for insertion sequence IS100;protein_id=YP_002345880.1;transl_table=11
NC_003143.1	RefSeq	region	907923	907988	.	-	.	ID=id579;Note=Predicted helix-turn-helix motif with score 2147 %28%2B6.50 SD%29 at aa 18-39%2C sequence MSSRAIARELGISRNTVKRYLQ;Dbxref=GeneID:1173666;gbkey=misc_feature;gene=y1093
NC_003143.1	RefSeq	gene	908096	908530	.	+	.	ID=gene790;Name=YPO828a;Dbxref=GeneID:16744742;gbkey=Gene;locus_tag=YPO828a
NC_003143.1	RefSeq	CDS	908096	908530	.	+	0	ID=cds761;Name=YP_008479686.1;Parent=gene790;Dbxref=Genbank:YP_008479686.1,GeneID:16744742;gbkey=CDS;product=transposase;protein_id=YP_008479686.1;transl_table=11
NC_003143.1	RefSeq	repeat_region	908098	908125	.	-	.	ID=id580;Note=IS100 inverted repeat;gbkey=repeat_region
NC_003143.1	RefSeq	repeat_region	908122	908638	.	+	.	ID=id581;Note=Also a member of the IS200-like elements which carry a %27G%27 at nucleotide position 315 of the complete element. 5%27 termini is represented by misc_feature 905968..906173%7EDisrupted IS200-like insertion sequence:IS1541;gbkey=repeat_region
NC_003143.1	RefSeq	gene	908982	910535	.	-	.	ID=gene791;Name=YPO0829;Dbxref=GeneID:1173667;gbkey=Gene;locus_tag=YPO0829
NC_003143.1	RefSeq	CDS	908982	910535	.	-	0	ID=cds762;Name=YP_002345881.1;Parent=gene791;Dbxref=InterPro:IPR000917,InterPro:IPR006311,UniProtKB%2FTrEMBL:Q7CGX7,Genbank:YP_002345881.1,GeneID:1173667;gbkey=CDS;product=sulfatase;protein_id=YP_002345881.1;transl_table=11
NC_003143.1	RefSeq	gene	911375	912151	.	+	.	ID=gene792;Name=YPO0831;Dbxref=GeneID:1173668;gbkey=Gene;locus_tag=YPO0831
NC_003143.1	RefSeq	CDS	911375	912151	.	+	0	ID=cds763;Name=YP_002345882.1;Parent=gene792;Dbxref=InterPro:IPR001034,InterPro:IPR011991,UniProtKB%2FTrEMBL:Q7CGX6,Genbank:YP_002345882.1,GeneID:1173668;gbkey=CDS;product=DeoR family regulatory protein;protein_id=YP_002345882.1;transl_table=11
NC_003143.1	RefSeq	region	911435	911500	.	+	.	ID=id582;Note=Predicted helix-turn-helix motif with score 1114 %28%2B2.98 SD%29 at aa 21-42%2C sequence ARVEDLAERFNVSSVTIRSDLS;Dbxref=GeneID:1173668;gbkey=misc_feature
NC_003143.1	RefSeq	gene	912201	913499	.	+	.	ID=gene793;Name=agaZ;Dbxref=GeneID:1173669;gbkey=Gene;gene=agaZ;locus_tag=YPO0832
NC_003143.1	RefSeq	CDS	912201	913499	.	+	0	ID=cds764;Name=YP_002345883.1;Parent=gene793;Dbxref=InterPro:IPR012062,UniProtKB%2FTrEMBL:Q7CGX5,Genbank:YP_002345883.1,GeneID:1173669;gbkey=CDS;gene=agaZ;product=tagatose 6-phosphate kinase;protein_id=YP_002345883.1;transl_table=11
NC_003143.1	RefSeq	gene	913496	914662	.	+	.	ID=gene794;Name=agaZ;Dbxref=GeneID:1173670;gbkey=Gene;gene=agaZ;locus_tag=YPO0833
NC_003143.1	RefSeq	CDS	913496	914662	.	+	0	ID=cds765;Name=YP_002345884.1;Parent=gene794;Dbxref=InterPro:IPR001347,UniProtKB%2FTrEMBL:Q7CGX4,Genbank:YP_002345884.1,GeneID:1173670;gbkey=CDS;product=phosphosugar isomerase;protein_id=YP_002345884.1;transl_table=11
NC_003143.1	RefSeq	gene	914680	915177	.	+	.	ID=gene795;Name=manX;Dbxref=GeneID:1173671;gbkey=Gene;gene=manX;locus_tag=YPO0834
NC_003143.1	RefSeq	CDS	914680	915177	.	+	0	ID=cds766;Name=YP_002345885.1;Parent=gene795;Dbxref=InterPro:IPR004720,UniProtKB%2FTrEMBL:Q7CGX3,Genbank:YP_002345885.1,GeneID:1173671;gbkey=CDS;gene=manX;product=PTS transport protein;protein_id=YP_002345885.1;transl_table=11
NC_003143.1	RefSeq	gene	915224	916012	.	+	.	ID=gene796;Name=YPO0835;Dbxref=GeneID:1173672;gbkey=Gene;locus_tag=YPO0835
NC_003143.1	RefSeq	CDS	915224	916012	.	+	0	ID=cds767;Name=YP_002345886.1;Parent=gene796;Dbxref=InterPro:IPR004700,UniProtKB%2FTrEMBL:Q7CGX2,Genbank:YP_002345886.1,GeneID:1173672;gbkey=CDS;product=PTS permease;protein_id=YP_002345886.1;transl_table=11
NC_003143.1	RefSeq	gene	916002	916892	.	+	.	ID=gene797;Name=YPO0836;Dbxref=GeneID:1173673;gbkey=Gene;locus_tag=YPO0836
NC_003143.1	RefSeq	CDS	916002	916892	.	+	0	ID=cds768;Name=YP_002345887.1;Parent=gene797;Dbxref=InterPro:IPR004704,UniProtKB%2FTrEMBL:Q74QF1,Genbank:YP_002345887.1,GeneID:1173673;gbkey=CDS;product=PTS permease;protein_id=YP_002345887.1;transl_table=11
NC_003143.1	RefSeq	region	916695	916718	.	+	.	ID=id583;Note=PS00017 ATP%2FGTP-binding site motif A %28P-loop%29.;Dbxref=GeneID:1173673;gbkey=misc_feature
NC_003143.1	RefSeq	gene	916978	917418	.	+	.	ID=gene798;Name=YPO0837;Dbxref=GeneID:1173674;gbkey=Gene;locus_tag=YPO0837
NC_003143.1	RefSeq	CDS	916978	917418	.	+	0	ID=cds769;Name=YP_002345888.1;Parent=gene798;Dbxref=Genbank:YP_002345888.1,GeneID:1173674;gbkey=CDS;product=PTS permease;protein_id=YP_002345888.1;transl_table=11
NC_003143.1	RefSeq	gene	917421	918587	.	+	.	ID=gene799;Name=YPO0838;Dbxref=GeneID:1173675;gbkey=Gene;locus_tag=YPO0838
NC_003143.1	RefSeq	CDS	917421	918587	.	+	0	ID=cds770;Name=YP_002345889.1;Parent=gene799;Dbxref=InterPro:IPR003764,InterPro:IPR006680,InterPro:IPR011059,UniProtKB%2FTrEMBL:Q7CGX1,Genbank:YP_002345889.1,GeneID:1173675;gbkey=CDS;product=acetylglucosamine-6-phosphate deacetylase;protein_id=YP_002345889.1;transl_table=11
NC_003143.1	RefSeq	gene	918783	919538	.	+	.	ID=gene800;Name=kduD2;Dbxref=GeneID:1173676;gbkey=Gene;gene=kduD2;locus_tag=YPO0839
NC_003143.1	RefSeq	CDS	918783	919538	.	+	0	ID=cds771;Name=YP_002345890.1;Parent=gene800;Note=catalyzes the formation of 3-dehydro-2-deoxy-D-gluconate from 2-deoxy-D-gluconate;Dbxref=InterPro:IPR002198,InterPro:IPR002347,InterPro:IPR011286,UniProtKB%2FTrEMBL:Q7CGX0,Genbank:YP_002345890.1,GeneID:1173676;gbkey=CDS;gene=kduD2;product=2-deoxy-D-gluconate 3-dehydrogenase;protein_id=YP_002345890.1;transl_table=11
NC_003143.1	RefSeq	region	919209	919295	.	+	.	ID=id584;Note=PS00061 Short-chain dehydrogenases%2Freductases family signature.;Dbxref=GeneID:1173676;gbkey=misc_feature;gene=kduD2
NC_003143.1	RefSeq	gene	919554	920612	.	+	.	ID=gene801;Name=YPO0840;Dbxref=GeneID:1173677;gbkey=Gene;locus_tag=YPO0840
NC_003143.1	RefSeq	CDS	919554	920612	.	+	0	ID=cds772;Name=YP_002345891.1;Parent=gene801;Dbxref=InterPro:IPR008928,InterPro:IPR010905,UniProtKB%2FTrEMBL:Q7CGW9,Genbank:YP_002345891.1,GeneID:1173677;gbkey=CDS;product=hypothetical protein;protein_id=YP_002345891.1;transl_table=11
NC_003143.1	RefSeq	gene	920856	922082	.	+	.	ID=gene802;Name=YPO0841;Dbxref=GeneID:1173678;gbkey=Gene;locus_tag=YPO0841
NC_003143.1	RefSeq	CDS	920856	922082	.	+	0	ID=cds773;Name=YP_002345892.1;Parent=gene802;Dbxref=InterPro:IPR007197,UniProtKB%2FTrEMBL:Q7CGW8,Genbank:YP_002345892.1,GeneID:1173678;gbkey=CDS;product=regulatory protein;protein_id=YP_002345892.1;transl_table=11
NC_003143.1	RefSeq	gene	922103	923710	.	+	.	ID=gene803;Name=YPO0842;Dbxref=GeneID:1173679;gbkey=Gene;locus_tag=YPO0842
NC_003143.1	RefSeq	CDS	922103	923710	.	+	0	ID=cds774;Name=YP_002345893.1;Parent=gene803;Dbxref=InterPro:IPR000917,UniProtKB%2FTrEMBL:Q7CGW7,Genbank:YP_002345893.1,GeneID:1173679;gbkey=CDS;product=sulfatase;protein_id=YP_002345893.1;transl_table=11
NC_003143.1	RefSeq	region	922553	922585	.	+	.	ID=id585;Note=PS00149 Sulfatases signature 2.;Dbxref=GeneID:1173679;gbkey=misc_feature
NC_003143.1	RefSeq	gene	923833	925320	.	+	.	ID=gene804;Name=YPO0843;Dbxref=GeneID:1173680;gbkey=Gene;locus_tag=YPO0843
NC_003143.1	RefSeq	CDS	923833	925320	.	+	0	ID=cds775;Name=YP_002345894.1;Parent=gene804;Dbxref=UniProtKB%2FTrEMBL:Q7CGW6,Genbank:YP_002345894.1,GeneID:1173680;gbkey=CDS;product=hypothetical protein;protein_id=YP_002345894.1;transl_table=11
NC_003143.1	RefSeq	region	924334	924399	.	+	.	ID=id586;Note=Predicted helix-turn-helix motif with score 1221 %28%2B3.35 SD%29 at aa 168-189%2C sequence CESADLALALWLSHESVWQAFT;Dbxref=GeneID:1173680;gbkey=misc_feature
NC_003143.1	RefSeq	gene	925429	926283	.	+	.	ID=gene805;Name=gatY;Dbxref=GeneID:1173681;gbkey=Gene;gene=gatY;gene_synonym=kba;locus_tag=YPO0844
NC_003143.1	RefSeq	CDS	925429	926283	.	+	0	ID=cds776;Name=YP_002345895.1;Parent=gene805;Note=catalyzes the reversible reaction of dihydroxyacetone phosphate with glyceraldehyde 3-phosphate to produce tagatose 1%2C6-bisphosphate%3B in enteric bacteria there are two D-tagatose 1%2C6-bisphosphate-specific aldolases: KbaY %28also called AgaY%29%2C involved in catabolism of N-acetyl-galactosamine and D-galactosamine%2C and GatY which is part of the galactitol catabolism pathway;Dbxref=InterPro:IPR000771,InterPro:IPR011288,UniProtKB%2FTrEMBL:Q7CGW5,Genbank:YP_002345895.1,GeneID:1173681;gbkey=CDS;gene=gatY;product=tagatose-bisphosphate aldolase;protein_id=YP_002345895.1;transl_table=11
NC_003143.1	RefSeq	region	925819	925854	.	+	.	ID=id587;Note=PS00806 Fructose-bisphosphate aldolase class-II signature 2.;Dbxref=GeneID:1173681;gbkey=misc_feature;gene=gatY
NC_003143.1	RefSeq	gene	926307	926885	.	+	.	ID=gene806;Name=YPO0845;Dbxref=GeneID:1173682;gbkey=Gene;locus_tag=YPO0845
NC_003143.1	RefSeq	CDS	926307	926885	.	+	0	ID=cds777;Name=YP_002345896.1;Parent=gene806;Dbxref=InterPro:IPR002818,UniProtKB%2FTrEMBL:Q7CGW4,Genbank:YP_002345896.1,GeneID:1173682;gbkey=CDS;product=ThiJ%2FPfpI family thiamine biogenesis protein;protein_id=YP_002345896.1;transl_table=11
NC_003143.1	RefSeq	gene	927126	928208	.	-	.	ID=gene807;Name=YPO0846;Dbxref=GeneID:1173683;gbkey=Gene;locus_tag=YPO0846
NC_003143.1	RefSeq	CDS	927126	928208	.	-	0	ID=cds778;Name=YP_002345897.1;Parent=gene807;Dbxref=InterPro:IPR000843,InterPro:IPR001761,InterPro:IPR010982,UniProtKB%2FTrEMBL:Q7CGW3,Genbank:YP_002345897.1,GeneID:1173683;gbkey=CDS;product=LacI family regulatory protein;protein_id=YP_002345897.1;transl_table=11
NC_003143.1	RefSeq	region	928131	928196	.	-	.	ID=id588;Note=Predicted helix-turn-helix motif with score 2041 %28%2B6.14 SD%29 at aa 5-26%2C sequence LKIQEIANQTGLSISTVSRVLA;Dbxref=GeneID:1173683;gbkey=misc_feature
NC_003143.1	RefSeq	gene	928602	929909	.	+	.	ID=gene808;Name=YPO0847;Dbxref=GeneID:1173684;gbkey=Gene;locus_tag=YPO0847
NC_003143.1	RefSeq	CDS	928602	929909	.	+	0	ID=cds779;Name=YP_002345898.1;Parent=gene808;Dbxref=InterPro:IPR007114,InterPro:IPR011701,UniProtKB%2FTrEMBL:Q7CGW2,Genbank:YP_002345898.1,GeneID:1173684;gbkey=CDS;product=sugar transporter;protein_id=YP_002345898.1;transl_table=11
NC_003143.1	RefSeq	gene	930057	932435	.	+	.	ID=gene809;Name=YPO0848;Dbxref=GeneID:1173685;gbkey=Gene;locus_tag=YPO0848
NC_003143.1	RefSeq	CDS	930057	932435	.	+	0	ID=cds780;Name=YP_002345899.1;Parent=gene809;Dbxref=InterPro:IPR000322,UniProtKB%2FTrEMBL:Q7CGW1,Genbank:YP_002345899.1,GeneID:1173685;gbkey=CDS;product=glucosidase;protein_id=YP_002345899.1;transl_table=11
NC_003143.1	RefSeq	region	930552	930596	.	+	.	ID=id589;Note=PS00066 Hydroxymethylglutaryl-coenzyme A reductases signature 1.;Dbxref=GeneID:1173685;gbkey=misc_feature
NC_003143.1	RefSeq	gene	932764	933837	.	-	.	ID=gene810;Name=lacI;Dbxref=GeneID:1173686;gbkey=Gene;gene=lacI;locus_tag=YPO0849
NC_003143.1	RefSeq	CDS	932764	933837	.	-	0	ID=cds781;Name=YP_002345900.1;Parent=gene810;Note=transcriptional repressor of lac operon%3B forms a homotetramer as a dimer of dimers%3B binds specific sites in lac operon resulting in DNA looping between the operators%3B binds allolactose as inducer;Dbxref=InterPro:IPR000843,InterPro:IPR001761,InterPro:IPR010982,UniProtKB%2FTrEMBL:Q0WII8,Genbank:YP_002345900.1,GeneID:1173686;gbkey=CDS;gene=lacI;product=lac repressor;protein_id=YP_002345900.1;transl_table=11
NC_003143.1	RefSeq	region	933757	933822	.	-	.	ID=id590;Note=Predicted helix-turn-helix motif with score 2321 %28%2B7.09 SD%29 at aa 6-27%2C sequence TTLEDVARHAGVSYQTVSRVLN;Dbxref=GeneID:1173686;gbkey=misc_feature;gene=lacI
NC_003143.1	RefSeq	region	933760	933816	.	-	.	ID=id591;Note=PS00356 Bacterial regulatory proteins%2C lacI family signature.;Dbxref=GeneID:1173686;gbkey=misc_feature;gene=lacI
NC_003143.1	RefSeq	gene	934109	935368	.	+	.	ID=gene811;Name=lamB;Dbxref=GeneID:1173687;gbkey=Gene;gene=lamB;gene_synonym=malB;locus_tag=YPO0850
NC_003143.1	RefSeq	CDS	934109	935368	.	+	0	ID=cds782;Name=YP_002345901.1;Parent=gene811;Note=porin involved in the transport of maltose and maltodextrins;Dbxref=InterPro:IPR003192,UniProtKB%2FTrEMBL:Q0WII7,Genbank:YP_002345901.1,GeneID:1173687;gbkey=CDS;gene=lamB;product=maltoporin;protein_id=YP_002345901.1;transl_table=11
NC_003143.1	RefSeq	gene	935741	936052	.	-	.	ID=gene812;Name=YPO0850a;Dbxref=GeneID:17699567;gbkey=Gene;locus_tag=YPO0850a
NC_003143.1	RefSeq	CDS	935741	936052	.	-	0	ID=cds783;Name=YP_008853944.1;Parent=gene812;Dbxref=Genbank:YP_008853944.1,GeneID:17699567;gbkey=CDS;product=PTS system glucose%2Fsucrose specific transporter subunit IIB;protein_id=YP_008853944.1;transl_table=11
NC_003143.1	RefSeq	gene	936164	938224	.	-	.	ID=gene813;Name=bgaB;Dbxref=GeneID:1173689;gbkey=Gene;gene=bgaB;gene_synonym=pbg;locus_tag=YPO0852
NC_003143.1	RefSeq	CDS	936164	938224	.	-	0	ID=cds784;Name=YP_002345903.1;Parent=gene813;Dbxref=InterPro:IPR003476,InterPro:IPR013529,InterPro:IPR013738,InterPro:IPR013739,InterPro:IPR013780,InterPro:IPR013781,UniProtKB%2FTrEMBL:Q7CGV9,Genbank:YP_002345903.1,GeneID:1173689;gbkey=CDS;gene=bgaB;product=beta-galactosidase;protein_id=YP_002345903.1;transl_table=11
NC_003143.1	RefSeq	gene	938275	939477	.	-	.	ID=gene814;Name=YPO0853;Dbxref=GeneID:1173690;gbkey=Gene;locus_tag=YPO0853
NC_003143.1	RefSeq	CDS	938275	939477	.	-	0	ID=cds785;Name=YP_002345904.1;Parent=gene814;Dbxref=InterPro:IPR011683,InterPro:IPR013781,UniProtKB%2FTrEMBL:Q7CGV8,Genbank:YP_002345904.1,GeneID:1173690;gbkey=CDS;product=galactosidase;protein_id=YP_002345904.1;transl_table=11
NC_003143.1	RefSeq	gene	939482	940333	.	-	.	ID=gene815;Name=YPO0854;Dbxref=GeneID:1173691;gbkey=Gene;locus_tag=YPO0854
NC_003143.1	RefSeq	CDS	939482	940333	.	-	0	ID=cds786;Name=YP_002345905.1;Parent=gene815;Dbxref=InterPro:IPR000515,UniProtKB%2FTrEMBL:Q7CGV7,Genbank:YP_002345905.1,GeneID:1173691;gbkey=CDS;product=maltodextrin permease;protein_id=YP_002345905.1;transl_table=11
NC_003143.1	RefSeq	region	939749	939835	.	-	.	ID=id592;Note=PS00402 Binding-protein-dependent transport systems inner membrane comp. sign.;Dbxref=GeneID:1173691;gbkey=misc_feature
NC_003143.1	RefSeq	gene	940345	941652	.	-	.	ID=gene816;Name=YPO0855;Dbxref=GeneID:1173692;gbkey=Gene;locus_tag=YPO0855
NC_003143.1	RefSeq	CDS	940345	941652	.	-	0	ID=cds787;Name=YP_002345906.1;Parent=gene816;Dbxref=InterPro:IPR000515,UniProtKB%2FTrEMBL:Q7CGV6,Genbank:YP_002345906.1,GeneID:1173692;gbkey=CDS;product=maltodextrin ABC transporter permease;protein_id=YP_002345906.1;transl_table=11
NC_003143.1	RefSeq	region	940627	940713	.	-	.	ID=id593;Note=PS00402 Binding-protein-dependent transport systems inner membrane comp. sign.;Dbxref=GeneID:1173692;gbkey=misc_feature
NC_003143.1	RefSeq	gene	941812	943074	.	-	.	ID=gene817;Name=YPO0856;Dbxref=GeneID:1173693;gbkey=Gene;locus_tag=YPO0856
NC_003143.1	RefSeq	CDS	941812	943074	.	-	0	ID=cds788;Name=YP_002345907.1;Parent=gene817;Dbxref=InterPro:IPR006059,InterPro:IPR006060,UniProtKB%2FTrEMBL:Q7CGV5,Genbank:YP_002345907.1,GeneID:1173693;gbkey=CDS;product=sugar-binding protein;protein_id=YP_002345907.1;transl_table=11
NC_003143.1	RefSeq	gene	943410	944510	.	+	.	ID=gene818;Name=YPO0857;Dbxref=GeneID:1173694;gbkey=Gene;locus_tag=YPO0857
NC_003143.1	RefSeq	CDS	943410	944510	.	+	0	ID=cds789;Name=YP_002345908.1;Parent=gene818;Dbxref=InterPro:IPR003439,InterPro:IPR003593,InterPro:IPR005116,InterPro:IPR008995,UniProtKB%2FTrEMBL:Q0WII0,Genbank:YP_002345908.1,GeneID:1173694;gbkey=CDS;product=sugar transport ATP-binding protein;protein_id=YP_002345908.1;transl_table=11
NC_003143.1	RefSeq	region	943515	943538	.	+	.	ID=id594;Note=PS00017 ATP%2FGTP-binding site motif A %28P-loop%29.;Dbxref=GeneID:1173694;gbkey=misc_feature
NC_003143.1	RefSeq	region	943809	943853	.	+	.	ID=id595;Note=PS00211 ABC transporters family signature.;Dbxref=GeneID:1173694;gbkey=misc_feature
NC_003143.1	RefSeq	gene	945059	946567	.	+	.	ID=gene819;Name=YPO0858;Dbxref=GeneID:1173695;gbkey=Gene;locus_tag=YPO0858
NC_003143.1	RefSeq	CDS	945059	946567	.	+	0	ID=cds790;Name=YP_002345909.1;Parent=gene819;Dbxref=InterPro:IPR003439,InterPro:IPR003593,UniProtKB%2FTrEMBL:Q0WIH9,Genbank:YP_002345909.1,GeneID:1173695;gbkey=CDS;product=sugar transport ATP-binding protein;protein_id=YP_002345909.1;transl_table=11
NC_003143.1	RefSeq	region	945197	945220	.	+	.	ID=id596;Note=PS00017 ATP%2FGTP-binding site motif A %28P-loop%29.;Dbxref=GeneID:1173695;gbkey=misc_feature
NC_003143.1	RefSeq	region	946274	946318	.	+	.	ID=id597;Note=PS00211 ABC transporters family signature.;Dbxref=GeneID:1173695;gbkey=misc_feature
NC_003143.1	RefSeq	gene	946633	947643	.	+	.	ID=gene820;Name=YPO0859;Dbxref=GeneID:1173696;gbkey=Gene;locus_tag=YPO0859
NC_003143.1	RefSeq	CDS	946633	947643	.	+	0	ID=cds791;Name=YP_002345910.1;Parent=gene820;Dbxref=InterPro:IPR001851,UniProtKB%2FTrEMBL:Q7CGV4,Genbank:YP_002345910.1,GeneID:1173696;gbkey=CDS;product=sugar transport system permease;protein_id=YP_002345910.1;transl_table=11
NC_003143.1	RefSeq	gene	948078	949079	.	+	.	ID=gene821;Name=YPO0860;Dbxref=GeneID:1173697;gbkey=Gene;locus_tag=YPO0860
NC_003143.1	RefSeq	CDS	948078	949079	.	+	0	ID=cds792;Name=YP_002345911.1;Parent=gene821;Dbxref=InterPro:IPR001761,UniProtKB%2FTrEMBL:Q0WIH7,Genbank:YP_002345911.1,GeneID:1173697;gbkey=CDS;product=sugar-binding protein;protein_id=YP_002345911.1;transl_table=11
NC_003143.1	RefSeq	gene	949858	950376	.	+	.	ID=gene822;Name=YPO0862;Dbxref=GeneID:1173698;gbkey=Gene;locus_tag=YPO0862
NC_003143.1	RefSeq	CDS	949858	950376	.	+	0	ID=cds793;Name=YP_002345912.1;Parent=gene822;Note=No significant database matches to the full length CDS;Dbxref=UniProtKB%2FTrEMBL:Q7CGV3,Genbank:YP_002345912.1,GeneID:1173698;gbkey=CDS;product=hypothetical protein;protein_id=YP_002345912.1;transl_table=11
NC_003143.1	RefSeq	gene	950752	951609	.	+	.	ID=gene823;Name=YPO0863;Dbxref=GeneID:1173699;gbkey=Gene;locus_tag=YPO0863
NC_003143.1	RefSeq	CDS	950752	951609	.	+	0	ID=cds794;Name=YP_002345913.1;Parent=gene823;Dbxref=UniProtKB%2FTrEMBL:Q7CGV2,Genbank:YP_002345913.1,GeneID:1173699;gbkey=CDS;product=hypothetical protein;protein_id=YP_002345913.1;transl_table=11
NC_003143.1	RefSeq	region	950779	950811	.	+	.	ID=id598;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site.;Dbxref=GeneID:1173699;gbkey=misc_feature
NC_003143.1	RefSeq	gene	952033	952713	.	+	.	ID=gene824;Name=YPO0864;Dbxref=GeneID:1173700;gbkey=Gene;locus_tag=YPO0864
NC_003143.1	RefSeq	CDS	952033	952713	.	+	0	ID=cds795;Name=YP_002345914.1;Parent=gene824;Dbxref=InterPro:IPR005149,UniProtKB%2FTrEMBL:Q7CGV1,Genbank:YP_002345914.1,GeneID:1173700;gbkey=CDS;product=hypothetical protein;protein_id=YP_002345914.1;transl_table=11
NC_003143.1	RefSeq	gene	952713	953033	.	+	.	ID=gene825;Name=YPO0865;Dbxref=GeneID:1173701;gbkey=Gene;locus_tag=YPO0865
NC_003143.1	RefSeq	CDS	952713	953033	.	+	0	ID=cds796;Name=YP_002345915.1;Parent=gene825;Note=no significant database hits;Dbxref=UniProtKB%2FTrEMBL:Q7CGV0,Genbank:YP_002345915.1,GeneID:1173701;gbkey=CDS;product=hypothetical protein;protein_id=YP_002345915.1;transl_table=11
NC_003143.1	RefSeq	gene	953116	953421	.	-	.	ID=gene826;Name=YPO0866;Dbxref=GeneID:1173702;gbkey=Gene;locus_tag=YPO0866
NC_003143.1	RefSeq	CDS	953116	953421	.	-	0	ID=cds797;Name=YP_002345916.1;Parent=gene826;Dbxref=InterPro:IPR008727,UniProtKB%2FTrEMBL:Q7CGU9,Genbank:YP_002345916.1,GeneID:1173702;gbkey=CDS;product=hypothetical protein;protein_id=YP_002345916.1;transl_table=11
NC_003143.1	RefSeq	gene	953638	954417	.	-	.	ID=gene827;Name=YPO0867;Dbxref=GeneID:1173703;gbkey=Gene;locus_tag=YPO0867
NC_003143.1	RefSeq	CDS	953638	954417	.	-	0	ID=cds798;Name=YP_002345917.1;Parent=gene827;Dbxref=UniProtKB%2FTrEMBL:Q7CGU8,Genbank:YP_002345917.1,GeneID:1173703;gbkey=CDS;product=hypothetical protein;protein_id=YP_002345917.1;transl_table=11
NC_003143.1	RefSeq	region	954624	954689	.	-	.	ID=id599;Note=1 probable transmembrane helix predicted;gbkey=misc_feature
NC_003143.1	RefSeq	gene	955022	955738	.	-	.	ID=gene828;Name=YPO0869;Dbxref=GeneID:1173705;gbkey=Gene;locus_tag=YPO0869
NC_003143.1	RefSeq	CDS	955022	955738	.	-	0	ID=cds799;Name=YP_002345919.1;Parent=gene828;Dbxref=UniProtKB%2FTrEMBL:Q0WIG9,Genbank:YP_002345919.1,GeneID:1173705;gbkey=CDS;product=hypothetical protein;protein_id=YP_002345919.1;transl_table=11
NC_003143.1	RefSeq	gene	955759	958083	.	-	.	ID=gene829;Name=YPO0870;Dbxref=GeneID:1173706;gbkey=Gene;locus_tag=YPO0870
NC_003143.1	RefSeq	CDS	955759	958083	.	-	0	ID=cds800;Name=YP_002345920.1;Parent=gene829;Dbxref=InterPro:IPR011990,UniProtKB%2FTrEMBL:Q7CGU7,Genbank:YP_002345920.1,GeneID:1173706;gbkey=CDS;product=hypothetical protein;protein_id=YP_002345920.1;transl_table=11
NC_003143.1	RefSeq	gene	958328	958612	.	-	.	ID=gene830;Name=YPO0871;Dbxref=GeneID:1173707;gbkey=Gene;locus_tag=YPO0871
NC_003143.1	RefSeq	CDS	958328	958612	.	-	0	ID=cds801;Name=YP_002345921.1;Parent=gene830;Dbxref=UniProtKB%2FTrEMBL:Q74QB8,Genbank:YP_002345921.1,GeneID:1173707;gbkey=CDS;product=colicin immunity protein;protein_id=YP_002345921.1;transl_table=11
NC_003143.1	RefSeq	gene	958659	958916	.	-	.	ID=gene831;Name=YPO0872;Dbxref=GeneID:1173708;gbkey=Gene;locus_tag=YPO0872
NC_003143.1	RefSeq	CDS	958659	958916	.	-	0	ID=cds802;Name=YP_002345922.1;Parent=gene831;Dbxref=UniProtKB%2FTrEMBL:Q74QB7,Genbank:YP_002345922.1,GeneID:1173708;gbkey=CDS;product=hypothetical protein;protein_id=YP_002345922.1;transl_table=11
NC_003143.1	RefSeq	gene	959426	960964	.	-	.	ID=gene832;Name=YPO0873;Dbxref=GeneID:1173709;gbkey=Gene;locus_tag=YPO0873
NC_003143.1	RefSeq	CDS	959426	960964	.	-	0	ID=cds803;Name=YP_002345923.1;Parent=gene832;Dbxref=InterPro:IPR008727,InterPro:IPR010715,UniProtKB%2FTrEMBL:Q7CGU6,Genbank:YP_002345923.1,GeneID:1173709;gbkey=CDS;product=hypothetical protein;protein_id=YP_002345923.1;transl_table=11
NC_003143.1	RefSeq	gene	961468	962610	.	-	.	ID=gene833;Name=YPO0874;Dbxref=GeneID:1173710;gbkey=Gene;locus_tag=YPO0874
NC_003143.1	RefSeq	CDS	961468	962610	.	-	0	ID=cds804;Name=YP_002345924.1;Parent=gene833;Dbxref=InterPro:IPR003812,UniProtKB%2FTrEMBL:Q7CGU5,Genbank:YP_002345924.1,GeneID:1173710;gbkey=CDS;product=hypothetical protein;protein_id=YP_002345924.1;transl_table=11
NC_003143.1	RefSeq	gene	962879	963244	.	+	.	ID=gene834;Name=YPO0875;Dbxref=GeneID:1173711;gbkey=Gene;locus_tag=YPO0875
NC_003143.1	RefSeq	CDS	962879	963244	.	+	0	ID=cds805;Name=YP_002345925.1;Parent=gene834;Dbxref=UniProtKB%2FTrEMBL:Q0WIG3,Genbank:YP_002345925.1,GeneID:1173711;gbkey=CDS;product=hypothetical protein;protein_id=YP_002345925.1;transl_table=11
NC_003143.1	RefSeq	gene	963257	963831	.	+	.	ID=gene835;Name=YPO0876;Dbxref=GeneID:1173712;gbkey=Gene;locus_tag=YPO0876;pseudo=true
NC_003143.1	RefSeq	gene	964013	964213	.	+	.	ID=gene836;Name=YPO0878;Dbxref=GeneID:1173714;gbkey=Gene;locus_tag=YPO0878
NC_003143.1	RefSeq	CDS	964013	964213	.	+	0	ID=cds806;Name=YP_002345928.1;Parent=gene836;Dbxref=InterPro:IPR009061,InterPro:IPR010260,UniProtKB%2FTrEMBL:Q7CGU2,Genbank:YP_002345928.1,GeneID:1173714;gbkey=CDS;product=regulatory protein;protein_id=YP_002345928.1;transl_table=11
NC_003143.1	RefSeq	region	964031	964096	.	+	.	ID=id600;Note=Predicted helix-turn-helix motif with score 1306 %28%2B3.64 SD%29 at aa 7-28%2C sequence IRLPEVLKRTGFSRPWVYKLLK;Dbxref=GeneID:1173714;gbkey=misc_feature
NC_003143.1	RefSeq	gene	964372	964698	.	-	.	ID=gene837;Name=YPO0879;Dbxref=GeneID:1173715;gbkey=Gene;locus_tag=YPO0879
NC_003143.1	RefSeq	CDS	964372	964698	.	-	0	ID=cds807;Name=YP_002345929.1;Parent=gene837;Dbxref=InterPro:IPR009241,UniProtKB%2FTrEMBL:Q0WIF9,Genbank:YP_002345929.1,GeneID:1173715;gbkey=CDS;product=hypothetical protein;protein_id=YP_002345929.1;transl_table=11
NC_003143.1	RefSeq	gene	964998	967289	.	+	.	ID=gene838;Name=YPO0880;Dbxref=GeneID:1173716;gbkey=Gene;locus_tag=YPO0880
NC_003143.1	RefSeq	CDS	964998	967289	.	+	0	ID=cds808;Name=YP_002345930.1;Parent=gene838;Dbxref=InterPro:IPR004968,InterPro:IPR006154,InterPro:IPR013237,InterPro:IPR014015,UniProtKB%2FTrEMBL:Q74QA8,Genbank:YP_002345930.1,GeneID:1173716;gbkey=CDS;product=primase;protein_id=YP_002345930.1;transl_table=11
NC_003143.1	RefSeq	region	966441	966464	.	+	.	ID=id601;Note=PS00017 ATP%2FGTP-binding site motif A %28P-loop%29.;Dbxref=GeneID:1173716;gbkey=misc_feature
NC_003143.1	RefSeq	gene	967689	968087	.	-	.	ID=gene839;Name=YPO0881;Dbxref=GeneID:1173717;gbkey=Gene;locus_tag=YPO0881
NC_003143.1	RefSeq	CDS	967689	968087	.	-	0	ID=cds809;Name=YP_002345931.1;Parent=gene839;Dbxref=InterPro:IPR001387,InterPro:IPR010982,UniProtKB%2FTrEMBL:Q7CGU1,Genbank:YP_002345931.1,GeneID:1173717;gbkey=CDS;product=hypothetical protein;protein_id=YP_002345931.1;transl_table=11
NC_003143.1	RefSeq	region	967773	967838	.	-	.	ID=id602;Note=Predicted helix-turn-helix motif with score 1346 %28%2B3.77 SD%29 at aa 84-105%2C sequence LNQREASEIFGGGVNAFSRYEK;Dbxref=GeneID:1173717;gbkey=misc_feature
NC_003143.1	RefSeq	gene	968087	968383	.	-	.	ID=gene840;Name=YPO0882;Dbxref=GeneID:1173718;gbkey=Gene;locus_tag=YPO0882
NC_003143.1	RefSeq	CDS	968087	968383	.	-	0	ID=cds810;Name=YP_002345932.1;Parent=gene840;Dbxref=UniProtKB%2FTrEMBL:Q74QA6,Genbank:YP_002345932.1,GeneID:1173718;gbkey=CDS;product=hypothetical protein;protein_id=YP_002345932.1;transl_table=11
NC_003143.1	RefSeq	gene	968547	968909	.	-	.	ID=gene841;Name=YPO0883;Dbxref=GeneID:1173719;gbkey=Gene;locus_tag=YPO0883
NC_003143.1	RefSeq	CDS	968547	968909	.	-	0	ID=cds811;Name=YP_002345933.1;Parent=gene841;Dbxref=InterPro:IPR001387,InterPro:IPR010982,UniProtKB%2FTrEMBL:Q74QA5,Genbank:YP_002345933.1,GeneID:1173719;gbkey=CDS;product=DNA binding protein;protein_id=YP_002345933.1;transl_table=11
NC_003143.1	RefSeq	region	968628	968693	.	-	.	ID=id603;Note=Predicted helix-turn-helix motif with score 2582 %28%2B7.98 SD%29 at aa 73-94%2C sequence FSQYEIAELLGTTQSAVSQWEA;Dbxref=GeneID:1173719;gbkey=misc_feature
NC_003143.1	RefSeq	gene	968972	969232	.	-	.	ID=gene842;Name=YPO0884;Dbxref=GeneID:1173720;gbkey=Gene;locus_tag=YPO0884
NC_003143.1	RefSeq	CDS	968972	969232	.	-	0	ID=cds812;Name=YP_002345934.1;Parent=gene842;Dbxref=InterPro:IPR007712,UniProtKB%2FTrEMBL:Q74QA4,Genbank:YP_002345934.1,GeneID:1173720;gbkey=CDS;product=hypothetical protein;protein_id=YP_002345934.1;transl_table=11
NC_003143.1	RefSeq	gene	970097	971311	.	-	.	ID=gene843;Name=int;Dbxref=GeneID:1173722;gbkey=Gene;gene=int;locus_tag=YPO0887
NC_003143.1	RefSeq	CDS	970097	971311	.	-	0	ID=cds813;Name=YP_002345935.1;Parent=gene843;Dbxref=InterPro:IPR002104,InterPro:IPR011010,InterPro:IPR013762,UniProtKB%2FTrEMBL:Q7CGU0,Genbank:YP_002345935.1,GeneID:1173722;gbkey=CDS;gene=int;product=integrase;protein_id=YP_002345935.1;transl_table=11
NC_003143.1	RefSeq	gene	971477	971550	.	-	.	ID=gene844;Name=YPt_06;Dbxref=GeneID:1173723;gbkey=Gene;locus_tag=YPt_06
NC_003143.1	RefSeq	tRNA	971477	971550	.	-	.	ID=rna10;Parent=gene844;Note=tRNA Gly anticodon CCC%2C Cove score 78.87;Dbxref=GeneID:1173723;gbkey=tRNA;product=tRNA-Gly
NC_003143.1	RefSeq	exon	971477	971550	.	-	.	ID=id604;Parent=rna10;Note=tRNA Gly anticodon CCC%2C Cove score 78.87;Dbxref=GeneID:1173723;gbkey=tRNA;product=tRNA-Gly
NC_003143.1	RefSeq	gene	971744	973261	.	-	.	ID=gene845;Name=lysS;Dbxref=GeneID:1173724;gbkey=Gene;gene=lysS;gene_synonym=herC,lysS;locus_tag=YPO0888
NC_003143.1	RefSeq	CDS	971744	973261	.	-	0	ID=cds814;Name=YP_002345936.1;Parent=gene845;Note=class II%3B LysRS2%3B catalyzes a two-step reaction%2C first charging a lysine molecule by linking its carboxyl group to the alpha-phosphate of ATP%2C followed by transfer of the aminoacyl-adenylate to its tRNA%3B in Methanosarcina barkeri%2C LysRS2 charges both tRNA molecules for lysine that exist in this organism and in addition can charge the tRNAPyl with lysine in the presence of LysRS1;Dbxref=InterPro:IPR002313,InterPro:IPR004364,InterPro:IPR004365,InterPro:IPR006195,InterPro:IPR008994,InterPro:IPR012340,UniProtKB%2FTrEMBL:Q0WIF2,Genbank:YP_002345936.1,GeneID:1173724;gbkey=CDS;gene=lysS;product=lysyl-tRNA synthetase;protein_id=YP_002345936.1;transl_table=11
NC_003143.1	RefSeq	region	971807	971836	.	-	.	ID=id605;Note=PS00339 Aminoacyl-transfer RNA synthetases class-II signature 2.;Dbxref=GeneID:1173724;gbkey=misc_feature;gene=lysS
NC_003143.1	RefSeq	region	972425	972478	.	-	.	ID=id606;Note=PS00179 Aminoacyl-transfer RNA synthetases class-II signature 1.;Dbxref=GeneID:1173724;gbkey=misc_feature;gene=lysS
NC_003143.1	RefSeq	gene	973271	974369	.	-	.	ID=gene846;Name=prfB;Dbxref=GeneID:1173725;gbkey=Gene;gene=prfB;gene_synonym=supK;locus_tag=YPO0889
NC_003143.1	RefSeq	CDS	974295	974369	.	-	0	ID=cds815;Name=YP_002345937.1;Parent=gene846;Note=recognizes the termination signals UGA and UAA during protein translation a specificity which is dependent on amino acid residues residing in loops of the L-shaped tRNA-like molecule of RF2%3B in some organisms control of PrfB protein levels is maintained through a %2B1 ribosomal frameshifting mechanism%3B this protein is similar to release factor 1;Dbxref=InterPro:IPR000352,InterPro:IPR004374,InterPro:IPR005139,InterPro:IPR012086,UniProtKB%2FTrEMBL:Q0WIF1,Genbank:YP_002345937.1,GeneID:1173725;exception=ribosomal slippage;gbkey=CDS;gene=prfB;product=peptide chain release factor 2;protein_id=YP_002345937.1;transl_table=11
NC_003143.1	RefSeq	CDS	973271	974293	.	-	0	ID=cds815;Name=YP_002345937.1;Parent=gene846;Note=recognizes the termination signals UGA and UAA during protein translation a specificity which is dependent on amino acid residues residing in loops of the L-shaped tRNA-like molecule of RF2%3B in some organisms control of PrfB protein levels is maintained through a %2B1 ribosomal frameshifting mechanism%3B this protein is similar to release factor 1;Dbxref=InterPro:IPR000352,InterPro:IPR004374,InterPro:IPR005139,InterPro:IPR012086,UniProtKB%2FTrEMBL:Q0WIF1,Genbank:YP_002345937.1,GeneID:1173725;exception=ribosomal slippage;gbkey=CDS;gene=prfB;product=peptide chain release factor 2;protein_id=YP_002345937.1;transl_table=11
NC_003143.1	RefSeq	region	973586	973636	.	-	.	ID=id607;Note=PS00745 Prokaryotic-type class I peptide chain release factors signature.;Dbxref=GeneID:1173725;gbkey=misc_feature;gene=prfB
NC_003143.1	RefSeq	gene	974548	976281	.	-	.	ID=gene847;Name=recJ;Dbxref=GeneID:1173726;gbkey=Gene;gene=recJ;locus_tag=YPO0890
NC_003143.1	RefSeq	CDS	974548	976281	.	-	0	ID=cds816;Name=YP_002345938.1;Parent=gene847;Note=5%27-3%27 single-stranded-DNA-specific exonuclease;Dbxref=InterPro:IPR001667,InterPro:IPR003156,InterPro:IPR004610,UniProtKB%2FTrEMBL:Q7CGT9,Genbank:YP_002345938.1,GeneID:1173726;gbkey=CDS;gene=recJ;product=ssDNA exonuclease RecJ;protein_id=YP_002345938.1;transl_table=11
NC_003143.1	RefSeq	gene	976288	977004	.	-	.	ID=gene848;Name=dsbC;Dbxref=GeneID:1173727;gbkey=Gene;gene=dsbC;locus_tag=YPO0891
NC_003143.1	RefSeq	CDS	976288	977004	.	-	0	ID=cds817;Name=YP_002345939.1;Parent=gene848;Note=DsbC%3B periplasmic protein with protein disulfide isomerase activity%3B this protein also shows disulfide oxidoreductase activity;Dbxref=InterPro:IPR006662,InterPro:IPR009094,InterPro:IPR012335,InterPro:IPR012336,UniProtKB%2FTrEMBL:Q7CGT8,Genbank:YP_002345939.1,GeneID:1173727;gbkey=CDS;gene=dsbC;product=thiol:disulfide interchange protein DsbC;protein_id=YP_002345939.1;transl_table=11
NC_003143.1	RefSeq	region	976618	976674	.	-	.	ID=id608;Note=PS00194 Thioredoxin family active site.;Dbxref=GeneID:1173727;gbkey=misc_feature;gene=dsbC
NC_003143.1	RefSeq	gene	977035	977934	.	-	.	ID=gene849;Name=xerD;Dbxref=GeneID:1173728;gbkey=Gene;gene=xerD;locus_tag=YPO0892
NC_003143.1	RefSeq	CDS	977035	977934	.	-	0	ID=cds818;Name=YP_002345940.1;Parent=gene849;Note=site-specific tyrosine recombinase which cuts and rejoins DNA molecules%3B binds cooperatively to specific DNA consensus sites%3B forms a heterotetrameric complex with XerC%3B XerCD exhibit similar sequences%3B essential to convert chromosome dimers to monomers during cell division and functions during plasmid segregation%3B XerD specifically exchanges the bottom strands%3B cell division protein FtsK may regulate the XerCD complex%3B enzyme from Streptococcus group has unusual active site motifs;Dbxref=InterPro:IPR002104,InterPro:IPR004107,InterPro:IPR010998,InterPro:IPR011010,InterPro:IPR011932,InterPro:IPR013762,UniProtKB%2FTrEMBL:Q0WIE8,Genbank:YP_002345940.1,GeneID:1173728;gbkey=CDS;gene=xerD;product=site-specific tyrosine recombinase XerD;protein_id=YP_002345940.1;transl_table=11
NC_003143.1	RefSeq	gene	978041	978559	.	+	.	ID=gene850;Name=fldB;Dbxref=GeneID:1173729;gbkey=Gene;gene=fldB;locus_tag=YPO0893
NC_003143.1	RefSeq	CDS	978041	978559	.	+	0	ID=cds819;Name=YP_002345941.1;Parent=gene850;Note=An electron-transfer protein%3B flavodoxin binds one FMN molecule%2C which serves as a redox-active prosthetic;Dbxref=InterPro:IPR001226,InterPro:IPR008254,InterPro:IPR010086,UniProtKB%2FTrEMBL:Q0WIE7,Genbank:YP_002345941.1,GeneID:1173729;gbkey=CDS;gene=fldB;product=flavodoxin FldB;protein_id=YP_002345941.1;transl_table=11
NC_003143.1	RefSeq	region	978053	978103	.	+	.	ID=id609;Note=PS00201 Flavodoxin signature.;Dbxref=GeneID:1173729;gbkey=misc_feature;gene=fldB
NC_003143.1	RefSeq	gene	978649	980127	.	-	.	ID=gene851;Name=creD;Dbxref=GeneID:1173730;gbkey=Gene;gene=creD;locus_tag=YPO0894
NC_003143.1	RefSeq	CDS	978649	980127	.	-	0	ID=cds820;Name=YP_002345942.1;Parent=gene851;Dbxref=InterPro:IPR010364,UniProtKB%2FTrEMBL:Q74Q99,Genbank:YP_002345942.1,GeneID:1173730;gbkey=CDS;gene=creD;product=hypothetical protein;protein_id=YP_002345942.1;transl_table=11
NC_003143.1	RefSeq	gene	980227	981645	.	-	.	ID=gene852;Name=creC;Dbxref=GeneID:1173731;gbkey=Gene;gene=creC;gene_synonym=phoM,sasS;locus_tag=YPO0895
NC_003143.1	RefSeq	CDS	980227	981645	.	-	0	ID=cds821;Name=YP_002345943.1;Parent=gene852;Note=part of a two-component regulatory system with CreB or PhoB%3B involved in catabolic regulation;Dbxref=InterPro:IPR003594,InterPro:IPR003660,InterPro:IPR003661,InterPro:IPR004358,InterPro:IPR005467,InterPro:IPR009082,UniProtKB%2FTrEMBL:Q7CGT7,Genbank:YP_002345943.1,GeneID:1173731;gbkey=CDS;gene=creC;product=sensory histidine kinase CreC;protein_id=YP_002345943.1;transl_table=11
NC_003143.1	RefSeq	gene	981670	982371	.	-	.	ID=gene853;Name=creB;Dbxref=GeneID:1173732;gbkey=Gene;gene=creB;locus_tag=YPO0896
NC_003143.1	RefSeq	CDS	981670	982371	.	-	0	ID=cds822;Name=YP_002345944.1;Parent=gene853;Note=response regulator in two-component regulatory system with CreC%3B CreB protein is phosphorylated by sensor protein phospho-CreC%3B involved in catabolic regulation;Dbxref=InterPro:IPR001789,InterPro:IPR001867,InterPro:IPR011006,InterPro:IPR011991,UniProtKB%2FTrEMBL:Q7CGT6,Genbank:YP_002345944.1,GeneID:1173732;gbkey=CDS;gene=creB;product=DNA-binding response regulator CreB;protein_id=YP_002345944.1;transl_table=11
NC_003143.1	RefSeq	gene	982368	982793	.	-	.	ID=gene854;Name=creB;Dbxref=GeneID:1173733;gbkey=Gene;gene=creB;locus_tag=YPO0896a
NC_003143.1	RefSeq	CDS	982368	982793	.	-	0	ID=cds823;Name=YP_002345945.1;Parent=gene854;Dbxref=InterPro:IPR009883,UniProtKB%2FTrEMBL:Q7CGT5,Genbank:YP_002345945.1,GeneID:1173733;gbkey=CDS;product=hypothetical protein;protein_id=YP_002345945.1;transl_table=11
NC_003143.1	RefSeq	gene	982774	983040	.	-	.	ID=gene855;Name=YPO0897;Dbxref=GeneID:1173734;gbkey=Gene;locus_tag=YPO0897
NC_003143.1	RefSeq	CDS	982774	983040	.	-	0	ID=cds824;Name=YP_002345946.1;Parent=gene855;Dbxref=InterPro:IPR005631,UniProtKB%2FTrEMBL:Q0WIE2,Genbank:YP_002345946.1,GeneID:1173734;gbkey=CDS;product=hypothetical protein;protein_id=YP_002345946.1;transl_table=11
NC_003143.1	RefSeq	gene	983357	984349	.	+	.	ID=gene856;Name=YPO0898;Dbxref=GeneID:1173735;gbkey=Gene;locus_tag=YPO0898
NC_003143.1	RefSeq	CDS	983357	984349	.	+	0	ID=cds825;Name=YP_002345947.1;Parent=gene856;Note=physiological role is not clear%3B not essential for growth but mutants grow poorly%3B mutations suppress hda null mutations%3B may be involved in regulation of ATP-DnaA levels%3B may also be involved in regulation of tRNA modifications%3B can bind folic acid and tetrahydrofolate%3B forms a three domain ring-like structure with a central channel%3B structurally similar to DMGO protein from A. globiformis%3B shows sequence similarity to yeast CAF17 transcriptional regulator;Dbxref=UniProtKB%2FTrEMBL:Q7CGT3,Genbank:YP_002345947.1,GeneID:1173735;gbkey=CDS;product=global regulator;protein_id=YP_002345947.1;transl_table=11
NC_003143.1	RefSeq	gene	984422	984919	.	-	.	ID=gene857;Name=YPO0899;Dbxref=GeneID:1173736;gbkey=Gene;locus_tag=YPO0899
NC_003143.1	RefSeq	CDS	984422	984919	.	-	0	ID=cds826;Name=YP_002345948.1;Parent=gene857;Dbxref=UniProtKB%2FTrEMBL:Q0WIE0,Genbank:YP_002345948.1,GeneID:1173736;gbkey=CDS;product=hypothetical protein;protein_id=YP_002345948.1;transl_table=11
NC_003143.1	RefSeq	gene	985177	985878	.	-	.	ID=gene858;Name=YPO0900;Dbxref=GeneID:1173737;gbkey=Gene;locus_tag=YPO0900
NC_003143.1	RefSeq	CDS	985177	985878	.	-	0	ID=cds827;Name=YP_002345949.1;Parent=gene858;Dbxref=InterPro:IPR004254,InterPro:IPR005744,UniProtKB%2FTrEMBL:Q7CGT2,Genbank:YP_002345949.1,GeneID:1173737;gbkey=CDS;product=hemolysin III;protein_id=YP_002345949.1;transl_table=11
NC_003143.1	RefSeq	gene	986080	987225	.	-	.	ID=gene859;Name=YPO0901;Dbxref=GeneID:1173738;gbkey=Gene;locus_tag=YPO0901
NC_003143.1	RefSeq	CDS	986080	987225	.	-	0	ID=cds828;Name=YP_002345950.1;Parent=gene859;Note=No significant database matches. Similar to YPO1686 %2861.0%25 identity in 354 aa overlap%29.;Dbxref=UniProtKB%2FTrEMBL:Q74Q91,Genbank:YP_002345950.1,GeneID:1173738;gbkey=CDS;product=hypothetical protein;protein_id=YP_002345950.1;transl_table=11
NC_003143.1	RefSeq	gene	987287	989412	.	-	.	ID=gene860;Name=YPO0901a;Dbxref=GeneID:17699568;gbkey=Gene;locus_tag=YPO0901a;pseudo=true
NC_003143.1	RefSeq	region	989263	990406	.	+	.	ID=id610;Note=DNA has a low GC content%2C 29.89%25%2C possible laterally acquired DNA.;gbkey=misc_feature
NC_003143.1	RefSeq	gene	990473	990910	.	-	.	ID=gene861;Name=YPO0904;Dbxref=GeneID:1173740;gbkey=Gene;locus_tag=YPO0904
NC_003143.1	RefSeq	CDS	990473	990910	.	-	0	ID=cds829;Name=YP_002345952.1;Parent=gene861;Note=no significant database hits;Dbxref=UniProtKB%2FTrEMBL:Q7CGT1,Genbank:YP_002345952.1,GeneID:1173740;gbkey=CDS;product=hypothetical protein;protein_id=YP_002345952.1;transl_table=11
NC_003143.1	RefSeq	gene	991288	994167	.	-	.	ID=gene862;Name=gcvP;Dbxref=GeneID:1173741;gbkey=Gene;gene=gcvP;locus_tag=YPO0905
NC_003143.1	RefSeq	CDS	991288	994167	.	-	0	ID=cds830;Name=YP_002345953.1;Parent=gene862;Note=acts in conjunction with GvcH to form H-protein-S-aminomethyldihydrolipoyllysine from glycine;Dbxref=InterPro:IPR003437,UniProtKB%2FTrEMBL:Q0WID5,Genbank:YP_002345953.1,GeneID:1173741;gbkey=CDS;gene=gcvP;product=glycine dehydrogenase;protein_id=YP_002345953.1;transl_table=11
NC_003143.1	RefSeq	gene	994379	994765	.	-	.	ID=gene863;Name=gcsH;Dbxref=GeneID:1173742;gbkey=Gene;gene=gcsH;locus_tag=YPO0906
NC_003143.1	RefSeq	CDS	994379	994765	.	-	0	ID=cds831;Name=YP_002345954.1;Parent=gene863;Note=part of multienzyme complex composed of H%2C L%2C P%2C and T proteins which catalyzes oxidation of glycine to yield carbon dioxide%2C ammonia%2C 5%2C10-CH2-H4folate and a reduced pyridine nucleotide%3B protein H is involved in transfer of methylamine group from the P to T protein%3B covalently bound to a lipoyl cofactor;Dbxref=InterPro:IPR002930,InterPro:IPR003016,InterPro:IPR011053,UniProtKB%2FTrEMBL:Q0WID4,Genbank:YP_002345954.1,GeneID:1173742;gbkey=CDS;gene=gcsH;product=glycine cleavage system protein H;protein_id=YP_002345954.1;transl_table=11
NC_003143.1	RefSeq	region	994532	994621	.	-	.	ID=id611;Note=PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site.;Dbxref=GeneID:1173742;gbkey=misc_feature;gene=gcsH
NC_003143.1	RefSeq	gene	994834	995931	.	-	.	ID=gene864;Name=gcvT;Dbxref=GeneID:1173743;gbkey=Gene;gene=gcvT;locus_tag=YPO0907
NC_003143.1	RefSeq	CDS	994834	995931	.	-	0	ID=cds832;Name=YP_002345955.1;Parent=gene864;Note=catalyzes the transfer of a methylene carbon from the methylamine-loaded GcvH protein to tetrahydrofolate%2C causing the release of ammonia and the generation of reduced GcvH protein;Dbxref=InterPro:IPR006222,InterPro:IPR006223,InterPro:IPR013977,UniProtKB%2FTrEMBL:Q0WID3,Genbank:YP_002345955.1,GeneID:1173743;gbkey=CDS;gene=gcvT;product=glycine cleavage system aminomethyltransferase T;protein_id=YP_002345955.1;transl_table=11
NC_003143.1	RefSeq	gene	996652	997872	.	-	.	ID=gene865;Name=visC;Dbxref=GeneID:1173744;gbkey=Gene;gene=visC;locus_tag=YPO0908
NC_003143.1	RefSeq	CDS	996652	997872	.	-	0	ID=cds833;Name=YP_002345956.1;Parent=gene865;Dbxref=InterPro:IPR003042,InterPro:IPR008671,InterPro:IPR010971,UniProtKB%2FTrEMBL:Q0WID2,Genbank:YP_002345956.1,GeneID:1173744;gbkey=CDS;gene=visC;product=hypothetical protein;protein_id=YP_002345956.1;transl_table=11
NC_003143.1	RefSeq	region	996940	996981	.	-	.	ID=id612;Note=PS01304 ubiH%2FCOQ6 monooxygenase family signature.;Dbxref=GeneID:1173744;gbkey=misc_feature;gene=visC
NC_003143.1	RefSeq	region	997213	997245	.	-	.	ID=id613;Note=PS00133 Zinc carboxypeptidases%2C zinc-binding region 2 signature.;Dbxref=GeneID:1173744;gbkey=misc_feature;gene=visC
NC_003143.1	RefSeq	gene	998045	999223	.	-	.	ID=gene866;Name=ubiH;Dbxref=GeneID:1173745;gbkey=Gene;gene=ubiH;locus_tag=YPO0909
NC_003143.1	RefSeq	CDS	998045	999223	.	-	0	ID=cds834;Name=YP_002345957.1;Parent=gene866;Note=Oxygenase that introduces the hydroxyl group at carbon four of 2-octaprenyl-6-methoxyphenol resulting in the formation of 2-octaprenyl-6-methoxy-1%2C4-benzoquinone;Dbxref=InterPro:IPR003042,InterPro:IPR006076,InterPro:IPR010971,InterPro:IPR011295,UniProtKB%2FTrEMBL:Q7CGT0,Genbank:YP_002345957.1,GeneID:1173745;gbkey=CDS;gene=ubiH;product=2-octaprenyl-6-methoxyphenyl hydroxylase;protein_id=YP_002345957.1;transl_table=11
NC_003143.1	RefSeq	region	998309	998350	.	-	.	ID=id614;Note=PS01304 ubiH%2FCOQ6 monooxygenase family signature.;Dbxref=GeneID:1173745;gbkey=misc_feature;gene=ubiH
NC_003143.1	RefSeq	gene	999292	1000605	.	-	.	ID=gene867;Name=pepP;Dbxref=GeneID:1173746;gbkey=Gene;gene=pepP;locus_tag=YPO0910
NC_003143.1	RefSeq	CDS	999292	1000605	.	-	0	ID=cds835;Name=YP_002345958.1;Parent=gene867;Note=exopeptidase able to cleave the peptide bond of the last amino acid if linked to a proline residue%3B substrate can be as short as a dipeptide;Dbxref=InterPro:IPR000994,InterPro:IPR001131,InterPro:IPR001714,InterPro:IPR007865,UniProtKB%2FTrEMBL:Q7CGS9,Genbank:YP_002345958.1,GeneID:1173746;gbkey=CDS;gene=pepP;product=proline aminopeptidase P II;protein_id=YP_002345958.1;transl_table=11
NC_003143.1	RefSeq	region	999526	999564	.	-	.	ID=id615;Note=PS00491 Aminopeptidase P and proline dipeptidase signature.;Dbxref=GeneID:1173746;gbkey=misc_feature;gene=pepP
NC_003143.1	RefSeq	gene	1000693	1001271	.	-	.	ID=gene868;Name=YPO0911;Dbxref=GeneID:1173747;gbkey=Gene;locus_tag=YPO0911
NC_003143.1	RefSeq	CDS	1000693	1001271	.	-	0	ID=cds836;Name=YP_002345959.1;Parent=gene868;Note=the crystal structure of Haemophilus influenzae HI0817 showed that this protein forms dimers%3B function unknown;Dbxref=InterPro:IPR005356,InterPro:IPR011978,UniProtKB%2FTrEMBL:Q0WIC9,Genbank:YP_002345959.1,GeneID:1173747;gbkey=CDS;product=hypothetical protein;protein_id=YP_002345959.1;transl_table=11
NC_003143.1	RefSeq	gene	1001608	1001937	.	+	.	ID=gene869;Name=YPO0912;Dbxref=GeneID:1173748;gbkey=Gene;locus_tag=YPO0912
NC_003143.1	RefSeq	CDS	1001608	1001937	.	+	0	ID=cds837;Name=YP_002345960.1;Parent=gene869;Dbxref=InterPro:IPR007838,UniProtKB%2FTrEMBL:Q0WIC8,Genbank:YP_002345960.1,GeneID:1173748;gbkey=CDS;product=Z-ring-associated protein;protein_id=YP_002345960.1;transl_table=11
NC_003143.1	RefSeq	gene	1001993	1002174	.	+	.	ID=gene870;Name=ssrS;Dbxref=GeneID:1173749;gbkey=Gene;gene=ssrS;locus_tag=YPOs02
NC_003143.1	RefSeq	ncRNA	1001993	1002174	.	+	.	ID=rna11;Parent=gene870;Note=Similar to Escherichia coli 6S RNA%2C ssrS%2C 86%25 identity in 159 overlap;Dbxref=GeneID:1173749;gbkey=ncRNA;gene=ssrS;ncrna_class=other;product=6S RNA
NC_003143.1	RefSeq	exon	1001993	1002174	.	+	.	ID=id616;Parent=rna11;Note=Similar to Escherichia coli 6S RNA%2C ssrS%2C 86%25 identity in 159 overlap;Dbxref=GeneID:1173749;gbkey=ncRNA;gene=ssrS;ncrna_class=other;product=6S RNA
NC_003143.1	RefSeq	gene	1002301	1002897	.	+	.	ID=gene871;Name=YPO0913;Dbxref=GeneID:1173750;gbkey=Gene;locus_tag=YPO0913
NC_003143.1	RefSeq	CDS	1002301	1002897	.	+	0	ID=cds838;Name=YP_002345961.1;Parent=gene871;Dbxref=InterPro:IPR002698,UniProtKB%2FTrEMBL:Q7CGS8,Genbank:YP_002345961.1,GeneID:1173750;gbkey=CDS;product=5-formyltetrahydrofolate cyclo-ligase;protein_id=YP_002345961.1;transl_table=11
NC_003143.1	RefSeq	gene	1003162	1004403	.	-	.	ID=gene872;Name=serA;Dbxref=GeneID:1173751;gbkey=Gene;gene=serA;locus_tag=YPO0914
NC_003143.1	RefSeq	CDS	1003162	1004403	.	-	0	ID=cds839;Name=YP_002345962.1;Parent=gene872;Note=catalyzes the formation of 3-phosphonooxypyruvate from 3-phospho-D-glycerate in serine biosynthesis%3B can also reduce alpha ketoglutarate to form 2-hydroxyglutarate;Dbxref=InterPro:IPR002912,InterPro:IPR006139,InterPro:IPR006140,Genbank:YP_002345962.1,GeneID:1173751;gbkey=CDS;gene=serA;product=D-3-phosphoglycerate dehydrogenase;protein_id=YP_002345962.1;transl_table=11
NC_003143.1	RefSeq	region	1003669	1003719	.	-	.	ID=id617;Note=PS00671 D-isomer specific 2-hydroxyacid dehydrogenases signature 3.;Dbxref=GeneID:1173751;gbkey=misc_feature;gene=serA
NC_003143.1	RefSeq	region	1003738	1003806	.	-	.	ID=id618;Note=PS00670 D-isomer specific 2-hydroxyacid dehydrogenases signature 2.;Dbxref=GeneID:1173751;gbkey=misc_feature;gene=serA
NC_003143.1	RefSeq	region	1003861	1003944	.	-	.	ID=id619;Note=PS00065 D-isomer specific 2-hydroxyacid dehydrogenases NAD-binding signature.;Dbxref=GeneID:1173751;gbkey=misc_feature;gene=serA
NC_003143.1	RefSeq	gene	1004710	1005366	.	-	.	ID=gene873;Name=rpiA;Dbxref=GeneID:1173752;gbkey=Gene;gene=rpiA;locus_tag=YPO0915
NC_003143.1	RefSeq	CDS	1004710	1005366	.	-	0	ID=cds840;Name=YP_002345963.1;Parent=gene873;Note=Catalyzes D-ribose 5-phosphate --%3E D-ribulose 5-phosphate in the nonoxidative branch of the pentose phosphate pathway;Dbxref=InterPro:IPR004788,UniProtKB%2FTrEMBL:Q0WIC5,Genbank:YP_002345963.1,GeneID:1173752;gbkey=CDS;gene=rpiA;product=ribose-5-phosphate isomerase A;protein_id=YP_002345963.1;transl_table=11
NC_003143.1	RefSeq	gene	1005708	1006616	.	+	.	ID=gene874;Name=iciA;Dbxref=GeneID:1173753;gbkey=Gene;gene=iciA;locus_tag=YPO0916
NC_003143.1	RefSeq	CDS	1005708	1006616	.	+	0	ID=cds841;Name=YP_002345964.1;Parent=gene874;Note=specific inhibitor of chromosomal initiation of replication in vitro%3B binds the three 13-mers in the origin %28oriC%29 to block initiation of replication%3B also controls genes involved in arginine transport;Dbxref=InterPro:IPR000847,InterPro:IPR005119,InterPro:IPR011991,UniProtKB%2FTrEMBL:Q0WIC4,Genbank:YP_002345964.1,GeneID:1173753;gbkey=CDS;gene=iciA;product=chromosome replication initiation inhibitor protein;protein_id=YP_002345964.1;transl_table=11
NC_003143.1	RefSeq	region	1005762	1005827	.	+	.	ID=id620;Note=Predicted helix-turn-helix motif with score 1987 %28%2B5.95 SD%29 at aa 35-56%2C sequence RGFERAAQKLCITQSAVSQRIK;Dbxref=GeneID:1173753;gbkey=misc_feature;gene=iciA
NC_003143.1	RefSeq	region	1005765	1005857	.	+	.	ID=id621;Note=PS00044 Bacterial regulatory proteins%2C lysR family signature.;Dbxref=GeneID:1173753;gbkey=misc_feature;gene=iciA
NC_003143.1	RefSeq	gene	1006627	1007406	.	-	.	ID=gene875;Name=yggE;Dbxref=GeneID:1173754;gbkey=Gene;gene=yggE;locus_tag=YPO0917
NC_003143.1	RefSeq	CDS	1006627	1007406	.	-	0	ID=cds842;Name=YP_002345965.1;Parent=gene875;Dbxref=InterPro:IPR007497,UniProtKB%2FTrEMBL:Q0WIC3,Genbank:YP_002345965.1,GeneID:1173754;gbkey=CDS;gene=yggE;product=hypothetical protein;protein_id=YP_002345965.1;transl_table=11
NC_003143.1	RefSeq	gene	1007596	1008213	.	-	.	ID=gene876;Name=yggA;Dbxref=GeneID:1173755;gbkey=Gene;gene=yggA;locus_tag=YPO0918
NC_003143.1	RefSeq	CDS	1007596	1008213	.	-	0	ID=cds843;Name=YP_002345966.1;Parent=gene876;Note=Involved in the export of arginine;Dbxref=InterPro:IPR001123,InterPro:IPR004777,UniProtKB%2FTrEMBL:Q0WIC2,Genbank:YP_002345966.1,GeneID:1173755;gbkey=CDS;gene=yggA;product=arginine exporter protein;protein_id=YP_002345966.1;transl_table=11
NC_003143.1	RefSeq	gene	1008476	1009345	.	-	.	ID=gene877;Name=YPO0919;Dbxref=GeneID:1173756;gbkey=Gene;locus_tag=YPO0919
NC_003143.1	RefSeq	CDS	1008476	1009345	.	-	0	ID=cds844;Name=YP_002345967.1;Parent=gene877;Dbxref=InterPro:IPR006685,InterPro:IPR006686,InterPro:IPR008910,InterPro:IPR010920,InterPro:IPR011014,InterPro:IPR011066,UniProtKB%2FTrEMBL:Q7CGS6,Genbank:YP_002345967.1,GeneID:1173756;gbkey=CDS;product=hypothetical protein;protein_id=YP_002345967.1;transl_table=11
NC_003143.1	RefSeq	region	1008815	1008919	.	-	.	ID=id622;Note=PS01246 Uncharacterized protein family UPF0003 signature.;Dbxref=GeneID:1173756;gbkey=misc_feature
NC_003143.1	RefSeq	gene	1009783	1010862	.	-	.	ID=gene878;Name=fbaA;Dbxref=GeneID:1173757;gbkey=Gene;gene=fbaA;gene_synonym=fda;locus_tag=YPO0920
NC_003143.1	RefSeq	CDS	1009783	1010862	.	-	0	ID=cds845;Name=YP_002345968.1;Parent=gene878;Note=catalyzes the formation of glycerone phosphate and glyceraldehyde 3-phosphate from fructose 1%2C6%2C bisphosphate;Dbxref=InterPro:IPR000771,InterPro:IPR006411,UniProtKB%2FTrEMBL:Q7CGS5,Genbank:YP_002345968.1,GeneID:1173757;gbkey=CDS;gene=fbaA;product=fructose-bisphosphate aldolase;protein_id=YP_002345968.1;transl_table=11
NC_003143.1	RefSeq	region	1010314	1010349	.	-	.	ID=id623;Note=PS00806 Fructose-bisphosphate aldolase class-II signature 2.;Dbxref=GeneID:1173757;gbkey=misc_feature;gene=fbaA
NC_003143.1	RefSeq	region	1010527	1010562	.	-	.	ID=id624;Note=PS00602 Fructose-bisphosphate aldolase class-II signature 1.;Dbxref=GeneID:1173757;gbkey=misc_feature;gene=fbaA
NC_003143.1	RefSeq	gene	1010982	1012145	.	-	.	ID=gene879;Name=pgk;Dbxref=GeneID:1173758;gbkey=Gene;gene=pgk;locus_tag=YPO0921
NC_003143.1	RefSeq	CDS	1010982	1012145	.	-	0	ID=cds846;Name=YP_002345969.1;Parent=gene879;Note=Converts 3-phospho-D-glycerate to 3-phospho-D-glyceroyl phosphate during the glycolysis pathway;Dbxref=InterPro:IPR001576,UniProtKB%2FTrEMBL:Q0WIB9,Genbank:YP_002345969.1,GeneID:1173758;gbkey=CDS;gene=pgk;product=phosphoglycerate kinase;protein_id=YP_002345969.1;transl_table=11
NC_003143.1	RefSeq	region	1012071	1012103	.	-	.	ID=id625;Note=PS00111 Phosphoglycerate kinase signature.;Dbxref=GeneID:1173758;gbkey=misc_feature;gene=pgk
NC_003143.1	RefSeq	gene	1012248	1013264	.	-	.	ID=gene880;Name=epd;Dbxref=GeneID:1173759;gbkey=Gene;gene=epd;gene_synonym=gapB;locus_tag=YPO0922
NC_003143.1	RefSeq	CDS	1012248	1013264	.	-	0	ID=cds847;Name=YP_002345970.1;Parent=gene880;Note=NAD-dependent%3B catalyzes the formation of 4-phosphoerythronate from erythrose 4-phosphate in the biosynthesis of pyridoxine 5%27-phosphate;Dbxref=InterPro:IPR000173,InterPro:IPR000318,InterPro:IPR006422,UniProtKB%2FTrEMBL:Q7CGS4,Genbank:YP_002345970.1,GeneID:1173759;gbkey=CDS;gene=epd;product=erythrose 4-phosphate dehydrogenase;protein_id=YP_002345970.1;transl_table=11
NC_003143.1	RefSeq	region	1012785	1012808	.	-	.	ID=id626;Note=PS00071 Glyceraldehyde 3-phosphate dehydrogenase active site.;Dbxref=GeneID:1173759;gbkey=misc_feature;gene=epd
NC_003143.1	RefSeq	region	1013034	1013078	.	-	.	ID=id627;Note=PS00090 Nitrogenases component 1 alpha and beta subunits signature 2.;Dbxref=GeneID:1173759;gbkey=misc_feature;gene=epd
NC_003143.1	RefSeq	repeat_region	1013513	1015466	.	-	.	ID=id628;Note=insertion sequence:IS100;gbkey=repeat_region
NC_003143.1	RefSeq	repeat_region	1013513	1013540	.	+	.	ID=id629;Note=IS100 inverted repeat;gbkey=repeat_region
NC_003143.1	RefSeq	gene	1013579	1014361	.	-	.	ID=gene881;Name=YPO0923;Note=ypmt1.57c;Dbxref=GeneID:1173760;gbkey=Gene;locus_tag=YPO0923
NC_003143.1	RefSeq	CDS	1013579	1014361	.	-	0	ID=cds848;Name=YP_002345971.1;Parent=gene881;Dbxref=InterPro:IPR001270,InterPro:IPR002611,InterPro:IPR003593,UniProtKB%2FTrEMBL:Q7ARK4,Genbank:YP_002345971.1,GeneID:1173760;gbkey=CDS;product=transposase%2FIS protein;protein_id=YP_002345971.1;transl_table=11
NC_003143.1	RefSeq	region	1014011	1014034	.	-	.	ID=id630;Note=PS00017 ATP%2FGTP-binding site motif A %28P-loop%29.;Dbxref=GeneID:1173760;gbkey=misc_feature
NC_003143.1	RefSeq	gene	1014358	1015380	.	-	.	ID=gene882;Name=y1093;Dbxref=GeneID:1173761;gbkey=Gene;gene=y1093;gene_synonym=ypmt1;locus_tag=YPO0924
NC_003143.1	RefSeq	CDS	1014358	1015380	.	-	0	ID=cds849;Name=YP_002345972.1;Parent=gene882;Dbxref=InterPro:IPR001584,InterPro:IPR006120,InterPro:IPR009057,InterPro:IPR012287,InterPro:IPR012337,UniProtKB%2FTrEMBL:Q7ARN5,Genbank:YP_002345972.1,GeneID:1173761;gbkey=CDS;gene=y1093;product=transposase for insertion sequence IS100;protein_id=YP_002345972.1;transl_table=11
NC_003143.1	RefSeq	region	1015264	1015329	.	-	.	ID=id631;Note=Predicted helix-turn-helix motif with score 2147 %28%2B6.50 SD%29 at aa 18-39%2C sequence MSSRAIARELGISRNTVKRYLQ;Dbxref=GeneID:1173761;gbkey=misc_feature;gene=y1093
NC_003143.1	RefSeq	repeat_region	1015439	1015466	.	-	.	ID=id632;Note=IS100 inverted repeat;gbkey=repeat_region
NC_003143.1	RefSeq	repeat_region	1015465	1016167	.	-	.	ID=id633;Note=Contains an %27A%27 at nucleotide position 315.%7EIS200-like insertion sequence:IS1541;gbkey=repeat_region
NC_003143.1	RefSeq	gene	1015564	1016022	.	-	.	ID=gene883;Name=tnp;Dbxref=GeneID:1173762;gbkey=Gene;gene=tnp;locus_tag=YPO0925
NC_003143.1	RefSeq	CDS	1015564	1016022	.	-	0	ID=cds850;Name=YP_002345973.1;Parent=gene883;Dbxref=InterPro:IPR002686,UniProtKB%2FTrEMBL:Q56938,Genbank:YP_002345973.1,GeneID:1173762;gbkey=CDS;gene=tnp;product=transposase for the IS1541 insertion element;protein_id=YP_002345973.1;transl_table=11
NC_003143.1	RefSeq	gene	1016330	1018324	.	-	.	ID=gene884;Name=tktA;Dbxref=GeneID:1173763;gbkey=Gene;gene=tktA;locus_tag=YPO0926
NC_003143.1	RefSeq	CDS	1016330	1018324	.	-	0	ID=cds851;Name=YP_002345974.1;Parent=gene884;Note=catalyzes the formation of ribose 5-phosphate and xylulose 5-phosphate from sedoheptulose 7-phosphate and glyceraldehyde 3-phosphate%3B can transfer ketol groups between several groups%3B in Escherichia coli there are two tkt genes%2C tktA expressed during exponential growth and the tktB during stationary phase;Dbxref=InterPro:IPR005474,InterPro:IPR005475,InterPro:IPR005476,InterPro:IPR005478,InterPro:IPR009014,UniProtKB%2FTrEMBL:Q7CGS3,Genbank:YP_002345974.1,GeneID:1173763;gbkey=CDS;gene=tktA;product=transketolase;protein_id=YP_002345974.1;transl_table=11
NC_003143.1	RefSeq	region	1016876	1016926	.	-	.	ID=id634;Note=PS00802 Transketolase signature 2.;Dbxref=GeneID:1173763;gbkey=misc_feature;gene=tktA
NC_003143.1	RefSeq	region	1017011	1017076	.	-	.	ID=id635;Note=1 probable transmembrane helix predicted;Dbxref=GeneID:1173763;gbkey=misc_feature;gene=tktA
NC_003143.1	RefSeq	region	1018229	1018291	.	-	.	ID=id636;Note=PS00801 Transketolase signature 1.;Dbxref=GeneID:1173763;gbkey=misc_feature;gene=tktA
NC_003143.1	RefSeq	gene	1018815	1019567	.	+	.	ID=gene885;Name=YPO0927;Dbxref=GeneID:1173764;gbkey=Gene;locus_tag=YPO0927
NC_003143.1	RefSeq	CDS	1018815	1019567	.	+	0	ID=cds852;Name=YP_002345975.1;Parent=gene885;Dbxref=InterPro:IPR001915,UniProtKB%2FTrEMBL:Q0WIB3,Genbank:YP_002345975.1,GeneID:1173764;gbkey=CDS;product=lipoprotein;protein_id=YP_002345975.1;transl_table=11
NC_003143.1	RefSeq	region	1018839	1018871	.	+	.	ID=id637;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site.;Dbxref=GeneID:1173764;gbkey=misc_feature
NC_003143.1	RefSeq	gene	1019857	1020177	.	-	.	ID=gene886;Name=YPO0928;Dbxref=GeneID:1173765;gbkey=Gene;locus_tag=YPO0928
NC_003143.1	RefSeq	CDS	1019857	1020177	.	-	0	ID=cds853;Name=YP_002345976.1;Parent=gene886;Dbxref=InterPro:IPR005806,UniProtKB%2FTrEMBL:Q7CGS2,Genbank:YP_002345976.1,GeneID:1173765;gbkey=CDS;product=Rieske protein;protein_id=YP_002345976.1;transl_table=11
NC_003143.1	RefSeq	gene	1020337	1022316	.	-	.	ID=gene887;Name=speA;Dbxref=GeneID:1173766;gbkey=Gene;gene=speA;locus_tag=YPO0929
NC_003143.1	RefSeq	CDS	1020337	1022316	.	-	0	ID=cds854;Name=YP_002345977.1;Parent=gene887;Note=catalyzes the formation of agmatine from arginine in putrescine and spermidine biosynthesis;Dbxref=InterPro:IPR000183,InterPro:IPR002985,UniProtKB%2FTrEMBL:Q0WIB1,Genbank:YP_002345977.1,GeneID:1173766;gbkey=CDS;gene=speA;product=arginine decarboxylase;protein_id=YP_002345977.1;transl_table=11
NC_003143.1	RefSeq	region	1021372	1021413	.	-	.	ID=id638;Note=PS00879 Orn%2FDAP%2FArg decarboxylases family 2 signature 2.;Dbxref=GeneID:1173766;gbkey=misc_feature;gene=speA
NC_003143.1	RefSeq	region	1021888	1021944	.	-	.	ID=id639;Note=PS00878 Orn%2FDAP%2FArg decarboxylases family 2 pyridoxal-P attachment site.;Dbxref=GeneID:1173766;gbkey=misc_feature;gene=speA
NC_003143.1	RefSeq	gene	1023523	1024677	.	+	.	ID=gene888;Name=metK;Dbxref=GeneID:1173767;gbkey=Gene;gene=metK;locus_tag=YPO0931
NC_003143.1	RefSeq	CDS	1023523	1024677	.	+	0	ID=cds855;Name=YP_002345978.1;Parent=gene888;Note=catalyzes the formation of S-adenosylmethionine from methionine and ATP%3B methionine adenosyltransferase;Dbxref=InterPro:IPR002133,UniProtKB%2FTrEMBL:Q0WIB0,Genbank:YP_002345978.1,GeneID:1173767;gbkey=CDS;gene=metK;product=S-adenosylmethionine synthetase;protein_id=YP_002345978.1;transl_table=11
NC_003143.1	RefSeq	region	1023868	1023900	.	+	.	ID=id640;Note=PS00376 S-adenosylmethionine synthetase signature 1.;Dbxref=GeneID:1173767;gbkey=misc_feature;gene=metK
NC_003143.1	RefSeq	region	1024297	1024323	.	+	.	ID=id641;Note=PS00377 S-adenosylmethionine synthetase signature 2.;Dbxref=GeneID:1173767;gbkey=misc_feature;gene=metK
NC_003143.1	RefSeq	gene	1024870	1025382	.	+	.	ID=gene889;Name=YPO0932;Dbxref=GeneID:1173768;gbkey=Gene;locus_tag=YPO0932
NC_003143.1	RefSeq	CDS	1024870	1025382	.	+	0	ID=cds856;Name=YP_002345979.1;Parent=gene889;Dbxref=InterPro:IPR005622,InterPro:IPR006025,InterPro:IPR006640,UniProtKB%2FTrEMBL:Q0WIA9,Genbank:YP_002345979.1,GeneID:1173768;gbkey=CDS;product=hypothetical protein;protein_id=YP_002345979.1;transl_table=11
NC_003143.1	RefSeq	region	1025092	1025121	.	+	.	ID=id642;Note=PS00142 Neutral zinc metallopeptidases%2C zinc-binding region signature.;Dbxref=GeneID:1173768;gbkey=misc_feature
NC_003143.1	RefSeq	gene	1025480	1026187	.	+	.	ID=gene890;Name=endA;Dbxref=GeneID:1173769;gbkey=Gene;gene=endA;gene_synonym=nucM;locus_tag=YPO0933
NC_003143.1	RefSeq	CDS	1025480	1026187	.	+	0	ID=cds857;Name=YP_002345980.1;Parent=gene890;Dbxref=InterPro:IPR007346,UniProtKB%2FTrEMBL:Q7CGS1,Genbank:YP_002345980.1,GeneID:1173769;gbkey=CDS;gene=endA;product=endonuclease I;protein_id=YP_002345980.1;transl_table=11
NC_003143.1	RefSeq	gene	1026439	1027170	.	+	.	ID=gene891;Name=YPO0934;Dbxref=GeneID:1173770;gbkey=Gene;locus_tag=YPO0934
NC_003143.1	RefSeq	CDS	1026439	1027170	.	+	0	ID=cds858;Name=YP_002345981.1;Parent=gene891;Note=in Escherichia coli RsmE methylates the N3 position of the U1498 base in 16S rRNA%3B cells lacking this function can grow%2C but are outcompeted by wild-type%3B SAM-dependent m%283%29U1498 methyltransferase;Dbxref=InterPro:IPR006700,UniProtKB%2FTrEMBL:Q7CGS0,Genbank:YP_002345981.1,GeneID:1173770;gbkey=CDS;product=16S ribosomal RNA methyltransferase RsmE;protein_id=YP_002345981.1;transl_table=11
NC_003143.1	RefSeq	gene	1027196	1028155	.	+	.	ID=gene892;Name=gshB;Note=gsh-II;Dbxref=GeneID:1173771;gbkey=Gene;gene=gshB;locus_tag=YPO0935
NC_003143.1	RefSeq	CDS	1027196	1028155	.	+	0	ID=cds859;Name=YP_002345982.1;Parent=gene892;Note=catalyzes the second step in the glutathione biosynthesis pathway%2C where it synthesizes ATP %2B gamma-L-glutamyl-L-cysteine %2B glycine %3D ADP %2B phosphate %2B glutathione;Dbxref=InterPro:IPR004215,InterPro:IPR004218,InterPro:IPR006284,InterPro:IPR011761,InterPro:IPR013816,InterPro:IPR013817,UniProtKB%2FTrEMBL:Q0WIA6,Genbank:YP_002345982.1,GeneID:1173771;gbkey=CDS;gene=gshB;product=glutathione synthetase;protein_id=YP_002345982.1;transl_table=11
NC_003143.1	RefSeq	gene	1028271	1028834	.	+	.	ID=gene893;Name=YPO0936;Dbxref=GeneID:1173772;gbkey=Gene;locus_tag=YPO0936
NC_003143.1	RefSeq	CDS	1028271	1028834	.	+	0	ID=cds860;Name=YP_002345983.1;Parent=gene893;Dbxref=InterPro:IPR003774,UniProtKB%2FTrEMBL:Q0WIA5,Genbank:YP_002345983.1,GeneID:1173772;gbkey=CDS;product=hypothetical protein;protein_id=YP_002345983.1;transl_table=11
NC_003143.1	RefSeq	gene	1028834	1029256	.	+	.	ID=gene894;Name=YPO0937;Dbxref=GeneID:1173773;gbkey=Gene;locus_tag=YPO0937
NC_003143.1	RefSeq	CDS	1028834	1029256	.	+	0	ID=cds861;Name=YP_002345984.1;Parent=gene894;Note=similar to RuvC resolvase with substantial differences%3B NMR structural information suggests this protein is monomeric%3B unknown cellular function;Dbxref=InterPro:IPR005227,InterPro:IPR006641,InterPro:IPR012337,UniProtKB%2FTrEMBL:Q0WIA4,Genbank:YP_002345984.1,GeneID:1173773;gbkey=CDS;product=Holliday junction resolvase-like protein;protein_id=YP_002345984.1;transl_table=11
NC_003143.1	RefSeq	gene	1029436	1030320	.	+	.	ID=gene895;Name=YPO0938;Dbxref=GeneID:1173774;gbkey=Gene;locus_tag=YPO0938
NC_003143.1	RefSeq	CDS	1029436	1030320	.	+	0	ID=cds862;Name=YP_002345985.1;Parent=gene895;Dbxref=InterPro:IPR003010,UniProtKB%2FTrEMBL:Q7CGR9,Genbank:YP_002345985.1,GeneID:1173774;gbkey=CDS;product=carbon-nitrogen hydrolase;protein_id=YP_002345985.1;transl_table=11
NC_003143.1	RefSeq	gene	1030324	1031439	.	+	.	ID=gene896;Name=YPO0939;Dbxref=GeneID:1173775;gbkey=Gene;locus_tag=YPO0939
NC_003143.1	RefSeq	CDS	1030324	1031439	.	+	0	ID=cds863;Name=YP_002345986.1;Parent=gene896;Note=catalyzes the formation of carbamoylputrescine from agmatine in the arginine decarboxylase pathway of putrescine biosynthesis;Dbxref=InterPro:IPR007466,UniProtKB%2FTrEMBL:Q0WIA2,Genbank:YP_002345986.1,GeneID:1173775;gbkey=CDS;product=agmatine deiminase;protein_id=YP_002345986.1;transl_table=11
NC_003143.1	RefSeq	gene	1031548	1032624	.	-	.	ID=gene897;Name=YPO0940;Dbxref=GeneID:1173776;gbkey=Gene;locus_tag=YPO0940
NC_003143.1	RefSeq	CDS	1031548	1032624	.	-	0	ID=cds864;Name=YP_002345987.1;Parent=gene897;Dbxref=InterPro:IPR001482,InterPro:IPR003593,InterPro:IPR006321,UniProtKB%2FTrEMBL:Q0WIA1,Genbank:YP_002345987.1,GeneID:1173776;gbkey=CDS;product=hypothetical protein;protein_id=YP_002345987.1;transl_table=11
NC_003143.1	RefSeq	region	1031929	1031973	.	-	.	ID=id643;Note=PS00662 Bacterial type II secretion system protein E signature.;Dbxref=GeneID:1173776;gbkey=misc_feature
NC_003143.1	RefSeq	region	1032139	1032162	.	-	.	ID=id644;Note=PS00017 ATP%2FGTP-binding site motif A %28P-loop%29.;Dbxref=GeneID:1173776;gbkey=misc_feature
NC_003143.1	RefSeq	gene	1032692	1033390	.	+	.	ID=gene898;Name=YPO0941;Dbxref=GeneID:1173777;gbkey=Gene;locus_tag=YPO0941
NC_003143.1	RefSeq	CDS	1032692	1033390	.	+	0	ID=cds865;Name=YP_002345988.1;Parent=gene898;Dbxref=InterPro:IPR001608,InterPro:IPR011078,UniProtKB%2FTrEMBL:Q0WIA0,Genbank:YP_002345988.1,GeneID:1173777;gbkey=CDS;product=hypothetical protein;protein_id=YP_002345988.1;transl_table=11
NC_003143.1	RefSeq	region	1032920	1032964	.	+	.	ID=id645;Note=PS01211 Uncharacterized protein family UPF0001 signature.;Dbxref=GeneID:1173777;gbkey=misc_feature
NC_003143.1	RefSeq	gene	1033523	1034344	.	+	.	ID=gene899;Name=proC;Dbxref=GeneID:1173778;gbkey=Gene;gene=proC;locus_tag=YPO0942
NC_003143.1	RefSeq	CDS	1033523	1034344	.	+	0	ID=cds866;Name=YP_002345989.1;Parent=gene899;Note=catalyzes the formation of L-proline from pyrroline-5-carboxylate;Dbxref=InterPro:IPR000304,InterPro:IPR000719,InterPro:IPR004455,UniProtKB%2FTrEMBL:Q7CGR8,Genbank:YP_002345989.1,GeneID:1173778;gbkey=CDS;gene=proC;product=pyrroline-5-carboxylate reductase;protein_id=YP_002345989.1;transl_table=11
NC_003143.1	RefSeq	region	1033547	1033612	.	+	.	ID=id646;Note=PS00107 Protein kinases ATP-binding region signature.;Dbxref=GeneID:1173778;gbkey=misc_feature;gene=proC
NC_003143.1	RefSeq	region	1034192	1034263	.	+	.	ID=id647;Note=PS00521 Delta 1-pyrroline-5-carboxylate reductase signature.;Dbxref=GeneID:1173778;gbkey=misc_feature;gene=proC
NC_003143.1	RefSeq	gene	1034632	1035186	.	+	.	ID=gene900;Name=yggT;Dbxref=GeneID:1173779;gbkey=Gene;gene=yggT;locus_tag=YPO0943
NC_003143.1	RefSeq	CDS	1034632	1035186	.	+	0	ID=cds867;Name=YP_002345990.1;Parent=gene900;Dbxref=InterPro:IPR003425,UniProtKB%2FTrEMBL:Q7CGR7,Genbank:YP_002345990.1,GeneID:1173779;gbkey=CDS;gene=yggT;product=hypothetical protein;protein_id=YP_002345990.1;transl_table=11
NC_003143.1	RefSeq	gene	1035183	1035473	.	+	.	ID=gene901;Name=yggT;Dbxref=GeneID:1173780;gbkey=Gene;gene=yggT;locus_tag=YPO0944
NC_003143.1	RefSeq	CDS	1035183	1035473	.	+	0	ID=cds868;Name=YP_002345991.1;Parent=gene901;Dbxref=InterPro:IPR003746,InterPro:IPR005228,UniProtKB%2FTrEMBL:Q0WI97,Genbank:YP_002345991.1,GeneID:1173780;gbkey=CDS;product=hypothetical protein;protein_id=YP_002345991.1;transl_table=11
NC_003143.1	RefSeq	gene	1035573	1036166	.	+	.	ID=gene902;Name=YPO0945;Dbxref=GeneID:1173781;gbkey=Gene;locus_tag=YPO0945
NC_003143.1	RefSeq	CDS	1035573	1036166	.	+	0	ID=cds869;Name=YP_002345992.1;Parent=gene902;Note=HAM1-like protein%3B Rec-dependent growth%3B RgdB%3B yggV%3B it is suspected that this protein functions to remove misincorporated bases such as xanthine or hypoxanthine;Dbxref=InterPro:IPR002637,UniProtKB%2FTrEMBL:Q0WI96,Genbank:YP_002345992.1,GeneID:1173781;gbkey=CDS;product=deoxyribonucleotide triphosphate pyrophosphatase;protein_id=YP_002345992.1;transl_table=11
NC_003143.1	RefSeq	gene	1036159	1037289	.	+	.	ID=gene903;Name=YPO0946;Dbxref=GeneID:1173782;gbkey=Gene;locus_tag=YPO0946
NC_003143.1	RefSeq	CDS	1036159	1037289	.	+	0	ID=cds870;Name=YP_002345993.1;Parent=gene903;Note=catalyzes the oxygen-independent formation of protoporphyrinogen-IX from coproporphyrinogen-III;Dbxref=InterPro:IPR004559,InterPro:IPR006638,InterPro:IPR007197,InterPro:IPR010723,UniProtKB%2FTrEMBL:Q0WI95,Genbank:YP_002345993.1,GeneID:1173782;gbkey=CDS;product=coproporphyrinogen III oxidase;protein_id=YP_002345993.1;transl_table=11
NC_003143.1	RefSeq	gene	1037479	1046811	.	-	.	ID=gene904;Name=YPO0947;Dbxref=GeneID:1173783;gbkey=Gene;locus_tag=YPO0947
NC_003143.1	RefSeq	CDS	1037479	1046811	.	-	0	ID=cds871;Name=YP_002345994.1;Parent=gene904;Dbxref=InterPro:IPR001343,InterPro:IPR004154,InterPro:IPR008928,InterPro:IPR011049,UniProtKB%2FTrEMBL:Q7CGR6,Genbank:YP_002345994.1,GeneID:1173783;gbkey=CDS;product=virulence determinant;protein_id=YP_002345994.1;transl_table=11
NC_003143.1	RefSeq	gene	1047313	1048067	.	-	.	ID=gene905;Name=YPO0948;Dbxref=GeneID:1173784;gbkey=Gene;locus_tag=YPO0948;pseudo=true
NC_003143.1	RefSeq	gene	1048155	1049081	.	-	.	ID=gene906;Name=YPO0949;Dbxref=GeneID:1173785;gbkey=Gene;locus_tag=YPO0949
NC_003143.1	RefSeq	CDS	1048155	1049081	.	-	0	ID=cds872;Name=YP_002345995.1;Parent=gene906;Note=catalyzes the formation of glutamate from glutamine;Dbxref=InterPro:IPR007043,InterPro:IPR012338,UniProtKB%2FTrEMBL:Q0WI93,Genbank:YP_002345995.1,GeneID:1173785;gbkey=CDS;product=glutaminase;protein_id=YP_002345995.1;transl_table=11
NC_003143.1	RefSeq	gene	1049192	1049518	.	-	.	ID=gene907;Name=YPO0950;Dbxref=GeneID:1173786;gbkey=Gene;locus_tag=YPO0950
NC_003143.1	RefSeq	CDS	1049192	1049518	.	-	0	ID=cds873;Name=YP_002345996.1;Parent=gene907;Dbxref=InterPro:IPR007416,UniProtKB%2FTrEMBL:Q7CGR4,Genbank:YP_002345996.1,GeneID:1173786;gbkey=CDS;product=hypothetical protein;protein_id=YP_002345996.1;transl_table=11
NC_003143.1	RefSeq	gene	1049518	1050237	.	-	.	ID=gene908;Name=trmB;Dbxref=GeneID:1173787;gbkey=Gene;gene=trmB;locus_tag=YPO0951
NC_003143.1	RefSeq	CDS	1049518	1050237	.	-	0	ID=cds874;Name=YP_002345997.1;Parent=gene908;Note=tRNA %28guanine-N%287%29-%29-methyltransferase%3B catalyzes the formation of N%287%29-methylguanine at position 46 %28m7G46%29 in tRNA by transferring the methyl residue from S-adenosyl-L-methionine;Dbxref=InterPro:IPR003358,InterPro:IPR004395,UniProtKB%2FTrEMBL:Q0WI91,Genbank:YP_002345997.1,GeneID:1173787;gbkey=CDS;gene=trmB;product=tRNA %28guanine-N%287%29-%29-methyltransferase;protein_id=YP_002345997.1;transl_table=11
NC_003143.1	RefSeq	gene	1050575	1051690	.	+	.	ID=gene909;Name=mutY;Dbxref=GeneID:1173788;gbkey=Gene;gene=mutY;locus_tag=YPO0952
NC_003143.1	RefSeq	CDS	1050575	1051690	.	+	0	ID=cds875;Name=YP_002345998.1;Parent=gene909;Dbxref=InterPro:IPR000086,InterPro:IPR000445,InterPro:IPR003265,InterPro:IPR003583,InterPro:IPR003651,InterPro:IPR004035,InterPro:IPR004036,InterPro:IPR005760,InterPro:IPR011257,UniProtKB%2FTrEMBL:Q0WI90,Genbank:YP_002345998.1,GeneID:1173788;gbkey=CDS;gene=mutY;product=adenine DNA glycosylase;protein_id=YP_002345998.1;transl_table=11
NC_003143.1	RefSeq	region	1051148	1051198	.	+	.	ID=id648;Note=PS00764 Endonuclease III iron-sulfur binding region signature.;Dbxref=GeneID:1173788;gbkey=misc_feature;gene=mutY
NC_003143.1	RefSeq	gene	1051868	1052140	.	+	.	ID=gene910;Name=YPO0953;Dbxref=GeneID:1173789;gbkey=Gene;locus_tag=YPO0953
NC_003143.1	RefSeq	CDS	1051868	1052140	.	+	0	ID=cds876;Name=YP_002345999.1;Parent=gene910;Dbxref=InterPro:IPR007457,UniProtKB%2FTrEMBL:Q0WI89,Genbank:YP_002345999.1,GeneID:1173789;gbkey=CDS;product=hypothetical protein;protein_id=YP_002345999.1;transl_table=11
NC_003143.1	RefSeq	gene	1052323	1053399	.	+	.	ID=gene911;Name=mltC;Dbxref=GeneID:1173790;gbkey=Gene;gene=mltC;locus_tag=YPO0954
NC_003143.1	RefSeq	CDS	1052323	1053399	.	+	0	ID=cds877;Name=YP_002346000.1;Parent=gene911;Note=Murein hydrolase C%3B membrane-bound%3B lytic%3B catalyzes the cleavage of the beta-1%2C4-glycosidic bond between N-acetylmuramic acid and N-acetylglucosamine residues;Dbxref=InterPro:IPR000189,InterPro:IPR008258,UniProtKB%2FTrEMBL:Q0WI88,Genbank:YP_002346000.1,GeneID:1173790;gbkey=CDS;gene=mltC;product=murein transglycosylase C;protein_id=YP_002346000.1;transl_table=11
NC_003143.1	RefSeq	region	1052341	1052373	.	+	.	ID=id649;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site.;Dbxref=GeneID:1173790;gbkey=misc_feature;gene=mltC
NC_003143.1	RefSeq	region	1052956	1053042	.	+	.	ID=id650;Note=PS00922 Prokaryotic transglycosylases signature.;Dbxref=GeneID:1173790;gbkey=misc_feature;gene=mltC
NC_003143.1	RefSeq	gene	1053699	1054799	.	+	.	ID=gene912;Name=YPO0955;Dbxref=GeneID:1173791;gbkey=Gene;locus_tag=YPO0955
NC_003143.1	RefSeq	CDS	1053699	1054799	.	+	0	ID=cds878;Name=YP_002346001.2;Parent=gene912;Dbxref=InterPro:IPR002491,UniProtKB%2FTrEMBL:Q74QI3,Genbank:YP_002346001.2,GeneID:1173791;gbkey=CDS;product=hypothetical protein;protein_id=YP_002346001.2;transl_table=11
NC_003143.1	RefSeq	gene	1054837	1056936	.	+	.	ID=gene913;Name=YPO0956;Dbxref=GeneID:1173792;gbkey=Gene;locus_tag=YPO0956
NC_003143.1	RefSeq	CDS	1054837	1056936	.	+	0	ID=cds879;Name=YP_002346002.1;Parent=gene913;Dbxref=InterPro:IPR000531,InterPro:IPR010105,InterPro:IPR012910,UniProtKB%2FTrEMBL:Q0WI86,Genbank:YP_002346002.1,GeneID:1173792;gbkey=CDS;product=hydroxamate-type ferrisiderophore receptor;protein_id=YP_002346002.1;transl_table=11
NC_003143.1	RefSeq	region	1054852	1054911	.	+	.	ID=id651;Note=1 probable transmembrane helix predicted;Dbxref=GeneID:1173792;gbkey=misc_feature
NC_003143.1	RefSeq	gene	1057019	1058038	.	-	.	ID=gene914;Name=YPO0957;Dbxref=GeneID:1173793;gbkey=Gene;locus_tag=YPO0957
NC_003143.1	RefSeq	CDS	1057019	1058038	.	-	0	ID=cds880;Name=YP_002346003.1;Parent=gene914;Dbxref=InterPro:IPR001851,UniProtKB%2FTrEMBL:Q7CGR2,Genbank:YP_002346003.1,GeneID:1173793;gbkey=CDS;product=sugar transport system permease;protein_id=YP_002346003.1;transl_table=11
NC_003143.1	RefSeq	region	1057202	1057243	.	-	.	ID=id652;Note=PS01039 Bacterial extracellular solute-binding proteins%2C family 3 signature.;Dbxref=GeneID:1173793;gbkey=misc_feature
NC_003143.1	RefSeq	gene	1058035	1059534	.	-	.	ID=gene915;Name=mglA;Dbxref=GeneID:1173794;gbkey=Gene;gene=mglA;gene_synonym=rbsA;locus_tag=YPO0958
NC_003143.1	RefSeq	CDS	1058035	1059534	.	-	0	ID=cds881;Name=YP_002346004.1;Parent=gene915;Dbxref=InterPro:IPR003439,InterPro:IPR003593,UniProtKB%2FTrEMBL:Q7CGR1,Genbank:YP_002346004.1,GeneID:1173794;gbkey=CDS;gene=mglA;product=sugar transport ATP-binding protein;protein_id=YP_002346004.1;transl_table=11
NC_003143.1	RefSeq	region	1058302	1058346	.	-	.	ID=id653;Note=PS00211 ABC transporters family signature.;Dbxref=GeneID:1173794;gbkey=misc_feature;gene=mglA
NC_003143.1	RefSeq	region	1059400	1059423	.	-	.	ID=id654;Note=PS00017 ATP%2FGTP-binding site motif A %28P-loop%29.;Dbxref=GeneID:1173794;gbkey=misc_feature;gene=mglA
NC_003143.1	RefSeq	gene	1059580	1060539	.	-	.	ID=gene916;Name=YPO0959;Dbxref=GeneID:1173795;gbkey=Gene;locus_tag=YPO0959
NC_003143.1	RefSeq	CDS	1059580	1060539	.	-	0	ID=cds882;Name=YP_002346005.1;Parent=gene916;Dbxref=InterPro:IPR001761,UniProtKB%2FTrEMBL:Q7CGR0,Genbank:YP_002346005.1,GeneID:1173795;gbkey=CDS;product=sugar ABC transporter substrate-binding protein;protein_id=YP_002346005.1;transl_table=11
NC_003143.1	RefSeq	gene	1061095	1063257	.	-	.	ID=gene917;Name=speC;Dbxref=GeneID:1173796;gbkey=Gene;gene=speC;locus_tag=YPO0960
NC_003143.1	RefSeq	CDS	1061095	1063257	.	-	0	ID=cds883;Name=YP_002346006.1;Parent=gene917;Dbxref=InterPro:IPR000310,InterPro:IPR005308,InterPro:IPR008286,InterPro:IPR011006,InterPro:IPR011193,UniProtKB%2FTrEMBL:Q7CGQ9,Genbank:YP_002346006.1,GeneID:1173796;gbkey=CDS;gene=speC;product=ornithine decarboxylase;protein_id=YP_002346006.1;transl_table=11
NC_003143.1	RefSeq	region	1062166	1062210	.	-	.	ID=id655;Note=PS00703 Orn%2FLys%2FArg decarboxylases family 1 pyridoxal-P attachment site.;Dbxref=GeneID:1173796;gbkey=misc_feature;gene=speC
NC_003143.1	RefSeq	gene	1063926	1064001	.	+	.	ID=gene918;Name=YPt_07;Dbxref=GeneID:1173797;gbkey=Gene;locus_tag=YPt_07
NC_003143.1	RefSeq	tRNA	1063926	1064001	.	+	.	ID=rna12;Parent=gene918;Note=tRNA Phe anticodon GAA%2C Cove score 84.11;Dbxref=GeneID:1173797;gbkey=tRNA;product=tRNA-Phe
NC_003143.1	RefSeq	exon	1063926	1064001	.	+	.	ID=id656;Parent=rna12;Note=tRNA Phe anticodon GAA%2C Cove score 84.11;Dbxref=GeneID:1173797;gbkey=tRNA;product=tRNA-Phe
NC_003143.1	RefSeq	gene	1065829	1066185	.	-	.	ID=gene919;Name=insB;Dbxref=GeneID:1173800;gbkey=Gene;gene=insB;locus_tag=YPO0963
NC_003143.1	RefSeq	CDS	1065829	1066185	.	-	0	ID=cds884;Name=YP_002346009.1;Parent=gene919;Dbxref=InterPro:IPR005063,UniProtKB%2FTrEMBL:Q0WI79,Genbank:YP_002346009.1,GeneID:1173800;gbkey=CDS;gene=insB;product=insertion sequence protein;protein_id=YP_002346009.1;transl_table=11
NC_003143.1	RefSeq	gene	1066251	1066526	.	-	.	ID=gene920;Name=insA;Dbxref=GeneID:1173801;gbkey=Gene;gene=insA;locus_tag=YPO0964
NC_003143.1	RefSeq	CDS	1066251	1066526	.	-	0	ID=cds885;Name=YP_002346010.1;Parent=gene920;Dbxref=InterPro:IPR003220,InterPro:IPR009057,UniProtKB%2FTrEMBL:Q0WI78,Genbank:YP_002346010.1,GeneID:1173801;gbkey=CDS;gene=insA;product=insertion sequence protein;protein_id=YP_002346010.1;transl_table=11
NC_003143.1	RefSeq	region	1066272	1066337	.	-	.	ID=id657;Note=Predicted helix-turn-helix motif with score 1231 %28%2B3.38 SD%29 at aa 64-85%2C sequence AGIRDTARALHISINAVMRTLK;Dbxref=GeneID:1173801;gbkey=misc_feature;gene=insA
NC_003143.1	RefSeq	gene	1066622	1067371	.	-	.	ID=gene921;Name=YPO0965;Dbxref=GeneID:1173802;gbkey=Gene;locus_tag=YPO0965
NC_003143.1	RefSeq	CDS	1066622	1067371	.	-	0	ID=cds886;Name=YP_002346011.1;Parent=gene921;Note=no significant database hits;Dbxref=UniProtKB%2FTrEMBL:Q0WI77,Genbank:YP_002346011.1,GeneID:1173802;gbkey=CDS;product=hypothetical protein;protein_id=YP_002346011.1;transl_table=11
NC_003143.1	RefSeq	gene	1067376	1069673	.	-	.	ID=gene922;Name=YPO0966;Dbxref=GeneID:1173803;gbkey=Gene;locus_tag=YPO0966
NC_003143.1	RefSeq	CDS	1067376	1069673	.	-	0	ID=cds887;Name=YP_002346012.1;Parent=gene922;Dbxref=InterPro:IPR000719,InterPro:IPR002886,InterPro:IPR011055,UniProtKB%2FTrEMBL:Q7CGQ7,Genbank:YP_002346012.1,GeneID:1173803;gbkey=CDS;product=kinase;protein_id=YP_002346012.1;transl_table=11
NC_003143.1	RefSeq	region	1069293	1069370	.	-	.	ID=id658;Note=PS00107 Protein kinases ATP-binding region signature.;Dbxref=GeneID:1173803;gbkey=misc_feature
NC_003143.1	RefSeq	gene	1071245	1071520	.	-	.	ID=gene923;Name=insA;Dbxref=GeneID:1173806;gbkey=Gene;gene=insA;locus_tag=YPO0968
NC_003143.1	RefSeq	CDS	1071245	1071520	.	-	0	ID=cds888;Name=YP_002346015.1;Parent=gene923;Dbxref=InterPro:IPR003220,InterPro:IPR009057,UniProtKB%2FTrEMBL:Q0WI73,Genbank:YP_002346015.1,GeneID:1173806;gbkey=CDS;gene=insA;product=insertion sequence protein;protein_id=YP_002346015.1;transl_table=11
NC_003143.1	RefSeq	region	1071266	1071331	.	-	.	ID=id659;Note=Predicted helix-turn-helix motif with score 1231 %28%2B3.38 SD%29 at aa 64-85%2C sequence AGIRDTARALHISINAVMRTLK;Dbxref=GeneID:1173806;gbkey=misc_feature;gene=insA
NC_003143.1	RefSeq	gene	1071907	1072397	.	-	.	ID=gene924;Name=YPO0968a;Dbxref=GeneID:1173807;gbkey=Gene;locus_tag=YPO0968a;pseudo=true
NC_003143.1	RefSeq	gene	1072398	1074620	.	-	.	ID=gene925;Name=YPO0969;Dbxref=GeneID:1173808;gbkey=Gene;locus_tag=YPO0969
NC_003143.1	RefSeq	CDS	1072398	1074620	.	-	0	ID=cds889;Name=YP_002346017.1;Parent=gene925;Note=no significant database hits;Dbxref=InterPro:IPR002886,UniProtKB%2FTrEMBL:Q7CGQ4,Genbank:YP_002346017.1,GeneID:1173808;gbkey=CDS;product=hypothetical protein;protein_id=YP_002346017.1;transl_table=11
NC_003143.1	RefSeq	gene	1074635	1076983	.	-	.	ID=gene926;Name=YPO0970;Dbxref=GeneID:1173809;gbkey=Gene;locus_tag=YPO0970
NC_003143.1	RefSeq	CDS	1074635	1076983	.	-	0	ID=cds890;Name=YP_002346018.1;Parent=gene926;Dbxref=InterPro:IPR006533,UniProtKB%2FTrEMBL:Q7CGQ3,Genbank:YP_002346018.1,GeneID:1173809;gbkey=CDS;product=hypothetical protein;protein_id=YP_002346018.1;transl_table=11
NC_003143.1	RefSeq	gene	1076980	1079628	.	-	.	ID=gene927;Name=clpB3;Dbxref=GeneID:1173810;gbkey=Gene;gene=clpB3;locus_tag=YPO0971
NC_003143.1	RefSeq	CDS	1076980	1079628	.	-	0	ID=cds891;Name=YP_002346019.1;Parent=gene927;Dbxref=InterPro:IPR001270,InterPro:IPR003593,InterPro:IPR003959,InterPro:IPR004176,InterPro:IPR013093,UniProtKB%2FTrEMBL:Q7CGQ2,Genbank:YP_002346019.1,GeneID:1173810;gbkey=CDS;gene=clpB3;product=Clp ATPase;protein_id=YP_002346019.1;transl_table=11
NC_003143.1	RefSeq	region	1077751	1077774	.	-	.	ID=id660;Note=PS00017 ATP%2FGTP-binding site motif A %28P-loop%29.;Dbxref=GeneID:1173810;gbkey=misc_feature;gene=clpB3
NC_003143.1	RefSeq	region	1078603	1078641	.	-	.	ID=id661;Note=PS00870 Chaperonins clpA%2FB signature 1.;Dbxref=GeneID:1173810;gbkey=misc_feature;gene=clpB3
NC_003143.1	RefSeq	region	1078882	1078905	.	-	.	ID=id662;Note=PS00017 ATP%2FGTP-binding site motif A %28P-loop%29.;Dbxref=GeneID:1173810;gbkey=misc_feature;gene=clpB3
NC_003143.1	RefSeq	gene	1080046	1080537	.	-	.	ID=gene928;Name=YPO0973;Dbxref=GeneID:1173811;gbkey=Gene;locus_tag=YPO0973
NC_003143.1	RefSeq	CDS	1080046	1080537	.	-	0	ID=cds892;Name=YP_002346020.1;Parent=gene928;Dbxref=InterPro:IPR008514,UniProtKB%2FTrEMBL:Q7CHN3,Genbank:YP_002346020.1,GeneID:1173811;gbkey=CDS;product=hypothetical protein;protein_id=YP_002346020.1;transl_table=11
NC_003143.1	RefSeq	gene	1080541	1082277	.	-	.	ID=gene929;Name=YPO0974;Dbxref=GeneID:1173812;gbkey=Gene;locus_tag=YPO0974
NC_003143.1	RefSeq	CDS	1080541	1082277	.	-	0	ID=cds893;Name=YP_002346021.1;Parent=gene929;Dbxref=InterPro:IPR006665,UniProtKB%2FTrEMBL:Q7CHN2,Genbank:YP_002346021.1,GeneID:1173812;gbkey=CDS;product=OmpA family membrane protein;protein_id=YP_002346021.1;transl_table=11
NC_003143.1	RefSeq	region	1082185	1082250	.	-	.	ID=id663;Note=1 probable transmembrane helix predicted;Dbxref=GeneID:1173812;gbkey=misc_feature
NC_003143.1	RefSeq	gene	1082277	1082963	.	-	.	ID=gene930;Name=YPO0975;Dbxref=GeneID:1173813;gbkey=Gene;locus_tag=YPO0975
NC_003143.1	RefSeq	CDS	1082277	1082963	.	-	0	ID=cds894;Name=YP_002346022.1;Parent=gene930;Dbxref=UniProtKB%2FTrEMBL:Q7CHN1,Genbank:YP_002346022.1,GeneID:1173813;gbkey=CDS;product=hypothetical protein;protein_id=YP_002346022.1;transl_table=11
NC_003143.1	RefSeq	region	1082328	1082384	.	-	.	ID=id664;Note=1 probable transmembrane helix predicted;Dbxref=GeneID:1173813;gbkey=misc_feature
NC_003143.1	RefSeq	gene	1082960	1084312	.	-	.	ID=gene931;Name=YPO0976;Dbxref=GeneID:1173814;gbkey=Gene;locus_tag=YPO0976
NC_003143.1	RefSeq	CDS	1082960	1084312	.	-	0	ID=cds895;Name=YP_002346023.1;Parent=gene931;Dbxref=InterPro:IPR010263,UniProtKB%2FTrEMBL:Q7CHN0,Genbank:YP_002346023.1,GeneID:1173814;gbkey=CDS;product=hypothetical protein;protein_id=YP_002346023.1;transl_table=11
NC_003143.1	RefSeq	gene	1084324	1085868	.	-	.	ID=gene932;Name=YPO0977;Dbxref=GeneID:1173815;gbkey=Gene;locus_tag=YPO0977
NC_003143.1	RefSeq	CDS	1084324	1085868	.	-	0	ID=cds896;Name=YP_002346024.1;Parent=gene932;Dbxref=InterPro:IPR010269,UniProtKB%2FTrEMBL:Q7CHM9,Genbank:YP_002346024.1,GeneID:1173815;gbkey=CDS;product=hypothetical protein;protein_id=YP_002346024.1;transl_table=11
NC_003143.1	RefSeq	gene	1085911	1086411	.	-	.	ID=gene933;Name=YPO0978;Dbxref=GeneID:1173816;gbkey=Gene;locus_tag=YPO0978
NC_003143.1	RefSeq	CDS	1085911	1086411	.	-	0	ID=cds897;Name=YP_002346025.1;Parent=gene933;Dbxref=InterPro:IPR008312,UniProtKB%2FTrEMBL:Q0WI63,Genbank:YP_002346025.1,GeneID:1173816;gbkey=CDS;product=hypothetical protein;protein_id=YP_002346025.1;transl_table=11
NC_003143.1	RefSeq	gene	1087811	1088182	.	-	.	ID=gene934;Name=YPO0978a;Dbxref=GeneID:17699569;gbkey=Gene;locus_tag=YPO0978a
NC_003143.1	RefSeq	CDS	1087811	1088182	.	-	0	ID=cds898;Name=YP_008853945.1;Parent=gene934;Dbxref=Genbank:YP_008853945.1,GeneID:17699569;gbkey=CDS;product=hypothetical protein;protein_id=YP_008853945.1;transl_table=11
NC_003143.1	RefSeq	gene	1088356	1088619	.	-	.	ID=gene935;Name=insA;Dbxref=GeneID:1173820;gbkey=Gene;gene=insA;locus_tag=YPO0981
NC_003143.1	RefSeq	CDS	1088356	1088619	.	-	0	ID=cds899;Name=YP_002346028.1;Parent=gene935;Dbxref=InterPro:IPR003220,InterPro:IPR009057,UniProtKB%2FTrEMBL:Q0WI60,Genbank:YP_002346028.1,GeneID:1173820;gbkey=CDS;gene=insA;product=insertion element protein;protein_id=YP_002346028.1;transl_table=11
NC_003143.1	RefSeq	gene	1088687	1089082	.	-	.	ID=gene936;Name=YPO0982;Dbxref=GeneID:1173821;gbkey=Gene;locus_tag=YPO0982
NC_003143.1	RefSeq	CDS	1088687	1089082	.	-	0	ID=cds900;Name=YP_002346029.1;Parent=gene936;Dbxref=UniProtKB%2FTrEMBL:Q7CGP5,Genbank:YP_002346029.1,GeneID:1173821;gbkey=CDS;product=lipoprotein;protein_id=YP_002346029.1;transl_table=11
NC_003143.1	RefSeq	region	1089020	1089052	.	-	.	ID=id665;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site.;Dbxref=GeneID:1173821;gbkey=misc_feature
NC_003143.1	RefSeq	gene	1089533	1090183	.	-	.	ID=gene937;Name=YPO0983;Dbxref=GeneID:1173822;gbkey=Gene;locus_tag=YPO0983
NC_003143.1	RefSeq	CDS	1089533	1090183	.	-	0	ID=cds901;Name=YP_002346030.1;Parent=gene937;Dbxref=InterPro:IPR003675,UniProtKB%2FTrEMBL:Q7CGP4,Genbank:YP_002346030.1,GeneID:1173822;gbkey=CDS;product=hypothetical protein;protein_id=YP_002346030.1;transl_table=11
NC_003143.1	RefSeq	gene	1091363	1092013	.	+	.	ID=gene938;Name=yspI;Dbxref=GeneID:1173823;gbkey=Gene;gene=yspI;locus_tag=YPO0984
NC_003143.1	RefSeq	CDS	1091363	1092013	.	+	0	ID=cds902;Name=YP_002346031.1;Parent=gene938;Dbxref=InterPro:IPR001690,UniProtKB%2FTrEMBL:Q7CGP3,Genbank:YP_002346031.1,GeneID:1173823;gbkey=CDS;gene=yspI;product=N-acylhomoserine lactone synthase;protein_id=YP_002346031.1;transl_table=11
NC_003143.1	RefSeq	region	1091429	1091506	.	+	.	ID=id666;Note=PS00949 Autoinducers synthetases family signature.;Dbxref=GeneID:1173823;gbkey=misc_feature;gene=yspI
NC_003143.1	RefSeq	gene	1091994	1092737	.	-	.	ID=gene939;Name=yspR;Dbxref=GeneID:1173824;gbkey=Gene;gene=yspR;locus_tag=YPO0985
NC_003143.1	RefSeq	CDS	1091994	1092737	.	-	0	ID=cds903;Name=YP_002346032.1;Parent=gene939;Dbxref=InterPro:IPR000792,InterPro:IPR005143,InterPro:IPR011991,UniProtKB%2FTrEMBL:Q7CGP2,Genbank:YP_002346032.1,GeneID:1173824;gbkey=CDS;gene=yspR;product=quorum-sensing transcriptional regulator;protein_id=YP_002346032.1;transl_table=11
NC_003143.1	RefSeq	region	1092069	1092152	.	-	.	ID=id667;Note=PS00622 Bacterial regulatory proteins%2C luxR family signature.;Dbxref=GeneID:1173824;gbkey=misc_feature;gene=yspR
NC_003143.1	RefSeq	region	1092084	1092149	.	-	.	ID=id668;Note=Predicted helix-turn-helix motif with score 1900 %28%2B5.66 SD%29 at aa 197-218%2C sequence KTYQEIAIITNITPRTVKYHIG;Dbxref=GeneID:1173824;gbkey=misc_feature;gene=yspR
NC_003143.1	RefSeq	repeat_region	1092755	1092791	.	+	.	ID=id669;gbkey=repeat_region
NC_003143.1	RefSeq	repeat_region	1092915	1092966	.	+	.	ID=id670;gbkey=repeat_region
NC_003143.1	RefSeq	gene	1093299	1094675	.	+	.	ID=gene940;Name=YPO0986;Dbxref=GeneID:1173825;gbkey=Gene;locus_tag=YPO0986
NC_003143.1	RefSeq	CDS	1093299	1094675	.	+	0	ID=cds904;Name=YP_002346033.1;Parent=gene940;Dbxref=InterPro:IPR006311,UniProtKB%2FTrEMBL:Q7CGP1,Genbank:YP_002346033.1,GeneID:1173825;gbkey=CDS;product=hypothetical protein;protein_id=YP_002346033.1;transl_table=11
NC_003143.1	RefSeq	gene	1095052	1095885	.	+	.	ID=gene941;Name=YPO0987;Dbxref=GeneID:1173826;gbkey=Gene;locus_tag=YPO0987
NC_003143.1	RefSeq	CDS	1095052	1095885	.	+	0	ID=cds905;Name=YP_002346034.1;Parent=gene941;Dbxref=InterPro:IPR000627,UniProtKB%2FTrEMBL:Q7CGP0,Genbank:YP_002346034.1,GeneID:1173826;gbkey=CDS;product=hypothetical protein;protein_id=YP_002346034.1;transl_table=11
NC_003143.1	RefSeq	gene	1096175	1097398	.	-	.	ID=gene942;Name=YPO0988;Dbxref=GeneID:1173827;gbkey=Gene;locus_tag=YPO0988
NC_003143.1	RefSeq	CDS	1096175	1097398	.	-	0	ID=cds906;Name=YP_002346035.1;Parent=gene942;Dbxref=InterPro:IPR007114,InterPro:IPR011701,UniProtKB%2FTrEMBL:Q74QL4,Genbank:YP_002346035.1,GeneID:1173827;gbkey=CDS;product=hypothetical protein;protein_id=YP_002346035.1;transl_table=11
NC_003143.1	RefSeq	gene	1097538	1099306	.	+	.	ID=gene943;Name=iucA;Dbxref=GeneID:1173828;gbkey=Gene;gene=iucA;locus_tag=YPO0989;pseudo=true
NC_003143.1	RefSeq	gene	1099293	1100243	.	+	.	ID=gene944;Name=iucB;Dbxref=GeneID:1173829;gbkey=Gene;gene=iucB;locus_tag=YPO0991
NC_003143.1	RefSeq	CDS	1099293	1100243	.	+	0	ID=cds907;Name=YP_002346036.1;Parent=gene944;Dbxref=UniProtKB%2FTrEMBL:Q7CGN9,Genbank:YP_002346036.1,GeneID:1173829;gbkey=CDS;gene=iucB;product=siderophore biosynthesis protein IucB;protein_id=YP_002346036.1;transl_table=11
NC_003143.1	RefSeq	gene	1100240	1101988	.	+	.	ID=gene945;Name=iucC;Dbxref=GeneID:1173830;gbkey=Gene;gene=iucC;locus_tag=YPO0992
NC_003143.1	RefSeq	CDS	1100240	1101988	.	+	0	ID=cds908;Name=YP_002346037.1;Parent=gene945;Dbxref=InterPro:IPR007310,UniProtKB%2FTrEMBL:Q7CGN8,Genbank:YP_002346037.1,GeneID:1173830;gbkey=CDS;gene=iucC;product=siderophore biosynthesis protein IucC;protein_id=YP_002346037.1;transl_table=11
NC_003143.1	RefSeq	gene	1101985	1103313	.	+	.	ID=gene946;Name=iucD;Dbxref=GeneID:1173831;gbkey=Gene;gene=iucD;locus_tag=YPO0993
NC_003143.1	RefSeq	CDS	1101985	1103313	.	+	0	ID=cds909;Name=YP_002346038.1;Parent=gene946;Dbxref=UniProtKB%2FTrEMBL:Q7CGN7,Genbank:YP_002346038.1,GeneID:1173831;gbkey=CDS;gene=iucD;product=siderophore biosynthesis protein IucD;protein_id=YP_002346038.1;transl_table=11
NC_003143.1	RefSeq	region	1102003	1102080	.	+	.	ID=id671;Note=PS00217 Sugar transport proteins signature 2.;Dbxref=GeneID:1173831;gbkey=misc_feature;gene=iucD
NC_003143.1	RefSeq	gene	1103385	1105565	.	+	.	ID=gene947;Name=iutA;Dbxref=GeneID:1173832;gbkey=Gene;gene=iutA;locus_tag=YPO0994
NC_003143.1	RefSeq	CDS	1103385	1105565	.	+	0	ID=cds910;Name=YP_002346039.1;Parent=gene947;Dbxref=InterPro:IPR000531,InterPro:IPR010105,InterPro:IPR010917,InterPro:IPR012910,UniProtKB%2FTrEMBL:Q7CGN6,Genbank:YP_002346039.1,GeneID:1173832;gbkey=CDS;gene=iutA;product=ferric siderophore receptor;protein_id=YP_002346039.1;transl_table=11
NC_003143.1	RefSeq	region	1105509	1105562	.	+	.	ID=id672;Note=PS01156 TonB-dependent receptor proteins signature 2.;Dbxref=GeneID:1173832;gbkey=misc_feature;gene=iutA
NC_003143.1	RefSeq	gene	1105824	1107257	.	-	.	ID=gene948;Name=YPO0995;Dbxref=GeneID:1173833;gbkey=Gene;locus_tag=YPO0995
NC_003143.1	RefSeq	CDS	1105824	1107257	.	-	0	ID=cds911;Name=YP_002346040.1;Parent=gene948;Dbxref=InterPro:IPR001927,InterPro:IPR011701,UniProtKB%2FTrEMBL:Q7CGN5,Genbank:YP_002346040.1,GeneID:1173833;gbkey=CDS;product=sodium:galactoside symporter family protein;protein_id=YP_002346040.1;transl_table=11
NC_003143.1	RefSeq	gene	1107355	1108035	.	+	.	ID=gene949;Name=YPO0996;Dbxref=GeneID:1173834;gbkey=Gene;locus_tag=YPO0996
NC_003143.1	RefSeq	CDS	1107355	1108035	.	+	0	ID=cds912;Name=YP_002346041.2;Parent=gene949;Dbxref=InterPro:IPR002514,InterPro:IPR009057,UniProtKB%2FTrEMBL:Q7CKI7,Genbank:YP_002346041.2,GeneID:1173834;gbkey=CDS;product=insertion element IS1661 DNA-binding protein;protein_id=YP_002346041.2;transl_table=11
NC_003143.1	RefSeq	region	1107456	1108917	.	+	.	ID=id673;Note=IS1397-like insertion element: IS1661;gbkey=misc_feature
NC_003143.1	RefSeq	repeat_region	1107456	1107487	.	+	.	ID=id674;Note=Inverted repeat for IS1661 insertion element;Dbxref=GeneID:1173834;gbkey=repeat_region
NC_003143.1	RefSeq	region	1107577	1107642	.	+	.	ID=id675;Note=Predicted helix-turn-helix motif with score 1691 %28%2B4.95 SD%29 at aa 75-96%2C sequence ATLRETARQFSVGKSPLTRWIR;Dbxref=GeneID:1173834;gbkey=misc_feature
NC_003143.1	RefSeq	gene	1108089	1108874	.	+	.	ID=gene950;Name=YPO0997;Dbxref=GeneID:1173835;gbkey=Gene;locus_tag=YPO0997
NC_003143.1	RefSeq	CDS	1108089	1108874	.	+	0	ID=cds913;Name=YP_002346042.1;Parent=gene950;Dbxref=InterPro:IPR001584,InterPro:IPR012337,UniProtKB%2FTrEMBL:Q7CKI6,Genbank:YP_002346042.1,GeneID:1173835;gbkey=CDS;product=transposase for insertion sequence IS1661;protein_id=YP_002346042.1;transl_table=11
NC_003143.1	RefSeq	repeat_region	1108883	1108917	.	-	.	ID=id676;Note=Inverted repeat for IS1661 insertion element;gbkey=repeat_region
NC_003143.1	RefSeq	gene	1109070	1111436	.	-	.	ID=gene951;Name=YPO0998;Dbxref=GeneID:1173836;gbkey=Gene;locus_tag=YPO0998
NC_003143.1	RefSeq	CDS	1109070	1111436	.	-	0	ID=cds914;Name=YP_002346043.1;Parent=gene951;Dbxref=InterPro:IPR000014,InterPro:IPR000160,InterPro:IPR001610,InterPro:IPR001633,InterPro:IPR007892,InterPro:IPR013767,UniProtKB%2FTrEMBL:Q7CGN3,Genbank:YP_002346043.1,GeneID:1173836;gbkey=CDS;product=hypothetical protein;protein_id=YP_002346043.1;transl_table=11
NC_003143.1	RefSeq	region	1110783	1110848	.	-	.	ID=id677;Note=1 probable transmembrane helix predicted;Dbxref=GeneID:1173836;gbkey=misc_feature
NC_003143.1	RefSeq	gene	1111440	1111637	.	-	.	ID=gene952;Name=YPO0999;Dbxref=GeneID:1173837;gbkey=Gene;locus_tag=YPO0999
NC_003143.1	RefSeq	CDS	1111440	1111637	.	-	0	ID=cds915;Name=YP_002346044.1;Parent=gene952;Dbxref=UniProtKB%2FTrEMBL:Q0WI44,Genbank:YP_002346044.1,GeneID:1173837;gbkey=CDS;product=hypothetical protein;protein_id=YP_002346044.1;transl_table=11
NC_003143.1	RefSeq	region	1111500	1111565	.	-	.	ID=id678;Note=1 probable transmembrane helix predicted;Dbxref=GeneID:1173837;gbkey=misc_feature
NC_003143.1	RefSeq	gene	1112076	1113353	.	+	.	ID=gene953;Name=YPO1000;Dbxref=GeneID:1173838;gbkey=Gene;locus_tag=YPO1000
NC_003143.1	RefSeq	CDS	1112076	1113353	.	+	0	ID=cds916;Name=YP_002346045.1;Parent=gene953;Dbxref=InterPro:IPR006143,UniProtKB%2FTrEMBL:Q7CGN2,Genbank:YP_002346045.1,GeneID:1173838;gbkey=CDS;product=drug efflux protein;protein_id=YP_002346045.1;transl_table=11
NC_003143.1	RefSeq	region	1112199	1112267	.	+	.	ID=id679;Note=1 probable transmembrane helix predicted;Dbxref=GeneID:1173838;gbkey=misc_feature
NC_003143.1	RefSeq	gene	1113366	1116485	.	+	.	ID=gene954;Name=YPO1001;Dbxref=GeneID:1173839;gbkey=Gene;locus_tag=YPO1001
NC_003143.1	RefSeq	CDS	1113366	1116485	.	+	0	ID=cds917;Name=YP_002346046.1;Parent=gene954;Dbxref=InterPro:IPR000731,InterPro:IPR001036,InterPro:IPR001977,InterPro:IPR004764,UniProtKB%2FTrEMBL:Q7CGN1,Genbank:YP_002346046.1,GeneID:1173839;gbkey=CDS;product=integral membrane efflux protein;protein_id=YP_002346046.1;transl_table=11
NC_003143.1	RefSeq	gene	1116620	1118110	.	-	.	ID=gene955;Name=YPO1002;Dbxref=GeneID:1173840;gbkey=Gene;locus_tag=YPO1002
NC_003143.1	RefSeq	CDS	1116620	1118110	.	-	0	ID=cds918;Name=YP_002346047.1;Parent=gene955;Dbxref=InterPro:IPR012927,UniProtKB%2FTrEMBL:Q7CGN0,Genbank:YP_002346047.1,GeneID:1173840;gbkey=CDS;product=enterotoxin-like protein;protein_id=YP_002346047.1;transl_table=11
NC_003143.1	RefSeq	gene	1118388	1118975	.	+	.	ID=gene956;Name=YPO1003;Dbxref=GeneID:1173841;gbkey=Gene;locus_tag=YPO1003
NC_003143.1	RefSeq	CDS	1118388	1118975	.	+	0	ID=cds919;Name=YP_002346048.1;Parent=gene956;Dbxref=UniProtKB%2FTrEMBL:Q7CGM9,Genbank:YP_002346048.1,GeneID:1173841;gbkey=CDS;product=hypothetical protein;protein_id=YP_002346048.1;transl_table=11
NC_003143.1	RefSeq	gene	1119829	1130946	.	+	.	ID=gene957;Name=yapH;Dbxref=GeneID:1173842;gbkey=Gene;gene=yapH;locus_tag=YPO1004
NC_003143.1	RefSeq	CDS	1119829	1130946	.	+	0	ID=cds920;Name=YP_002346049.1;Parent=gene957;Dbxref=InterPro:IPR004899,InterPro:IPR005546,InterPro:IPR006315,InterPro:IPR011049,InterPro:IPR011050,InterPro:IPR013425,UniProtKB%2FTrEMBL:Q0WI39,Genbank:YP_002346049.1,GeneID:1173842;gbkey=CDS;gene=yapH;product=autotransporter protein;protein_id=YP_002346049.1;transl_table=11
NC_003143.1	RefSeq	gene	1131049	1132929	.	-	.	ID=gene958;Name=YPO1005;Dbxref=GeneID:1173843;gbkey=Gene;locus_tag=YPO1005
NC_003143.1	RefSeq	CDS	1131049	1132929	.	-	0	ID=cds921;Name=YP_002346050.1;Parent=gene958;Dbxref=InterPro:IPR001611,UniProtKB%2FTrEMBL:Q7CGM8,Genbank:YP_002346050.1,GeneID:1173843;gbkey=CDS;product=hypothetical protein;protein_id=YP_002346050.1;transl_table=11
NC_003143.1	RefSeq	gene	1133492	1134367	.	-	.	ID=gene959;Name=YPO1006;Dbxref=GeneID:1173844;gbkey=Gene;locus_tag=YPO1006
NC_003143.1	RefSeq	CDS	1133492	1134367	.	-	0	ID=cds922;Name=YP_002346051.1;Parent=gene959;Dbxref=InterPro:IPR001611,UniProtKB%2FTrEMBL:Q7CGM7,Genbank:YP_002346051.1,GeneID:1173844;gbkey=CDS;product=hypothetical protein;protein_id=YP_002346051.1;transl_table=11
NC_003143.1	RefSeq	gene	1134575	1136392	.	-	.	ID=gene960;Name=YPO1007;Dbxref=GeneID:1173845;gbkey=Gene;locus_tag=YPO1007
NC_003143.1	RefSeq	CDS	1134575	1136392	.	-	0	ID=cds923;Name=YP_002346052.1;Parent=gene960;Dbxref=InterPro:IPR001611,UniProtKB%2FTrEMBL:Q7CGM6,Genbank:YP_002346052.1,GeneID:1173845;gbkey=CDS;product=hypothetical protein;protein_id=YP_002346052.1;transl_table=11
NC_003143.1	RefSeq	gene	1137111	1138667	.	+	.	ID=gene961;Name=YPO1008;Dbxref=GeneID:1173846;gbkey=Gene;locus_tag=YPO1008
NC_003143.1	RefSeq	CDS	1137111	1138667	.	+	0	ID=cds924;Name=YP_002346053.1;Parent=gene961;Dbxref=InterPro:IPR004697,UniProtKB%2FTrEMBL:Q74QP2,Genbank:YP_002346053.1,GeneID:1173846;gbkey=CDS;product=integral membrane efflux protein;protein_id=YP_002346053.1;transl_table=11
NC_003143.1	RefSeq	gene	1138745	1139977	.	+	.	ID=gene962;Name=YPO1009;Dbxref=GeneID:1173847;gbkey=Gene;locus_tag=YPO1009
NC_003143.1	RefSeq	CDS	1138745	1139977	.	+	0	ID=cds925;Name=YP_002346054.1;Parent=gene962;Note=catalyzes the release of the N-terminal amino acid from a tripeptide;Dbxref=InterPro:IPR001261,InterPro:IPR002933,InterPro:IPR010161,InterPro:IPR011650,UniProtKB%2FTrEMBL:Q0WI34,Genbank:YP_002346054.1,GeneID:1173847;gbkey=CDS;product=peptidase T;protein_id=YP_002346054.1;transl_table=11
NC_003143.1	RefSeq	gene	1140365	1142437	.	+	.	ID=gene963;Name=YPO1011;Dbxref=GeneID:1173848;gbkey=Gene;locus_tag=YPO1011
NC_003143.1	RefSeq	CDS	1140365	1142437	.	+	0	ID=cds926;Name=YP_002346055.1;Parent=gene963;Dbxref=InterPro:IPR000531,InterPro:IPR010916,InterPro:IPR012910,UniProtKB%2FTrEMBL:Q74QP1,Genbank:YP_002346055.1,GeneID:1173848;gbkey=CDS;product=TonB-dependent outer membrane receptor;protein_id=YP_002346055.1;transl_table=11
NC_003143.1	RefSeq	region	1140365	1140487	.	+	.	ID=id680;Note=PS00430 TonB-dependent receptor proteins signature 1.;Dbxref=GeneID:1173848;gbkey=misc_feature
NC_003143.1	RefSeq	gene	1142588	1146001	.	+	.	ID=gene964;Name=YPO1012;Dbxref=GeneID:1173849;gbkey=Gene;locus_tag=YPO1012
NC_003143.1	RefSeq	CDS	1142588	1146001	.	+	0	ID=cds927;Name=YP_008479687.1;Parent=gene964;Dbxref=Genbank:YP_008479687.1,GeneID:1173849;gbkey=CDS;product=nonribosomal peptide synthetase%2Fpolyketide synthase;protein_id=YP_008479687.1;transl_table=11
NC_003143.1	RefSeq	region	1142618	1145928	.	+	.	ID=id681;Note=This CDS is disrupted by the insertion of IS100 element. Similar to regions of polyketide synthases%2Fpeptide synthetases eg. Bacillus subtilis MycA TR:Q9R9J1 %28EMBL:AF184956%29 %283971 aa%29 fasta scores: E%28%29: 0%2C 29.5%25 id in 1112 aa%2C Streptomyces coelicolor polyketide synthase SC3f7.12 TR:O54155 %28EMBL:AL021409%29 %282297 aa%29 fasta scores: E%28%29: 0%2C 31.1%25 id in 1199 aa and Sorangium cellulosum polyketide synthase EpoC TR:Q9L8C7 %28EMBL:AF210843%29 %287257 aa%29 fasta scores: E%28%29: 0%2C 39.3%25 id in 499 aa.;Dbxref=GeneID:1173849;gbkey=misc_feature;pseudo=true
NC_003143.1	RefSeq	region	1145081	1145131	.	+	.	ID=id682;Note=PS00606 Beta-ketoacyl synthases active site.;Dbxref=GeneID:1173849;gbkey=misc_feature
NC_003143.1	RefSeq	repeat_region	1145929	1147882	.	+	.	ID=id683;Note=insertion sequence:IS100;gbkey=repeat_region
NC_003143.1	RefSeq	repeat_region	1145929	1145956	.	+	.	ID=id684;Note=IS100 inverted repeat;Dbxref=GeneID:1173849;gbkey=repeat_region
NC_003143.1	RefSeq	gene	1146015	1147037	.	+	.	ID=gene965;Name=y1093;Dbxref=GeneID:1173850;gbkey=Gene;gene=y1093;gene_synonym=ypmt1;locus_tag=YPO1013
NC_003143.1	RefSeq	CDS	1146015	1147037	.	+	0	ID=cds928;Name=YP_002346056.1;Parent=gene965;Dbxref=InterPro:IPR001584,InterPro:IPR006120,InterPro:IPR009057,InterPro:IPR012287,InterPro:IPR012337,UniProtKB%2FTrEMBL:Q7ARN5,Genbank:YP_002346056.1,GeneID:1173850;gbkey=CDS;gene=y1093;product=transposase for insertion sequence IS100;protein_id=YP_002346056.1;transl_table=11
NC_003143.1	RefSeq	region	1146066	1146131	.	+	.	ID=id685;Note=Predicted helix-turn-helix motif with score 2147 %28%2B6.50 SD%29 at aa 18-39%2C sequence MSSRAIARELGISRNTVKRYLQ;Dbxref=GeneID:1173850;gbkey=misc_feature;gene=y1093
NC_003143.1	RefSeq	gene	1147034	1147816	.	+	.	ID=gene966;Name=YPO1014;Note=ypmt1.57c;Dbxref=GeneID:1173851;gbkey=Gene;locus_tag=YPO1014
NC_003143.1	RefSeq	CDS	1147034	1147816	.	+	0	ID=cds929;Name=YP_002346057.1;Parent=gene966;Dbxref=InterPro:IPR001270,InterPro:IPR002611,InterPro:IPR003593,UniProtKB%2FTrEMBL:Q7ARK4,Genbank:YP_002346057.1,GeneID:1173851;gbkey=CDS;product=transposase%2FIS protein;protein_id=YP_002346057.1;transl_table=11
NC_003143.1	RefSeq	region	1147361	1147384	.	+	.	ID=id686;Note=PS00017 ATP%2FGTP-binding site motif A %28P-loop%29.;Dbxref=GeneID:1173851;gbkey=misc_feature
NC_003143.1	RefSeq	repeat_region	1147855	1147882	.	-	.	ID=id687;Note=IS100 inverted repeat;gbkey=repeat_region
NC_003143.1	RefSeq	gene	1148051	1148659	.	+	.	ID=gene967;Name=YPO1015;Dbxref=GeneID:1173853;gbkey=Gene;locus_tag=YPO1015
NC_003143.1	RefSeq	CDS	1148051	1148659	.	+	0	ID=cds930;Name=YP_002346059.1;Parent=gene967;Dbxref=InterPro:IPR001120,InterPro:IPR012902,UniProtKB%2FTrEMBL:Q7CGZ7,Genbank:YP_002346059.1,GeneID:1173853;gbkey=CDS;product=hypothetical protein;protein_id=YP_002346059.1;transl_table=11
NC_003143.1	RefSeq	region	1148108	1148170	.	+	.	ID=id688;Note=PS00409 Prokaryotic N-terminal methylation site.;Dbxref=GeneID:1173853;gbkey=misc_feature
NC_003143.1	RefSeq	gene	1148656	1149126	.	+	.	ID=gene968;Name=YPO1016;Dbxref=GeneID:1173854;gbkey=Gene;locus_tag=YPO1016
NC_003143.1	RefSeq	CDS	1148656	1149126	.	+	0	ID=cds931;Name=YP_002346060.1;Parent=gene968;Dbxref=UniProtKB%2FTrEMBL:Q7CGZ8,Genbank:YP_002346060.1,GeneID:1173854;gbkey=CDS;product=hypothetical protein;protein_id=YP_002346060.1;transl_table=11
NC_003143.1	RefSeq	region	1148683	1148742	.	+	.	ID=id689;Note=1 probable transmembrane helix predicted;Dbxref=GeneID:1173854;gbkey=misc_feature
NC_003143.1	RefSeq	gene	1149114	1149524	.	+	.	ID=gene969;Name=YPO1017;Dbxref=GeneID:1173855;gbkey=Gene;locus_tag=YPO1017
NC_003143.1	RefSeq	CDS	1149114	1149524	.	+	0	ID=cds932;Name=YP_002346061.1;Parent=gene969;Dbxref=InterPro:IPR001120,UniProtKB%2FTrEMBL:Q7CGZ9,Genbank:YP_002346061.1,GeneID:1173855;gbkey=CDS;product=prepilin peptidase dependent protein;protein_id=YP_002346061.1;transl_table=11
NC_003143.1	RefSeq	region	1149192	1149254	.	+	.	ID=id690;Note=PS00409 Prokaryotic N-terminal methylation site.;Dbxref=GeneID:1173855;gbkey=misc_feature
NC_003143.1	RefSeq	region	1149198	1149266	.	+	.	ID=id691;Note=1 probable transmembrane helix predicted;Dbxref=GeneID:1173855;gbkey=misc_feature
NC_003143.1	RefSeq	gene	1149659	1153030	.	+	.	ID=gene970;Name=recC;Dbxref=GeneID:1173856;gbkey=Gene;gene=recC;locus_tag=YPO1018
NC_003143.1	RefSeq	CDS	1149659	1153030	.	+	0	ID=cds933;Name=YP_002346062.1;Parent=gene970;Note=catalyzes ATP-dependent exonucleolytic cleavage in either 5%27- to 3%27- or 3%27- to 5%27-direction to yield 5%27-phosphooligonucleotides%3B component of the RecBCD %28Exo V%29 helicase%2Fnuclease complex that is essential for recombination;Dbxref=InterPro:IPR006697,UniProtKB%2FTrEMBL:Q74RY3,Genbank:YP_002346062.1,GeneID:1173856;gbkey=CDS;gene=recC;product=exonuclease V subunit gamma;protein_id=YP_002346062.1;transl_table=11
NC_003143.1	RefSeq	gene	1153112	1156000	.	+	.	ID=gene971;Name=ptr;Dbxref=GeneID:1173857;gbkey=Gene;gene=ptr;gene_synonym=ptrA;locus_tag=YPO1019
NC_003143.1	RefSeq	CDS	1153112	1156000	.	+	0	ID=cds934;Name=YP_002346063.1;Parent=gene971;Dbxref=InterPro:IPR001431,InterPro:IPR007863,InterPro:IPR011765,UniProtKB%2FTrEMBL:Q7CH00,Genbank:YP_002346063.1,GeneID:1173857;gbkey=CDS;gene=ptr;product=protease III;protein_id=YP_002346063.1;transl_table=11
NC_003143.1	RefSeq	region	1153340	1153411	.	+	.	ID=id692;Note=PS00143 Insulinase family%2C zinc-binding region signature.;Dbxref=GeneID:1173857;gbkey=misc_feature;gene=ptr
NC_003143.1	RefSeq	gene	1155997	1159659	.	+	.	ID=gene972;Name=recB;Dbxref=GeneID:1173858;gbkey=Gene;gene=recB;gene_synonym=rorA;locus_tag=YPO1020
NC_003143.1	RefSeq	CDS	1155997	1159659	.	+	0	ID=cds935;Name=YP_002346064.1;Parent=gene972;Note=helicase%2Fnuclease%3B with RecCD catalyzes the exonucleolytic cleavage of DNA%3B RecD has 5%27 to 3%27 helicase activity;Dbxref=InterPro:IPR000212,InterPro:IPR004586,InterPro:IPR014016,InterPro:IPR014017,UniProtKB%2FTrEMBL:Q0WI24,Genbank:YP_002346064.1,GeneID:1173858;gbkey=CDS;gene=recB;product=exonuclease V subunit beta;protein_id=YP_002346064.1;transl_table=11
NC_003143.1	RefSeq	region	1156066	1156089	.	+	.	ID=id693;Note=PS00017 ATP%2FGTP-binding site motif A %28P-loop%29.;Dbxref=GeneID:1173858;gbkey=misc_feature;gene=recB
NC_003143.1	RefSeq	gene	1159656	1161614	.	+	.	ID=gene973;Name=recD;Dbxref=GeneID:1173859;gbkey=Gene;gene=recD;locus_tag=YPO1021
NC_003143.1	RefSeq	CDS	1159656	1161614	.	+	0	ID=cds936;Name=YP_002346065.1;Parent=gene973;Note=helicase%2Fnuclease%3B with RecBC catalyzes the exonucleolytic cleavage of DNA%3B RecD has 5%27 to 3%27 helicase activity;Dbxref=InterPro:IPR003593,InterPro:IPR006344,UniProtKB%2FTrEMBL:Q7CH01,Genbank:YP_002346065.1,GeneID:1173859;gbkey=CDS;gene=recD;product=exonuclease V subunit alpha;protein_id=YP_002346065.1;transl_table=11
NC_003143.1	RefSeq	region	1160223	1160246	.	+	.	ID=id694;Note=PS00017 ATP%2FGTP-binding site motif A %28P-loop%29.;Dbxref=GeneID:1173859;gbkey=misc_feature;gene=recD
NC_003143.1	RefSeq	gene	1161769	1163094	.	-	.	ID=gene974;Name=argA;Dbxref=GeneID:1173860;gbkey=Gene;gene=argA;locus_tag=YPO1022
NC_003143.1	RefSeq	CDS	1161769	1163094	.	-	0	ID=cds937;Name=YP_002346066.1;Parent=gene974;Note=catalyzes the formation of N-acetyl-L-glutamate from L-glutamate and acetyl-CoA in arginine biosynthesis;Dbxref=InterPro:IPR000182,InterPro:IPR001048,InterPro:IPR010167,UniProtKB%2FTrEMBL:Q0WI22,Genbank:YP_002346066.1,GeneID:1173860;gbkey=CDS;gene=argA;product=N-acetylglutamate synthase;protein_id=YP_002346066.1;transl_table=11
NC_003143.1	RefSeq	gene	1163330	1164580	.	+	.	ID=gene975;Name=YPO1023;Dbxref=GeneID:1173861;gbkey=Gene;locus_tag=YPO1023
NC_003143.1	RefSeq	CDS	1163330	1164580	.	+	0	ID=cds938;Name=YP_002346067.1;Parent=gene975;Dbxref=InterPro:IPR002508,UniProtKB%2FTrEMBL:Q0WI21,Genbank:YP_002346067.1,GeneID:1173861;gbkey=CDS;product=N-acetylmuramoyl-L-alanine amidase;protein_id=YP_002346067.1;transl_table=11
NC_003143.1	RefSeq	gene	1164810	1164886	.	-	.	ID=gene976;Name=YPt_08;Dbxref=GeneID:1173862;gbkey=Gene;locus_tag=YPt_08
NC_003143.1	RefSeq	tRNA	1164810	1164886	.	-	.	ID=rna13;Parent=gene976;Note=tRNA Met anticodon CAT%2C Cove score 86.07;Dbxref=GeneID:1173862;gbkey=tRNA;product=tRNA-Met
NC_003143.1	RefSeq	exon	1164810	1164886	.	-	.	ID=id695;Parent=rna13;Note=tRNA Met anticodon CAT%2C Cove score 86.07;Dbxref=GeneID:1173862;gbkey=tRNA;product=tRNA-Met
NC_003143.1	RefSeq	gene	1165010	1165086	.	-	.	ID=gene977;Name=YPt_09;Dbxref=GeneID:1173863;gbkey=Gene;locus_tag=YPt_09
NC_003143.1	RefSeq	tRNA	1165010	1165086	.	-	.	ID=rna14;Parent=gene977;Note=tRNA Met anticodon CAT%2C Cove score 86.07;Dbxref=GeneID:1173863;gbkey=tRNA;product=tRNA-Met
NC_003143.1	RefSeq	exon	1165010	1165086	.	-	.	ID=id696;Parent=rna14;Note=tRNA Met anticodon CAT%2C Cove score 86.07;Dbxref=GeneID:1173863;gbkey=tRNA;product=tRNA-Met
NC_003143.1	RefSeq	gene	1165302	1166474	.	+	.	ID=gene978;Name=mltA;Dbxref=GeneID:1173864;gbkey=Gene;gene=mltA;locus_tag=YPO1025
NC_003143.1	RefSeq	CDS	1165302	1166474	.	+	0	ID=cds939;Name=YP_002346068.1;Parent=gene978;Note=membrane-bound%2C lytic%3B catalyzes the cleavage of the beta-1%2C4-glycosidic bond between N-acetylmuramic acid and N-acetylglucosamine residues;Dbxref=InterPro:IPR005300,InterPro:IPR010611,UniProtKB%2FTrEMBL:Q7CH02,Genbank:YP_002346068.1,GeneID:1173864;gbkey=CDS;gene=mltA;product=murein transglycosylase A;protein_id=YP_002346068.1;transl_table=11
NC_003143.1	RefSeq	region	1165332	1165364	.	+	.	ID=id697;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site.;Dbxref=GeneID:1173864;gbkey=misc_feature;gene=mltA
NC_003143.1	RefSeq	gene	1166617	1167444	.	+	.	ID=gene979;Name=YPO1026;Dbxref=GeneID:1173865;gbkey=Gene;locus_tag=YPO1026
NC_003143.1	RefSeq	CDS	1166617	1167444	.	+	0	ID=cds940;Name=YP_002346069.1;Parent=gene979;Dbxref=InterPro:IPR000594,InterPro:IPR009036,UniProtKB%2FTrEMBL:Q7CH03,Genbank:YP_002346069.1,GeneID:1173865;gbkey=CDS;product=hypothetical protein;protein_id=YP_002346069.1;transl_table=11
NC_003143.1	RefSeq	region	1167319	1167387	.	+	.	ID=id698;Note=1 probable transmembrane helix predicted;Dbxref=GeneID:1173865;gbkey=misc_feature
NC_003143.1	RefSeq	gene	1167480	1167923	.	-	.	ID=gene980;Name=YPO1027;Dbxref=GeneID:1173866;gbkey=Gene;locus_tag=YPO1027
NC_003143.1	RefSeq	CDS	1167480	1167923	.	-	0	ID=cds941;Name=YP_002346070.1;Parent=gene980;Dbxref=InterPro:IPR003808,UniProtKB%2FTrEMBL:Q7CH04,Genbank:YP_002346070.1,GeneID:1173866;gbkey=CDS;product=hypothetical protein;protein_id=YP_002346070.1;transl_table=11
NC_003143.1	RefSeq	gene	1168058	1169377	.	-	.	ID=gene981;Name=YPO1028;Dbxref=GeneID:1173867;gbkey=Gene;locus_tag=YPO1028
NC_003143.1	RefSeq	CDS	1168058	1169377	.	-	0	ID=cds942;Name=YP_002346071.1;Parent=gene981;Dbxref=InterPro:IPR000192,UniProtKB%2FTrEMBL:Q0WI17,Genbank:YP_002346071.1,GeneID:1173867;gbkey=CDS;product=cysteine sulfinate desulfinase;protein_id=YP_002346071.1;transl_table=11
NC_003143.1	RefSeq	region	1168568	1168627	.	-	.	ID=id699;Note=PS00595 Aminotransferases class-V pyridoxal-phosphate attachment site.;Dbxref=GeneID:1173867;gbkey=misc_feature
NC_003143.1	RefSeq	gene	1169923	1170840	.	+	.	ID=gene982;Name=gcvA;Dbxref=GeneID:1173868;gbkey=Gene;gene=gcvA;locus_tag=YPO1029
NC_003143.1	RefSeq	CDS	1169923	1170840	.	+	0	ID=cds943;Name=YP_002346072.1;Parent=gene982;Note=Glycine cleavage system transcriptional activator%3B activates the gcvTHP operon in the presence of glycine and represses the operon in its absence;Dbxref=InterPro:IPR000847,InterPro:IPR005119,UniProtKB%2FTrEMBL:Q7CH05,Genbank:YP_002346072.1,GeneID:1173868;gbkey=CDS;gene=gcvA;product=DNA-binding transcriptional activator GcvA;protein_id=YP_002346072.1;transl_table=11
NC_003143.1	RefSeq	region	1169983	1170048	.	+	.	ID=id700;Note=Predicted helix-turn-helix motif with score 1894 %28%2B5.64 SD%29 at aa 21-42%2C sequence LSFTKAAEELFVTQAAVSHQIK;Dbxref=GeneID:1173868;gbkey=misc_feature;gene=gcvA
NC_003143.1	RefSeq	region	1169986	1170078	.	+	.	ID=id701;Note=PS00044 Bacterial regulatory proteins%2C lysR family signature.;Dbxref=GeneID:1173868;gbkey=misc_feature;gene=gcvA
NC_003143.1	RefSeq	gene	1171006	1171401	.	+	.	ID=gene983;Name=YPO1030;Dbxref=GeneID:1173869;gbkey=Gene;locus_tag=YPO1030
NC_003143.1	RefSeq	CDS	1171006	1171401	.	+	0	ID=cds944;Name=YP_002346073.1;Parent=gene983;Dbxref=InterPro:IPR006696,UniProtKB%2FTrEMBL:Q0WI15,Genbank:YP_002346073.1,GeneID:1173869;gbkey=CDS;product=hypothetical protein;protein_id=YP_002346073.1;transl_table=11
NC_003143.1	RefSeq	gene	1171394	1172500	.	+	.	ID=gene984;Name=YPO1031;Dbxref=GeneID:1173870;gbkey=Gene;locus_tag=YPO1031
NC_003143.1	RefSeq	CDS	1171394	1172500	.	+	0	ID=cds945;Name=YP_002346074.1;Parent=gene984;Dbxref=InterPro:IPR011024,InterPro:IPR011224,UniProtKB%2FTrEMBL:Q0WI14,Genbank:YP_002346074.1,GeneID:1173870;gbkey=CDS;product=RNA 2%27-O-ribose methyltransferase;protein_id=YP_002346074.1;transl_table=11
NC_003143.1	RefSeq	gene	1172751	1173506	.	-	.	ID=gene985;Name=xni;Dbxref=GeneID:1173871;gbkey=Gene;gene=xni;locus_tag=YPO1032
NC_003143.1	RefSeq	CDS	1172751	1173506	.	-	0	ID=cds946;Name=YP_002346075.1;Parent=gene985;Note=has 3%27-5%27 exonuclease activity that preferentially acts on ssDNA%3B also 3%27-phosphodiesterase activity at sites with 3%27 incised apurinic%2Fapyrimidinic sites%3B can remove 3%27 phosphoglycolate groups;Dbxref=InterPro:IPR002421,InterPro:IPR008918,UniProtKB%2FTrEMBL:Q7CH07,Genbank:YP_002346075.1,GeneID:1173871;gbkey=CDS;gene=xni;product=exonuclease IX;protein_id=YP_002346075.1;transl_table=11
NC_003143.1	RefSeq	gene	1173766	1175130	.	-	.	ID=gene986;Name=YPO1033;Dbxref=GeneID:1173872;gbkey=Gene;locus_tag=YPO1033
NC_003143.1	RefSeq	CDS	1173766	1175130	.	-	0	ID=cds947;Name=YP_002346076.1;Parent=gene986;Dbxref=InterPro:IPR005269,UniProtKB%2FTrEMBL:Q7CH10,Genbank:YP_002346076.1,GeneID:1173872;gbkey=CDS;product=hypothetical protein;protein_id=YP_002346076.1;transl_table=11
NC_003143.1	RefSeq	gene	1175283	1176128	.	-	.	ID=gene987;Name=queF;Dbxref=GeneID:1173873;gbkey=Gene;gene=queF;locus_tag=YPO1034
NC_003143.1	RefSeq	CDS	1175283	1176128	.	-	0	ID=cds948;Name=YP_002346077.1;Parent=gene987;Note=catalyzes the NADPH-dependent reduction of 7-cyano-7-deazaguanine %28preQ0%29 to 7-aminomethyl-7-deazaguanine %28preQ1%29 in queuosine biosynthesis;Dbxref=InterPro:IPR001474,UniProtKB%2FTrEMBL:Q0WI11,Genbank:YP_002346077.1,GeneID:1173873;gbkey=CDS;gene=queF;product=7-cyano-7-deazaguanine reductase;protein_id=YP_002346077.1;transl_table=11
NC_003143.1	RefSeq	gene	1176266	1176811	.	+	.	ID=gene988;Name=syd;Dbxref=GeneID:1173874;gbkey=Gene;gene=syd;gene_synonym=ydr;locus_tag=YPO1035
NC_003143.1	RefSeq	CDS	1176266	1176811	.	+	0	ID=cds949;Name=YP_002346078.1;Parent=gene988;Note=SecY regulator that either chelates excess SecY or negatively regulates the SecYE translocase function;Dbxref=InterPro:IPR009948,UniProtKB%2FTrEMBL:Q0WI10,Genbank:YP_002346078.1,GeneID:1173874;gbkey=CDS;gene=syd;product=SecY interacting protein Syd;protein_id=YP_002346078.1;transl_table=11
NC_003143.1	RefSeq	gene	1177074	1177355	.	+	.	ID=gene989;Name=csrB;Dbxref=GeneID:1173875;gbkey=Gene;gene=csrB;locus_tag=YPOs03
NC_003143.1	RefSeq	ncRNA	1177074	1177355	.	+	.	ID=rna15;Parent=gene989;Note=Similar to Escherichia coli regulatory RNA csrB%2C 62%25 identity in 283 nt overlap;Dbxref=GeneID:1173875;gbkey=ncRNA;gene=csrB;ncrna_class=other;product=CsrB
NC_003143.1	RefSeq	exon	1177074	1177355	.	+	.	ID=id702;Parent=rna15;Note=Similar to Escherichia coli regulatory RNA csrB%2C 62%25 identity in 283 nt overlap;Dbxref=GeneID:1173875;gbkey=ncRNA;gene=csrB;ncrna_class=other;product=CsrB
NC_003143.1	RefSeq	repeat_region	1177356	1178067	.	+	.	ID=id703;Note=Contains a %27G%27 at nucleotide position 315%7EIS200-like insertion sequence:IS1541;gbkey=repeat_region
NC_003143.1	RefSeq	gene	1177501	1177959	.	+	.	ID=gene990;Name=tnp;Dbxref=GeneID:1173876;gbkey=Gene;gene=tnp;locus_tag=YPO1036
NC_003143.1	RefSeq	CDS	1177501	1177959	.	+	0	ID=cds950;Name=YP_002346079.1;Parent=gene990;Dbxref=InterPro:IPR002686,UniProtKB%2FTrEMBL:Q74YM6,Genbank:YP_002346079.1,GeneID:1173876;gbkey=CDS;gene=tnp;product=transposase for the IS1541 insertion element;protein_id=YP_002346079.1;transl_table=11
NC_003143.1	RefSeq	gene	1178213	1178545	.	+	.	ID=gene991;Name=YPO1037;Dbxref=GeneID:1173877;gbkey=Gene;locus_tag=YPO1037
NC_003143.1	RefSeq	CDS	1178213	1178545	.	+	0	ID=cds951;Name=YP_002346080.1;Parent=gene991;Dbxref=InterPro:IPR007384,UniProtKB%2FTrEMBL:Q0WI08,Genbank:YP_002346080.1,GeneID:1173877;gbkey=CDS;product=hypothetical protein;protein_id=YP_002346080.1;transl_table=11
NC_003143.1	RefSeq	gene	1178545	1179318	.	+	.	ID=gene992;Name=YPO1038;Dbxref=GeneID:1173878;gbkey=Gene;locus_tag=YPO1038
NC_003143.1	RefSeq	CDS	1178545	1179318	.	+	0	ID=cds952;Name=YP_002346081.1;Parent=gene992;Note=catalyzes formation of pseudouridine at position 65 in tRNA-Ile1 and tRNA-Asp;Dbxref=InterPro:IPR006145,InterPro:IPR006224,UniProtKB%2FTrEMBL:Q0WI07,Genbank:YP_002346081.1,GeneID:1173878;gbkey=CDS;product=tRNA pseudouridine synthase C;protein_id=YP_002346081.1;transl_table=11
NC_003143.1	RefSeq	region	1178692	1178736	.	+	.	ID=id704;Note=PS01129 Rlu family of pseudouridine synthase signature.;Dbxref=GeneID:1173878;gbkey=misc_feature
NC_003143.1	RefSeq	gene	1179346	1179795	.	+	.	ID=gene993;Name=YPO1039;Dbxref=GeneID:1173879;gbkey=Gene;locus_tag=YPO1039
NC_003143.1	RefSeq	CDS	1179346	1179795	.	+	0	ID=cds953;Name=YP_002346082.1;Parent=gene993;Note=An electron-transfer protein%3B flavodoxin binds one FMN molecule%2C which serves as a redox-active prosthetic group;Dbxref=InterPro:IPR001094,InterPro:IPR008254,UniProtKB%2FTrEMBL:Q7CH13,Genbank:YP_002346082.1,GeneID:1173879;gbkey=CDS;product=flavodoxin;protein_id=YP_002346082.1;transl_table=11
NC_003143.1	RefSeq	gene	1179885	1180274	.	-	.	ID=gene994;Name=YPO1040;Dbxref=GeneID:1173880;gbkey=Gene;locus_tag=YPO1040
NC_003143.1	RefSeq	CDS	1179885	1180274	.	-	0	ID=cds954;Name=YP_002346083.1;Parent=gene994;Dbxref=InterPro:IPR002661,UniProtKB%2FTrEMBL:Q0WI05,Genbank:YP_002346083.1,GeneID:1173880;gbkey=CDS;product=hypothetical protein;protein_id=YP_002346083.1;transl_table=11
NC_003143.1	RefSeq	gene	1180398	1181222	.	-	.	ID=gene995;Name=dapD;Dbxref=GeneID:1173881;gbkey=Gene;gene=dapD;locus_tag=YPO1041
NC_003143.1	RefSeq	CDS	1180398	1181222	.	-	0	ID=cds955;Name=YP_002346084.1;Parent=gene995;Note=catalyzes the formation of N-succinyl-2-amino-6-ketopimelate from succinyl-CoA and tetrahydrodipicolinate in the lysine biosynthetic pathway;Dbxref=InterPro:IPR001451,InterPro:IPR005664,InterPro:IPR011004,UniProtKB%2FTrEMBL:Q0WI04,Genbank:YP_002346084.1,GeneID:1173881;gbkey=CDS;gene=dapD;product=2%2C3%2C4%2C5-tetrahydropyridine-2%2C6-carboxylate N-succinyltransferase;protein_id=YP_002346084.1;transl_table=11
NC_003143.1	RefSeq	region	1180737	1180823	.	-	.	ID=id705;Note=PS00101 Hexapeptide-repeat containing-transferases signature.;Dbxref=GeneID:1173881;gbkey=misc_feature;gene=dapD
NC_003143.1	RefSeq	gene	1181397	1184135	.	-	.	ID=gene996;Name=glnD;Dbxref=GeneID:1173882;gbkey=Gene;gene=glnD;locus_tag=YPO1042
NC_003143.1	RefSeq	CDS	1181397	1184135	.	-	0	ID=cds956;Name=YP_002346085.1;Parent=gene996;Note=catalyzes the uridylylation or deuridylylation of the PII nitrogen regulatory protein;Dbxref=InterPro:IPR002912,InterPro:IPR002934,InterPro:IPR003607,InterPro:IPR006674,InterPro:IPR010043,InterPro:IPR013546,UniProtKB%2FTrEMBL:Q0WI03,Genbank:YP_002346085.1,GeneID:1173882;gbkey=CDS;gene=glnD;product=PII uridylyl-transferase;protein_id=YP_002346085.1;transl_table=11
NC_003143.1	RefSeq	gene	1184138	1184929	.	-	.	ID=gene997;Name=ampM;Dbxref=GeneID:1173883;gbkey=Gene;gene=ampM;gene_synonym=b0168,map;locus_tag=YPO1043
NC_003143.1	RefSeq	CDS	1184138	1184929	.	-	0	ID=cds957;Name=YP_002346086.1;Parent=gene997;Note=catalyzes the removal of N-terminal amino acids from peptides and arylamides%3B generally Co%28II%29 however activity has been shown for some methionine aminopeptidases with Zn%2C Fe%2C or Mn;Dbxref=InterPro:IPR000994,InterPro:IPR001714,InterPro:IPR002467,UniProtKB%2FTrEMBL:Q7CH15,Genbank:YP_002346086.1,GeneID:1173883;gbkey=CDS;gene=ampM;product=methionine aminopeptidase;protein_id=YP_002346086.1;transl_table=11
NC_003143.1	RefSeq	region	1184372	1184428	.	-	.	ID=id706;Note=PS00680 Methionine aminopeptidase subfamily 1 signature.;Dbxref=GeneID:1173883;gbkey=misc_feature;gene=ampM
NC_003143.1	RefSeq	gene	1185364	1186089	.	+	.	ID=gene998;Name=rpsB;Dbxref=GeneID:1173884;gbkey=Gene;gene=rpsB;locus_tag=YPO1044
NC_003143.1	RefSeq	CDS	1185364	1186089	.	+	0	ID=cds958;Name=YP_002346087.1;Parent=gene998;Note=one of the last subunits in the assembly of the 30S subunit%3B absence of S2 does not inhibit assembly but results in an inactive subunit;Dbxref=InterPro:IPR001865,InterPro:IPR005706,UniProtKB%2FTrEMBL:Q0WI01,Genbank:YP_002346087.1,GeneID:1173884;gbkey=CDS;gene=rpsB;product=30S ribosomal protein S2;protein_id=YP_002346087.1;transl_table=11
NC_003143.1	RefSeq	region	1185379	1185414	.	+	.	ID=id707;Note=PS00962 Ribosomal protein S2 signature 1.;Dbxref=GeneID:1173884;gbkey=misc_feature;gene=rpsB
NC_003143.1	RefSeq	region	1185835	1185909	.	+	.	ID=id708;Note=PS00963 Ribosomal protein S2 signature 2.;Dbxref=GeneID:1173884;gbkey=misc_feature;gene=rpsB
NC_003143.1	RefSeq	gene	1186217	1187074	.	+	.	ID=gene999;Name=tsf;Dbxref=GeneID:1173885;gbkey=Gene;gene=tsf;locus_tag=YPO1045
NC_003143.1	RefSeq	CDS	1186217	1187074	.	+	0	ID=cds959;Name=YP_002346088.1;Parent=gene999;Note=EF-Ts%3B functions during elongation stage of protein translation%3B forms a dimer%3B associates with EF-Tu-GDP complex and promotes exchange of GDP to GTP resulting in regeneration of the active form of EF-Tu;Dbxref=InterPro:IPR000449,InterPro:IPR001816,InterPro:IPR009060,UniProtKB%2FTrEMBL:Q0WI00,Genbank:YP_002346088.1,GeneID:1173885;gbkey=CDS;gene=tsf;product=elongation factor Ts;protein_id=YP_002346088.1;transl_table=11
NC_003143.1	RefSeq	region	1186445	1186477	.	+	.	ID=id709;Note=PS01127 Elongation factor Ts signature 2.;Dbxref=GeneID:1173885;gbkey=misc_feature;gene=tsf
NC_003143.1	RefSeq	gene	1187283	1188008	.	+	.	ID=gene1000;Name=pyrH;Dbxref=GeneID:1173886;gbkey=Gene;gene=pyrH;gene_synonym=smbA;locus_tag=YPO1046
NC_003143.1	RefSeq	CDS	1187283	1188008	.	+	0	ID=cds960;Name=YP_002346089.1;Parent=gene1000;Note=Catalyzes the phosphorylation of UMP to UDP;Dbxref=InterPro:IPR001048,InterPro:IPR011817,UniProtKB%2FTrEMBL:Q0WHZ9,Genbank:YP_002346089.1,GeneID:1173886;gbkey=CDS;gene=pyrH;product=uridylate kinase;protein_id=YP_002346089.1;transl_table=11
NC_003143.1	RefSeq	gene	1188144	1188701	.	+	.	ID=gene1001;Name=frr;Dbxref=GeneID:1173887;gbkey=Gene;gene=frr;gene_synonym=rrf;locus_tag=YPO1047
NC_003143.1	RefSeq	CDS	1188144	1188701	.	+	0	ID=cds961;Name=YP_002346090.1;Parent=gene1001;Note=Rrf%3B Frr%3B ribosome-recycling factor%3B release factor 4%3B RF4%3B recycles ribosomes upon translation termination along with release factor RF-3 and elongation factor EF-G%3B A GTPase-dependent process results in release of 50S from 70S%3B inhibited by release factor RF-1%3B essential for viability%3B structurally similar to tRNAs;Dbxref=InterPro:IPR002661,UniProtKB%2FTrEMBL:Q0WHZ8,Genbank:YP_002346090.1,GeneID:1173887;gbkey=CDS;gene=frr;product=ribosome recycling factor;protein_id=YP_002346090.1;transl_table=11
NC_003143.1	RefSeq	gene	1188915	1190111	.	+	.	ID=gene1002;Name=dxr;Dbxref=GeneID:1173888;gbkey=Gene;gene=dxr;locus_tag=YPO1048
NC_003143.1	RefSeq	CDS	1188915	1190111	.	+	0	ID=cds962;Name=YP_002346091.1;Parent=gene1002;Note=catalyzes the NADP-dependent rearrangement and reduction of 1-deoxy-D-xylulose-5-phosphate %28DXP%29 to 2-C-methyl-D-erythritol 4-phosphate;Dbxref=InterPro:IPR003821,InterPro:IPR013512,InterPro:IPR013644,UniProtKB%2FTrEMBL:Q0WHZ7,Genbank:YP_002346091.1,GeneID:1173888;gbkey=CDS;gene=dxr;product=1-deoxy-D-xylulose 5-phosphate reductoisomerase;protein_id=YP_002346091.1;transl_table=11
NC_003143.1	RefSeq	gene	1190335	1191093	.	+	.	ID=gene1003;Name=rth;Dbxref=GeneID:1173889;gbkey=Gene;gene=rth;gene_synonym=uppS;locus_tag=YPO1049
NC_003143.1	RefSeq	CDS	1190335	1191093	.	+	0	ID=cds963;Name=YP_002346092.1;Parent=gene1003;Note=catalyzes the formation of undecaprenyl pyrophosphate from isopentenyl pyrophosphate;Dbxref=InterPro:IPR001441,UniProtKB%2FTrEMBL:Q0WHZ6,Genbank:YP_002346092.1,GeneID:1173889;gbkey=CDS;gene=rth;product=undecaprenyl pyrophosphate synthase;protein_id=YP_002346092.1;transl_table=11
NC_003143.1	RefSeq	region	1190896	1190949	.	+	.	ID=id710;Note=PS01066 Undecaprenyl pyrophosphate synthetase family signature.;Dbxref=GeneID:1173889;gbkey=misc_feature;gene=rth
NC_003143.1	RefSeq	gene	1191103	1191951	.	+	.	ID=gene1004;Name=cdsA;Dbxref=GeneID:1173890;gbkey=Gene;gene=cdsA;locus_tag=YPO1050
NC_003143.1	RefSeq	CDS	1191103	1191951	.	+	0	ID=cds964;Name=YP_002346093.1;Parent=gene1004;Note=catalyzes the synthesis of CDP-diglyceride from CTP and phosphatidate;Dbxref=InterPro:IPR000374,UniProtKB%2FTrEMBL:Q7CH16,Genbank:YP_002346093.1,GeneID:1173890;gbkey=CDS;gene=cdsA;product=CDP-diglyceride synthase;protein_id=YP_002346093.1;transl_table=11
NC_003143.1	RefSeq	region	1191817	1191897	.	+	.	ID=id711;Note=PS01315 Phosphatidate cytidylyltransferase signature.;Dbxref=GeneID:1173890;gbkey=misc_feature;gene=cdsA
NC_003143.1	RefSeq	gene	1191980	1193335	.	+	.	ID=gene1005;Name=YPO1051;Dbxref=GeneID:1173891;gbkey=Gene;locus_tag=YPO1051
NC_003143.1	RefSeq	CDS	1191980	1193335	.	+	0	ID=cds965;Name=YP_002346094.1;Parent=gene1005;Note=catalyzes the cleavage of RseA which activates the sigmaE-mediated stress response;Dbxref=InterPro:IPR001478,InterPro:IPR004387,InterPro:IPR006025,InterPro:IPR008915,UniProtKB%2FTrEMBL:Q0WHZ4,Genbank:YP_002346094.1,GeneID:1173891;gbkey=CDS;product=zinc metallopeptidase RseP;protein_id=YP_002346094.1;transl_table=11
NC_003143.1	RefSeq	region	1192034	1192063	.	+	.	ID=id712;Note=PS00142 Neutral zinc metallopeptidases%2C zinc-binding region signature.;Dbxref=GeneID:1173891;gbkey=misc_feature
NC_003143.1	RefSeq	gene	1193372	1195759	.	+	.	ID=gene1006;Name=YPO1052;Dbxref=GeneID:1173892;gbkey=Gene;locus_tag=YPO1052
NC_003143.1	RefSeq	CDS	1193372	1195759	.	+	0	ID=cds966;Name=YP_002346095.1;Parent=gene1006;Note=part of a complex with YfgL%2C YfiO%2C and NlpB involved in outer membrane protein biosynthesis%3B involved in the assembly of outer membrane proteins;Dbxref=InterPro:IPR000184,InterPro:IPR010827,UniProtKB%2FTrEMBL:Q0WHZ3,Genbank:YP_002346095.1,GeneID:1173892;gbkey=CDS;product=outer membrane protein assembly factor YaeT;protein_id=YP_002346095.1;transl_table=11
NC_003143.1	RefSeq	region	1193390	1193449	.	+	.	ID=id713;Note=1 probable transmembrane helix predicted;Dbxref=GeneID:1173892;gbkey=misc_feature
NC_003143.1	RefSeq	gene	1195917	1196414	.	+	.	ID=gene1007;Name=ompH;Dbxref=GeneID:1173893;gbkey=Gene;gene=ompH;locus_tag=YPO1053
NC_003143.1	RefSeq	CDS	1195917	1196414	.	+	0	ID=cds967;Name=YP_002346096.1;Parent=gene1007;Dbxref=InterPro:IPR005632,UniProtKB%2FTrEMBL:Q0WHZ2,Genbank:YP_002346096.1,GeneID:1173893;gbkey=CDS;gene=ompH;product=periplasmic chaperone;protein_id=YP_002346096.1;transl_table=11
NC_003143.1	RefSeq	gene	1196418	1197440	.	+	.	ID=gene1008;Name=lpxD;Dbxref=GeneID:1173894;gbkey=Gene;gene=lpxD;gene_synonym=omsA;locus_tag=YPO1054
NC_003143.1	RefSeq	CDS	1196418	1197440	.	+	0	ID=cds968;Name=YP_002346097.1;Parent=gene1008;Note=adds the O-linked and N-linked 3%28R%29-hydroxy fatty acids to the glucosamine disaccharide during lipid A biosynthesis;Dbxref=InterPro:IPR001451,InterPro:IPR007691,InterPro:IPR011004,UniProtKB%2FTrEMBL:Q0WHZ1,Genbank:YP_002346097.1,GeneID:1173894;gbkey=CDS;gene=lpxD;product=UDP-3-O-%5B3-hydroxymyristoyl%5D glucosamine N-acyltransferase;protein_id=YP_002346097.1;transl_table=11
NC_003143.1	RefSeq	region	1196715	1196801	.	+	.	ID=id714;Note=PS00101 Hexapeptide-repeat containing-transferases signature.;Dbxref=GeneID:1173894;gbkey=misc_feature;gene=lpxD
NC_003143.1	RefSeq	region	1196805	1196891	.	+	.	ID=id715;Note=PS00101 Hexapeptide-repeat containing-transferases signature.;Dbxref=GeneID:1173894;gbkey=misc_feature;gene=lpxD
NC_003143.1	RefSeq	region	1197090	1197176	.	+	.	ID=id716;Note=PS00101 Hexapeptide-repeat containing-transferases signature.;Dbxref=GeneID:1173894;gbkey=misc_feature;gene=lpxD
NC_003143.1	RefSeq	gene	1197598	1198143	.	+	.	ID=gene1009;Name=fabZ;Dbxref=GeneID:1173895;gbkey=Gene;gene=fabZ;gene_synonym=sefA;locus_tag=YPO1055
NC_003143.1	RefSeq	CDS	1197598	1198143	.	+	0	ID=cds969;Name=YP_002346098.1;Parent=gene1009;Note=in Pseudomonas aeruginosa this enzyme is a trimer of dimers%3B essential for membrane formation%3B performs third step of type II fatty acid biosynthesis%3B catalyzes dehydration of %283R%29-hydroxyacyl-ACP to trans-2-acyl-ACP;Dbxref=InterPro:IPR010084,InterPro:IPR013114,UniProtKB%2FTrEMBL:Q0WHZ0,Genbank:YP_002346098.1,GeneID:1173895;gbkey=CDS;gene=fabZ;product=%283R%29-hydroxymyristoyl-ACP dehydratase;protein_id=YP_002346098.1;transl_table=11
NC_003143.1	RefSeq	gene	1198147	1198935	.	+	.	ID=gene1010;Name=lpxA;Dbxref=GeneID:1173896;gbkey=Gene;gene=lpxA;locus_tag=YPO1056
NC_003143.1	RefSeq	CDS	1198147	1198935	.	+	0	ID=cds970;Name=YP_002346099.1;Parent=gene1010;Note=catalyzes the addition of %28R%29-3-hydroxytetradecanoyl to the glucosamine disaccharide in lipid A biosynthesis;Dbxref=InterPro:IPR001451,InterPro:IPR010137,InterPro:IPR011004,UniProtKB%2FTrEMBL:Q0WHY9,Genbank:YP_002346099.1,GeneID:1173896;gbkey=CDS;gene=lpxA;product=UDP-N-acetylglucosamine acyltransferase;protein_id=YP_002346099.1;transl_table=11
NC_003143.1	RefSeq	region	1198204	1198290	.	+	.	ID=id717;Note=PS00101 Hexapeptide-repeat containing-transferases signature.;Dbxref=GeneID:1173896;gbkey=misc_feature;gene=lpxA
NC_003143.1	RefSeq	region	1198603	1198689	.	+	.	ID=id718;Note=PS00101 Hexapeptide-repeat containing-transferases signature.;Dbxref=GeneID:1173896;gbkey=misc_feature;gene=lpxA
NC_003143.1	RefSeq	gene	1198939	1200123	.	+	.	ID=gene1011;Name=lpxB;Dbxref=GeneID:1173897;gbkey=Gene;gene=lpxB;gene_synonym=pgsB;locus_tag=YPO1057
NC_003143.1	RefSeq	CDS	1198939	1200123	.	+	0	ID=cds971;Name=YP_002346100.1;Parent=gene1011;Note=catalyzes the formation of lipid A disaccharide from UDP-2%2C3-diacylglucosamine and 2%2C3-diacylglucosamine-1-phosphate%2C lipid A disaccharide is a precursor of lipid A that anchors LPS to the OM;Dbxref=InterPro:IPR003835,UniProtKB%2FTrEMBL:Q0WHY8,Genbank:YP_002346100.1,GeneID:1173897;gbkey=CDS;gene=lpxB;product=lipid-A-disaccharide synthase;protein_id=YP_002346100.1;transl_table=11
NC_003143.1	RefSeq	gene	1200120	1200716	.	+	.	ID=gene1012;Name=rnhB;Dbxref=GeneID:1173898;gbkey=Gene;gene=rnhB;locus_tag=YPO1058
NC_003143.1	RefSeq	CDS	1200120	1200716	.	+	0	ID=cds972;Name=YP_002346101.1;Parent=gene1012;Note=RNH2%3B RNase HII%3B binds manganese%3B endonuclease which specifically degrades the RNA of RNA-DNA hybrids;Dbxref=InterPro:IPR001352,InterPro:IPR012337,UniProtKB%2FTrEMBL:Q0WHY7,Genbank:YP_002346101.1,GeneID:1173898;gbkey=CDS;gene=rnhB;product=ribonuclease HII;protein_id=YP_002346101.1;transl_table=11
NC_003143.1	RefSeq	gene	1200846	1204361	.	+	.	ID=gene1013;Name=dnaE;Dbxref=GeneID:1173899;gbkey=Gene;gene=dnaE;gene_synonym=polC;locus_tag=YPO1059
NC_003143.1	RefSeq	CDS	1200846	1204361	.	+	0	ID=cds973;Name=YP_002346102.1;Parent=gene1013;Note=catalyzes DNA-template-directed extension of the 3%27- end of a DNA strand by one nucleotide at a time%3B main replicative polymerase;Dbxref=InterPro:IPR003141,InterPro:IPR004013,InterPro:IPR004365,InterPro:IPR004805,InterPro:IPR008994,InterPro:IPR011708,InterPro:IPR012340,UniProtKB%2FTrEMBL:Q7CH18,Genbank:YP_002346102.1,GeneID:1173899;gbkey=CDS;gene=dnaE;product=DNA polymerase III subunit alpha;protein_id=YP_002346102.1;transl_table=11
NC_003143.1	RefSeq	gene	1204374	1205333	.	+	.	ID=gene1014;Name=accA;Dbxref=GeneID:1173900;gbkey=Gene;gene=accA;locus_tag=YPO1060
NC_003143.1	RefSeq	CDS	1204374	1205333	.	+	0	ID=cds974;Name=YP_002346103.1;Parent=gene1014;Note=catalyzes the carboxylation of acetyl-CoA to malonyl-CoA%3B forms a tetramer composed of two alpha %28AccA%29 and two beta %28AccD%29 subunits%3B one of the two catalytic subunits that can form the acetyl CoA carboxylase enzyme together with a carrier protein;Dbxref=InterPro:IPR001095,InterPro:IPR011763,UniProtKB%2FTrEMBL:Q0WHY5,Genbank:YP_002346103.1,GeneID:1173900;gbkey=CDS;gene=accA;product=acetyl-CoA carboxylase carboxyltransferase subunit alpha;protein_id=YP_002346103.1;transl_table=11
NC_003143.1	RefSeq	gene	1205517	1205915	.	+	.	ID=gene1015;Name=YPO1061;Dbxref=GeneID:1173901;gbkey=Gene;locus_tag=YPO1061
NC_003143.1	RefSeq	CDS	1205517	1205915	.	+	0	ID=cds975;Name=YP_002346104.1;Parent=gene1015;Dbxref=InterPro:IPR004360,InterPro:IPR011588,UniProtKB%2FTrEMBL:Q7CH20,Genbank:YP_002346104.1,GeneID:1173901;gbkey=CDS;product=hypothetical protein;protein_id=YP_002346104.1;transl_table=11
NC_003143.1	RefSeq	gene	1205917	1207299	.	+	.	ID=gene1016;Name=tilS;Dbxref=GeneID:1173902;gbkey=Gene;gene=tilS;locus_tag=YPO1062
NC_003143.1	RefSeq	CDS	1205917	1207299	.	+	0	ID=cds976;Name=YP_002346105.1;Parent=gene1016;Note=Ligates lysine onto the cytidine present at position 34 of the AUA codon-specific tRNA%28Ile%29 that contains the anticodon CAU%3B ATP-dependent%3B responsible for modifying the wobble-base of the CAU anticodon of tRNAIle such that it exhibits proper recognition of the AUA codon rather than the AUG codon and is in turn properly recognized by isoleucyl-tRNA synthetase;Dbxref=InterPro:IPR011063,InterPro:IPR012094,InterPro:IPR012795,InterPro:IPR012796,UniProtKB%2FTrEMBL:Q0WHY3,Genbank:YP_002346105.1,GeneID:1173902;gbkey=CDS;gene=tilS;product=tRNA%28Ile%29-lysidine synthetase;protein_id=YP_002346105.1;transl_table=11
NC_003143.1	RefSeq	gene	1207536	1207853	.	+	.	ID=gene1017;Name=YPO1063;Dbxref=GeneID:1173903;gbkey=Gene;locus_tag=YPO1063
NC_003143.1	RefSeq	CDS	1207536	1207853	.	+	0	ID=cds977;Name=YP_002346106.1;Parent=gene1017;Dbxref=InterPro:IPR003088,InterPro:IPR008168,InterPro:IPR008169,InterPro:IPR009056,InterPro:IPR012282,UniProtKB%2FTrEMBL:Q7CH22,Genbank:YP_002346106.1,GeneID:1173903;gbkey=CDS;product=cytochrome;protein_id=YP_002346106.1;transl_table=11
NC_003143.1	RefSeq	region	1207638	1207655	.	+	.	ID=id719;Note=PS00190 Cytochrome c family heme-binding site signature.;Dbxref=GeneID:1173903;gbkey=misc_feature
NC_003143.1	RefSeq	gene	1208118	1208378	.	-	.	ID=gene1018;Name=YPO1064;Dbxref=GeneID:1173904;gbkey=Gene;locus_tag=YPO1064
NC_003143.1	RefSeq	CDS	1208118	1208378	.	-	0	ID=cds978;Name=YP_002346107.1;Parent=gene1018;Note=Suppresses temperature-sensitive mutations in essential genes by modulating rho-dependent transcription termination;Dbxref=InterPro:IPR009778,UniProtKB%2FTrEMBL:Q7CH23,Genbank:YP_002346107.1,GeneID:1173904;gbkey=CDS;product=Rho-binding antiterminator;protein_id=YP_002346107.1;transl_table=11
NC_003143.1	RefSeq	gene	1208365	1208565	.	-	.	ID=gene1019;Name=YPO1064a;Dbxref=GeneID:1173905;gbkey=Gene;locus_tag=YPO1064a
NC_003143.1	RefSeq	CDS	1208365	1208565	.	-	0	ID=cds979;Name=YP_002346108.1;Parent=gene1019;Dbxref=InterPro:IPR009624,UniProtKB%2FTrEMBL:Q0WHY0,Genbank:YP_002346108.1,GeneID:1173905;gbkey=CDS;product=hypothetical protein;protein_id=YP_002346108.1;transl_table=11
NC_003143.1	RefSeq	gene	1208807	1209355	.	+	.	ID=gene1020;Name=YPO1065;Dbxref=GeneID:1173906;gbkey=Gene;locus_tag=YPO1065
NC_003143.1	RefSeq	CDS	1208807	1209355	.	+	0	ID=cds980;Name=YP_002346109.1;Parent=gene1020;Dbxref=InterPro:IPR009822,UniProtKB%2FTrEMBL:Q0WHX9,Genbank:YP_002346109.1,GeneID:1173906;gbkey=CDS;product=hypothetical protein;protein_id=YP_002346109.1;transl_table=11
NC_003143.1	RefSeq	gene	1209358	1209774	.	+	.	ID=gene1021;Name=YPO1066;Dbxref=GeneID:1173907;gbkey=Gene;locus_tag=YPO1066
NC_003143.1	RefSeq	CDS	1209358	1209774	.	+	0	ID=cds981;Name=YP_002346110.1;Parent=gene1021;Dbxref=InterPro:IPR000352,UniProtKB%2FTrEMBL:Q0WHX8,Genbank:YP_002346110.1,GeneID:1173907;gbkey=CDS;product=peptidyl-tRNA hydrolase domain-containing protein;protein_id=YP_002346110.1;transl_table=11
NC_003143.1	RefSeq	gene	1209814	1210542	.	+	.	ID=gene1022;Name=cutF;Dbxref=GeneID:1173908;gbkey=Gene;gene=cutF;gene_synonym=nlpE;locus_tag=YPO1067
NC_003143.1	RefSeq	CDS	1209814	1210542	.	+	0	ID=cds982;Name=YP_002346111.1;Parent=gene1022;Dbxref=InterPro:IPR007298,UniProtKB%2FTrEMBL:Q7CH24,Genbank:YP_002346111.1,GeneID:1173908;gbkey=CDS;gene=cutF;product=lipoprotein involved with copper homeostasis and adhesion;protein_id=YP_002346111.1;transl_table=11
NC_003143.1	RefSeq	region	1209886	1209918	.	+	.	ID=id720;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site.;Dbxref=GeneID:1173908;gbkey=misc_feature;gene=cutF
NC_003143.1	RefSeq	gene	1210676	1212394	.	-	.	ID=gene1023;Name=proS;Dbxref=GeneID:1173909;gbkey=Gene;gene=proS;locus_tag=YPO1068
NC_003143.1	RefSeq	CDS	1210676	1212394	.	-	0	ID=cds983;Name=YP_002346112.1;Parent=gene1023;Note=catalyzes the formation of prolyl-tRNA%28Pro%29 from proline and tRNA%28Pro%29;Dbxref=InterPro:IPR002314,InterPro:IPR002316,InterPro:IPR004154,InterPro:IPR004500,InterPro:IPR006195,InterPro:IPR007214,UniProtKB%2FSwiss-Prot:Q7CH25,UniProtKB%2FTrEMBL:Q7CH25,Genbank:YP_002346112.1,GeneID:1173909;gbkey=CDS;gene=proS;product=prolyl-tRNA synthetase;protein_id=YP_002346112.1;transl_table=11
NC_003143.1	RefSeq	region	1211918	1211980	.	-	.	ID=id721;Note=PS00179 Aminoacyl-transfer RNA synthetases class-II signature 1.;Dbxref=GeneID:1173909;gbkey=misc_feature;gene=proS
NC_003143.1	RefSeq	gene	1212498	1213205	.	-	.	ID=gene1024;Name=YPO1069;Dbxref=GeneID:1173910;gbkey=Gene;locus_tag=YPO1069
NC_003143.1	RefSeq	CDS	1212498	1213205	.	-	0	ID=cds984;Name=YP_002346113.1;Parent=gene1024;Dbxref=InterPro:IPR001378,UniProtKB%2FTrEMBL:Q7CH26,Genbank:YP_002346113.1,GeneID:1173910;gbkey=CDS;product=hypothetical protein;protein_id=YP_002346113.1;transl_table=11
NC_003143.1	RefSeq	region	1212912	1212947	.	-	.	ID=id722;Note=PS01318 Uncharacterized protein family UPF0066 signature.;Dbxref=GeneID:1173910;gbkey=misc_feature
NC_003143.1	RefSeq	gene	1213202	1213609	.	-	.	ID=gene1025;Name=rcsF;Dbxref=GeneID:1173911;gbkey=Gene;gene=rcsF;locus_tag=YPO1070
NC_003143.1	RefSeq	CDS	1213202	1213609	.	-	0	ID=cds985;Name=YP_002346114.1;Parent=gene1025;Dbxref=UniProtKB%2FTrEMBL:Q7CH27,Genbank:YP_002346114.1,GeneID:1173911;gbkey=CDS;gene=rcsF;product=outer membrane lipoprotein;protein_id=YP_002346114.1;transl_table=11
NC_003143.1	RefSeq	region	1213562	1213594	.	-	.	ID=id723;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site.;Dbxref=GeneID:1173911;gbkey=misc_feature;gene=rcsF
NC_003143.1	RefSeq	gene	1213727	1214542	.	-	.	ID=gene1026;Name=metQ;Dbxref=GeneID:1173912;gbkey=Gene;gene=metQ;locus_tag=YPO1071
NC_003143.1	RefSeq	CDS	1213727	1214542	.	-	0	ID=cds986;Name=YP_002346115.1;Parent=gene1026;Dbxref=InterPro:IPR004478,InterPro:IPR004872,UniProtKB%2FTrEMBL:Q0WHX3,Genbank:YP_002346115.1,GeneID:1173912;gbkey=CDS;gene=metQ;product=DL-methionine transporter substrate-binding subunit;protein_id=YP_002346115.1;transl_table=11
NC_003143.1	RefSeq	region	1214474	1214506	.	-	.	ID=id724;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site.;Dbxref=GeneID:1173912;gbkey=misc_feature;gene=metQ
NC_003143.1	RefSeq	gene	1214606	1215259	.	-	.	ID=gene1027;Name=YPO1072;Dbxref=GeneID:1173913;gbkey=Gene;locus_tag=YPO1072
NC_003143.1	RefSeq	CDS	1214606	1215259	.	-	0	ID=cds987;Name=YP_002346116.1;Parent=gene1027;Note=part of the MetNIQ methionine uptake system;Dbxref=InterPro:IPR000515,UniProtKB%2FTrEMBL:Q0WHX2,Genbank:YP_002346116.1,GeneID:1173913;gbkey=CDS;product=DL-methionine transporter permease;protein_id=YP_002346116.1;transl_table=11
NC_003143.1	RefSeq	region	1214840	1214926	.	-	.	ID=id725;Note=PS00402 Binding-protein-dependent transport systems inner membrane comp. sign.;Dbxref=GeneID:1173913;gbkey=misc_feature
NC_003143.1	RefSeq	gene	1215252	1216283	.	-	.	ID=gene1028;Name=metN;Dbxref=GeneID:1173914;gbkey=Gene;gene=metN;locus_tag=YPO1073
NC_003143.1	RefSeq	CDS	1215252	1216283	.	-	0	ID=cds988;Name=YP_002346117.1;Parent=gene1028;Note=part of the metNIQ transport system for methionine;Dbxref=InterPro:IPR003439,InterPro:IPR003593,InterPro:IPR012692,UniProtKB%2FTrEMBL:Q0WHX1,Genbank:YP_002346117.1,GeneID:1173914;gbkey=CDS;gene=metN;product=DL-methionine transporter ATP-binding protein;protein_id=YP_002346117.1;transl_table=11
NC_003143.1	RefSeq	region	1215819	1215863	.	-	.	ID=id726;Note=PS00211 ABC transporters family signature.;Dbxref=GeneID:1173914;gbkey=misc_feature;gene=metN
NC_003143.1	RefSeq	region	1216149	1216172	.	-	.	ID=id727;Note=PS00017 ATP%2FGTP-binding site motif A %28P-loop%29.;Dbxref=GeneID:1173914;gbkey=misc_feature;gene=metN
NC_003143.1	RefSeq	gene	1216470	1217036	.	+	.	ID=gene1029;Name=YPO1074;Dbxref=GeneID:1173915;gbkey=Gene;locus_tag=YPO1074
NC_003143.1	RefSeq	CDS	1216470	1217036	.	+	0	ID=cds989;Name=YP_002346118.1;Parent=gene1029;Note=Converts the D-glycero-beta-D-manno-heptose 1%2C7-bisphosphate intermediate into D-glycero-beta-D-manno-heptose 1-phosphate;Dbxref=InterPro:IPR004446,InterPro:IPR005834,InterPro:IPR006543,InterPro:IPR006549,UniProtKB%2FTrEMBL:Q0WHX0,Genbank:YP_002346118.1,GeneID:1173915;gbkey=CDS;product=D%2CD-heptose 1%2C7-bisphosphate phosphatase;protein_id=YP_002346118.1;transl_table=11
NC_003143.1	RefSeq	gene	1217287	1217472	.	-	.	ID=gene1030;Name=YPO1074a;Dbxref=GeneID:16744743;gbkey=Gene;locus_tag=YPO1074a
NC_003143.1	RefSeq	CDS	1217287	1217472	.	-	0	ID=cds990;Name=YP_008479688.1;Parent=gene1030;Dbxref=Genbank:YP_008479688.1,GeneID:16744743;gbkey=CDS;product=hypothetical protein;protein_id=YP_008479688.1;transl_table=11
NC_003143.1	RefSeq	gene	1217505	1218993	.	+	.	ID=gene1031;Name=YPOr04;Dbxref=GeneID:1173916;gbkey=Gene;locus_tag=YPOr04
NC_003143.1	RefSeq	rRNA	1217505	1218993	.	+	.	ID=rna16;Parent=gene1031;Note=match to 16S_rRNA 1..1489   %28EMBL:YPE16SA%29;Dbxref=GeneID:1173916;gbkey=rRNA;product=16S ribosomal RNA
NC_003143.1	RefSeq	exon	1217505	1218993	.	+	.	ID=id728;Parent=rna16;Note=match to 16S_rRNA 1..1489   %28EMBL:YPE16SA%29;Dbxref=GeneID:1173916;gbkey=rRNA;product=16S ribosomal RNA
NC_003143.1	RefSeq	gene	1219157	1219232	.	+	.	ID=gene1032;Name=YPt_10;Dbxref=GeneID:1173917;gbkey=Gene;locus_tag=YPt_10
NC_003143.1	RefSeq	tRNA	1219157	1219232	.	+	.	ID=rna17;Parent=gene1032;Note=tRNA Glu anticodon TTC%2C Cove score 56.95;Dbxref=GeneID:1173917;gbkey=tRNA;product=tRNA-Glu
NC_003143.1	RefSeq	exon	1219157	1219232	.	+	.	ID=id729;Parent=rna17;Note=tRNA Glu anticodon TTC%2C Cove score 56.95;Dbxref=GeneID:1173917;gbkey=tRNA;product=tRNA-Glu
NC_003143.1	RefSeq	gene	1219485	1222391	.	+	.	ID=gene1033;Name=YPOr05;Dbxref=GeneID:1173918;gbkey=Gene;locus_tag=YPOr05
NC_003143.1	RefSeq	rRNA	1219485	1222391	.	+	.	ID=rna18;Parent=gene1033;Note=match to 23S_rRNA 1..2906 %28Y. enterocolitica 23S EMBL:U77925%29;Dbxref=GeneID:1173918;gbkey=rRNA;product=23S ribosomal RNA
NC_003143.1	RefSeq	exon	1219485	1222391	.	+	.	ID=id730;Parent=rna18;Note=match to 23S_rRNA 1..2906 %28Y. enterocolitica 23S EMBL:U77925%29;Dbxref=GeneID:1173918;gbkey=rRNA;product=23S ribosomal RNA
NC_003143.1	RefSeq	gene	1222501	1222616	.	+	.	ID=gene1034;Name=YPOr06;Dbxref=GeneID:1173919;gbkey=Gene;locus_tag=YPOr06
NC_003143.1	RefSeq	rRNA	1222501	1222616	.	+	.	ID=rna19;Parent=gene1034;Note=match to 5SrRNA 1..234  blast score 1131  percent identity 98  %28incl. 23S-5S spacer%29;Dbxref=GeneID:1173919;gbkey=rRNA;product=5S ribosomal RNA
NC_003143.1	RefSeq	exon	1222501	1222616	.	+	.	ID=id731;Parent=rna19;Note=match to 5SrRNA 1..234  blast score 1131  percent identity 98  %28incl. 23S-5S spacer%29;Dbxref=GeneID:1173919;gbkey=rRNA;product=5S ribosomal RNA
NC_003143.1	RefSeq	gene	1222742	1222818	.	+	.	ID=gene1035;Name=YPt_11;Dbxref=GeneID:1173920;gbkey=Gene;locus_tag=YPt_11
NC_003143.1	RefSeq	tRNA	1222742	1222818	.	+	.	ID=rna20;Parent=gene1035;Note=tRNA Asp anticodon GTC%2C Cove score 90.47;Dbxref=GeneID:1173920;gbkey=tRNA;product=tRNA-Asp
NC_003143.1	RefSeq	exon	1222742	1222818	.	+	.	ID=id732;Parent=rna20;Note=tRNA Asp anticodon GTC%2C Cove score 90.47;Dbxref=GeneID:1173920;gbkey=tRNA;product=tRNA-Asp
NC_003143.1	RefSeq	gene	1223177	1223980	.	+	.	ID=gene1036;Name=dkgB;Dbxref=GeneID:1173921;gbkey=Gene;gene=dkgB;locus_tag=YPO1075
NC_003143.1	RefSeq	CDS	1223177	1223980	.	+	0	ID=cds991;Name=YP_002346119.1;Parent=gene1036;Note=catalyzes the reduction of 2%2C5-diketo-D-gluconic acid to 2-keto-L-gulonic acid;Dbxref=InterPro:IPR001395,UniProtKB%2FTrEMBL:Q0WHW9,Genbank:YP_002346119.1,GeneID:1173921;gbkey=CDS;gene=dkgB;product=2%2C5-diketo-D-gluconate reductase B;protein_id=YP_002346119.1;transl_table=11
NC_003143.1	RefSeq	region	1223261	1223314	.	+	.	ID=id733;Note=PS00798 Aldo%2Fketo reductase family signature 1.;Dbxref=GeneID:1173921;gbkey=misc_feature;gene=dkgB
NC_003143.1	RefSeq	region	1223516	1223569	.	+	.	ID=id734;Note=PS00062 Aldo%2Fketo reductase family signature 2.;Dbxref=GeneID:1173921;gbkey=misc_feature;gene=dkgB
NC_003143.1	RefSeq	gene	1224015	1224479	.	+	.	ID=gene1037;Name=YPO1076;Dbxref=GeneID:1173922;gbkey=Gene;locus_tag=YPO1076
NC_003143.1	RefSeq	CDS	1224015	1224479	.	+	0	ID=cds992;Name=YP_002346120.1;Parent=gene1037;Note=no significant database hits;Dbxref=UniProtKB%2FTrEMBL:Q74S63,Genbank:YP_002346120.1,GeneID:1173922;gbkey=CDS;product=hypothetical protein;protein_id=YP_002346120.1;transl_table=11
NC_003143.1	RefSeq	gene	1224840	1225622	.	+	.	ID=gene1038;Name=YPO1077;Dbxref=GeneID:1173923;gbkey=Gene;locus_tag=YPO1077
NC_003143.1	RefSeq	CDS	1224840	1225622	.	+	0	ID=cds993;Name=YP_002346121.1;Parent=gene1038;Dbxref=InterPro:IPR005135,UniProtKB%2FTrEMBL:Q0WHW7,Genbank:YP_002346121.1,GeneID:1173923;gbkey=CDS;product=hypothetical protein;protein_id=YP_002346121.1;transl_table=11
NC_003143.1	RefSeq	gene	1225664	1227091	.	-	.	ID=gene1039;Name=mltD;Dbxref=GeneID:1173924;gbkey=Gene;gene=mltD;locus_tag=YPO1078
NC_003143.1	RefSeq	CDS	1225664	1227091	.	-	0	ID=cds994;Name=YP_002346122.1;Parent=gene1039;Note=catalyzes the cleavage of the beta-1%2C4-glycosidic bond between N-acetylmuramic acid and N-acetylglucosamine residues%3B may play a role in recycling muropeptides during cell division and%2For cell elongation%3B in Helicobacter pylori MltD is a endolytic transglycosylase involved mainly in the rearrangement of the peptidoglycan layer of the bacterial cell wall;Dbxref=InterPro:IPR000189,InterPro:IPR002482,InterPro:IPR008258,InterPro:IPR010511,UniProtKB%2FTrEMBL:Q0WHW6,Genbank:YP_002346122.1,GeneID:1173924;gbkey=CDS;gene=mltD;product=membrane-bound lytic murein transglycosylase D;protein_id=YP_002346122.1;transl_table=11
NC_003143.1	RefSeq	region	1226579	1226665	.	-	.	ID=id735;Note=PS00922 Prokaryotic transglycosylases signature.;Dbxref=GeneID:1173924;gbkey=misc_feature;gene=mltD
NC_003143.1	RefSeq	region	1227005	1227037	.	-	.	ID=id736;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site.;Dbxref=GeneID:1173924;gbkey=misc_feature;gene=mltD
NC_003143.1	RefSeq	gene	1227124	1227879	.	-	.	ID=gene1040;Name=gloB;Dbxref=GeneID:1173925;gbkey=Gene;gene=gloB;locus_tag=YPO1079
NC_003143.1	RefSeq	CDS	1227124	1227879	.	-	0	ID=cds995;Name=YP_002346123.1;Parent=gene1040;Dbxref=InterPro:IPR001279,UniProtKB%2FTrEMBL:Q0WHW5,Genbank:YP_002346123.1,GeneID:1173925;gbkey=CDS;gene=gloB;product=hydroxyacylglutathione hydrolase;protein_id=YP_002346123.1;transl_table=11
NC_003143.1	RefSeq	gene	1227924	1228643	.	+	.	ID=gene1041;Name=YPO1080;Dbxref=GeneID:1173926;gbkey=Gene;locus_tag=YPO1080
NC_003143.1	RefSeq	CDS	1227924	1228643	.	+	0	ID=cds996;Name=YP_002346124.1;Parent=gene1041;Dbxref=InterPro:IPR013216,UniProtKB%2FTrEMBL:Q7CH29,Genbank:YP_002346124.1,GeneID:1173926;gbkey=CDS;product=hypothetical protein;protein_id=YP_002346124.1;transl_table=11
NC_003143.1	RefSeq	gene	1228698	1229162	.	-	.	ID=gene1042;Name=rnhA;Dbxref=GeneID:1173927;gbkey=Gene;gene=rnhA;gene_synonym=herA,rnh,rnhA,sdrA;locus_tag=YPO1081
NC_003143.1	RefSeq	CDS	1228698	1229162	.	-	0	ID=cds997;Name=YP_002346125.1;Parent=gene1042;Note=An endonuclease that specifically degrades the RNA strand of RNA-DNA hybrids;Dbxref=InterPro:IPR002156,InterPro:IPR012337,UniProtKB%2FTrEMBL:Q0WHW3,Genbank:YP_002346125.1,GeneID:1173927;gbkey=CDS;gene=rnhA;product=ribonuclease H;protein_id=YP_002346125.1;transl_table=11
NC_003143.1	RefSeq	gene	1229232	1229996	.	+	.	ID=gene1043;Name=dnaQ;Dbxref=GeneID:1173928;gbkey=Gene;gene=dnaQ;gene_synonym=mutD;locus_tag=YPO1082
NC_003143.1	RefSeq	CDS	1229232	1229996	.	+	0	ID=cds998;Name=YP_002346126.1;Parent=gene1043;Note=3%27-5%27 exonuclease of DNA polymerase III;Dbxref=InterPro:IPR006054,InterPro:IPR006055,InterPro:IPR006309,InterPro:IPR012337,InterPro:IPR013520,UniProtKB%2FTrEMBL:Q7CH30,Genbank:YP_002346126.1,GeneID:1173928;gbkey=CDS;gene=dnaQ;product=DNA polymerase III subunit epsilon;protein_id=YP_002346126.1;transl_table=11
NC_003143.1	RefSeq	gene	1230109	1230185	.	+	.	ID=gene1044;Name=YPt_12;Dbxref=GeneID:1173929;gbkey=Gene;locus_tag=YPt_12
NC_003143.1	RefSeq	tRNA	1230109	1230185	.	+	.	ID=rna21;Parent=gene1044;Note=tRNA Asp anticodon GTC%2C Cove score 94.51;Dbxref=GeneID:1173929;gbkey=tRNA;product=tRNA-Asp
NC_003143.1	RefSeq	exon	1230109	1230185	.	+	.	ID=id737;Parent=rna21;Note=tRNA Asp anticodon GTC%2C Cove score 94.51;Dbxref=GeneID:1173929;gbkey=tRNA;product=tRNA-Asp
NC_003143.1	RefSeq	gene	1230242	1231726	.	-	.	ID=gene1045;Name=YPO1083;Dbxref=GeneID:1173930;gbkey=Gene;locus_tag=YPO1083
NC_003143.1	RefSeq	CDS	1230242	1231726	.	-	0	ID=cds999;Name=YP_002346127.1;Parent=gene1045;Dbxref=InterPro:IPR001248,UniProtKB%2FTrEMBL:Q0WHW1,Genbank:YP_002346127.1,GeneID:1173930;gbkey=CDS;product=permease;protein_id=YP_002346127.1;transl_table=11
NC_003143.1	RefSeq	gene	1232065	1232283	.	+	.	ID=gene1046;Name=YPO1084;Dbxref=GeneID:1173931;gbkey=Gene;locus_tag=YPO1084;pseudo=true
NC_003143.1	RefSeq	region	1232065	1232283	.	+	.	ID=id738;Note=Appears to have been interrupted by the insertion of downstream IS100. Similar to N-terminus of Pseudomonas aeruginosa hypothetical protein TR:AAG04906 %28EMBL:AE004580%29 %28308 aa%29 fasta scores: E%28%29: 6.7e-13%2C 56.5%25 id in 69 aa%2C and to N-terminus of Schizosaccharomyces pombe hypothetical 36.2 kDa protein C19G12.03 in chromosome I SPAC19G12.03 TR:O13842 %28EMBL:Z97209%29 %28320 aa%29 fasta scores: E%28%29: 3.6e-06%2C 44.4%25 id in 63 aa;Dbxref=GeneID:1173931;gbkey=misc_feature;pseudo=true
NC_003143.1	RefSeq	repeat_region	1232283	1234236	.	-	.	ID=id739;Note=insertion sequence:IS100;gbkey=repeat_region
NC_003143.1	RefSeq	repeat_region	1232283	1232310	.	+	.	ID=id740;Note=IS100 inverted repeat;gbkey=repeat_region
NC_003143.1	RefSeq	gene	1232349	1233131	.	-	.	ID=gene1047;Name=YPO1085;Note=ypmt1.57c;Dbxref=GeneID:1173932;gbkey=Gene;locus_tag=YPO1085
NC_003143.1	RefSeq	CDS	1232349	1233131	.	-	0	ID=cds1000;Name=YP_002346128.1;Parent=gene1047;Dbxref=InterPro:IPR001270,InterPro:IPR002611,InterPro:IPR003593,UniProtKB%2FTrEMBL:Q7ARK4,Genbank:YP_002346128.1,GeneID:1173932;gbkey=CDS;product=transposase%2FIS protein;protein_id=YP_002346128.1;transl_table=11
NC_003143.1	RefSeq	region	1232781	1232804	.	-	.	ID=id741;Note=PS00017 ATP%2FGTP-binding site motif A %28P-loop%29.;Dbxref=GeneID:1173932;gbkey=misc_feature
NC_003143.1	RefSeq	gene	1233128	1234150	.	-	.	ID=gene1048;Name=y1093;Dbxref=GeneID:1173933;gbkey=Gene;gene=y1093;gene_synonym=ypmt1;locus_tag=YPO1086
NC_003143.1	RefSeq	CDS	1233128	1234150	.	-	0	ID=cds1001;Name=YP_002346129.1;Parent=gene1048;Dbxref=InterPro:IPR001584,InterPro:IPR006120,InterPro:IPR009057,InterPro:IPR012287,InterPro:IPR012337,UniProtKB%2FTrEMBL:Q7ARN5,Genbank:YP_002346129.1,GeneID:1173933;gbkey=CDS;gene=y1093;product=transposase for insertion sequence IS100;protein_id=YP_002346129.1;transl_table=11
NC_003143.1	RefSeq	region	1234034	1234099	.	-	.	ID=id742;Note=Predicted helix-turn-helix motif with score 2147 %28%2B6.50 SD%29 at aa 18-39%2C sequence MSSRAIARELGISRNTVKRYLQ;Dbxref=GeneID:1173933;gbkey=misc_feature;gene=y1093
NC_003143.1	RefSeq	repeat_region	1234209	1234236	.	-	.	ID=id743;Note=IS100 inverted repeat;gbkey=repeat_region
NC_003143.1	RefSeq	gene	1235071	1235391	.	+	.	ID=gene1049;Name=YPO1088;Dbxref=GeneID:1173936;gbkey=Gene;locus_tag=YPO1088
NC_003143.1	RefSeq	CDS	1235071	1235391	.	+	0	ID=cds1002;Name=YP_002346132.1;Parent=gene1049;Dbxref=InterPro:IPR009057,UniProtKB%2FTrEMBL:Q7CH33,Genbank:YP_002346132.1,GeneID:1173936;gbkey=CDS;product=DNA-binding prophage protein;protein_id=YP_002346132.1;transl_table=11
NC_003143.1	RefSeq	region	1235236	1235301	.	+	.	ID=id744;Note=Predicted helix-turn-helix motif with score 1826 %28%2B5.41 SD%29 at aa 56-77%2C sequence GGMASVAKKAGVSRETLYRTLS;Dbxref=GeneID:1173936;gbkey=misc_feature
NC_003143.1	RefSeq	gene	1235740	1236828	.	-	.	ID=gene1050;Name=YPO1089;Dbxref=GeneID:1173937;gbkey=Gene;locus_tag=YPO1089
NC_003143.1	RefSeq	CDS	1235740	1236828	.	-	0	ID=cds1003;Name=YP_002346133.1;Parent=gene1050;Dbxref=UniProtKB%2FTrEMBL:Q74W34,Genbank:YP_002346133.1,GeneID:1173937;gbkey=CDS;product=regulatory prophage protein;protein_id=YP_002346133.1;transl_table=11
NC_003143.1	RefSeq	gene	1236825	1237784	.	-	.	ID=gene1051;Name=YPO1090;Dbxref=GeneID:1173938;gbkey=Gene;locus_tag=YPO1090
NC_003143.1	RefSeq	CDS	1236825	1237784	.	-	0	ID=cds1004;Name=YP_002346134.1;Parent=gene1051;Dbxref=InterPro:IPR006154,InterPro:IPR006171,InterPro:IPR013237,UniProtKB%2FTrEMBL:Q0WHV4,Genbank:YP_002346134.1,GeneID:1173938;gbkey=CDS;product=prophage DNA primase;protein_id=YP_002346134.1;transl_table=11
NC_003143.1	RefSeq	gene	1237777	1238319	.	-	.	ID=gene1052;Name=YPO1091;Dbxref=GeneID:1173939;gbkey=Gene;locus_tag=YPO1091
NC_003143.1	RefSeq	CDS	1237777	1238319	.	-	0	ID=cds1005;Name=YP_002346135.1;Parent=gene1052;Dbxref=UniProtKB%2FTrEMBL:Q7CH34,Genbank:YP_002346135.1,GeneID:1173939;gbkey=CDS;product=prophage protein;protein_id=YP_002346135.1;transl_table=11
NC_003143.1	RefSeq	gene	1238512	1239408	.	-	.	ID=gene1053;Name=YPO1092;Dbxref=GeneID:1173940;gbkey=Gene;locus_tag=YPO1092
NC_003143.1	RefSeq	CDS	1238512	1239408	.	-	0	ID=cds1006;Name=YP_002346136.1;Parent=gene1053;Dbxref=InterPro:IPR010998,InterPro:IPR011010,InterPro:IPR013762,UniProtKB%2FTrEMBL:Q7CH35,Genbank:YP_002346136.1,GeneID:1173940;gbkey=CDS;product=DNA-binding prophage protein;protein_id=YP_002346136.1;transl_table=11
NC_003143.1	RefSeq	region	1239319	1239384	.	-	.	ID=id745;Note=Predicted helix-turn-helix motif with score 1045 %28%2B2.75 SD%29 at aa 9-30%2C sequence REMKMLAKQAGGSHKTVHDRIR;Dbxref=GeneID:1173940;gbkey=misc_feature
NC_003143.1	RefSeq	region	1240566	1243482	.	+	.	ID=id746;Note=Low GC region;gbkey=misc_feature
NC_003143.1	RefSeq	gene	1240596	1242266	.	-	.	ID=gene1054;Name=YPO1096;Dbxref=GeneID:1173944;gbkey=Gene;locus_tag=YPO1096
NC_003143.1	RefSeq	CDS	1240596	1242266	.	-	0	ID=cds1007;Name=YP_002346140.1;Parent=gene1054;Dbxref=UniProtKB%2FTrEMBL:Q74W42,Genbank:YP_002346140.1,GeneID:1173944;gbkey=CDS;product=hypothetical protein;protein_id=YP_002346140.1;transl_table=11
NC_003143.1	RefSeq	gene	1242317	1243405	.	-	.	ID=gene1055;Name=YPO1097;Dbxref=GeneID:1173945;gbkey=Gene;locus_tag=YPO1097
NC_003143.1	RefSeq	CDS	1242317	1243405	.	-	0	ID=cds1008;Name=YP_002346141.1;Parent=gene1055;Dbxref=UniProtKB%2FTrEMBL:Q7CH37,Genbank:YP_002346141.1,GeneID:1173945;gbkey=CDS;product=hypothetical protein;protein_id=YP_002346141.1;transl_table=11
NC_003143.1	RefSeq	gene	1243484	1244683	.	-	.	ID=gene1056;Name=YPO1098;Dbxref=GeneID:1173946;gbkey=Gene;locus_tag=YPO1098
NC_003143.1	RefSeq	CDS	1243484	1244683	.	-	0	ID=cds1009;Name=YP_002346142.1;Parent=gene1056;Dbxref=InterPro:IPR002104,InterPro:IPR011010,InterPro:IPR013762,UniProtKB%2FTrEMBL:Q0WHU6,Genbank:YP_002346142.1,GeneID:1173946;gbkey=CDS;product=prophage integrase;protein_id=YP_002346142.1;transl_table=11
NC_003143.1	RefSeq	repeat_region	1244799	1245510	.	-	.	ID=id747;Note=Contains an %27A%27 at nucleotide position 315.%7EIS200-like insertion sequence:IS1541;gbkey=repeat_region
NC_003143.1	RefSeq	gene	1244907	1245365	.	-	.	ID=gene1057;Name=tnp;Dbxref=GeneID:1173947;gbkey=Gene;gene=tnp;locus_tag=YPO1099
NC_003143.1	RefSeq	CDS	1244907	1245365	.	-	0	ID=cds1010;Name=YP_002346143.1;Parent=gene1057;Dbxref=InterPro:IPR002686,UniProtKB%2FTrEMBL:Q56938,Genbank:YP_002346143.1,GeneID:1173947;gbkey=CDS;gene=tnp;product=transposase for the IS1541 insertion element;protein_id=YP_002346143.1;transl_table=11
NC_003143.1	RefSeq	gene	1245588	1245951	.	+	.	ID=gene1058;Name=ssrA;Dbxref=GeneID:1173948;gbkey=Gene;gene=ssrA;locus_tag=YPOs04
NC_003143.1	RefSeq	tmRNA	1245588	1245951	.	+	.	ID=rna22;Parent=gene1058;Note=Similar to Escherichia coli small stable RNA molecule%2C tmRNA %5B10Sa RNA%5D %28D12501%29%2C 91%25 identity in 333 nt overlap;Dbxref=GeneID:1173948;gbkey=tmRNA;gene=ssrA
NC_003143.1	RefSeq	exon	1245588	1245951	.	+	.	ID=id748;Parent=rna22;Note=Similar to Escherichia coli small stable RNA molecule%2C tmRNA %5B10Sa RNA%5D %28D12501%29%2C 91%25 identity in 333 nt overlap;Dbxref=GeneID:1173948;gbkey=tmRNA;gene=ssrA
NC_003143.1	RefSeq	gene	1246000	1246482	.	-	.	ID=gene1059;Name=smpB;Dbxref=GeneID:1173949;gbkey=Gene;gene=smpB;gene_synonym=smqB;locus_tag=YPO1101
NC_003143.1	RefSeq	CDS	1246000	1246482	.	-	0	ID=cds1011;Name=YP_002346144.1;Parent=gene1059;Note=binds to ssrA RNA %28tmRNA%29 and is required for its successful binding to ribosomes%3B also appears to function in the trans-translation step by promoting accommodation of tmRNA into the ribosomal A site%3B SmpB protects the tmRNA from RNase R degradation in Caulobacter crescentus%3B both the tmRNA and SmpB are regulated in cell cycle-dependent manner%3B functions in release of stalled ribosomes from damaged mRNAs and targeting proteins for degradation;Dbxref=InterPro:IPR000037,UniProtKB%2FTrEMBL:Q0WHU4,Genbank:YP_002346144.1,GeneID:1173949;gbkey=CDS;gene=smpB;product=SsrA-binding protein;protein_id=YP_002346144.1;transl_table=11
NC_003143.1	RefSeq	region	1246351	1246389	.	-	.	ID=id749;Note=PS01317 Protein smpB signature.;Dbxref=GeneID:1173949;gbkey=misc_feature;gene=smpB
NC_003143.1	RefSeq	gene	1246643	1247077	.	+	.	ID=gene1060;Name=YPO1102;Dbxref=GeneID:1173950;gbkey=Gene;locus_tag=YPO1102
NC_003143.1	RefSeq	CDS	1246643	1247077	.	+	0	ID=cds1012;Name=YP_002346145.1;Parent=gene1060;Dbxref=InterPro:IPR005031,UniProtKB%2FTrEMBL:Q0WHU3,Genbank:YP_002346145.1,GeneID:1173950;gbkey=CDS;product=hypothetical protein;protein_id=YP_002346145.1;transl_table=11
NC_003143.1	RefSeq	gene	1247070	1247354	.	+	.	ID=gene1061;Name=YPO1103;Dbxref=GeneID:1173951;gbkey=Gene;locus_tag=YPO1103
NC_003143.1	RefSeq	CDS	1247070	1247354	.	+	0	ID=cds1013;Name=YP_002346146.1;Parent=gene1061;Dbxref=InterPro:IPR005346,UniProtKB%2FTrEMBL:Q0WHU2,Genbank:YP_002346146.1,GeneID:1173951;gbkey=CDS;product=hypothetical protein;protein_id=YP_002346146.1;transl_table=11
NC_003143.1	RefSeq	gene	1247504	1247854	.	-	.	ID=gene1062;Name=YPO1104;Dbxref=GeneID:1173952;gbkey=Gene;locus_tag=YPO1104
NC_003143.1	RefSeq	CDS	1247504	1247854	.	-	0	ID=cds1014;Name=YP_002346147.1;Parent=gene1062;Dbxref=InterPro:IPR007450,UniProtKB%2FTrEMBL:Q7CH39,Genbank:YP_002346147.1,GeneID:1173952;gbkey=CDS;product=hypothetical protein;protein_id=YP_002346147.1;transl_table=11
NC_003143.1	RefSeq	region	1247786	1247818	.	-	.	ID=id750;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site.;Dbxref=GeneID:1173952;gbkey=misc_feature
NC_003143.1	RefSeq	gene	1247959	1249638	.	-	.	ID=gene1063;Name=YPO1105;Dbxref=GeneID:1173953;gbkey=Gene;locus_tag=YPO1105
NC_003143.1	RefSeq	CDS	1247959	1249638	.	-	0	ID=cds1015;Name=YP_002346148.1;Parent=gene1063;Dbxref=InterPro:IPR003395,InterPro:IPR004604,UniProtKB%2FTrEMBL:Q0WHU0,Genbank:YP_002346148.1,GeneID:1173953;gbkey=CDS;product=recombination and repair protein;protein_id=YP_002346148.1;transl_table=11
NC_003143.1	RefSeq	region	1249513	1249536	.	-	.	ID=id751;Note=PS00017 ATP%2FGTP-binding site motif A %28P-loop%29.;Dbxref=GeneID:1173953;gbkey=misc_feature
NC_003143.1	RefSeq	gene	1249707	1250588	.	-	.	ID=gene1064;Name=ppnK;Dbxref=GeneID:1173954;gbkey=Gene;gene=ppnK;locus_tag=YPO1106
NC_003143.1	RefSeq	CDS	1249707	1250588	.	-	0	ID=cds1016;Name=YP_002346149.1;Parent=gene1064;Note=catalyzes the phosphorylation of NAD to NADP;Dbxref=InterPro:IPR002504,UniProtKB%2FTrEMBL:Q0WHT9,Genbank:YP_002346149.1,GeneID:1173954;gbkey=CDS;gene=ppnK;product=inorganic polyphosphate%2FATP-NAD kinase;protein_id=YP_002346149.1;transl_table=11
NC_003143.1	RefSeq	gene	1250712	1251290	.	+	.	ID=gene1065;Name=YPO1107;Dbxref=GeneID:1173955;gbkey=Gene;locus_tag=YPO1107
NC_003143.1	RefSeq	CDS	1250712	1251290	.	+	0	ID=cds1017;Name=YP_002346150.1;Parent=gene1065;Note=with DnaK and DnaJ acts in response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins%3B may act as a thermosensor;Dbxref=InterPro:IPR000740,InterPro:IPR009012,InterPro:IPR013805,UniProtKB%2FTrEMBL:Q0WHT8,Genbank:YP_002346150.1,GeneID:1173955;gbkey=CDS;product=heat shock protein GrpE;protein_id=YP_002346150.1;transl_table=11
NC_003143.1	RefSeq	region	1251141	1251272	.	+	.	ID=id752;Note=PS01071 grpE protein signature.;Dbxref=GeneID:1173955;gbkey=misc_feature
NC_003143.1	RefSeq	gene	1251398	1252678	.	-	.	ID=gene1066;Name=gltA;Dbxref=GeneID:1173956;gbkey=Gene;gene=gltA;gene_synonym=gluT,icdB;locus_tag=YPO1108
NC_003143.1	RefSeq	CDS	1251398	1252678	.	-	0	ID=cds1018;Name=YP_002346151.1;Parent=gene1066;Note=type II enzyme%3B in Escherichia coli this enzyme forms a trimer of dimers which is allosterically inhibited by NADH and competitively inhibited by alpha-ketoglutarate%3B allosteric inhibition is lost when Cys206 is chemically modified which also affects hexamer formation%3B forms oxaloacetate and acetyl-CoA and water from citrate and coenzyme A%3B functions in TCA cycle%2C glyoxylate cycle and respiration%3B enzyme from Helicobacter pylori is not inhibited by NADH;Dbxref=InterPro:IPR002020,InterPro:IPR010953,UniProtKB%2FTrEMBL:Q7CH41,Genbank:YP_002346151.1,GeneID:1173956;gbkey=CDS;gene=gltA;product=type II citrate synthase;protein_id=YP_002346151.1;transl_table=11
NC_003143.1	RefSeq	region	1251737	1251775	.	-	.	ID=id753;Note=PS00480 Citrate synthase signature.;Dbxref=GeneID:1173956;gbkey=misc_feature;gene=gltA
NC_003143.1	RefSeq	gene	1253388	1253777	.	+	.	ID=gene1067;Name=sdhC;Dbxref=GeneID:1173957;gbkey=Gene;gene=sdhC;locus_tag=YPO1109
NC_003143.1	RefSeq	CDS	1253388	1253777	.	+	0	ID=cds1019;Name=YP_002346152.1;Parent=gene1067;Dbxref=InterPro:IPR000701,UniProtKB%2FTrEMBL:Q7CH42,Genbank:YP_002346152.1,GeneID:1173957;gbkey=CDS;gene=sdhC;product=succinate dehydrogenase cytochrome b556 large membrane subunit;protein_id=YP_002346152.1;transl_table=11
NC_003143.1	RefSeq	region	1253412	1253486	.	+	.	ID=id754;Note=PS01000 Succinate dehydrogenase cytochrome b subunit signature 1.;Dbxref=GeneID:1173957;gbkey=misc_feature;gene=sdhC
NC_003143.1	RefSeq	region	1253637	1253678	.	+	.	ID=id755;Note=PS01001 Succinate dehydrogenase cytochrome b subunit signature 2.;Dbxref=GeneID:1173957;gbkey=misc_feature;gene=sdhC
NC_003143.1	RefSeq	gene	1253771	1254118	.	+	.	ID=gene1068;Name=sdhD;Dbxref=GeneID:1173958;gbkey=Gene;gene=sdhD;locus_tag=YPO1110
NC_003143.1	RefSeq	CDS	1253771	1254118	.	+	0	ID=cds1020;Name=YP_002346153.1;Parent=gene1068;Dbxref=UniProtKB%2FTrEMBL:Q7CH43,Genbank:YP_002346153.1,GeneID:1173958;gbkey=CDS;gene=sdhD;product=succinate dehydrogenase cytochrome b556 small membrane subunit;protein_id=YP_002346153.1;transl_table=11
NC_003143.1	RefSeq	gene	1254119	1255885	.	+	.	ID=gene1069;Name=sdhA;Dbxref=GeneID:1173959;gbkey=Gene;gene=sdhA;locus_tag=YPO1111
NC_003143.1	RefSeq	CDS	1254119	1255885	.	+	0	ID=cds1021;Name=YP_002346154.1;Parent=gene1069;Note=part of four member succinate dehydrogenase enzyme complex that forms a trimeric complex %28trimer of tetramers%29%3B SdhA%2FB are the catalytic subcomplex and can exhibit succinate dehydrogenase activity in the absence of SdhC%2FD which are the membrane components and form cytochrome b556%3B SdhC binds ubiquinone%3B oxidizes succinate to fumarate while reducing ubiquinone to ubiquinol;Dbxref=InterPro:IPR003952,InterPro:IPR003953,InterPro:IPR004112,InterPro:IPR011281,InterPro:IPR013027,InterPro:IPR014006,UniProtKB%2FTrEMBL:Q7CH44,Genbank:YP_002346154.1,GeneID:1173959;gbkey=CDS;gene=sdhA;product=succinate dehydrogenase flavoprotein subunit;protein_id=YP_002346154.1;transl_table=11
NC_003143.1	RefSeq	region	1254245	1254274	.	+	.	ID=id756;Note=PS00504 Fumarate reductase %2F succinate dehydrogenase FAD-binding site.;Dbxref=GeneID:1173959;gbkey=misc_feature;gene=sdhA
NC_003143.1	RefSeq	gene	1255935	1256651	.	+	.	ID=gene1070;Name=sdhB;Dbxref=GeneID:1173960;gbkey=Gene;gene=sdhB;locus_tag=YPO1112
NC_003143.1	RefSeq	CDS	1255935	1256651	.	+	0	ID=cds1022;Name=YP_002346155.1;Parent=gene1070;Note=part of four member succinate dehydrogenase enzyme complex that forms a trimeric complex %28trimer of tetramers%29%3B SdhA%2FB are the catalytic subcomplex and can exhibit succinate dehydrogenase activity in the absence of SdhC%2FD which are the membrane components and form cytochrome b556%3B SdhC binds ubiquinone%3B oxidizes succinate to fumarate while reducing ubiquinone to ubiquinol%3B the catalytic subunits are similar to fumarate reductase;Dbxref=InterPro:IPR001041,InterPro:IPR001450,InterPro:IPR004489,InterPro:IPR009051,InterPro:IPR012285,InterPro:IPR012675,UniProtKB%2FTrEMBL:Q7CH45,Genbank:YP_002346155.1,GeneID:1173960;gbkey=CDS;gene=sdhB;product=succinate dehydrogenase iron-sulfur subunit;protein_id=YP_002346155.1;transl_table=11
NC_003143.1	RefSeq	region	1256379	1256414	.	+	.	ID=id757;Note=PS00198 4Fe-4S ferredoxins%2C iron-sulfur binding region signature.;Dbxref=GeneID:1173960;gbkey=misc_feature;gene=sdhB
NC_003143.1	RefSeq	gene	1257007	1259814	.	+	.	ID=gene1071;Name=sucA;Dbxref=GeneID:1173961;gbkey=Gene;gene=sucA;locus_tag=YPO1113
NC_003143.1	RefSeq	CDS	1257007	1259814	.	+	0	ID=cds1023;Name=YP_002346156.1;Parent=gene1071;Note=SucA%3B E1 component of the oxoglutarate dehydrogenase complex which catalyzes the formation of succinyl-CoA from 2-oxoglutarate%3B SucA catalyzes the reaction of 2-oxoglutarate with dihydrolipoamide succinyltransferase-lipoate to form dihydrolipoamide succinyltransferase-succinyldihydrolipoate and carbon dioxide;Dbxref=InterPro:IPR001017,InterPro:IPR005475,InterPro:IPR011603,UniProtKB%2FTrEMBL:Q7CH46,Genbank:YP_002346156.1,GeneID:1173961;gbkey=CDS;gene=sucA;product=2-oxoglutarate dehydrogenase E1;protein_id=YP_002346156.1;transl_table=11
NC_003143.1	RefSeq	gene	1259844	1261067	.	+	.	ID=gene1072;Name=sucB;Dbxref=GeneID:1173962;gbkey=Gene;gene=sucB;locus_tag=YPO1114
NC_003143.1	RefSeq	CDS	1259844	1261067	.	+	0	ID=cds1024;Name=YP_002346157.1;Parent=gene1072;Note=component of 2-oxoglutarate dehydrogenase complex%3B catalyzes the transfer of succinyl coenzyme A to form succinyl CoA as part of the conversion of 2-oxoglutarate to succinyl-CoA;Dbxref=InterPro:IPR000089,InterPro:IPR001078,InterPro:IPR003016,InterPro:IPR004167,InterPro:IPR006255,InterPro:IPR011053,UniProtKB%2FTrEMBL:Q7CH47,Genbank:YP_002346157.1,GeneID:1173962;gbkey=CDS;gene=sucB;product=dihydrolipoamide succinyltransferase;protein_id=YP_002346157.1;transl_table=11
NC_003143.1	RefSeq	gene	1261180	1262346	.	+	.	ID=gene1073;Name=sucC;Dbxref=GeneID:1173963;gbkey=Gene;gene=sucC;locus_tag=YPO1115
NC_003143.1	RefSeq	CDS	1261180	1262346	.	+	0	ID=cds1025;Name=YP_002346158.1;Parent=gene1073;Note=catalyzes the interconversion of succinyl-CoA and succinate;Dbxref=InterPro:IPR005809,InterPro:IPR005811,InterPro:IPR011761,InterPro:IPR013650,InterPro:IPR013816,UniProtKB%2FTrEMBL:Q0WHT0,Genbank:YP_002346158.1,GeneID:1173963;gbkey=CDS;gene=sucC;product=succinyl-CoA synthetase subunit beta;protein_id=YP_002346158.1;transl_table=11
NC_003143.1	RefSeq	region	1261948	1262022	.	+	.	ID=id758;Note=PS01217 ATP-citrate lyase %2F succinyl-CoA ligases family signature 3.;Dbxref=GeneID:1173963;gbkey=misc_feature;gene=sucC
NC_003143.1	RefSeq	gene	1262346	1263218	.	+	.	ID=gene1074;Name=sucD;Dbxref=GeneID:1173964;gbkey=Gene;gene=sucD;locus_tag=YPO1116
NC_003143.1	RefSeq	CDS	1262346	1263218	.	+	0	ID=cds1026;Name=YP_002346159.1;Parent=gene1074;Note=Catalyzes the only substrate-level phosphorylation in the TCA cycle;Dbxref=InterPro:IPR003781,InterPro:IPR005810,InterPro:IPR005811,UniProtKB%2FTrEMBL:Q7CH48,Genbank:YP_002346159.1,GeneID:1173964;gbkey=CDS;gene=sucD;product=succinyl-CoA synthetase subunit alpha;protein_id=YP_002346159.1;transl_table=11
NC_003143.1	RefSeq	region	1262799	1262888	.	+	.	ID=id759;Note=PS01216 ATP-citrate lyase %2F succinyl-CoA ligases family signature 1.;Dbxref=GeneID:1173964;gbkey=misc_feature;gene=sucD
NC_003143.1	RefSeq	region	1263051	1263092	.	+	.	ID=id760;Note=PS00399 ATP-citrate lyase %2F succinyl-CoA ligases family active site.;Dbxref=GeneID:1173964;gbkey=misc_feature;gene=sucD
NC_003143.1	RefSeq	gene	1263985	1265553	.	+	.	ID=gene1075;Name=cydA;Dbxref=GeneID:1173965;gbkey=Gene;gene=cydA;locus_tag=YPO1117
NC_003143.1	RefSeq	CDS	1263985	1265553	.	+	0	ID=cds1027;Name=YP_002346160.1;Parent=gene1075;Dbxref=InterPro:IPR002585,UniProtKB%2FTrEMBL:Q7CH49,Genbank:YP_002346160.1,GeneID:1173965;gbkey=CDS;gene=cydA;product=cytochrome D ubiquinol oxidase subunit I;protein_id=YP_002346160.1;transl_table=11
NC_003143.1	RefSeq	gene	1265568	1266707	.	+	.	ID=gene1076;Name=cydB;Dbxref=GeneID:1173966;gbkey=Gene;gene=cydB;locus_tag=YPO1118
NC_003143.1	RefSeq	CDS	1265568	1266707	.	+	0	ID=cds1028;Name=YP_002346161.1;Parent=gene1076;Dbxref=InterPro:IPR003317,UniProtKB%2FTrEMBL:Q7CH50,Genbank:YP_002346161.1,GeneID:1173966;gbkey=CDS;gene=cydB;product=cytochrome D ubiquinol oxidase subunit II;protein_id=YP_002346161.1;transl_table=11
NC_003143.1	RefSeq	gene	1266799	1267131	.	+	.	ID=gene1077;Name=YPO1119;Dbxref=GeneID:1173967;gbkey=Gene;locus_tag=YPO1119
NC_003143.1	RefSeq	CDS	1266799	1267131	.	+	0	ID=cds1029;Name=YP_002346162.1;Parent=gene1077;Dbxref=InterPro:IPR011846,UniProtKB%2FTrEMBL:Q7CH51,Genbank:YP_002346162.1,GeneID:1173967;gbkey=CDS;product=hypothetical protein;protein_id=YP_002346162.1;transl_table=11
NC_003143.1	RefSeq	gene	1267263	1267664	.	+	.	ID=gene1078;Name=YPO1120;Dbxref=GeneID:1173968;gbkey=Gene;locus_tag=YPO1120
NC_003143.1	RefSeq	CDS	1267263	1267664	.	+	0	ID=cds1030;Name=YP_002346163.1;Parent=gene1078;Note=catalyzes the hydrolysis of short chain aliphatic acyl-CoA thioesters%3B physiological role remains unknown%3B involved in phospholipid metabolism%3B part of the Tol%2FPal system of proteins that are critical for maintaining the integrity of the cell envelope components;Dbxref=InterPro:IPR006683,InterPro:IPR006684,UniProtKB%2FTrEMBL:Q7CH52,Genbank:YP_002346163.1,GeneID:1173968;gbkey=CDS;product=acyl-CoA thioester hydrolase;protein_id=YP_002346163.1;transl_table=11
NC_003143.1	RefSeq	gene	1267664	1268350	.	+	.	ID=gene1079;Name=tolQ;Dbxref=GeneID:1173969;gbkey=Gene;gene=tolQ;locus_tag=YPO1121
NC_003143.1	RefSeq	CDS	1267664	1268350	.	+	0	ID=cds1031;Name=YP_002346164.1;Parent=gene1079;Note=membrane spanning protein in TolA-TolQ-TolR complex%3B involved in the tonB-independent uptake of group A colicins;Dbxref=InterPro:IPR002898,UniProtKB%2FTrEMBL:Q7CH53,Genbank:YP_002346164.1,GeneID:1173969;gbkey=CDS;gene=tolQ;product=colicin uptake protein TolQ;protein_id=YP_002346164.1;transl_table=11
NC_003143.1	RefSeq	gene	1268363	1268791	.	+	.	ID=gene1080;Name=tolR;Dbxref=GeneID:1173970;gbkey=Gene;gene=tolR;locus_tag=YPO1122
NC_003143.1	RefSeq	CDS	1268363	1268791	.	+	0	ID=cds1032;Name=YP_002346165.1;Parent=gene1080;Note=membrane spanning protein in TolA-TolQ-TolR complex%3B involved in the tonB-independent uptake of group A colicins;Dbxref=InterPro:IPR003400,UniProtKB%2FTrEMBL:Q7CH54,Genbank:YP_002346165.1,GeneID:1173970;gbkey=CDS;gene=tolR;product=colicin uptake protein TolR;protein_id=YP_002346165.1;transl_table=11
NC_003143.1	RefSeq	region	1268411	1268479	.	+	.	ID=id761;Note=1 probable transmembrane helix predicted;Dbxref=GeneID:1173970;gbkey=misc_feature;gene=tolR
NC_003143.1	RefSeq	gene	1268903	1270069	.	+	.	ID=gene1081;Name=tolA;Dbxref=GeneID:1173971;gbkey=Gene;gene=tolA;locus_tag=YPO1123
NC_003143.1	RefSeq	CDS	1268903	1270069	.	+	0	ID=cds1033;Name=YP_002346166.1;Parent=gene1081;Note=inner membrane component of 7 member Tol-Pal envelope-spanning complex%3B involved in maintaining cell envelope integrity%3B utilized by colicins and filamentous phages for import%3B interacts with TolB%2C Pal%2C and through TolB to various outer membrane porins;Dbxref=InterPro:IPR010528,UniProtKB%2FTrEMBL:Q0WHS2,Genbank:YP_002346166.1,GeneID:1173971;gbkey=CDS;gene=tolA;product=cell envelope integrity inner membrane protein TolA;protein_id=YP_002346166.1;transl_table=11
NC_003143.1	RefSeq	region	1268939	1269007	.	+	.	ID=id762;Note=1 probable transmembrane helix predicted;Dbxref=GeneID:1173971;gbkey=misc_feature;gene=tolA
NC_003143.1	RefSeq	gene	1270189	1271481	.	+	.	ID=gene1082;Name=tolB;Dbxref=GeneID:1173972;gbkey=Gene;gene=tolB;locus_tag=YPO1124
NC_003143.1	RefSeq	CDS	1270189	1271481	.	+	0	ID=cds1034;Name=YP_002346167.1;Parent=gene1082;Note=forms dimers%3B may be involved in cell envelope integrity%3B interacts with outer membrane proteins and with the C-terminal domain of inner membrane protein TolA;Dbxref=InterPro:IPR007195,InterPro:IPR011042,InterPro:IPR011044,InterPro:IPR011659,UniProtKB%2FTrEMBL:Q0WHS1,Genbank:YP_002346167.1,GeneID:1173972;gbkey=CDS;gene=tolB;product=translocation protein TolB;protein_id=YP_002346167.1;transl_table=11
NC_003143.1	RefSeq	gene	1271532	1272038	.	+	.	ID=gene1083;Name=pal;Dbxref=GeneID:1173973;gbkey=Gene;gene=pal;locus_tag=YPO1125
NC_003143.1	RefSeq	CDS	1271532	1272038	.	+	0	ID=cds1035;Name=YP_002346168.1;Parent=gene1083;Dbxref=InterPro:IPR006664,InterPro:IPR006665,InterPro:IPR006690,UniProtKB%2FTrEMBL:Q7CH55,Genbank:YP_002346168.1,GeneID:1173973;gbkey=CDS;gene=pal;product=peptidoglycan-associated outer membrane lipoprotein;protein_id=YP_002346168.1;transl_table=11
NC_003143.1	RefSeq	region	1271565	1271597	.	+	.	ID=id763;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site.;Dbxref=GeneID:1173973;gbkey=misc_feature;gene=pal
NC_003143.1	RefSeq	region	1271829	1271963	.	+	.	ID=id764;Note=PS01068 OmpA-like domain.;Dbxref=GeneID:1173973;gbkey=misc_feature;gene=pal
NC_003143.1	RefSeq	gene	1272048	1272857	.	+	.	ID=gene1084;Name=YPO1126;Dbxref=GeneID:1173974;gbkey=Gene;locus_tag=YPO1126
NC_003143.1	RefSeq	CDS	1272048	1272857	.	+	0	ID=cds1036;Name=YP_002346169.1;Parent=gene1084;Note=periplasmic protein that interacts with TolA%3B the tol-pal system is probably involved in maintaining cell envelope integrity;Dbxref=InterPro:IPR011072,InterPro:IPR011990,InterPro:IPR013026,InterPro:IPR013105,UniProtKB%2FTrEMBL:Q0WHR9,Genbank:YP_002346169.1,GeneID:1173974;gbkey=CDS;product=tol-pal system protein YbgF;protein_id=YP_002346169.1;transl_table=11
NC_003143.1	RefSeq	gene	1273048	1273123	.	+	.	ID=gene1085;Name=YPt_13;Dbxref=GeneID:1173975;gbkey=Gene;locus_tag=YPt_13
NC_003143.1	RefSeq	tRNA	1273048	1273123	.	+	.	ID=rna23;Parent=gene1085;Note=tRNA Lys anticodon TTT%2C Cove score 95.27;Dbxref=GeneID:1173975;gbkey=tRNA;product=tRNA-Lys
NC_003143.1	RefSeq	exon	1273048	1273123	.	+	.	ID=id765;Parent=rna23;Note=tRNA Lys anticodon TTT%2C Cove score 95.27;Dbxref=GeneID:1173975;gbkey=tRNA;product=tRNA-Lys
NC_003143.1	RefSeq	gene	1273151	1273226	.	+	.	ID=gene1086;Name=YPt_14;Dbxref=GeneID:1173976;gbkey=Gene;locus_tag=YPt_14
NC_003143.1	RefSeq	tRNA	1273151	1273226	.	+	.	ID=rna24;Parent=gene1086;Note=tRNA Lys anticodon TTT%2C Cove score 95.27;Dbxref=GeneID:1173976;gbkey=tRNA;product=tRNA-Lys
NC_003143.1	RefSeq	exon	1273151	1273226	.	+	.	ID=id766;Parent=rna24;Note=tRNA Lys anticodon TTT%2C Cove score 95.27;Dbxref=GeneID:1173976;gbkey=tRNA;product=tRNA-Lys
NC_003143.1	RefSeq	gene	1273255	1273324	.	+	.	ID=gene1087;Name=YPt_15;Dbxref=GeneID:1173977;gbkey=Gene;locus_tag=YPt_15;pseudo=true
NC_003143.1	RefSeq	tRNA	1273255	1273324	.	+	.	ID=rna25;Parent=gene1087;Note=tRNA Pseudo anticodon TTT%2C Cove score 40.49%7EtRNA Pseudo anticodon TTT%2C Cove score 40.49;Dbxref=GeneID:1173977;gbkey=tRNA;product=tRNA-OTHER;pseudo=true
NC_003143.1	RefSeq	exon	1273255	1273324	.	+	.	ID=id767;Parent=rna25;Note=tRNA Pseudo anticodon TTT%2C Cove score 40.49%7EtRNA Pseudo anticodon TTT%2C Cove score 40.49;Dbxref=GeneID:1173977;gbkey=tRNA;product=tRNA-OTHER;pseudo=true
NC_003143.1	RefSeq	gene	1273693	1274754	.	+	.	ID=gene1088;Name=nadA;Dbxref=GeneID:1173978;gbkey=Gene;gene=nadA;gene_synonym=nicA;locus_tag=YPO1127
NC_003143.1	RefSeq	CDS	1273693	1274754	.	+	0	ID=cds1037;Name=YP_002346170.1;Parent=gene1088;Note=3 different subfamilies%3B catalyzes the formation of quinolinate from iminoaspartate and dihydroxyacetone phosphate;Dbxref=InterPro:IPR003473,Genbank:YP_002346170.1,GeneID:1173978;gbkey=CDS;gene=nadA;product=quinolinate synthetase;protein_id=YP_002346170.1;transl_table=11
NC_003143.1	RefSeq	gene	1274876	1275601	.	+	.	ID=gene1089;Name=pnuC;Dbxref=GeneID:1173979;gbkey=Gene;gene=pnuC;locus_tag=YPO1128
NC_003143.1	RefSeq	CDS	1274876	1275601	.	+	0	ID=cds1038;Name=YP_002346171.1;Parent=gene1089;Dbxref=InterPro:IPR006419,UniProtKB%2FTrEMBL:Q7CH56,Genbank:YP_002346171.1,GeneID:1173979;gbkey=CDS;gene=pnuC;product=intergral membrane NMN transport protein PnuC;protein_id=YP_002346171.1;transl_table=11
NC_003143.1	RefSeq	gene	1275716	1276654	.	-	.	ID=gene1090;Name=YPO1129;Dbxref=GeneID:1173980;gbkey=Gene;locus_tag=YPO1129
NC_003143.1	RefSeq	CDS	1275716	1276654	.	-	0	ID=cds1039;Name=YP_002346172.1;Parent=gene1090;Note=involved in zinc efflux across the cytoplasmic membrane;Dbxref=InterPro:IPR000187,InterPro:IPR002524,UniProtKB%2FTrEMBL:Q0WHR6,Genbank:YP_002346172.1,GeneID:1173980;gbkey=CDS;product=zinc transporter ZitB;protein_id=YP_002346172.1;transl_table=11
NC_003143.1	RefSeq	region	1277103	1278062	.	+	.	ID=id768;Note=Similar to Escherichia coli phospho-2-dehydro-3-deoxyheptonate aldolase%2C Phe-sensitive AroG SW:AROG_ECOLI %28P00886%29 %28350 aa%29 fasta scores: E%28%29: 0%2C86.6%25 id in 320 aa. The IS insertion occurred near the C-terminal end %28following codon 320%29. This CDS is disrupted by the insertion of IS100. The insertion occurred near the C-terminus. It is not clear whether this insertion affects the function of the protein.;Dbxref=PSEUDO:CAL19796.1;gbkey=misc_feature;part=1%2F2;pseudo=true
NC_003143.1	RefSeq	region	1280022	1280114	.	+	.	ID=id768;Note=Similar to Escherichia coli phospho-2-dehydro-3-deoxyheptonate aldolase%2C Phe-sensitive AroG SW:AROG_ECOLI %28P00886%29 %28350 aa%29 fasta scores: E%28%29: 0%2C86.6%25 id in 320 aa. The IS insertion occurred near the C-terminal end %28following codon 320%29. This CDS is disrupted by the insertion of IS100. The insertion occurred near the C-terminus. It is not clear whether this insertion affects the function of the protein.;Dbxref=PSEUDO:CAL19796.1;gbkey=misc_feature;part=2%2F2;pseudo=true
NC_003143.1	RefSeq	gene	1277103	1278119	.	+	.	ID=gene1091;Name=YPO1129a;Dbxref=GeneID:16744744;gbkey=Gene;locus_tag=YPO1129a
NC_003143.1	RefSeq	CDS	1277103	1278119	.	+	0	ID=cds1040;Name=YP_008479689.1;Parent=gene1091;Dbxref=Genbank:YP_008479689.1,GeneID:16744744;gbkey=CDS;product=phospho-2-dehydro-3-deoxyheptonate aldolase;protein_id=YP_008479689.1;transl_table=11
NC_003143.1	RefSeq	repeat_region	1278063	1280016	.	-	.	ID=id769;Note=insertion sequence:IS100;gbkey=repeat_region
NC_003143.1	RefSeq	repeat_region	1278063	1278090	.	+	.	ID=id770;Note=IS100 inverted repeat;Dbxref=GeneID:16744744;gbkey=repeat_region
NC_003143.1	RefSeq	gene	1278129	1278911	.	-	.	ID=gene1092;Name=YPO1131;Note=ypmt1.57c;Dbxref=GeneID:1173982;gbkey=Gene;locus_tag=YPO1131
NC_003143.1	RefSeq	CDS	1278129	1278911	.	-	0	ID=cds1041;Name=YP_002346173.1;Parent=gene1092;Dbxref=InterPro:IPR001270,InterPro:IPR002611,InterPro:IPR003593,UniProtKB%2FTrEMBL:Q7ARK4,Genbank:YP_002346173.1,GeneID:1173982;gbkey=CDS;product=transposase%2FIS protein;protein_id=YP_002346173.1;transl_table=11
NC_003143.1	RefSeq	region	1278561	1278584	.	-	.	ID=id771;Note=PS00017 ATP%2FGTP-binding site motif A %28P-loop%29.;Dbxref=GeneID:1173982;gbkey=misc_feature
NC_003143.1	RefSeq	gene	1278908	1279930	.	-	.	ID=gene1093;Name=y1093;Dbxref=GeneID:1173983;gbkey=Gene;gene=y1093;gene_synonym=ypmt1;locus_tag=YPO1132
NC_003143.1	RefSeq	CDS	1278908	1279930	.	-	0	ID=cds1042;Name=YP_002346174.1;Parent=gene1093;Dbxref=InterPro:IPR001584,InterPro:IPR006120,InterPro:IPR009057,InterPro:IPR012287,InterPro:IPR012337,UniProtKB%2FTrEMBL:Q7ARN5,Genbank:YP_002346174.1,GeneID:1173983;gbkey=CDS;gene=y1093;product=transposase for insertion sequence IS100;protein_id=YP_002346174.1;transl_table=11
NC_003143.1	RefSeq	region	1279814	1279879	.	-	.	ID=id772;Note=Predicted helix-turn-helix motif with score 2147 %28%2B6.50 SD%29 at aa 18-39%2C sequence MSSRAIARELGISRNTVKRYLQ;Dbxref=GeneID:1173983;gbkey=misc_feature;gene=y1093
NC_003143.1	RefSeq	repeat_region	1279989	1280016	.	-	.	ID=id773;Note=IS100 inverted repeat;gbkey=repeat_region
NC_003143.1	RefSeq	gene	1280296	1281048	.	-	.	ID=gene1094;Name=gpmA;Dbxref=GeneID:1173984;gbkey=Gene;gene=gpmA;locus_tag=YPO1133
NC_003143.1	RefSeq	CDS	1280296	1281048	.	-	0	ID=cds1043;Name=YP_002346175.1;Parent=gene1094;Note=2%2C3-bisphosphoglycerate-dependent%3B catalyzes the interconversion of 2-phosphoglycerate to 3-phosphoglycerate;Dbxref=InterPro:IPR001345,InterPro:IPR005952,InterPro:IPR013078,UniProtKB%2FTrEMBL:Q0WHR3,Genbank:YP_002346175.1,GeneID:1173984;gbkey=CDS;gene=gpmA;product=phosphoglyceromutase;protein_id=YP_002346175.1;transl_table=11
NC_003143.1	RefSeq	region	1280998	1281027	.	-	.	ID=id774;Note=PS00175 Phosphoglycerate mutase family phosphohistidine signature.;Dbxref=GeneID:1173984;gbkey=misc_feature;gene=gpmA
NC_003143.1	RefSeq	gene	1281395	1281730	.	-	.	ID=gene1095;Name=psiF;Dbxref=GeneID:1173985;gbkey=Gene;gene=psiF;locus_tag=YPO1134
NC_003143.1	RefSeq	CDS	1281395	1281730	.	-	0	ID=cds1044;Name=YP_002346176.1;Parent=gene1095;Dbxref=InterPro:IPR011690,UniProtKB%2FTrEMBL:Q7CH57,Genbank:YP_002346176.1,GeneID:1173985;gbkey=CDS;gene=psiF;product=starvation-inducible protein;protein_id=YP_002346176.1;transl_table=11
NC_003143.1	RefSeq	gene	1282023	1283092	.	-	.	ID=gene1096;Name=galM;Dbxref=GeneID:1173986;gbkey=Gene;gene=galM;locus_tag=YPO1135;pseudo=true
NC_003143.1	RefSeq	region	1282533	1282562	.	-	.	ID=id775;Note=PS00545 Aldose 1-epimerase  active site.;Dbxref=GeneID:1173986;gbkey=misc_feature;gene=galM
NC_003143.1	RefSeq	gene	1283086	1284237	.	-	.	ID=gene1097;Name=galK;Dbxref=GeneID:1173987;gbkey=Gene;gene=galK;locus_tag=YPO1137
NC_003143.1	RefSeq	CDS	1283086	1284237	.	-	0	ID=cds1045;Name=YP_002346177.1;Parent=gene1097;Note=catalyzes the formation of alpha-D-galactose 1-phosphate from D-galactose in galactose metabolism;Dbxref=InterPro:IPR000705,InterPro:IPR006203,InterPro:IPR006204,InterPro:IPR006206,InterPro:IPR013750,UniProtKB%2FTrEMBL:Q0WHR1,Genbank:YP_002346177.1,GeneID:1173987;gbkey=CDS;gene=galK;product=galactokinase;protein_id=YP_002346177.1;transl_table=11
NC_003143.1	RefSeq	region	1283842	1283877	.	-	.	ID=id776;Note=PS00627 GHMP kinases  ATP-binding domain.;Dbxref=GeneID:1173987;gbkey=misc_feature;gene=galK
NC_003143.1	RefSeq	region	1284124	1284159	.	-	.	ID=id777;Note=PS00106 Galactokinase signature.;Dbxref=GeneID:1173987;gbkey=misc_feature;gene=galK
NC_003143.1	RefSeq	gene	1284234	1285286	.	-	.	ID=gene1098;Name=galT;Dbxref=GeneID:1173988;gbkey=Gene;gene=galT;locus_tag=YPO1138
NC_003143.1	RefSeq	CDS	1284234	1285286	.	-	0	ID=cds1046;Name=YP_002346178.1;Parent=gene1098;Note=catalyzes the interconversion of UDP-galactose and galactose-1-P with UDP-galactose and glucose-1-P;Dbxref=InterPro:IPR001937,InterPro:IPR005849,InterPro:IPR005850,InterPro:IPR011573,UniProtKB%2FTrEMBL:Q7CH58,Genbank:YP_002346178.1,GeneID:1173988;gbkey=CDS;gene=galT;product=galactose-1-phosphate uridylyltransferase;protein_id=YP_002346178.1;transl_table=11
NC_003143.1	RefSeq	region	1284783	1284836	.	-	.	ID=id778;Note=PS00117 Galactose-1-phosphate uridyl transferase family 1 active site signature.;Dbxref=GeneID:1173988;gbkey=misc_feature;gene=galT
NC_003143.1	RefSeq	gene	1285296	1286312	.	-	.	ID=gene1099;Name=galE;Dbxref=GeneID:1173989;gbkey=Gene;gene=galE;locus_tag=YPO1139
NC_003143.1	RefSeq	CDS	1285296	1286312	.	-	0	ID=cds1047;Name=YP_002346179.1;Parent=gene1099;Dbxref=InterPro:IPR001509,InterPro:IPR005886,UniProtKB%2FTrEMBL:Q0WHQ9,Genbank:YP_002346179.1,GeneID:1173989;gbkey=CDS;gene=galE;product=UDP-galactose-4-epimerase;protein_id=YP_002346179.1;transl_table=11
NC_003143.1	RefSeq	gene	1286672	1287490	.	-	.	ID=gene1100;Name=YPO1140;Dbxref=GeneID:1173990;gbkey=Gene;locus_tag=YPO1140
NC_003143.1	RefSeq	CDS	1286672	1287490	.	-	0	ID=cds1048;Name=YP_002346180.1;Parent=gene1100;Dbxref=InterPro:IPR003675,UniProtKB%2FTrEMBL:Q7CH59,Genbank:YP_002346180.1,GeneID:1173990;gbkey=CDS;product=hypothetical protein;protein_id=YP_002346180.1;transl_table=11
NC_003143.1	RefSeq	gene	1287707	1289197	.	-	.	ID=gene1101;Name=modF;Dbxref=GeneID:1173991;gbkey=Gene;gene=modF;gene_synonym=phrA;locus_tag=YPO1142
NC_003143.1	RefSeq	CDS	1287707	1289197	.	-	0	ID=cds1049;Name=YP_002346181.1;Parent=gene1101;Note=contains 2 ATP-binding cassettes%3B involved in the transport of molybdenum;Dbxref=InterPro:IPR003439,InterPro:IPR003593,UniProtKB%2FTrEMBL:Q0WHQ7,Genbank:YP_002346181.1,GeneID:1173991;gbkey=CDS;gene=modF;product=molybdenum transport ATP-binding protein ModF;protein_id=YP_002346181.1;transl_table=11
NC_003143.1	RefSeq	region	1288298	1288321	.	-	.	ID=id779;Note=PS00017 ATP%2FGTP-binding site motif A %28P-loop%29.;Dbxref=GeneID:1173991;gbkey=misc_feature;gene=modF
NC_003143.1	RefSeq	region	1289069	1289092	.	-	.	ID=id780;Note=PS00017 ATP%2FGTP-binding site motif A %28P-loop%29.;Dbxref=GeneID:1173991;gbkey=misc_feature;gene=modF
NC_003143.1	RefSeq	gene	1289307	1290098	.	-	.	ID=gene1102;Name=modE;Dbxref=GeneID:1173992;gbkey=Gene;gene=modE;gene_synonym=modR;locus_tag=YPO1143
NC_003143.1	RefSeq	CDS	1289307	1290098	.	-	0	ID=cds1050;Name=YP_002346182.1;Parent=gene1102;Note=represses the modABCD operon and activates the moaABCD and napFDAGHBC operons;Dbxref=InterPro:IPR000847,InterPro:IPR003725,InterPro:IPR004606,InterPro:IPR005116,InterPro:IPR008995,InterPro:IPR011991,UniProtKB%2FTrEMBL:Q0WHQ6,Genbank:YP_002346182.1,GeneID:1173992;gbkey=CDS;gene=modE;product=DNA-binding transcriptional regulator ModE;protein_id=YP_002346182.1;transl_table=11
NC_003143.1	RefSeq	gene	1290415	1290567	.	+	.	ID=gene1103;Name=YPO1144;Dbxref=GeneID:1173993;gbkey=Gene;locus_tag=YPO1144
NC_003143.1	RefSeq	CDS	1290415	1290567	.	+	0	ID=cds1051;Name=YP_002346183.1;Parent=gene1103;Dbxref=UniProtKB%2FTrEMBL:Q7CH60,Genbank:YP_002346183.1,GeneID:1173993;gbkey=CDS;product=hypothetical protein;protein_id=YP_002346183.1;transl_table=11
NC_003143.1	RefSeq	region	1290433	1290501	.	+	.	ID=id781;Note=1 probable transmembrane helix predicted;Dbxref=GeneID:1173993;gbkey=misc_feature
NC_003143.1	RefSeq	gene	1290802	1291581	.	+	.	ID=gene1104;Name=modA;Dbxref=GeneID:1173994;gbkey=Gene;gene=modA;locus_tag=YPO1145
NC_003143.1	RefSeq	CDS	1290802	1291581	.	+	0	ID=cds1052;Name=YP_002346184.1;Parent=gene1104;Note=with ModCB is involved in the high-affinity transport of molybdate;Dbxref=InterPro:IPR005950,InterPro:IPR006059,InterPro:IPR011587,UniProtKB%2FTrEMBL:Q0WHQ4,Genbank:YP_002346184.1,GeneID:1173994;gbkey=CDS;gene=modA;product=molybdate transporter periplasmic protein;protein_id=YP_002346184.1;transl_table=11
NC_003143.1	RefSeq	region	1290826	1290885	.	+	.	ID=id782;Note=1 probable transmembrane helix predicted;Dbxref=GeneID:1173994;gbkey=misc_feature;gene=modA
NC_003143.1	RefSeq	gene	1291581	1292276	.	+	.	ID=gene1105;Name=modB;Dbxref=GeneID:1173995;gbkey=Gene;gene=modB;locus_tag=YPO1146
NC_003143.1	RefSeq	CDS	1291581	1292276	.	+	0	ID=cds1053;Name=YP_002346185.1;Parent=gene1105;Note=part of ModCBA molybdate transporter%3B member of ABC superfamily%3B inner membrane component%3B regulated by repressor protein ModE;Dbxref=InterPro:IPR000515,InterPro:IPR011867,UniProtKB%2FTrEMBL:Q7CH61,Genbank:YP_002346185.1,GeneID:1173995;gbkey=CDS;gene=modB;product=molybdate ABC transporter permease;protein_id=YP_002346185.1;transl_table=11
NC_003143.1	RefSeq	gene	1292270	1293349	.	+	.	ID=gene1106;Name=modC;Dbxref=GeneID:1173996;gbkey=Gene;gene=modC;gene_synonym=narD;locus_tag=YPO1147
NC_003143.1	RefSeq	CDS	1292270	1293349	.	+	0	ID=cds1054;Name=YP_002346186.1;Parent=gene1106;Note=Part of the ABC transporter complex modABC involved in molybdenum import;Dbxref=InterPro:IPR003439,InterPro:IPR003593,InterPro:IPR004606,InterPro:IPR005116,InterPro:IPR008995,InterPro:IPR011868,UniProtKB%2FTrEMBL:Q0WHQ2,Genbank:YP_002346186.1,GeneID:1173996;gbkey=CDS;gene=modC;product=molybdate transporter ATP-binding protein;protein_id=YP_002346186.1;transl_table=11
NC_003143.1	RefSeq	region	1292360	1292383	.	+	.	ID=id783;Note=PS00017 ATP%2FGTP-binding site motif A %28P-loop%29.;Dbxref=GeneID:1173996;gbkey=misc_feature;gene=modC
NC_003143.1	RefSeq	region	1292654	1292698	.	+	.	ID=id784;Note=PS00211 ABC transporters family signature.;Dbxref=GeneID:1173996;gbkey=misc_feature;gene=modC
NC_003143.1	RefSeq	gene	1293405	1294226	.	-	.	ID=gene1107;Name=YPO1148;Dbxref=GeneID:1173997;gbkey=Gene;locus_tag=YPO1148
NC_003143.1	RefSeq	CDS	1293405	1294226	.	-	0	ID=cds1055;Name=YP_002346187.1;Parent=gene1107;Note=YbhA%3B catalyzes the dephosphorylation of pyridoxal phosphate%2C fructose 1%2C6-bisphosphate%2C erythrose 4-phosphate and p-nitrophenyl phosphate%3B purine and pyrimidine nucleotides are secondary substrates%3B phosphotransferase activity observed when using monophosphates as phosphate donor%3B member of the haloacid dehalogenase-like hydrolases superfamily;Dbxref=InterPro:IPR000150,InterPro:IPR001757,InterPro:IPR006379,InterPro:IPR013200,UniProtKB%2FTrEMBL:Q7CH63,Genbank:YP_002346187.1,GeneID:1173997;gbkey=CDS;product=phosphotransferase;protein_id=YP_002346187.1;transl_table=11
NC_003143.1	RefSeq	region	1293498	1293566	.	-	.	ID=id785;Note=PS01229 Hypothetical cof family signature 2.;Dbxref=GeneID:1173997;gbkey=misc_feature
NC_003143.1	RefSeq	gene	1294517	1295521	.	+	.	ID=gene1108;Name=YPO1149;Dbxref=GeneID:1173998;gbkey=Gene;locus_tag=YPO1149
NC_003143.1	RefSeq	CDS	1294517	1295521	.	+	0	ID=cds1056;Name=YP_002346188.1;Parent=gene1108;Note=catalyzes the hydrolysis of 6-phosphogluconolactone to 6-phosphogluconate;Dbxref=UniProtKB%2FTrEMBL:Q0WHQ0,Genbank:YP_002346188.1,GeneID:1173998;gbkey=CDS;product=6-phosphogluconolactonase;protein_id=YP_002346188.1;transl_table=11
NC_003143.1	RefSeq	gene	1295706	1296974	.	-	.	ID=gene1109;Name=bioA;Dbxref=GeneID:1173999;gbkey=Gene;gene=bioA;locus_tag=YPO1150
NC_003143.1	RefSeq	CDS	1295706	1296974	.	-	0	ID=cds1057;Name=YP_002346189.1;Parent=gene1109;Note=catalyzes the formation of S-adenosyl-4-methylthionine-2-oxobutanoate and 7%2C8-diaminononanoate from S-adenosyl-L-methionine and 8-amino-7-oxononanoate;Dbxref=InterPro:IPR005814,InterPro:IPR005815,UniProtKB%2FTrEMBL:Q0WHP9,Genbank:YP_002346189.1,GeneID:1173999;gbkey=CDS;gene=bioA;product=adenosylmethionine-8-amino-7-oxononanoate aminotransferase;protein_id=YP_002346189.1;transl_table=11
NC_003143.1	RefSeq	region	1296138	1296251	.	-	.	ID=id786;Note=PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site.;Dbxref=GeneID:1173999;gbkey=misc_feature;gene=bioA
NC_003143.1	RefSeq	gene	1297073	1298110	.	+	.	ID=gene1110;Name=bioB;Dbxref=GeneID:1174000;gbkey=Gene;gene=bioB;locus_tag=YPO1151
NC_003143.1	RefSeq	CDS	1297073	1298110	.	+	0	ID=cds1058;Name=YP_002346190.1;Parent=gene1110;Dbxref=InterPro:IPR002684,InterPro:IPR006638,InterPro:IPR007197,InterPro:IPR010722,UniProtKB%2FTrEMBL:Q7CH65,Genbank:YP_002346190.1,GeneID:1174000;gbkey=CDS;gene=bioB;product=biotin synthase;protein_id=YP_002346190.1;transl_table=11
NC_003143.1	RefSeq	gene	1298110	1299261	.	+	.	ID=gene1111;Name=bioF;Dbxref=GeneID:1174001;gbkey=Gene;gene=bioF;locus_tag=YPO1152
NC_003143.1	RefSeq	CDS	1298110	1299261	.	+	0	ID=cds1059;Name=YP_002346191.1;Parent=gene1111;Note=catalyzes the formation of 8-amino-7-oxononanoate from 6-carboxyhexanoyl-CoA and L-alanine;Dbxref=InterPro:IPR001917,InterPro:IPR004723,InterPro:IPR004839,UniProtKB%2FTrEMBL:Q7CH66,Genbank:YP_002346191.1,GeneID:1174001;gbkey=CDS;gene=bioF;product=8-amino-7-oxononanoate synthase;protein_id=YP_002346191.1;transl_table=11
NC_003143.1	RefSeq	region	1298806	1298835	.	+	.	ID=id787;Note=PS00599 Aminotransferases class-II pyridoxal-phosphate attachment site.;Dbxref=GeneID:1174001;gbkey=misc_feature;gene=bioF
NC_003143.1	RefSeq	gene	1299245	1300048	.	+	.	ID=gene1112;Name=bioC;Dbxref=GeneID:1174002;gbkey=Gene;gene=bioC;locus_tag=YPO1153
NC_003143.1	RefSeq	CDS	1299245	1300048	.	+	0	ID=cds1060;Name=YP_002346192.1;Parent=gene1112;Dbxref=InterPro:IPR011814,InterPro:IPR013216,UniProtKB%2FTrEMBL:Q7CH67,Genbank:YP_002346192.1,GeneID:1174002;gbkey=CDS;gene=bioC;product=biotin synthesis protein BioC;protein_id=YP_002346192.1;transl_table=11
NC_003143.1	RefSeq	gene	1300041	1300763	.	+	.	ID=gene1113;Name=bioD;Dbxref=GeneID:1174003;gbkey=Gene;gene=bioD;locus_tag=YPO1154
NC_003143.1	RefSeq	CDS	1300041	1300763	.	+	0	ID=cds1061;Name=YP_002346193.1;Parent=gene1113;Note=DTB synthetase%3B dethiobiotin synthase%3B involved in production of dethiobiotin from ATP and 7%2C8-diaminononanoate and carbon dioxide%3B contains magnesium;Dbxref=InterPro:IPR002586,InterPro:IPR004472,UniProtKB%2FTrEMBL:Q0WHP5,Genbank:YP_002346193.1,GeneID:1174003;gbkey=CDS;gene=bioD;product=dithiobiotin synthetase;protein_id=YP_002346193.1;transl_table=11
NC_003143.1	RefSeq	gene	1300915	1301625	.	-	.	ID=gene1114;Name=YPO1155;Dbxref=GeneID:1174004;gbkey=Gene;locus_tag=YPO1155
NC_003143.1	RefSeq	CDS	1300915	1301625	.	-	0	ID=cds1062;Name=YP_002346194.1;Parent=gene1114;Dbxref=InterPro:IPR003439,InterPro:IPR003593,UniProtKB%2FTrEMBL:Q7CH68,Genbank:YP_002346194.1,GeneID:1174004;gbkey=CDS;product=amino acid transporter;protein_id=YP_002346194.1;transl_table=11
NC_003143.1	RefSeq	region	1301503	1301526	.	-	.	ID=id788;Note=PS00017 ATP%2FGTP-binding site motif A %28P-loop%29.;Dbxref=GeneID:1174004;gbkey=misc_feature
NC_003143.1	RefSeq	gene	1302715	1304730	.	+	.	ID=gene1115;Name=uvrB;Dbxref=GeneID:1174005;gbkey=Gene;gene=uvrB;locus_tag=YPO1156
NC_003143.1	RefSeq	CDS	1302715	1304730	.	+	0	ID=cds1063;Name=YP_002346195.1;Parent=gene1115;Note=The UvrABC repair system catalyzes the recognition and processing of DNA lesions. The beta-hairpin of the Uvr-B subunit is inserted between the strands%2C where it probes for the presence of a lesion;Dbxref=InterPro:IPR001650,InterPro:IPR001943,InterPro:IPR004807,InterPro:IPR006935,InterPro:IPR009055,InterPro:IPR014001,InterPro:IPR014021,UniProtKB%2FTrEMBL:Q0WHP3,Genbank:YP_002346195.1,GeneID:1174005;gbkey=CDS;gene=uvrB;product=excinuclease ABC subunit B;protein_id=YP_002346195.1;transl_table=11
NC_003143.1	RefSeq	region	1302829	1302852	.	+	.	ID=id789;Note=PS00017 ATP%2FGTP-binding site motif A %28P-loop%29.;Dbxref=GeneID:1174005;gbkey=misc_feature;gene=uvrB
NC_003143.1	RefSeq	gene	1305022	1305267	.	+	.	ID=gene1116;Name=YPO1157;Dbxref=GeneID:1174006;gbkey=Gene;locus_tag=YPO1157
NC_003143.1	RefSeq	CDS	1305022	1305267	.	+	0	ID=cds1064;Name=YP_002346196.1;Parent=gene1116;Dbxref=UniProtKB%2FTrEMBL:Q7CH69,Genbank:YP_002346196.1,GeneID:1174006;gbkey=CDS;product=hypothetical protein;protein_id=YP_002346196.1;transl_table=11
NC_003143.1	RefSeq	gene	1305398	1306321	.	-	.	ID=gene1117;Name=YPO1158;Dbxref=GeneID:1174007;gbkey=Gene;locus_tag=YPO1158
NC_003143.1	RefSeq	CDS	1305398	1306321	.	-	0	ID=cds1065;Name=YP_002346197.1;Parent=gene1117;Dbxref=InterPro:IPR002882,InterPro:IPR010119,UniProtKB%2FTrEMBL:Q0WHP1,Genbank:YP_002346197.1,GeneID:1174007;gbkey=CDS;product=hypothetical protein;protein_id=YP_002346197.1;transl_table=11
NC_003143.1	RefSeq	gene	1306853	1307833	.	+	.	ID=gene1118;Name=moaA;Dbxref=GeneID:1174008;gbkey=Gene;gene=moaA;gene_synonym=chlA,chlA1,moaA,narA;locus_tag=YPO1159
NC_003143.1	RefSeq	CDS	1306853	1307833	.	+	0	ID=cds1066;Name=YP_002346198.1;Parent=gene1118;Note=together with moaC%2C is involved in the conversion of a guanosine derivative %28GXP%29 into molybdopterin precursor Z;Dbxref=InterPro:IPR000385,InterPro:IPR006638,InterPro:IPR007197,InterPro:IPR010505,InterPro:IPR013483,UniProtKB%2FTrEMBL:Q0WHP0,Genbank:YP_002346198.1,GeneID:1174008;gbkey=CDS;gene=moaA;product=molybdenum cofactor biosynthesis protein A;protein_id=YP_002346198.1;transl_table=11
NC_003143.1	RefSeq	region	1306907	1306942	.	+	.	ID=id790;Note=PS01305 moaA %2F nifB %2F pqqE family signature.;Dbxref=GeneID:1174008;gbkey=misc_feature;gene=moaA
NC_003143.1	RefSeq	gene	1307934	1308413	.	+	.	ID=gene1119;Name=moaC;Dbxref=GeneID:1174009;gbkey=Gene;gene=moaC;locus_tag=YPO1160
NC_003143.1	RefSeq	CDS	1307934	1308413	.	+	0	ID=cds1067;Name=YP_002346199.1;Parent=gene1119;Note=MoaC%3B along with MoaA is involved in conversion of a guanosine derivative into molybdopterin precursor Z%3B involved in molybdenum cofactor biosynthesis;Dbxref=InterPro:IPR002820,InterPro:IPR012087,UniProtKB%2FTrEMBL:Q0WHN9,Genbank:YP_002346199.1,GeneID:1174009;gbkey=CDS;gene=moaC;product=molybdenum cofactor biosynthesis protein MoaC;protein_id=YP_002346199.1;transl_table=11
NC_003143.1	RefSeq	gene	1308410	1308655	.	+	.	ID=gene1120;Name=moaD;Dbxref=GeneID:1174010;gbkey=Gene;gene=moaD;gene_synonym=chlM,moaD;locus_tag=YPO1161
NC_003143.1	RefSeq	CDS	1308410	1308655	.	+	0	ID=cds1068;Name=YP_002346200.1;Parent=gene1120;Note=catalyzes the conversion of molybdopterin precursor Z into molybdopterin;Dbxref=InterPro:IPR003749,InterPro:IPR010034,UniProtKB%2FTrEMBL:Q7CH70,Genbank:YP_002346200.1,GeneID:1174010;gbkey=CDS;gene=moaD;product=molybdopterin synthase small subunit;protein_id=YP_002346200.1;transl_table=11
NC_003143.1	RefSeq	gene	1308655	1309110	.	+	.	ID=gene1121;Name=moaE;Dbxref=GeneID:1174011;gbkey=Gene;gene=moaE;locus_tag=YPO1162
NC_003143.1	RefSeq	CDS	1308655	1309110	.	+	0	ID=cds1069;Name=YP_002346201.1;Parent=gene1121;Note=catalyzes the conversion of molybdopterin precursor Z into molybdopterin;Dbxref=InterPro:IPR003448,Genbank:YP_002346201.1,GeneID:1174011;gbkey=CDS;gene=moaE;product=molybdopterin guanine dinucleotide biosynthesis protein MoaE;protein_id=YP_002346201.1;transl_table=11
NC_003143.1	RefSeq	gene	1309253	1309963	.	+	.	ID=gene1122;Name=YPO1163;Dbxref=GeneID:1174012;gbkey=Gene;locus_tag=YPO1163
NC_003143.1	RefSeq	CDS	1309253	1309963	.	+	0	ID=cds1070;Name=YP_002346202.1;Parent=gene1122;Dbxref=InterPro:IPR006214,UniProtKB%2FTrEMBL:Q7CH71,Genbank:YP_002346202.1,GeneID:1174012;gbkey=CDS;product=hypothetical protein;protein_id=YP_002346202.1;transl_table=11
NC_003143.1	RefSeq	repeat_region	1310053	1310764	.	+	.	ID=id791;Note=Contains a %27G%27 at nucleotide position 315%7EIS200-like insertion sequence:IS1541;gbkey=repeat_region
NC_003143.1	RefSeq	gene	1310198	1310656	.	+	.	ID=gene1123;Name=tnp;Dbxref=GeneID:1174013;gbkey=Gene;gene=tnp;locus_tag=YPO1164
NC_003143.1	RefSeq	CDS	1310198	1310656	.	+	0	ID=cds1071;Name=YP_002346203.1;Parent=gene1123;Dbxref=InterPro:IPR002686,UniProtKB%2FTrEMBL:Q74YM6,Genbank:YP_002346203.1,GeneID:1174013;gbkey=CDS;gene=tnp;product=transposase for the IS1541 insertion element;protein_id=YP_002346203.1;transl_table=11
NC_003143.1	RefSeq	gene	1310885	1312588	.	-	.	ID=gene1124;Name=betA;Dbxref=GeneID:1174014;gbkey=Gene;gene=betA;locus_tag=YPO1165
NC_003143.1	RefSeq	CDS	1310885	1312588	.	-	0	ID=cds1072;Name=YP_002346204.1;Parent=gene1124;Note=catalyzes the oxidation of choline to betaine aldehyde and betain aldehyde to glycine betaine;Dbxref=InterPro:IPR000172,InterPro:IPR007867,InterPro:IPR011533,InterPro:IPR012132,UniProtKB%2FTrEMBL:Q0WHN4,Genbank:YP_002346204.1,GeneID:1174014;gbkey=CDS;gene=betA;product=choline dehydrogenase;protein_id=YP_002346204.1;transl_table=11
NC_003143.1	RefSeq	region	1311770	1311814	.	-	.	ID=id792;Note=PS00624 GMC oxidoreductases signature 2.;Dbxref=GeneID:1174014;gbkey=misc_feature;gene=betA
NC_003143.1	RefSeq	region	1312274	1312345	.	-	.	ID=id793;Note=PS00623 GMC oxidoreductases signature 1.;Dbxref=GeneID:1174014;gbkey=misc_feature;gene=betA
NC_003143.1	RefSeq	gene	1312611	1314083	.	-	.	ID=gene1125;Name=betB;Dbxref=GeneID:1174015;gbkey=Gene;gene=betB;locus_tag=YPO1166
NC_003143.1	RefSeq	CDS	1312611	1314083	.	-	0	ID=cds1073;Name=YP_002346205.1;Parent=gene1125;Note=catalyzes the formation of betaine from betaine aldehyde;Dbxref=InterPro:IPR002086,InterPro:IPR011264,InterPro:IPR012303,UniProtKB%2FTrEMBL:Q0WHN3,Genbank:YP_002346205.1,GeneID:1174015;gbkey=CDS;gene=betB;product=betaine aldehyde dehydrogenase;protein_id=YP_002346205.1;transl_table=11
NC_003143.1	RefSeq	region	1313214	1313249	.	-	.	ID=id794;Note=PS00070 Aldehyde dehydrogenases cysteine active site.;Dbxref=GeneID:1174015;gbkey=misc_feature;gene=betB
NC_003143.1	RefSeq	region	1313310	1313333	.	-	.	ID=id795;Note=PS00687 Aldehyde dehydrogenases glutamic acid active site.;Dbxref=GeneID:1174015;gbkey=misc_feature;gene=betB
NC_003143.1	RefSeq	gene	1314141	1314737	.	-	.	ID=gene1126;Name=betI;Dbxref=GeneID:1174016;gbkey=Gene;gene=betI;locus_tag=YPO1167
NC_003143.1	RefSeq	CDS	1314141	1314737	.	-	0	ID=cds1074;Name=YP_002346206.1;Parent=gene1126;Note=HTH-type%3B bet1%3B Repressor involved in choline regulation of the bet genes;Dbxref=InterPro:IPR001647,InterPro:IPR009057,InterPro:IPR011075,InterPro:IPR012287,UniProtKB%2FTrEMBL:Q0WHN2,Genbank:YP_002346206.1,GeneID:1174016;gbkey=CDS;gene=betI;product=transcriptional regulator BetI;protein_id=YP_002346206.1;transl_table=11
NC_003143.1	RefSeq	region	1314537	1314584	.	-	.	ID=id796;Note=PS00038 Myc-type%2C %27helix-loop-helix%27 dimerization domain signature.;Dbxref=GeneID:1174016;gbkey=misc_feature;gene=betI
NC_003143.1	RefSeq	region	1314570	1314662	.	-	.	ID=id797;Note=PS01081 Bacterial regulatory proteins%2C tetR family signature.;Dbxref=GeneID:1174016;gbkey=misc_feature;gene=betI
NC_003143.1	RefSeq	region	1314585	1314650	.	-	.	ID=id798;Note=Predicted helix-turn-helix motif with score 1758 %28%2B5.17 SD%29 at aa 30-51%2C sequence ASIAQIAKRAGVSNGIISHYFR;Dbxref=GeneID:1174016;gbkey=misc_feature;gene=betI
NC_003143.1	RefSeq	gene	1315102	1317123	.	+	.	ID=gene1127;Name=betT;Dbxref=GeneID:1174017;gbkey=Gene;gene=betT;locus_tag=YPO1168
NC_003143.1	RefSeq	CDS	1315102	1317123	.	+	0	ID=cds1075;Name=YP_002346207.1;Parent=gene1127;Note=proton-motive-force-driven choline transporter;Dbxref=InterPro:IPR000060,UniProtKB%2FTrEMBL:Q0WHN1,Genbank:YP_002346207.1,GeneID:1174017;gbkey=CDS;gene=betT;product=choline transport protein BetT;protein_id=YP_002346207.1;transl_table=11
NC_003143.1	RefSeq	region	1316032	1316061	.	+	.	ID=id799;Note=PS01303 BCCT family of transporters signature.;Dbxref=GeneID:1174017;gbkey=misc_feature;gene=betT
NC_003143.1	RefSeq	gene	1317355	1318248	.	+	.	ID=gene1128;Name=YPO1169;Dbxref=GeneID:1174018;gbkey=Gene;locus_tag=YPO1169
NC_003143.1	RefSeq	CDS	1317355	1318248	.	+	0	ID=cds1076;Name=YP_002346208.1;Parent=gene1128;Dbxref=InterPro:IPR000847,InterPro:IPR005119,InterPro:IPR011991,UniProtKB%2FTrEMBL:Q74W91,Genbank:YP_002346208.1,GeneID:1174018;gbkey=CDS;product=DNA-binding transcriptional activator XapR;protein_id=YP_002346208.1;transl_table=11
NC_003143.1	RefSeq	region	1317427	1317492	.	+	.	ID=id800;Note=Predicted helix-turn-helix motif with score 1460 %28%2B4.16 SD%29 at aa 25-46%2C sequence LHFGKAAERLHISQPPLSLQIK;Dbxref=GeneID:1174018;gbkey=misc_feature
NC_003143.1	RefSeq	region	1317430	1317522	.	+	.	ID=id801;Note=PS00044 Bacterial regulatory proteins%2C lysR family signature.;Dbxref=GeneID:1174018;gbkey=misc_feature
NC_003143.1	RefSeq	gene	1318286	1319167	.	-	.	ID=gene1129;Name=YPO1170;Dbxref=GeneID:1174019;gbkey=Gene;locus_tag=YPO1170
NC_003143.1	RefSeq	CDS	1318286	1319167	.	-	0	ID=cds1077;Name=YP_002346209.1;Parent=gene1129;Dbxref=InterPro:IPR000620,UniProtKB%2FTrEMBL:Q74W92,Genbank:YP_002346209.1,GeneID:1174019;gbkey=CDS;product=hypothetical protein;protein_id=YP_002346209.1;transl_table=11
NC_003143.1	RefSeq	gene	1319480	1320343	.	+	.	ID=gene1130;Name=xapA;Dbxref=GeneID:1174020;gbkey=Gene;gene=xapA;locus_tag=YPO1171
NC_003143.1	RefSeq	CDS	1319480	1320343	.	+	0	ID=cds1078;Name=YP_002346210.1;Parent=gene1130;Note=catalyzes the formation of a purine and ribose phosphate from a purine nucleoside%3B in E. coli this enzyme functions in xanthosine degradation;Dbxref=InterPro:IPR001254,InterPro:IPR001369,InterPro:IPR010943,InterPro:IPR011268,UniProtKB%2FTrEMBL:Q74W93,Genbank:YP_002346210.1,GeneID:1174020;gbkey=CDS;gene=xapA;product=purine nucleoside phosphorylase;protein_id=YP_002346210.1;transl_table=11
NC_003143.1	RefSeq	gene	1320482	1321282	.	+	.	ID=gene1131;Name=YPO1172;Dbxref=GeneID:1174021;gbkey=Gene;locus_tag=YPO1172
NC_003143.1	RefSeq	CDS	1320482	1321282	.	+	0	ID=cds1079;Name=YP_008479690.1;Parent=gene1131;Dbxref=Genbank:YP_008479690.1,GeneID:1174021;gbkey=CDS;product=hypothetical protein;protein_id=YP_008479690.1;transl_table=11
NC_003143.1	RefSeq	region	1320482	1321126	.	+	.	ID=id802;Note=Gene interrupted by IS1541. Similar to Escherichia coli xanthosine permease XapB SW:XAPB_ECOLI %28P45562%29 %28418 aa%29 fasta scores: E%28%29: 0%2C 62.5%25 id in 216 aa%2C and to Escherichia coli nucleoside permease NupG nupG SW:NUPG_ECOLI %28P09452%29 %28418 aa%29 fasta scores: E%28%29: 0%2C 49.6%25 id in 248 aa;Dbxref=GeneID:1174021;gbkey=misc_feature;pseudo=true
NC_003143.1	RefSeq	repeat_region	1321127	1321838	.	+	.	ID=id803;Note=Contains a %27G%27 at nucleotide position 315%7EIS200-like insertion sequence:IS1541;gbkey=repeat_region
NC_003143.1	RefSeq	gene	1321272	1321730	.	+	.	ID=gene1132;Name=tnp;Dbxref=GeneID:1174022;gbkey=Gene;gene=tnp;locus_tag=YPO1173
NC_003143.1	RefSeq	CDS	1321272	1321730	.	+	0	ID=cds1080;Name=YP_002346211.1;Parent=gene1132;Dbxref=InterPro:IPR002686,UniProtKB%2FTrEMBL:Q74YM6,Genbank:YP_002346211.1,GeneID:1174022;gbkey=CDS;gene=tnp;product=transposase for the IS1541 insertion element;protein_id=YP_002346211.1;transl_table=11
NC_003143.1	RefSeq	gene	1322145	1323074	.	+	.	ID=gene1133;Name=YPO1174;Dbxref=GeneID:1174023;gbkey=Gene;locus_tag=YPO1174
NC_003143.1	RefSeq	CDS	1322145	1323074	.	+	0	ID=cds1081;Name=YP_002346212.1;Parent=gene1133;Note=no significant database hits;Dbxref=UniProtKB%2FTrEMBL:Q7CH73,Genbank:YP_002346212.1,GeneID:1174023;gbkey=CDS;product=hypothetical protein;protein_id=YP_002346212.1;transl_table=11
NC_003143.1	RefSeq	gene	1323368	1324312	.	+	.	ID=gene1134;Name=YPO1175;Dbxref=GeneID:1174024;gbkey=Gene;locus_tag=YPO1175
NC_003143.1	RefSeq	CDS	1323368	1324312	.	+	0	ID=cds1082;Name=YP_002346213.1;Parent=gene1134;Dbxref=InterPro:IPR001269,UniProtKB%2FTrEMBL:Q0WHM5,Genbank:YP_002346213.1,GeneID:1174024;gbkey=CDS;product=tRNA-dihydrouridine synthase C;protein_id=YP_002346213.1;transl_table=11
NC_003143.1	RefSeq	region	1323647	1323703	.	+	.	ID=id804;Note=PS01136 Uncharacterized protein family UPF0034 signature.;Dbxref=GeneID:1174024;gbkey=misc_feature
NC_003143.1	RefSeq	gene	1324386	1324565	.	-	.	ID=gene1135;Name=YPO1175a;Dbxref=GeneID:16744745;gbkey=Gene;locus_tag=YPO1175a
NC_003143.1	RefSeq	CDS	1324386	1324565	.	-	0	ID=cds1083;Name=YP_008479691.1;Parent=gene1135;Dbxref=Genbank:YP_008479691.1,GeneID:16744745;gbkey=CDS;product=membrane protein;protein_id=YP_008479691.1;transl_table=11
NC_003143.1	RefSeq	gene	1324904	1325839	.	+	.	ID=gene1136;Name=pbpG;Dbxref=GeneID:1174025;gbkey=Gene;gene=pbpG;locus_tag=YPO1176
NC_003143.1	RefSeq	CDS	1324904	1325839	.	+	0	ID=cds1084;Name=YP_002346214.1;Parent=gene1136;Note=specifically hydrolyze the DD-diaminopimelate-alanine bonds in high-molecular-mass murein sacculi%3B Penicillin-binding protein 7;Dbxref=InterPro:IPR001967,InterPro:IPR012338,UniProtKB%2FTrEMBL:Q7CH74,Genbank:YP_002346214.1,GeneID:1174025;gbkey=CDS;gene=pbpG;product=D-alanyl-D-alanine endopeptidase;protein_id=YP_002346214.1;transl_table=11
NC_003143.1	RefSeq	gene	1325960	1327675	.	-	.	ID=gene1137;Name=dld;Dbxref=GeneID:1174026;gbkey=Gene;gene=dld;locus_tag=YPO1177
NC_003143.1	RefSeq	CDS	1325960	1327675	.	-	0	ID=cds1085;Name=YP_002346215.1;Parent=gene1137;Note=component of the membrane-bound D-lactate oxidase%2C FAD-binding%2C NADH independent;Dbxref=InterPro:IPR006094,InterPro:IPR012256,UniProtKB%2FTrEMBL:Q7CH75,Genbank:YP_002346215.1,GeneID:1174026;gbkey=CDS;gene=dld;product=D-lactate dehydrogenase;protein_id=YP_002346215.1;transl_table=11
NC_003143.1	RefSeq	gene	1327882	1328421	.	+	.	ID=gene1138;Name=cyaB;Dbxref=GeneID:1174027;gbkey=Gene;gene=cyaB;locus_tag=YPO1178
NC_003143.1	RefSeq	CDS	1327882	1328421	.	+	0	ID=cds1086;Name=YP_002346216.1;Parent=gene1138;Dbxref=InterPro:IPR008172,InterPro:IPR008173,UniProtKB%2FTrEMBL:Q7CH76,Genbank:YP_002346216.1,GeneID:1174027;gbkey=CDS;gene=cyaB;product=adenylate cyclase;protein_id=YP_002346216.1;transl_table=11
NC_003143.1	RefSeq	gene	1328447	1328788	.	-	.	ID=gene1139;Name=YPO1179;Dbxref=GeneID:1174028;gbkey=Gene;locus_tag=YPO1179
NC_003143.1	RefSeq	CDS	1328447	1328788	.	-	0	ID=cds1087;Name=YP_002346217.1;Parent=gene1139;Dbxref=InterPro:IPR002711,InterPro:IPR003615,InterPro:IPR007087,UniProtKB%2FTrEMBL:Q0WHM1,Genbank:YP_002346217.1,GeneID:1174028;gbkey=CDS;product=hypothetical protein;protein_id=YP_002346217.1;transl_table=11
NC_003143.1	RefSeq	gene	1329101	1330204	.	+	.	ID=gene1140;Name=YPO1180;Dbxref=GeneID:1174029;gbkey=Gene;locus_tag=YPO1180
NC_003143.1	RefSeq	CDS	1329101	1330204	.	+	0	ID=cds1088;Name=YP_002346218.1;Parent=gene1140;Note=no significant database hits;Dbxref=UniProtKB%2FTrEMBL:Q7CH77,Genbank:YP_002346218.1,GeneID:1174029;gbkey=CDS;product=hypothetical protein;protein_id=YP_002346218.1;transl_table=11
NC_003143.1	RefSeq	gene	1330389	1330637	.	+	.	ID=gene1141;Name=YPO1181;Dbxref=GeneID:1174030;gbkey=Gene;locus_tag=YPO1181
NC_003143.1	RefSeq	CDS	1330389	1330637	.	+	0	ID=cds1089;Name=YP_002346219.2;Parent=gene1141;Dbxref=InterPro:IPR007341,UniProtKB%2FTrEMBL:Q74WC1,Genbank:YP_002346219.2,GeneID:1174030;gbkey=CDS;product=hypothetical protein;protein_id=YP_002346219.2;transl_table=11
NC_003143.1	RefSeq	gene	1330845	1331681	.	+	.	ID=gene1142;Name=YPO1182;Dbxref=GeneID:1174031;gbkey=Gene;locus_tag=YPO1182
NC_003143.1	RefSeq	CDS	1330845	1331681	.	+	0	ID=cds1090;Name=YP_002346220.1;Parent=gene1142;Dbxref=InterPro:IPR003439,InterPro:IPR003593,InterPro:IPR012693,UniProtKB%2FTrEMBL:Q0WHL8,Genbank:YP_002346220.1,GeneID:1174031;gbkey=CDS;product=ABC transporter ATP-binding protein;protein_id=YP_002346220.1;transl_table=11
NC_003143.1	RefSeq	region	1331016	1331039	.	+	.	ID=id805;Note=PS00017 ATP%2FGTP-binding site motif A %28P-loop%29.;Dbxref=GeneID:1174031;gbkey=misc_feature
NC_003143.1	RefSeq	region	1331364	1331408	.	+	.	ID=id806;Note=PS00211 ABC transporters family signature.;Dbxref=GeneID:1174031;gbkey=misc_feature
NC_003143.1	RefSeq	gene	1331718	1332647	.	+	.	ID=gene1143;Name=YPO1183;Dbxref=GeneID:1174032;gbkey=Gene;locus_tag=YPO1183
NC_003143.1	RefSeq	CDS	1331718	1332647	.	+	0	ID=cds1091;Name=YP_002346221.1;Parent=gene1143;Dbxref=InterPro:IPR005770,UniProtKB%2FTrEMBL:Q7CH78,Genbank:YP_002346221.1,GeneID:1174032;gbkey=CDS;product=substrate-binding periplasmic transport protein;protein_id=YP_002346221.1;transl_table=11
NC_003143.1	RefSeq	gene	1332810	1333610	.	+	.	ID=gene1144;Name=YPO1184;Dbxref=GeneID:1174033;gbkey=Gene;locus_tag=YPO1184
NC_003143.1	RefSeq	CDS	1332810	1333610	.	+	0	ID=cds1092;Name=YP_002346222.1;Parent=gene1144;Dbxref=InterPro:IPR000515,InterPro:IPR005769,UniProtKB%2FTrEMBL:Q0WHL6,Genbank:YP_002346222.1,GeneID:1174033;gbkey=CDS;product=ABC transport membrane permease;protein_id=YP_002346222.1;transl_table=11
NC_003143.1	RefSeq	gene	1333607	1334494	.	+	.	ID=gene1145;Name=YPO1185;Dbxref=GeneID:1174034;gbkey=Gene;locus_tag=YPO1185
NC_003143.1	RefSeq	CDS	1333607	1334494	.	+	0	ID=cds1093;Name=YP_002346223.1;Parent=gene1145;Dbxref=InterPro:IPR000515,InterPro:IPR005769,UniProtKB%2FTrEMBL:Q7CH79,Genbank:YP_002346223.1,GeneID:1174034;gbkey=CDS;product=ABC transport membrane permease;protein_id=YP_002346223.1;transl_table=11
NC_003143.1	RefSeq	gene	1334740	1335213	.	+	.	ID=gene1146;Name=YPO1186;Dbxref=GeneID:1174035;gbkey=Gene;locus_tag=YPO1186
NC_003143.1	RefSeq	CDS	1334740	1335213	.	+	0	ID=cds1094;Name=YP_002346224.1;Parent=gene1146;Dbxref=InterPro:IPR009921,UniProtKB%2FTrEMBL:Q7CH80,Genbank:YP_002346224.1,GeneID:1174035;gbkey=CDS;product=hypothetical protein;protein_id=YP_002346224.1;transl_table=11
NC_003143.1	RefSeq	gene	1335648	1336916	.	+	.	ID=gene1147;Name=YPO1187;Dbxref=GeneID:1174036;gbkey=Gene;locus_tag=YPO1187
NC_003143.1	RefSeq	CDS	1335648	1336916	.	+	0	ID=cds1095;Name=YP_002346225.1;Parent=gene1147;Dbxref=InterPro:IPR000709,UniProtKB%2FTrEMBL:Q0WHL3,Genbank:YP_002346225.1,GeneID:1174036;gbkey=CDS;product=substrate-binding periplasmic transport protein;protein_id=YP_002346225.1;transl_table=11
NC_003143.1	RefSeq	region	1335672	1335740	.	+	.	ID=id807;Note=1 probable transmembrane helix predicted;Dbxref=GeneID:1174036;gbkey=misc_feature
NC_003143.1	RefSeq	gene	1337040	1338641	.	+	.	ID=gene1148;Name=YPO1188;Dbxref=GeneID:1174037;gbkey=Gene;locus_tag=YPO1188
NC_003143.1	RefSeq	CDS	1337040	1338641	.	+	0	ID=cds1096;Name=YP_002346226.1;Parent=gene1148;Dbxref=InterPro:IPR001851,InterPro:IPR011989,UniProtKB%2FTrEMBL:Q0WHL2,Genbank:YP_002346226.1,GeneID:1174037;gbkey=CDS;product=branched-chain amino acid transporter permease;protein_id=YP_002346226.1;transl_table=11
NC_003143.1	RefSeq	gene	1338641	1339717	.	+	.	ID=gene1149;Name=YPO1189;Dbxref=GeneID:1174038;gbkey=Gene;locus_tag=YPO1189
NC_003143.1	RefSeq	CDS	1338641	1339717	.	+	0	ID=cds1097;Name=YP_002346227.1;Parent=gene1149;Dbxref=InterPro:IPR001851,UniProtKB%2FTrEMBL:Q74WC9,Genbank:YP_002346227.1,GeneID:1174038;gbkey=CDS;product=branched-chain amino acid transporter permease;protein_id=YP_002346227.1;transl_table=11
NC_003143.1	RefSeq	gene	1339714	1340550	.	+	.	ID=gene1150;Name=YPO1190;Dbxref=GeneID:1174039;gbkey=Gene;locus_tag=YPO1190
NC_003143.1	RefSeq	CDS	1339714	1340550	.	+	0	ID=cds1098;Name=YP_002346228.1;Parent=gene1150;Dbxref=InterPro:IPR003439,UniProtKB%2FTrEMBL:Q7CH81,Genbank:YP_002346228.1,GeneID:1174039;gbkey=CDS;product=ABC transporter ATP-binding protein;protein_id=YP_002346228.1;transl_table=11
NC_003143.1	RefSeq	region	1339921	1339944	.	+	.	ID=id808;Note=PS00017 ATP%2FGTP-binding site motif A %28P-loop%29.;Dbxref=GeneID:1174039;gbkey=misc_feature
NC_003143.1	RefSeq	gene	1340644	1341342	.	+	.	ID=gene1151;Name=YPO1191;Dbxref=GeneID:1174040;gbkey=Gene;locus_tag=YPO1191
NC_003143.1	RefSeq	CDS	1340644	1341342	.	+	0	ID=cds1099;Name=YP_002346229.1;Parent=gene1151;Dbxref=InterPro:IPR003439,InterPro:IPR003593,UniProtKB%2FTrEMBL:Q0WHK9,Genbank:YP_002346229.1,GeneID:1174040;gbkey=CDS;product=ABC transporter ATP-binding protein;protein_id=YP_002346229.1;transl_table=11
NC_003143.1	RefSeq	region	1340743	1340766	.	+	.	ID=id809;Note=PS00017 ATP%2FGTP-binding site motif A %28P-loop%29.;Dbxref=GeneID:1174040;gbkey=misc_feature
NC_003143.1	RefSeq	gene	1341457	1342314	.	+	.	ID=gene1152;Name=YPO1192;Dbxref=GeneID:1174041;gbkey=Gene;locus_tag=YPO1192
NC_003143.1	RefSeq	CDS	1341457	1342314	.	+	0	ID=cds1100;Name=YP_002346230.1;Parent=gene1152;Dbxref=UniProtKB%2FTrEMBL:Q7CH82,Genbank:YP_002346230.1,GeneID:1174041;gbkey=CDS;product=hypothetical protein;protein_id=YP_002346230.1;transl_table=11
NC_003143.1	RefSeq	gene	1342338	1343753	.	+	.	ID=gene1153;Name=YPO1193;Dbxref=GeneID:1174042;gbkey=Gene;locus_tag=YPO1193
NC_003143.1	RefSeq	CDS	1342338	1343753	.	+	0	ID=cds1101;Name=YP_002346231.1;Parent=gene1153;Dbxref=InterPro:IPR001952,InterPro:IPR002129,InterPro:IPR010977,UniProtKB%2FTrEMBL:Q7CH83,Genbank:YP_002346231.1,GeneID:1174042;gbkey=CDS;product=pyridoxal-dependent decarboxylase;protein_id=YP_002346231.1;transl_table=11
NC_003143.1	RefSeq	region	1342743	1342769	.	+	.	ID=id810;Note=PS00123 Alkaline phosphatase active site.;Dbxref=GeneID:1174042;gbkey=misc_feature
NC_003143.1	RefSeq	gene	1343908	1344762	.	-	.	ID=gene1154;Name=YPO1194;Dbxref=GeneID:1174043;gbkey=Gene;locus_tag=YPO1194
NC_003143.1	RefSeq	CDS	1343908	1344762	.	-	0	ID=cds1102;Name=YP_002346232.1;Parent=gene1154;Dbxref=InterPro:IPR001307,InterPro:IPR001763,UniProtKB%2FTrEMBL:Q7CH84,Genbank:YP_002346232.1,GeneID:1174043;gbkey=CDS;product=sulfurtransferase;protein_id=YP_002346232.1;transl_table=11
NC_003143.1	RefSeq	region	1343953	1343985	.	-	.	ID=id811;Note=PS00683 Rhodanese C-terminal signature.;Dbxref=GeneID:1174043;gbkey=misc_feature
NC_003143.1	RefSeq	region	1344601	1344636	.	-	.	ID=id812;Note=PS00380 Rhodanese signature 1.;Dbxref=GeneID:1174043;gbkey=misc_feature
NC_003143.1	RefSeq	gene	1345498	1346430	.	+	.	ID=gene1155;Name=YPO1195;Dbxref=GeneID:1174044;gbkey=Gene;locus_tag=YPO1195;pseudo=true
NC_003143.1	RefSeq	region	1345498	1346430	.	+	.	ID=id813;Note=Similar to Escherichia coli hypothetical 32.6 kDa protein in molR-bglX intergenic region precursor YehZ SW:YEHZ_ECOLI %28P33362%29 %28305 aa%29 fasta scores: E%28%29: 0%2C 70.8%25 id in 301 aa%2C and to Escherichia coli O157:H7  transport system permease protein YehZ TR:AAG57263 %28EMBL:AE005444%29 %28305 aa%29 fasta scores: E%28%29: 0%2C 70.5%25 id in 302 aa%2C and to Bacillus subtilis glycine betaine%2Fcarnitine%2Fcholine-binding protein precursor OpuCC SW:OPCC_BACSU %28O32243%29 %28303 aa%29 fasta scores: E%28%29: 1.5e-11%2C26.1%25 id in 303 aa. There is a stop codon at position 156. The sequence has been checked and is believed to be correct;Dbxref=GeneID:1174044;gbkey=misc_feature;pseudo=true
NC_003143.1	RefSeq	gene	1346691	1347845	.	+	.	ID=gene1156;Name=YPO1197;Dbxref=GeneID:1174045;gbkey=Gene;locus_tag=YPO1197
NC_003143.1	RefSeq	CDS	1346691	1347845	.	+	0	ID=cds1103;Name=YP_002346233.1;Parent=gene1156;Dbxref=InterPro:IPR000515,InterPro:IPR001991,UniProtKB%2FTrEMBL:Q7CH85,Genbank:YP_002346233.1,GeneID:1174045;gbkey=CDS;product=ABC transporter integral membrane protein;protein_id=YP_002346233.1;transl_table=11
NC_003143.1	RefSeq	region	1347522	1347608	.	+	.	ID=id814;Note=PS00402 Binding-protein-dependent transport systems inner membrane comp. sign.;Dbxref=GeneID:1174045;gbkey=misc_feature
NC_003143.1	RefSeq	gene	1347842	1348780	.	+	.	ID=gene1157;Name=YPO1198;Dbxref=GeneID:1174046;gbkey=Gene;locus_tag=YPO1198
NC_003143.1	RefSeq	CDS	1347842	1348780	.	+	0	ID=cds1104;Name=YP_002346234.1;Parent=gene1157;Dbxref=InterPro:IPR003439,InterPro:IPR003593,UniProtKB%2FTrEMBL:Q7CH86,Genbank:YP_002346234.1,GeneID:1174046;gbkey=CDS;product=ABC transporter ATP-binding protein;protein_id=YP_002346234.1;transl_table=11
NC_003143.1	RefSeq	region	1347941	1347964	.	+	.	ID=id815;Note=PS00017 ATP%2FGTP-binding site motif A %28P-loop%29.;Dbxref=GeneID:1174046;gbkey=misc_feature
NC_003143.1	RefSeq	region	1348247	1348291	.	+	.	ID=id816;Note=PS00211 ABC transporters family signature.;Dbxref=GeneID:1174046;gbkey=misc_feature
NC_003143.1	RefSeq	gene	1348777	1349613	.	+	.	ID=gene1158;Name=YPO1199;Dbxref=GeneID:1174047;gbkey=Gene;locus_tag=YPO1199
NC_003143.1	RefSeq	CDS	1348777	1349613	.	+	0	ID=cds1105;Name=YP_002346235.1;Parent=gene1158;Dbxref=InterPro:IPR000515,UniProtKB%2FTrEMBL:Q7CH87,Genbank:YP_002346235.1,GeneID:1174047;gbkey=CDS;product=ABC transporter integral membrane protein;protein_id=YP_002346235.1;transl_table=11
NC_003143.1	RefSeq	region	1349260	1349346	.	+	.	ID=id817;Note=PS00402 Binding-protein-dependent transport systems inner membrane comp. sign.;Dbxref=GeneID:1174047;gbkey=misc_feature
NC_003143.1	RefSeq	gene	1350091	1351425	.	+	.	ID=gene1159;Name=YPO1200;Dbxref=GeneID:1174048;gbkey=Gene;locus_tag=YPO1200
NC_003143.1	RefSeq	CDS	1350091	1351425	.	+	0	ID=cds1106;Name=YP_002346236.1;Parent=gene1159;Dbxref=InterPro:IPR002293,InterPro:IPR004841,UniProtKB%2FTrEMBL:Q0WHK2,Genbank:YP_002346236.1,GeneID:1174048;gbkey=CDS;product=arginine:agmatin antiporter;protein_id=YP_002346236.1;transl_table=11
NC_003143.1	RefSeq	gene	1351495	1353801	.	+	.	ID=gene1160;Name=YPO1201;Dbxref=GeneID:1174049;gbkey=Gene;locus_tag=YPO1201
NC_003143.1	RefSeq	CDS	1351495	1353801	.	+	0	ID=cds1107;Name=YP_002346237.1;Parent=gene1160;Dbxref=InterPro:IPR000310,InterPro:IPR005308,InterPro:IPR008286,InterPro:IPR011193,UniProtKB%2FTrEMBL:Q7CH88,Genbank:YP_002346237.1,GeneID:1174049;gbkey=CDS;product=amino acid decarboxylase;protein_id=YP_002346237.1;transl_table=11
NC_003143.1	RefSeq	region	1352674	1352718	.	+	.	ID=id818;Note=PS00703 Orn%2FLys%2FArg decarboxylases family 1 pyridoxal-P attachment site.;Dbxref=GeneID:1174049;gbkey=misc_feature
NC_003143.1	RefSeq	gene	1353919	1354137	.	-	.	ID=gene1161;Name=YPO1203a;Dbxref=GeneID:16744746;gbkey=Gene;locus_tag=YPO1203a
NC_003143.1	RefSeq	CDS	1353919	1354137	.	-	0	ID=cds1108;Name=YP_008479692.1;Parent=gene1161;Dbxref=Genbank:YP_008479692.1,GeneID:16744746;gbkey=CDS;product=hypothetical protein;protein_id=YP_008479692.1;transl_table=11
NC_003143.1	RefSeq	gene	1354247	1355137	.	-	.	ID=gene1162;Name=YPO1203;Dbxref=GeneID:1174050;gbkey=Gene;locus_tag=YPO1203
NC_003143.1	RefSeq	CDS	1354247	1355137	.	-	0	ID=cds1109;Name=YP_002346238.1;Parent=gene1162;Dbxref=InterPro:IPR000620,UniProtKB%2FTrEMBL:Q7CH89,Genbank:YP_002346238.1,GeneID:1174050;gbkey=CDS;product=hypothetical protein;protein_id=YP_002346238.1;transl_table=11
NC_003143.1	RefSeq	gene	1355549	1356664	.	-	.	ID=gene1163;Name=ompC2;Dbxref=GeneID:1174051;gbkey=Gene;gene=ompC2;locus_tag=YPO1205
NC_003143.1	RefSeq	CDS	1355549	1356664	.	-	0	ID=cds1110;Name=YP_002346239.1;Parent=gene1163;Dbxref=InterPro:IPR001702,InterPro:IPR001897,InterPro:IPR013793,UniProtKB%2FTrEMBL:Q74WE1,Genbank:YP_002346239.1,GeneID:1174051;gbkey=CDS;gene=ompC2;product=outer membrane protein OmpC;protein_id=YP_002346239.1;transl_table=11
NC_003143.1	RefSeq	region	1355639	1355689	.	-	.	ID=id819;Note=PS00576 General diffusion Gram-negative porins signature.;Dbxref=GeneID:1174051;gbkey=misc_feature;gene=ompC2
NC_003143.1	RefSeq	gene	1356934	1359114	.	+	.	ID=gene1164;Name=dinG;Dbxref=GeneID:1174052;gbkey=Gene;gene=dinG;gene_synonym=rarB;locus_tag=YPO1206
NC_003143.1	RefSeq	CDS	1356934	1359114	.	+	0	ID=cds1111;Name=YP_002346240.1;Parent=gene1164;Note=helicase involved in DNA repair and perhaps also replication;Dbxref=InterPro:IPR006555,InterPro:IPR014001,InterPro:IPR014013,UniProtKB%2FTrEMBL:Q7CH90,Genbank:YP_002346240.1,GeneID:1174052;gbkey=CDS;gene=dinG;product=ATP-dependent DNA helicase DinG;protein_id=YP_002346240.1;transl_table=11
NC_003143.1	RefSeq	region	1357093	1357116	.	+	.	ID=id820;Note=PS00017 ATP%2FGTP-binding site motif A %28P-loop%29.;Dbxref=GeneID:1174052;gbkey=misc_feature;gene=dinG
NC_003143.1	RefSeq	gene	1359182	1360624	.	-	.	ID=gene1165;Name=katA;Dbxref=GeneID:1174053;gbkey=Gene;gene=katA;locus_tag=YPO1207
NC_003143.1	RefSeq	CDS	1359182	1360624	.	-	0	ID=cds1112;Name=YP_002346241.1;Parent=gene1165;Dbxref=InterPro:IPR002226,InterPro:IPR011614,UniProtKB%2FTrEMBL:Q7CH91,Genbank:YP_002346241.1,GeneID:1174053;gbkey=CDS;gene=katA;product=catalase;protein_id=YP_002346241.1;transl_table=11
NC_003143.1	RefSeq	region	1360442	1360492	.	-	.	ID=id821;Note=PS00438 Catalase proximal active site signature.;Dbxref=GeneID:1174053;gbkey=misc_feature;gene=katA
NC_003143.1	RefSeq	gene	1360997	1361524	.	+	.	ID=gene1166;Name=YPO1208;Dbxref=GeneID:1174054;gbkey=Gene;locus_tag=YPO1208
NC_003143.1	RefSeq	CDS	1360997	1361524	.	+	0	ID=cds1113;Name=YP_002346242.1;Parent=gene1166;Dbxref=InterPro:IPR009998,UniProtKB%2FTrEMBL:Q0WHJ6,Genbank:YP_002346242.1,GeneID:1174054;gbkey=CDS;product=hypothetical protein;protein_id=YP_002346242.1;transl_table=11
NC_003143.1	RefSeq	gene	1361781	1362989	.	-	.	ID=gene1167;Name=tyrP;Dbxref=GeneID:1174055;gbkey=Gene;gene=tyrP;locus_tag=YPO1209
NC_003143.1	RefSeq	CDS	1361781	1362989	.	-	0	ID=cds1114;Name=YP_002346243.1;Parent=gene1167;Dbxref=InterPro:IPR002091,InterPro:IPR013059,InterPro:IPR013061,UniProtKB%2FTrEMBL:Q7CH92,Genbank:YP_002346243.1,GeneID:1174055;gbkey=CDS;gene=tyrP;product=tyrosine-specific transport protein;protein_id=YP_002346243.1;transl_table=11
NC_003143.1	RefSeq	region	1362891	1362941	.	-	.	ID=id822;Note=PS00594 Aromatic amino acids permeases signature.;Dbxref=GeneID:1174055;gbkey=misc_feature;gene=tyrP
NC_003143.1	RefSeq	gene	1363608	1364801	.	+	.	ID=gene1168;Name=YPO1210;Dbxref=GeneID:1174056;gbkey=Gene;locus_tag=YPO1210
NC_003143.1	RefSeq	CDS	1363608	1364801	.	+	0	ID=cds1115;Name=YP_002346244.1;Parent=gene1168;Dbxref=InterPro:IPR001453,InterPro:IPR008135,UniProtKB%2FTrEMBL:Q7CH93,Genbank:YP_002346244.1,GeneID:1174056;gbkey=CDS;product=competence damage-inducible protein A;protein_id=YP_002346244.1;transl_table=11
NC_003143.1	RefSeq	gene	1364859	1365368	.	-	.	ID=gene1169;Name=eco;Dbxref=GeneID:1174057;gbkey=Gene;gene=eco;gene_synonym=eti;locus_tag=YPO1211
NC_003143.1	RefSeq	CDS	1364859	1365368	.	-	0	ID=cds1116;Name=YP_002346245.1;Parent=gene1169;Note=serine protease inhibitor%2C inhibits trypsin and other proteases;Dbxref=InterPro:IPR005658,UniProtKB%2FTrEMBL:Q0WHJ3,Genbank:YP_002346245.1,GeneID:1174057;gbkey=CDS;gene=eco;product=ecotin;protein_id=YP_002346245.1;transl_table=11
NC_003143.1	RefSeq	gene	1365403	1365660	.	-	.	ID=gene1170;Name=YPO1212;Dbxref=GeneID:1174058;gbkey=Gene;locus_tag=YPO1212
NC_003143.1	RefSeq	CDS	1365403	1365660	.	-	0	ID=cds1117;Name=YP_002346246.1;Parent=gene1170;Note=plays a role in maintenance and possibly the biosynthesis of diferric-tyrosyl radical cofactor%2C essential for nucleotide reduction catalyzed by ribonucleotide reductases;Dbxref=InterPro:IPR001041,InterPro:IPR006058,InterPro:IPR012675,UniProtKB%2FTrEMBL:Q7CH94,Genbank:YP_002346246.1,GeneID:1174058;gbkey=CDS;product=2Fe-2S ferredoxin;protein_id=YP_002346246.1;transl_table=11
NC_003143.1	RefSeq	region	1365523	1365549	.	-	.	ID=id823;Note=PS00197 2Fe-2S ferredoxins%2C iron-sulfur binding region signature.;Dbxref=GeneID:1174058;gbkey=misc_feature
NC_003143.1	RefSeq	gene	1365664	1366794	.	-	.	ID=gene1171;Name=nrdB;Dbxref=GeneID:1174059;gbkey=Gene;gene=nrdB;locus_tag=YPO1213
NC_003143.1	RefSeq	CDS	1365664	1366794	.	-	0	ID=cds1118;Name=YP_002346247.1;Parent=gene1171;Note=B2 or R2 protein%3B type 1a enzyme%3B catalyzes the rate-limiting step in dNTP synthesis%3B converts nucleotides to deoxynucleotides%3B forms a homodimer and then a multimeric complex with NrdA;Dbxref=InterPro:IPR000358,InterPro:IPR009078,InterPro:IPR012348,UniProtKB%2FTrEMBL:Q0WHJ1,Genbank:YP_002346247.1,GeneID:1174059;gbkey=CDS;gene=nrdB;product=ribonucleotide-diphosphate reductase subunit beta;protein_id=YP_002346247.1;transl_table=11
NC_003143.1	RefSeq	region	1366402	1366452	.	-	.	ID=id824;Note=PS00368 Ribonucleotide reductase small subunit signature.;Dbxref=GeneID:1174059;gbkey=misc_feature;gene=nrdB
NC_003143.1	RefSeq	gene	1366957	1369245	.	-	.	ID=gene1172;Name=nrdA;Dbxref=GeneID:1174060;gbkey=Gene;gene=nrdA;locus_tag=YPO1214
NC_003143.1	RefSeq	CDS	1366957	1369245	.	-	0	ID=cds1119;Name=YP_002346248.1;Parent=gene1172;Note=Catalyzes the rate-limiting step in dNTP synthesis;Dbxref=InterPro:IPR000788,InterPro:IPR005144,InterPro:IPR008926,InterPro:IPR013346,InterPro:IPR013509,UniProtKB%2FTrEMBL:Q7CH95,Genbank:YP_002346248.1,GeneID:1174060;gbkey=CDS;gene=nrdA;product=ribonucleotide-diphosphate reductase subunit alpha;protein_id=YP_002346248.1;transl_table=11
NC_003143.1	RefSeq	region	1367383	1367451	.	-	.	ID=id825;Note=PS00089 Ribonucleotide reductase large subunit signature.;Dbxref=GeneID:1174060;gbkey=misc_feature;gene=nrdA
NC_003143.1	RefSeq	gene	1369739	1370467	.	-	.	ID=gene1173;Name=ubiG;Dbxref=GeneID:1174061;gbkey=Gene;gene=ubiG;locus_tag=YPO1215
NC_003143.1	RefSeq	CDS	1369739	1370467	.	-	0	ID=cds1120;Name=YP_002346249.1;Parent=gene1173;Note=Involved in ubiquinone biosynthesis;Dbxref=InterPro:IPR010233,InterPro:IPR013216,UniProtKB%2FTrEMBL:Q0WHI9,Genbank:YP_002346249.1,GeneID:1174061;gbkey=CDS;gene=ubiG;product=3-demethylubiquinone-9 3-methyltransferase;protein_id=YP_002346249.1;transl_table=11
NC_003143.1	RefSeq	gene	1370729	1373404	.	+	.	ID=gene1174;Name=gyrA;Dbxref=GeneID:1174062;gbkey=Gene;gene=gyrA;gene_synonym=hisW,nalA,parD;locus_tag=YPO1216
NC_003143.1	RefSeq	CDS	1370729	1373404	.	+	0	ID=cds1121;Name=YP_002346250.1;Parent=gene1174;Note=negatively supercoils closed circular double-stranded DNA;Dbxref=InterPro:IPR002205,InterPro:IPR005743,InterPro:IPR006691,InterPro:IPR013758,InterPro:IPR013760,UniProtKB%2FTrEMBL:Q7CH96,Genbank:YP_002346250.1,GeneID:1174062;gbkey=CDS;gene=gyrA;product=DNA gyrase subunit A;protein_id=YP_002346250.1;transl_table=11
NC_003143.1	RefSeq	gene	1373592	1376465	.	+	.	ID=gene1175;Name=rcsC;Dbxref=GeneID:1174063;gbkey=Gene;gene=rcsC;locus_tag=YPO1217
NC_003143.1	RefSeq	CDS	1373592	1376465	.	+	0	ID=cds1122;Name=YP_002346251.1;Parent=gene1175;Dbxref=InterPro:IPR001789,InterPro:IPR003594,InterPro:IPR003661,InterPro:IPR004358,InterPro:IPR005467,InterPro:IPR009082,InterPro:IPR011006,UniProtKB%2FTrEMBL:Q7CH97,Genbank:YP_002346251.1,GeneID:1174063;gbkey=CDS;gene=rcsC;product=hybrid sensory kinase in two-component regulatory system with RcsB and YojN;protein_id=YP_002346251.1;transl_table=11
NC_003143.1	RefSeq	gene	1376533	1377186	.	-	.	ID=gene1176;Name=rcsB;Dbxref=GeneID:1174064;gbkey=Gene;gene=rcsB;locus_tag=YPO1218
NC_003143.1	RefSeq	CDS	1376533	1377186	.	-	0	ID=cds1123;Name=YP_002346252.1;Parent=gene1176;Note=two-component response regulator RscB regulates the genes involved in capsule biosynthesis and cell division%3B probably phosphorylated by RcsC or RcsF;Dbxref=InterPro:IPR000792,InterPro:IPR001789,InterPro:IPR011006,InterPro:IPR011991,UniProtKB%2FTrEMBL:Q7CH98,Genbank:YP_002346252.1,GeneID:1174064;gbkey=CDS;gene=rcsB;product=transcriptional regulator RcsB;protein_id=YP_002346252.1;transl_table=11
NC_003143.1	RefSeq	region	1376611	1376694	.	-	.	ID=id826;Note=PS00622 Bacterial regulatory proteins%2C luxR family signature.;Dbxref=GeneID:1174064;gbkey=misc_feature;gene=rcsB
NC_003143.1	RefSeq	region	1376626	1376691	.	-	.	ID=id827;Note=Predicted helix-turn-helix motif with score 1127 %28%2B3.03 SD%29 at aa 166-187%2C sequence FLVTEIARKLNRSIKTISSQKK;Dbxref=GeneID:1174064;gbkey=misc_feature;gene=rcsB
NC_003143.1	RefSeq	gene	1377189	1379881	.	-	.	ID=gene1177;Name=YPO1219;Dbxref=GeneID:1174065;gbkey=Gene;locus_tag=YPO1219;pseudo=true
NC_003143.1	RefSeq	gene	1379905	1381059	.	-	.	ID=gene1178;Name=YPO1221;Dbxref=GeneID:1174066;gbkey=Gene;locus_tag=YPO1221
NC_003143.1	RefSeq	CDS	1379905	1381059	.	-	0	ID=cds1124;Name=YP_002346253.1;Parent=gene1178;Dbxref=InterPro:IPR007114,InterPro:IPR011701,UniProtKB%2FTrEMBL:Q7CH99,Genbank:YP_002346253.1,GeneID:1174066;gbkey=CDS;product=hypothetical protein;protein_id=YP_002346253.1;transl_table=11
NC_003143.1	RefSeq	gene	1381758	1381842	.	-	.	ID=gene1179;Name=micF;Dbxref=GeneID:1174067;gbkey=Gene;gene=micF;locus_tag=YPOs05
NC_003143.1	RefSeq	ncRNA	1381758	1381842	.	-	.	ID=rna26;Parent=gene1179;Note=Similar to regulatory antisense RNA affecting ompF expression%2C micF%2C 64%25 identity in a 95 nt overlap;Dbxref=GeneID:1174067;gbkey=ncRNA;gene=micF;ncrna_class=antisense_RNA;product=micF
NC_003143.1	RefSeq	exon	1381758	1381842	.	-	.	ID=id828;Parent=rna26;Note=Similar to regulatory antisense RNA affecting ompF expression%2C micF%2C 64%25 identity in a 95 nt overlap;Dbxref=GeneID:1174067;gbkey=ncRNA;gene=micF;ncrna_class=antisense_RNA;product=micF
NC_003143.1	RefSeq	gene	1382092	1383277	.	+	.	ID=gene1180;Name=ompC;Dbxref=GeneID:1174068;gbkey=Gene;gene=ompC;gene_synonym=par;locus_tag=YPO1222
NC_003143.1	RefSeq	five_prime_UTR	1382092	1382161	.	+	.	ID=id829;Note=acknowledging Delihas N.;Dbxref=GeneID:1174068;gbkey=5%27UTR;gene=ompC
NC_003143.1	RefSeq	CDS	1382162	1383277	.	+	0	ID=cds1125;Name=YP_002346254.1;Parent=gene1180;Note=allows for ions and hydrophilic solutes to cross the outer membrane;Dbxref=InterPro:IPR001702,InterPro:IPR001897,InterPro:IPR013793,UniProtKB%2FTrEMBL:Q0WHI4,Genbank:YP_002346254.1,GeneID:1174068;gbkey=CDS;gene=ompC;product=porin;protein_id=YP_002346254.1;transl_table=11
NC_003143.1	RefSeq	region	1383128	1383178	.	+	.	ID=id830;Note=PS00576 General diffusion Gram-negative porins signature.;Dbxref=GeneID:1174068;gbkey=misc_feature;gene=ompC
NC_003143.1	RefSeq	repeat_region	1383334	1384045	.	+	.	ID=id831;Note=Contains a %27G%27 at nucleotide position 315%7EIS200-like insertion sequence:IS1541;gbkey=repeat_region
NC_003143.1	RefSeq	gene	1383479	1383937	.	+	.	ID=gene1181;Name=tnp;Dbxref=GeneID:1174069;gbkey=Gene;gene=tnp;locus_tag=YPO1223
NC_003143.1	RefSeq	CDS	1383479	1383937	.	+	0	ID=cds1126;Name=YP_002346255.1;Parent=gene1181;Dbxref=InterPro:IPR002686,UniProtKB%2FTrEMBL:Q74YM6,Genbank:YP_002346255.1,GeneID:1174069;gbkey=CDS;gene=tnp;product=transposase for the IS1541 insertion element;protein_id=YP_002346255.1;transl_table=11
NC_003143.1	RefSeq	gene	1384371	1384458	.	+	.	ID=gene1182;Name=YPt_16;Dbxref=GeneID:1174070;gbkey=Gene;locus_tag=YPt_16
NC_003143.1	RefSeq	tRNA	1384371	1384458	.	+	.	ID=rna27;Parent=gene1182;Note=tRNA Ser anticodon TGA%2C Cove score 68.39;Dbxref=GeneID:1174070;gbkey=tRNA;product=tRNA-Ser
NC_003143.1	RefSeq	exon	1384371	1384458	.	+	.	ID=id832;Parent=rna27;Note=tRNA Ser anticodon TGA%2C Cove score 68.39;Dbxref=GeneID:1174070;gbkey=tRNA;product=tRNA-Ser
NC_003143.1	RefSeq	gene	1384464	1384539	.	+	.	ID=gene1183;Name=YPt_17;Dbxref=GeneID:1174071;gbkey=Gene;locus_tag=YPt_17
NC_003143.1	RefSeq	tRNA	1384464	1384539	.	+	.	ID=rna28;Parent=gene1183;Note=tRNA Thr anticodon TGT%2C Cove score 93.97;Dbxref=GeneID:1174071;gbkey=tRNA;product=tRNA-Thr
NC_003143.1	RefSeq	exon	1384464	1384539	.	+	.	ID=id833;Parent=rna28;Note=tRNA Thr anticodon TGT%2C Cove score 93.97;Dbxref=GeneID:1174071;gbkey=tRNA;product=tRNA-Thr
NC_003143.1	RefSeq	gene	1384727	1385893	.	-	.	ID=gene1184;Name=ampH;Dbxref=GeneID:1174072;gbkey=Gene;gene=ampH;locus_tag=YPO1224
NC_003143.1	RefSeq	CDS	1384727	1385893	.	-	0	ID=cds1127;Name=YP_002346256.1;Parent=gene1184;Note=this protein has no known enzymatic function;Dbxref=InterPro:IPR001466,InterPro:IPR012338,UniProtKB%2FTrEMBL:Q7CHA2,Genbank:YP_002346256.1,GeneID:1174072;gbkey=CDS;gene=ampH;product=beta-lactam binding protein AmpH;protein_id=YP_002346256.1;transl_table=11
NC_003143.1	RefSeq	gene	1386168	1387664	.	-	.	ID=gene1185;Name=YPO1226;Dbxref=GeneID:1174073;gbkey=Gene;locus_tag=YPO1226
NC_003143.1	RefSeq	CDS	1386168	1387664	.	-	0	ID=cds1128;Name=YP_002346257.1;Parent=gene1185;Dbxref=UniProtKB%2FTrEMBL:Q0WHI1,Genbank:YP_002346257.1,GeneID:1174073;gbkey=CDS;product=transport protein;protein_id=YP_002346257.1;transl_table=11
NC_003143.1	RefSeq	gene	1388071	1389099	.	+	.	ID=gene1186;Name=YPO1228;Dbxref=GeneID:1174074;gbkey=Gene;locus_tag=YPO1228
NC_003143.1	RefSeq	CDS	1388071	1389099	.	+	0	ID=cds1129;Name=YP_002346258.1;Parent=gene1186;Dbxref=InterPro:IPR001279,UniProtKB%2FTrEMBL:Q7CHA3,Genbank:YP_002346258.1,GeneID:1174074;gbkey=CDS;product=hypothetical protein;protein_id=YP_002346258.1;transl_table=11
NC_003143.1	RefSeq	gene	1389173	1390960	.	-	.	ID=gene1187;Name=cheD2;Dbxref=GeneID:1174075;gbkey=Gene;gene=cheD2;gene_synonym=tsr2;locus_tag=YPO1229
NC_003143.1	RefSeq	CDS	1389173	1390960	.	-	0	ID=cds1130;Name=YP_002346259.1;Parent=gene1187;Dbxref=InterPro:IPR003660,InterPro:IPR004010,InterPro:IPR004089,UniProtKB%2FTrEMBL:Q0WHH9,Genbank:YP_002346259.1,GeneID:1174075;gbkey=CDS;gene=cheD2;product=methyl-accepting chemotaxis protein;protein_id=YP_002346259.1;transl_table=11
NC_003143.1	RefSeq	gene	1391382	1392317	.	-	.	ID=gene1188;Name=pla2;Dbxref=GeneID:1174076;gbkey=Gene;gene=pla2;locus_tag=YPO1231
NC_003143.1	RefSeq	CDS	1391382	1392317	.	-	0	ID=cds1131;Name=YP_002346260.1;Parent=gene1188;Note=outer membrane protease%3B involved in virulence in many organisms%3B OmpT%3B IcsP%3B SopA%3B Pla%3B PgtE%3B omptin%3B in Escherichia coli OmpT can degrade antimicrobial peptides%3B in Yersinia Pla activates plasminogen during infection%3B in Shigella flexneria SopA cleaves the autotransporter IcsA;Dbxref=InterPro:IPR000036,UniProtKB%2FTrEMBL:Q7CHA4,Genbank:YP_002346260.1,GeneID:1174076;gbkey=CDS;gene=pla2;product=outer membrane protease;protein_id=YP_002346260.1;transl_table=11
NC_003143.1	RefSeq	gene	1392489	1392731	.	-	.	ID=gene1189;Name=dinI;Dbxref=GeneID:1174077;gbkey=Gene;gene=dinI;gene_synonym=msgA;locus_tag=YPO1232
NC_003143.1	RefSeq	CDS	1392489	1392731	.	-	0	ID=cds1132;Name=YP_002346261.1;Parent=gene1189;Dbxref=InterPro:IPR000629,InterPro:IPR010391,UniProtKB%2FTrEMBL:Q7CHA5,Genbank:YP_002346261.1,GeneID:1174077;gbkey=CDS;gene=dinI;product=stress response protein;protein_id=YP_002346261.1;transl_table=11
NC_003143.1	RefSeq	gene	1392937	1393659	.	-	.	ID=gene1190;Name=YPO1233;Dbxref=GeneID:1174078;gbkey=Gene;locus_tag=YPO1233
NC_003143.1	RefSeq	CDS	1392937	1393659	.	-	0	ID=cds1133;Name=YP_002346262.1;Parent=gene1190;Dbxref=InterPro:IPR001387,InterPro:IPR006198,InterPro:IPR010982,InterPro:IPR011056,UniProtKB%2FTrEMBL:Q7CHA6,Genbank:YP_002346262.1,GeneID:1174078;gbkey=CDS;product=prophage repressor protein;protein_id=YP_002346262.1;transl_table=11
NC_003143.1	RefSeq	region	1393507	1393572	.	-	.	ID=id834;Note=Predicted helix-turn-helix motif with score 1936 %28%2B5.78 SD%29 at aa 30-51%2C sequence ISQESVAHELGVGQSAVNQFLN;Dbxref=GeneID:1174078;gbkey=misc_feature
NC_003143.1	RefSeq	gene	1393933	1394412	.	+	.	ID=gene1191;Name=YPO1234;Dbxref=GeneID:1174079;gbkey=Gene;locus_tag=YPO1234
NC_003143.1	RefSeq	CDS	1393933	1394412	.	+	0	ID=cds1134;Name=YP_002346263.1;Parent=gene1191;Dbxref=InterPro:IPR010534,UniProtKB%2FTrEMBL:Q7CHA7,Genbank:YP_002346263.1,GeneID:1174079;gbkey=CDS;product=phage antitermination protein Q;protein_id=YP_002346263.1;transl_table=11
NC_003143.1	RefSeq	gene	1394614	1395927	.	+	.	ID=gene1192;Name=YPO1235;Dbxref=GeneID:1174080;gbkey=Gene;locus_tag=YPO1235
NC_003143.1	RefSeq	CDS	1394614	1395927	.	+	0	ID=cds1135;Name=YP_002346264.1;Parent=gene1192;Dbxref=InterPro:IPR010737,UniProtKB%2FTrEMBL:Q7CHA8,Genbank:YP_002346264.1,GeneID:1174080;gbkey=CDS;product=hypothetical protein;protein_id=YP_002346264.1;transl_table=11
NC_003143.1	RefSeq	gene	1395924	1396535	.	+	.	ID=gene1193;Name=YPO1236;Dbxref=GeneID:1174081;gbkey=Gene;locus_tag=YPO1236
NC_003143.1	RefSeq	CDS	1395924	1396535	.	+	0	ID=cds1136;Name=YP_002346265.1;Parent=gene1193;Dbxref=InterPro:IPR001303,UniProtKB%2FTrEMBL:Q0WHH3,Genbank:YP_002346265.1,GeneID:1174081;gbkey=CDS;product=aldolase;protein_id=YP_002346265.1;transl_table=11
NC_003143.1	RefSeq	gene	1396615	1397430	.	+	.	ID=gene1194;Name=YPO1237;Dbxref=GeneID:1174082;gbkey=Gene;locus_tag=YPO1237
NC_003143.1	RefSeq	CDS	1396615	1397430	.	+	0	ID=cds1137;Name=YP_002346266.1;Parent=gene1194;Dbxref=InterPro:IPR001034,InterPro:IPR011991,UniProtKB%2FTrEMBL:Q7CHA9,Genbank:YP_002346266.1,GeneID:1174082;gbkey=CDS;product=transcriptional regulator;protein_id=YP_002346266.1;transl_table=11
NC_003143.1	RefSeq	region	1396636	1396740	.	+	.	ID=id835;Note=PS00894 Bacterial regulatory proteins%2C deoR family signature.;Dbxref=GeneID:1174082;gbkey=misc_feature
NC_003143.1	RefSeq	region	1396678	1396743	.	+	.	ID=id836;Note=Predicted helix-turn-helix motif with score 1754 %28%2B5.16 SD%29 at aa 22-43%2C sequence ASFMDLAELMNVSHMTVRRDIQ;Dbxref=GeneID:1174082;gbkey=misc_feature
NC_003143.1	RefSeq	gene	1397448	1398200	.	+	.	ID=gene1195;Name=YPO1238;Dbxref=GeneID:1174083;gbkey=Gene;locus_tag=YPO1238
NC_003143.1	RefSeq	CDS	1397448	1398200	.	+	0	ID=cds1138;Name=YP_002346267.1;Parent=gene1195;Dbxref=InterPro:IPR012307,UniProtKB%2FTrEMBL:Q0WHH1,Genbank:YP_002346267.1,GeneID:1174083;gbkey=CDS;product=hypothetical protein;protein_id=YP_002346267.1;transl_table=11
NC_003143.1	RefSeq	gene	1398814	1399104	.	+	.	ID=gene1196;Name=YPO1239;Dbxref=GeneID:1174084;gbkey=Gene;locus_tag=YPO1239
NC_003143.1	RefSeq	CDS	1398814	1399104	.	+	0	ID=cds1139;Name=YP_002346268.1;Parent=gene1196;Dbxref=UniProtKB%2FTrEMBL:Q7CHB0,Genbank:YP_002346268.1,GeneID:1174084;gbkey=CDS;product=bacteriophage protein;protein_id=YP_002346268.1;transl_table=11
NC_003143.1	RefSeq	region	1398856	1398924	.	+	.	ID=id837;Note=1 probable transmembrane helix predicted;Dbxref=GeneID:1174084;gbkey=misc_feature
NC_003143.1	RefSeq	gene	1399150	1399767	.	+	.	ID=gene1197;Name=YPO1240;Dbxref=GeneID:1174085;gbkey=Gene;locus_tag=YPO1240
NC_003143.1	RefSeq	CDS	1399150	1399767	.	+	0	ID=cds1140;Name=YP_002346269.1;Parent=gene1197;Note=no significant database hits;Dbxref=UniProtKB%2FTrEMBL:Q0WHG9,Genbank:YP_002346269.1,GeneID:1174085;gbkey=CDS;product=ATP-binding protein;protein_id=YP_002346269.1;transl_table=11
NC_003143.1	RefSeq	region	1399228	1399251	.	+	.	ID=id838;Note=PS00017 ATP%2FGTP-binding site motif A %28P-loop%29.;Dbxref=GeneID:1174085;gbkey=misc_feature
NC_003143.1	RefSeq	gene	1399772	1399966	.	+	.	ID=gene1198;Name=YPO1241;Dbxref=GeneID:1174086;gbkey=Gene;locus_tag=YPO1241
NC_003143.1	RefSeq	CDS	1399772	1399966	.	+	0	ID=cds1141;Name=YP_002346270.1;Parent=gene1198;Dbxref=UniProtKB%2FTrEMBL:Q74WH1,Genbank:YP_002346270.1,GeneID:1174086;gbkey=CDS;product=bacteriophage protein;protein_id=YP_002346270.1;transl_table=11
NC_003143.1	RefSeq	gene	1399963	1401471	.	+	.	ID=gene1199;Name=YPO1242;Dbxref=GeneID:1174087;gbkey=Gene;locus_tag=YPO1242
NC_003143.1	RefSeq	CDS	1399963	1401471	.	+	0	ID=cds1142;Name=YP_002346271.1;Parent=gene1199;Dbxref=InterPro:IPR009375,UniProtKB%2FTrEMBL:Q7CHB1,Genbank:YP_002346271.1,GeneID:1174087;gbkey=CDS;product=bacteriophage tail sheath protein;protein_id=YP_002346271.1;transl_table=11
NC_003143.1	RefSeq	gene	1401493	1401861	.	+	.	ID=gene1200;Name=YPO1243;Dbxref=GeneID:1174088;gbkey=Gene;locus_tag=YPO1243
NC_003143.1	RefSeq	CDS	1401493	1401861	.	+	0	ID=cds1143;Name=YP_002346272.1;Parent=gene1200;Note=no significant database hits;Dbxref=UniProtKB%2FTrEMBL:Q7CHB2,Genbank:YP_002346272.1,GeneID:1174088;gbkey=CDS;product=hypothetical protein;protein_id=YP_002346272.1;transl_table=11
NC_003143.1	RefSeq	gene	1401863	1402162	.	+	.	ID=gene1201;Name=YPO1244;Dbxref=GeneID:1174089;gbkey=Gene;locus_tag=YPO1244
NC_003143.1	RefSeq	CDS	1401863	1402162	.	+	0	ID=cds1144;Name=YP_002346273.1;Parent=gene1201;Note=no significant database hits;Dbxref=UniProtKB%2FTrEMBL:Q7CHB3,Genbank:YP_002346273.1,GeneID:1174089;gbkey=CDS;product=hypothetical protein;protein_id=YP_002346273.1;transl_table=11
NC_003143.1	RefSeq	gene	1402283	1403776	.	+	.	ID=gene1202;Name=YPO1245;Dbxref=GeneID:1174090;gbkey=Gene;locus_tag=YPO1245
NC_003143.1	RefSeq	CDS	1402283	1403776	.	+	0	ID=cds1145;Name=YP_002346274.1;Parent=gene1202;Dbxref=UniProtKB%2FTrEMBL:Q7CHB4,Genbank:YP_002346274.1,GeneID:1174090;gbkey=CDS;product=bacteriophage coat protein;protein_id=YP_002346274.1;transl_table=11
NC_003143.1	RefSeq	STS	1403285	1404705	.	+	.	ID=id839;Dbxref=UniSTS:141486;gbkey=STS
NC_003143.1	RefSeq	gene	1404043	1405449	.	+	.	ID=gene1203;Name=YPO1246;Dbxref=GeneID:1174091;gbkey=Gene;locus_tag=YPO1246
NC_003143.1	RefSeq	CDS	1404043	1405449	.	+	0	ID=cds1146;Name=YP_002346275.1;Parent=gene1203;Dbxref=InterPro:IPR009826,UniProtKB%2FTrEMBL:Q7CHB5,Genbank:YP_002346275.1,GeneID:1174091;gbkey=CDS;product=bacteriophage protein;protein_id=YP_002346275.1;transl_table=11
NC_003143.1	RefSeq	gene	1405446	1406501	.	+	.	ID=gene1204;Name=YPO1247;Dbxref=GeneID:1174092;gbkey=Gene;locus_tag=YPO1247
NC_003143.1	RefSeq	CDS	1405446	1406501	.	+	0	ID=cds1147;Name=YP_002346276.1;Parent=gene1204;Dbxref=InterPro:IPR010689,UniProtKB%2FTrEMBL:Q7CHB6,Genbank:YP_002346276.1,GeneID:1174092;gbkey=CDS;product=bacteriophage tail protein;protein_id=YP_002346276.1;transl_table=11
NC_003143.1	RefSeq	gene	1406517	1407113	.	+	.	ID=gene1205;Name=YPO1248;Dbxref=GeneID:1174093;gbkey=Gene;locus_tag=YPO1248
NC_003143.1	RefSeq	CDS	1406517	1407113	.	+	0	ID=cds1148;Name=YP_002346277.1;Parent=gene1205;Dbxref=InterPro:IPR010688,InterPro:IPR013046,UniProtKB%2FTrEMBL:Q7CHB7,Genbank:YP_002346277.1,GeneID:1174093;gbkey=CDS;product=bacteriophage baseplate assembly protein;protein_id=YP_002346277.1;transl_table=11
NC_003143.1	RefSeq	gene	1407110	1407565	.	+	.	ID=gene1206;Name=YPO1249;Dbxref=GeneID:1174094;gbkey=Gene;locus_tag=YPO1249
NC_003143.1	RefSeq	CDS	1407110	1407565	.	+	0	ID=cds1149;Name=YP_002346278.1;Parent=gene1206;Dbxref=InterPro:IPR010877,UniProtKB%2FTrEMBL:Q7CHB8,Genbank:YP_002346278.1,GeneID:1174094;gbkey=CDS;product=bacteriophage protein GP46;protein_id=YP_002346278.1;transl_table=11
NC_003143.1	RefSeq	gene	1407569	1408705	.	+	.	ID=gene1207;Name=YPO1250;Dbxref=GeneID:1174095;gbkey=Gene;locus_tag=YPO1250
NC_003143.1	RefSeq	CDS	1407569	1408705	.	+	0	ID=cds1150;Name=YP_002346279.1;Parent=gene1207;Dbxref=InterPro:IPR006949,UniProtKB%2FTrEMBL:Q7CHB9,Genbank:YP_002346279.1,GeneID:1174095;gbkey=CDS;product=bacteriophage protein;protein_id=YP_002346279.1;transl_table=11
NC_003143.1	RefSeq	gene	1408702	1408962	.	+	.	ID=gene1208;Name=YPO1250a;Dbxref=GeneID:1174096;gbkey=Gene;locus_tag=YPO1250a
NC_003143.1	RefSeq	CDS	1408702	1408962	.	+	0	ID=cds1151;Name=YP_002346280.1;Parent=gene1208;Dbxref=UniProtKB%2FTrEMBL:Q7CHC0,Genbank:YP_002346280.1,GeneID:1174096;gbkey=CDS;product=bacteriophage protein;protein_id=YP_002346280.1;transl_table=11
NC_003143.1	RefSeq	gene	1408959	1409306	.	+	.	ID=gene1209;Name=YPO1251;Dbxref=GeneID:1174097;gbkey=Gene;locus_tag=YPO1251
NC_003143.1	RefSeq	CDS	1408959	1409306	.	+	0	ID=cds1152;Name=YP_002346281.1;Parent=gene1209;Dbxref=UniProtKB%2FTrEMBL:Q74WI2,Genbank:YP_002346281.1,GeneID:1174097;gbkey=CDS;product=bacteriophage protein;protein_id=YP_002346281.1;transl_table=11
NC_003143.1	RefSeq	gene	1409403	1410182	.	+	.	ID=gene1210;Name=stf;Dbxref=GeneID:1174098;gbkey=Gene;gene=stf;locus_tag=YPO1252
NC_003143.1	RefSeq	CDS	1409403	1410182	.	+	0	ID=cds1153;Name=YP_002346282.1;Parent=gene1210;Dbxref=InterPro:IPR011083,UniProtKB%2FTrEMBL:Q7CHC1,Genbank:YP_002346282.1,GeneID:1174098;gbkey=CDS;gene=stf;product=bacteriophage tail fiber protein;protein_id=YP_002346282.1;transl_table=11
NC_003143.1	RefSeq	gene	1410480	1411220	.	+	.	ID=gene1211;Name=YPO1253;Dbxref=GeneID:1174099;gbkey=Gene;locus_tag=YPO1253
NC_003143.1	RefSeq	CDS	1410480	1411220	.	+	0	ID=cds1154;Name=YP_002346283.1;Parent=gene1211;Dbxref=InterPro:IPR000281,InterPro:IPR000843,InterPro:IPR001347,InterPro:IPR009061,UniProtKB%2FTrEMBL:Q7CHC2,Genbank:YP_002346283.1,GeneID:1174099;gbkey=CDS;product=LacI family regulatory protein;protein_id=YP_002346283.1;transl_table=11
NC_003143.1	RefSeq	region	1410570	1410635	.	+	.	ID=id840;Note=Predicted helix-turn-helix motif with score 1754 %28%2B5.16 SD%29 at aa 31-52%2C sequence MTIRELADASGVSTTTVLRFCK;Dbxref=GeneID:1174099;gbkey=misc_feature
NC_003143.1	RefSeq	region	1410576	1410632	.	+	.	ID=id841;Note=PS00356 Bacterial regulatory proteins%2C lacI family signature.;Dbxref=GeneID:1174099;gbkey=misc_feature
NC_003143.1	RefSeq	gene	1411511	1412947	.	+	.	ID=gene1212;Name=bglA;Dbxref=GeneID:1174100;gbkey=Gene;gene=bglA;locus_tag=YPO1254
NC_003143.1	RefSeq	CDS	1411511	1412947	.	+	0	ID=cds1155;Name=YP_002346284.1;Parent=gene1212;Dbxref=InterPro:IPR001360,InterPro:IPR013781,UniProtKB%2FTrEMBL:Q0WHF4,Genbank:YP_002346284.1,GeneID:1174100;gbkey=CDS;gene=bglA;product=6-phospho-beta-glucosidase;protein_id=YP_002346284.1;transl_table=11
NC_003143.1	RefSeq	region	1411538	1411582	.	+	.	ID=id842;Note=PS00653 Glycosyl hydrolases family 1 N-terminal signature.;Dbxref=GeneID:1174100;gbkey=misc_feature;gene=bglA
NC_003143.1	RefSeq	region	1412624	1412650	.	+	.	ID=id843;Note=PS00572 Glycosyl hydrolases family 1 active site.;Dbxref=GeneID:1174100;gbkey=misc_feature;gene=bglA
NC_003143.1	RefSeq	gene	1413073	1413435	.	-	.	ID=gene1213;Name=YPO1255;Dbxref=GeneID:1174101;gbkey=Gene;locus_tag=YPO1255
NC_003143.1	RefSeq	CDS	1413073	1413435	.	-	0	ID=cds1156;Name=YP_002346285.1;Parent=gene1213;Note=No significant database hits;Dbxref=UniProtKB%2FTrEMBL:Q0WHF3,Genbank:YP_002346285.1,GeneID:1174101;gbkey=CDS;product=hypothetical protein;protein_id=YP_002346285.1;transl_table=11
NC_003143.1	RefSeq	gene	1414135	1414623	.	-	.	ID=gene1214;Name=YPO1257;Dbxref=GeneID:1174102;gbkey=Gene;locus_tag=YPO1257
NC_003143.1	RefSeq	CDS	1414135	1414623	.	-	0	ID=cds1157;Name=YP_002346286.1;Parent=gene1214;Note=No significant database hits;Dbxref=UniProtKB%2FTrEMBL:Q0WHF2,Genbank:YP_002346286.1,GeneID:1174102;gbkey=CDS;product=hypothetical protein;protein_id=YP_002346286.1;transl_table=11
NC_003143.1	RefSeq	gene	1414636	1415316	.	-	.	ID=gene1215;Name=YPO1258;Dbxref=GeneID:1174103;gbkey=Gene;locus_tag=YPO1258
NC_003143.1	RefSeq	CDS	1414636	1415316	.	-	0	ID=cds1158;Name=YP_002346287.2;Parent=gene1215;Dbxref=InterPro:IPR002711,UniProtKB%2FTrEMBL:Q7CHC3,Genbank:YP_002346287.2,GeneID:1174103;gbkey=CDS;product=hypothetical protein;protein_id=YP_002346287.2;transl_table=11
NC_003143.1	RefSeq	gene	1416141	1416524	.	-	.	ID=gene1216;Name=YPO1258a;Dbxref=GeneID:1174104;gbkey=Gene;locus_tag=YPO1258a
NC_003143.1	RefSeq	CDS	1416141	1416524	.	-	0	ID=cds1159;Name=YP_008479693.1;Parent=gene1216;Dbxref=Genbank:YP_008479693.1,GeneID:1174104;gbkey=CDS;product=hypothetical protein;protein_id=YP_008479693.1;transl_table=11
NC_003143.1	RefSeq	gene	1416574	1416650	.	-	.	ID=gene1217;Name=YPt_18;Dbxref=GeneID:1174105;gbkey=Gene;locus_tag=YPt_18
NC_003143.1	RefSeq	tRNA	1416574	1416650	.	-	.	ID=rna29;Parent=gene1217;Note=tRNA Pro anticodon GGG%2C Cove score 79.79;Dbxref=GeneID:1174105;gbkey=tRNA;product=tRNA-Pro
NC_003143.1	RefSeq	exon	1416574	1416650	.	-	.	ID=id844;Parent=rna29;Note=tRNA Pro anticodon GGG%2C Cove score 79.79;Dbxref=GeneID:1174105;gbkey=tRNA;product=tRNA-Pro
NC_003143.1	RefSeq	gene	1416755	1418551	.	-	.	ID=gene1218;Name=YPO1260;Dbxref=GeneID:1174106;gbkey=Gene;locus_tag=YPO1260
NC_003143.1	RefSeq	CDS	1416755	1418551	.	-	0	ID=cds1160;Name=YP_002346289.1;Parent=gene1218;Dbxref=InterPro:IPR000917,InterPro:IPR010916,InterPro:IPR012159,UniProtKB%2FTrEMBL:Q7CHC4,Genbank:YP_002346289.1,GeneID:1174106;gbkey=CDS;product=hypothetical protein;protein_id=YP_002346289.1;transl_table=11
NC_003143.1	RefSeq	region	1418348	1418551	.	-	.	ID=id845;Note=PS00430 TonB-dependent receptor proteins signature 1.;Dbxref=GeneID:1174106;gbkey=misc_feature
NC_003143.1	RefSeq	gene	1418579	1418806	.	-	.	ID=gene1219;Name=YPO1261;Dbxref=GeneID:1174107;gbkey=Gene;locus_tag=YPO1261
NC_003143.1	RefSeq	CDS	1418579	1418806	.	-	0	ID=cds1161;Name=YP_002346290.1;Parent=gene1219;Dbxref=InterPro:IPR009857,UniProtKB%2FTrEMBL:Q0WHE8,Genbank:YP_002346290.1,GeneID:1174107;gbkey=CDS;product=hypothetical protein;protein_id=YP_002346290.1;transl_table=11
NC_003143.1	RefSeq	gene	1418984	1419988	.	+	.	ID=gene1220;Name=YPO1262;Dbxref=GeneID:1174108;gbkey=Gene;locus_tag=YPO1262
NC_003143.1	RefSeq	CDS	1418984	1419988	.	+	0	ID=cds1162;Name=YP_002346291.1;Parent=gene1220;Dbxref=InterPro:IPR007358,UniProtKB%2FTrEMBL:Q0WHE7,Genbank:YP_002346291.1,GeneID:1174108;gbkey=CDS;product=nucleoid-associated protein NdpA;protein_id=YP_002346291.1;transl_table=11
NC_003143.1	RefSeq	repeat_region	1420044	1420755	.	+	.	ID=id846;Note=Contains a %27G%27 at nucleotide position 315%7EIS200-like insertion sequence:IS1541;gbkey=repeat_region
NC_003143.1	RefSeq	gene	1420189	1420647	.	+	.	ID=gene1221;Name=tnp;Dbxref=GeneID:1174109;gbkey=Gene;gene=tnp;locus_tag=YPO1263
NC_003143.1	RefSeq	CDS	1420189	1420647	.	+	0	ID=cds1163;Name=YP_002346292.1;Parent=gene1221;Dbxref=InterPro:IPR002686,UniProtKB%2FTrEMBL:Q74YM6,Genbank:YP_002346292.1,GeneID:1174109;gbkey=CDS;gene=tnp;product=transposase for the IS1541 insertion element;protein_id=YP_002346292.1;transl_table=11
NC_003143.1	RefSeq	gene	1420786	1421070	.	-	.	ID=gene1222;Name=rplY;Dbxref=GeneID:1174110;gbkey=Gene;gene=rplY;locus_tag=YPO1264
NC_003143.1	RefSeq	CDS	1420786	1421070	.	-	0	ID=cds1164;Name=YP_002346293.1;Parent=gene1222;Note=the Ctc family of proteins consists of two types%2C one that contains the N-terminal ribosomal protein L25 domain only which in Escherichia coli binds the 5S rRNA while a subset of proteins contain a C-terminal extension that is involved in the stress response;Dbxref=InterPro:IPR001021,InterPro:IPR011035,UniProtKB%2FTrEMBL:Q0WHE5,Genbank:YP_002346293.1,GeneID:1174110;gbkey=CDS;gene=rplY;product=50S ribosomal protein L25;protein_id=YP_002346293.1;transl_table=11
NC_003143.1	RefSeq	gene	1421232	1422989	.	-	.	ID=gene1223;Name=YPO1265;Dbxref=GeneID:1174111;gbkey=Gene;locus_tag=YPO1265
NC_003143.1	RefSeq	CDS	1421232	1422989	.	-	0	ID=cds1165;Name=YP_002346294.1;Parent=gene1223;Dbxref=InterPro:IPR001650,InterPro:IPR006935,InterPro:IPR014001,InterPro:IPR014021,UniProtKB%2FTrEMBL:Q7CHC7,Genbank:YP_002346294.1,GeneID:1174111;gbkey=CDS;product=DEAD box helicase family protein;protein_id=YP_002346294.1;transl_table=11
NC_003143.1	RefSeq	gene	1423503	1424210	.	+	.	ID=gene1224;Name=rsuA;Dbxref=GeneID:1174112;gbkey=Gene;gene=rsuA;locus_tag=YPO1266
NC_003143.1	RefSeq	CDS	1423503	1424210	.	+	0	ID=cds1166;Name=YP_002346295.1;Parent=gene1224;Note=catalyzes the synthesis pseudouridine from uracil-516 in 16S ribosomal RNA;Dbxref=InterPro:IPR000748,InterPro:IPR002942,InterPro:IPR006145,UniProtKB%2FTrEMBL:Q0WHE3,Genbank:YP_002346295.1,GeneID:1174112;gbkey=CDS;gene=rsuA;product=16S rRNA pseudouridylate synthase A;protein_id=YP_002346295.1;transl_table=11
NC_003143.1	RefSeq	region	1423797	1423841	.	+	.	ID=id847;Note=PS01149 Rsu family of pseudouridine synthase signature.;Dbxref=GeneID:1174112;gbkey=misc_feature;gene=rsuA
NC_003143.1	RefSeq	gene	1424329	1425528	.	+	.	ID=gene1225;Name=bcr;Dbxref=GeneID:1174113;gbkey=Gene;gene=bcr;gene_synonym=bicA,bicR,sur,suxA;locus_tag=YPO1267
NC_003143.1	RefSeq	CDS	1424329	1425528	.	+	0	ID=cds1167;Name=YP_002346296.1;Parent=gene1225;Note=Involved in sulfonamide %28sulfathiazole%29 and bicyclomycin resistance;Dbxref=InterPro:IPR004812,InterPro:IPR007114,InterPro:IPR011701,UniProtKB%2FTrEMBL:Q7CHC8,Genbank:YP_002346296.1,GeneID:1174113;gbkey=CDS;gene=bcr;product=bicyclomycin%2Fmultidrug efflux system;protein_id=YP_002346296.1;transl_table=11
NC_003143.1	RefSeq	gene	1426495	1426839	.	+	.	ID=gene1226;Name=YPO1269;Dbxref=GeneID:1174114;gbkey=Gene;locus_tag=YPO1269
NC_003143.1	RefSeq	CDS	1426495	1426839	.	+	0	ID=cds1168;Name=YP_002346297.1;Parent=gene1226;Dbxref=UniProtKB%2FTrEMBL:Q7CHC9,Genbank:YP_002346297.1,GeneID:1174114;gbkey=CDS;product=hypothetical protein;protein_id=YP_002346297.1;transl_table=11
NC_003143.1	RefSeq	gene	1426900	1428492	.	-	.	ID=gene1227;Name=YPO1270;Dbxref=GeneID:1174115;gbkey=Gene;locus_tag=YPO1270
NC_003143.1	RefSeq	CDS	1426900	1428492	.	-	0	ID=cds1169;Name=YP_002346298.1;Parent=gene1227;Dbxref=InterPro:IPR003439,InterPro:IPR003593,InterPro:IPR013563,UniProtKB%2FTrEMBL:Q0WHE0,Genbank:YP_002346298.1,GeneID:1174115;gbkey=CDS;product=ABC transporter ATP-binding protein;protein_id=YP_002346298.1;transl_table=11
NC_003143.1	RefSeq	region	1427173	1427217	.	-	.	ID=id848;Note=PS00211 ABC transporters family signature.;Dbxref=GeneID:1174115;gbkey=misc_feature
NC_003143.1	RefSeq	region	1427512	1427535	.	-	.	ID=id849;Note=PS00017 ATP%2FGTP-binding site motif A %28P-loop%29.;Dbxref=GeneID:1174115;gbkey=misc_feature
NC_003143.1	RefSeq	region	1427977	1428021	.	-	.	ID=id850;Note=PS00211 ABC transporters family signature.;Dbxref=GeneID:1174115;gbkey=misc_feature
NC_003143.1	RefSeq	region	1428343	1428366	.	-	.	ID=id851;Note=PS00017 ATP%2FGTP-binding site motif A %28P-loop%29.;Dbxref=GeneID:1174115;gbkey=misc_feature
NC_003143.1	RefSeq	gene	1428494	1429522	.	-	.	ID=gene1228;Name=YPO1271;Dbxref=GeneID:1174116;gbkey=Gene;locus_tag=YPO1271
NC_003143.1	RefSeq	CDS	1428494	1429522	.	-	0	ID=cds1170;Name=YP_002346299.1;Parent=gene1228;Dbxref=InterPro:IPR000515,UniProtKB%2FTrEMBL:Q7CHD0,Genbank:YP_002346299.1,GeneID:1174116;gbkey=CDS;product=ABC transporter integral membrane protein;protein_id=YP_002346299.1;transl_table=11
NC_003143.1	RefSeq	region	1428755	1428841	.	-	.	ID=id852;Note=PS00402 Binding-protein-dependent transport systems inner membrane comp. sign.;Dbxref=GeneID:1174116;gbkey=misc_feature
NC_003143.1	RefSeq	gene	1429522	1430622	.	-	.	ID=gene1229;Name=YPO1272;Dbxref=GeneID:1174117;gbkey=Gene;locus_tag=YPO1272
NC_003143.1	RefSeq	CDS	1429522	1430622	.	-	0	ID=cds1171;Name=YP_002346300.1;Parent=gene1229;Dbxref=InterPro:IPR000515,UniProtKB%2FTrEMBL:Q7CHD1,Genbank:YP_002346300.1,GeneID:1174117;gbkey=CDS;product=ABC transporter integral membrane protein;protein_id=YP_002346300.1;transl_table=11
NC_003143.1	RefSeq	gene	1430632	1432440	.	-	.	ID=gene1230;Name=YPO1273;Dbxref=GeneID:1174118;gbkey=Gene;locus_tag=YPO1273
NC_003143.1	RefSeq	CDS	1430632	1432440	.	-	0	ID=cds1172;Name=YP_002346301.1;Parent=gene1230;Dbxref=InterPro:IPR000914,UniProtKB%2FTrEMBL:Q7CHD2,Genbank:YP_002346301.1,GeneID:1174118;gbkey=CDS;product=substrate-binding transport protein;protein_id=YP_002346301.1;transl_table=11
NC_003143.1	RefSeq	gene	1432522	1434103	.	-	.	ID=gene1231;Name=YPO1274;Dbxref=GeneID:1174119;gbkey=Gene;locus_tag=YPO1274;pseudo=true
NC_003143.1	RefSeq	region	1433308	1433373	.	-	.	ID=id853;Note=1 probable transmembrane helix predicted;Dbxref=GeneID:1174119;gbkey=misc_feature
NC_003143.1	RefSeq	gene	1434690	1435274	.	-	.	ID=gene1232;Name=spr;Dbxref=GeneID:1174120;gbkey=Gene;gene=spr;locus_tag=YPO1275
NC_003143.1	RefSeq	CDS	1434690	1435274	.	-	0	ID=cds1173;Name=YP_002346303.1;Parent=gene1232;Note=by similarity%2C Spr seems to have peptidase activity%3B involved in thermoresistance;Dbxref=InterPro:IPR000064,UniProtKB%2FTrEMBL:Q7CHD3,Genbank:YP_002346303.1,GeneID:1174120;gbkey=CDS;gene=spr;product=outer membrane lipoprotein;protein_id=YP_002346303.1;transl_table=11
NC_003143.1	RefSeq	region	1435194	1435226	.	-	.	ID=id854;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site.;Dbxref=GeneID:1174120;gbkey=misc_feature;gene=spr
NC_003143.1	RefSeq	gene	1435716	1436417	.	-	.	ID=gene1233;Name=YPO1276;Dbxref=GeneID:1174121;gbkey=Gene;locus_tag=YPO1276
NC_003143.1	RefSeq	CDS	1435716	1436417	.	-	0	ID=cds1174;Name=YP_002346304.1;Parent=gene1233;Dbxref=InterPro:IPR000326,InterPro:IPR008934,UniProtKB%2FTrEMBL:Q7CHD4,Genbank:YP_002346304.1,GeneID:1174121;gbkey=CDS;product=hypothetical protein;protein_id=YP_002346304.1;transl_table=11
NC_003143.1	RefSeq	gene	1436476	1437459	.	-	.	ID=gene1234;Name=YPO1277;Dbxref=GeneID:1174122;gbkey=Gene;locus_tag=YPO1277
NC_003143.1	RefSeq	CDS	1436476	1437459	.	-	0	ID=cds1175;Name=YP_002346305.1;Parent=gene1234;Dbxref=InterPro:IPR003495,InterPro:IPR011629,UniProtKB%2FTrEMBL:Q7CHD5,Genbank:YP_002346305.1,GeneID:1174122;gbkey=CDS;product=cobalamin synthesis protein;protein_id=YP_002346305.1;transl_table=11
NC_003143.1	RefSeq	region	1437412	1437435	.	-	.	ID=id855;Note=PS00017 ATP%2FGTP-binding site motif A %28P-loop%29.;Dbxref=GeneID:1174122;gbkey=misc_feature
NC_003143.1	RefSeq	gene	1437775	1438101	.	+	.	ID=gene1235;Name=YPO1278;Dbxref=GeneID:1174123;gbkey=Gene;locus_tag=YPO1278
NC_003143.1	RefSeq	CDS	1437775	1438101	.	+	0	ID=cds1176;Name=YP_002346306.1;Parent=gene1235;Dbxref=UniProtKB%2FTrEMBL:Q0WHD2,Genbank:YP_002346306.1,GeneID:1174123;gbkey=CDS;product=hypothetical protein;protein_id=YP_002346306.1;transl_table=11
NC_003143.1	RefSeq	region	1437778	1437846	.	+	.	ID=id856;Note=1 probable transmembrane helix predicted;Dbxref=GeneID:1174123;gbkey=misc_feature
NC_003143.1	RefSeq	gene	1438210	1439010	.	+	.	ID=gene1236;Name=YPO1279;Dbxref=GeneID:1174124;gbkey=Gene;locus_tag=YPO1279
NC_003143.1	RefSeq	CDS	1438210	1439010	.	+	0	ID=cds1177;Name=YP_002346307.1;Parent=gene1236;Dbxref=InterPro:IPR000524,InterPro:IPR011711,UniProtKB%2FTrEMBL:Q7CHD6,Genbank:YP_002346307.1,GeneID:1174124;gbkey=CDS;product=transcriptional regulator;protein_id=YP_002346307.1;transl_table=11
NC_003143.1	RefSeq	region	1438342	1438416	.	+	.	ID=id857;Note=PS00043 Bacterial regulatory proteins%2C gntR family signature.;Dbxref=GeneID:1174124;gbkey=misc_feature
NC_003143.1	RefSeq	gene	1439154	1440626	.	-	.	ID=gene1237;Name=YPO1280;Dbxref=GeneID:1174125;gbkey=Gene;locus_tag=YPO1280
NC_003143.1	RefSeq	CDS	1439154	1440626	.	-	0	ID=cds1178;Name=YP_002346308.1;Parent=gene1237;Dbxref=InterPro:IPR000669,InterPro:IPR008927,InterPro:IPR013118,InterPro:IPR013131,UniProtKB%2FTrEMBL:Q7CHD7,Genbank:YP_002346308.1,GeneID:1174125;gbkey=CDS;product=D-mannonate oxidoreductase;protein_id=YP_002346308.1;transl_table=11
NC_003143.1	RefSeq	region	1439937	1439975	.	-	.	ID=id858;Note=PS00974 Mannitol dehydrogenases signature.;Dbxref=GeneID:1174125;gbkey=misc_feature
NC_003143.1	RefSeq	gene	1441211	1442404	.	+	.	ID=gene1238;Name=uxuA;Dbxref=GeneID:1174126;gbkey=Gene;gene=uxuA;locus_tag=YPO1283
NC_003143.1	RefSeq	CDS	1441211	1442404	.	+	0	ID=cds1179;Name=YP_002346309.1;Parent=gene1238;Note=catalyzes the formation of 2-dehydro-3-deoxy-D-gluconate from mannonate;Dbxref=InterPro:IPR004628,UniProtKB%2FTrEMBL:Q0WHC9,Genbank:YP_002346309.1,GeneID:1174126;gbkey=CDS;gene=uxuA;product=mannonate dehydratase;protein_id=YP_002346309.1;transl_table=11
NC_003143.1	RefSeq	gene	1442544	1443116	.	-	.	ID=gene1239;Name=YPO1284;Dbxref=GeneID:1174127;gbkey=Gene;locus_tag=YPO1284
NC_003143.1	RefSeq	CDS	1442544	1443116	.	-	0	ID=cds1180;Name=YP_002346310.1;Parent=gene1239;Note=Stimulates the peptidyltransferase activity of the 70S ribosome and enhances dipeptide synthesis with N-formylmethionyl-tRNA and puromycin in vitro%2C suggesting its involvement in the formation of the first peptide bond of a protein;Dbxref=InterPro:IPR001059,InterPro:IPR008991,InterPro:IPR008994,InterPro:IPR011768,InterPro:IPR011897,InterPro:IPR012340,InterPro:IPR013185,InterPro:IPR013852,UniProtKB%2FTrEMBL:Q0WHC8,Genbank:YP_002346310.1,GeneID:1174127;gbkey=CDS;product=elongation factor P;protein_id=YP_002346310.1;transl_table=11
NC_003143.1	RefSeq	region	1442598	1442657	.	-	.	ID=id859;Note=PS01275 Elongation factor P signature.;Dbxref=GeneID:1174127;gbkey=misc_feature
NC_003143.1	RefSeq	gene	1443220	1444464	.	-	.	ID=gene1240;Name=mtr;Dbxref=GeneID:1174128;gbkey=Gene;gene=mtr;locus_tag=YPO1285
NC_003143.1	RefSeq	CDS	1443220	1444464	.	-	0	ID=cds1181;Name=YP_002346311.1;Parent=gene1240;Dbxref=InterPro:IPR002091,InterPro:IPR013059,UniProtKB%2FTrEMBL:Q7CHD8,Genbank:YP_002346311.1,GeneID:1174128;gbkey=CDS;gene=mtr;product=tryptophan-specific transport protein;protein_id=YP_002346311.1;transl_table=11
NC_003143.1	RefSeq	gene	1444839	1445093	.	+	.	ID=gene1241;Name=YPO1286;Dbxref=GeneID:1174129;gbkey=Gene;locus_tag=YPO1286
NC_003143.1	RefSeq	CDS	1444839	1445093	.	+	0	ID=cds1182;Name=YP_002346312.1;Parent=gene1241;Dbxref=InterPro:IPR005358,UniProtKB%2FTrEMBL:Q7CHD9,Genbank:YP_002346312.1,GeneID:1174129;gbkey=CDS;product=hypothetical protein;protein_id=YP_002346312.1;transl_table=11
NC_003143.1	RefSeq	gene	1445162	1445977	.	-	.	ID=gene1242;Name=YPO1287;Dbxref=GeneID:1174130;gbkey=Gene;locus_tag=YPO1287
NC_003143.1	RefSeq	CDS	1445162	1445977	.	-	0	ID=cds1183;Name=YP_002346313.1;Parent=gene1242;Dbxref=InterPro:IPR002198,InterPro:IPR002347,UniProtKB%2FTrEMBL:Q7CHE0,Genbank:YP_002346313.1,GeneID:1174130;gbkey=CDS;product=short chain oxidoreductase;protein_id=YP_002346313.1;transl_table=11
NC_003143.1	RefSeq	region	1445405	1445491	.	-	.	ID=id860;Note=PS00061 Short-chain dehydrogenases%2Freductases family signature.;Dbxref=GeneID:1174130;gbkey=misc_feature
NC_003143.1	RefSeq	gene	1445988	1446953	.	-	.	ID=gene1243;Name=YPO1288;Dbxref=GeneID:1174131;gbkey=Gene;locus_tag=YPO1288
NC_003143.1	RefSeq	CDS	1445988	1446953	.	-	0	ID=cds1184;Name=YP_002346314.1;Parent=gene1243;Dbxref=InterPro:IPR006139,InterPro:IPR006140,UniProtKB%2FTrEMBL:Q7CHE1,Genbank:YP_002346314.1,GeneID:1174131;gbkey=CDS;product=D-isomer specific 2-hydroxyacid dehydrogenase family protein;protein_id=YP_002346314.1;transl_table=11
NC_003143.1	RefSeq	region	1446222	1446272	.	-	.	ID=id861;Note=PS00671 D-isomer specific 2-hydroxyacid dehydrogenases signature 3.;Dbxref=GeneID:1174131;gbkey=misc_feature
NC_003143.1	RefSeq	region	1446291	1446359	.	-	.	ID=id862;Note=PS00670 D-isomer specific 2-hydroxyacid dehydrogenases signature 2.;Dbxref=GeneID:1174131;gbkey=misc_feature
NC_003143.1	RefSeq	gene	1446950	1448092	.	-	.	ID=gene1244;Name=YPO1289;Dbxref=GeneID:1174132;gbkey=Gene;locus_tag=YPO1289
NC_003143.1	RefSeq	CDS	1446950	1448092	.	-	0	ID=cds1185;Name=YP_002346315.1;Parent=gene1244;Dbxref=UniProtKB%2FTrEMBL:Q7CHE2,Genbank:YP_002346315.1,GeneID:1174132;gbkey=CDS;product=hypothetical protein;protein_id=YP_002346315.1;transl_table=11
NC_003143.1	RefSeq	gene	1448444	1449940	.	+	.	ID=gene1245;Name=YPO1290;Dbxref=GeneID:1174133;gbkey=Gene;locus_tag=YPO1290
NC_003143.1	RefSeq	CDS	1448444	1449940	.	+	0	ID=cds1186;Name=YP_002346316.1;Parent=gene1245;Dbxref=InterPro:IPR002086,InterPro:IPR012303,UniProtKB%2FTrEMBL:Q7CHE3,Genbank:YP_002346316.1,GeneID:1174133;gbkey=CDS;product=aldehyde dehydrogenase;protein_id=YP_002346316.1;transl_table=11
NC_003143.1	RefSeq	region	1449308	1449343	.	+	.	ID=id863;Note=PS00070 Aldehyde dehydrogenases cysteine active site.;Dbxref=GeneID:1174133;gbkey=misc_feature
NC_003143.1	RefSeq	gene	1449944	1451497	.	+	.	ID=gene1246;Name=YPO1291;Dbxref=GeneID:1174134;gbkey=Gene;locus_tag=YPO1291
NC_003143.1	RefSeq	CDS	1449944	1451497	.	+	0	ID=cds1187;Name=YP_002346317.1;Parent=gene1246;Dbxref=InterPro:IPR000577,InterPro:IPR006000,UniProtKB%2FTrEMBL:Q7CHE4,Genbank:YP_002346317.1,GeneID:1174134;gbkey=CDS;product=carbohydrate kinase;protein_id=YP_002346317.1;transl_table=11
NC_003143.1	RefSeq	region	1450334	1450372	.	+	.	ID=id864;Note=PS00933 FGGY family of carbohydrate kinases signature 1.;Dbxref=GeneID:1174134;gbkey=misc_feature
NC_003143.1	RefSeq	region	1451057	1451119	.	+	.	ID=id865;Note=PS00445 FGGY family of carbohydrate kinases signature 2.;Dbxref=GeneID:1174134;gbkey=misc_feature
NC_003143.1	RefSeq	gene	1451517	1452227	.	+	.	ID=gene1247;Name=rpiA;Dbxref=GeneID:1174135;gbkey=Gene;gene=rpiA;locus_tag=YPO1292
NC_003143.1	RefSeq	CDS	1451517	1452227	.	+	0	ID=cds1188;Name=YP_002346318.1;Parent=gene1247;Dbxref=InterPro:IPR004788,UniProtKB%2FTrEMBL:Q0WHC0,Genbank:YP_002346318.1,GeneID:1174135;gbkey=CDS;gene=rpiA;product=ribose 5-phosphate isomerase;protein_id=YP_002346318.1;transl_table=11
NC_003143.1	RefSeq	gene	1452359	1453447	.	+	.	ID=gene1248;Name=YPO1293;Dbxref=GeneID:1174136;gbkey=Gene;locus_tag=YPO1293
NC_003143.1	RefSeq	CDS	1452359	1453447	.	+	0	ID=cds1189;Name=YP_002346319.1;Parent=gene1248;Dbxref=InterPro:IPR006311,UniProtKB%2FTrEMBL:Q7CHE5,Genbank:YP_002346319.1,GeneID:1174136;gbkey=CDS;product=periplasmic carbohydrate-binding transport protein;protein_id=YP_002346319.1;transl_table=11
NC_003143.1	RefSeq	region	1452395	1452454	.	+	.	ID=id866;Note=1 probable transmembrane helix predicted;Dbxref=GeneID:1174136;gbkey=misc_feature
NC_003143.1	RefSeq	gene	1453556	1455130	.	+	.	ID=gene1249;Name=YPO1294;Dbxref=GeneID:1174137;gbkey=Gene;locus_tag=YPO1294
NC_003143.1	RefSeq	CDS	1453556	1455130	.	+	0	ID=cds1190;Name=YP_002346320.1;Parent=gene1249;Dbxref=InterPro:IPR003439,InterPro:IPR003593,UniProtKB%2FTrEMBL:Q7CHE6,Genbank:YP_002346320.1,GeneID:1174137;gbkey=CDS;product=ABC transporter ATP-binding protein;protein_id=YP_002346320.1;transl_table=11
NC_003143.1	RefSeq	region	1453760	1453783	.	+	.	ID=id867;Note=PS00017 ATP%2FGTP-binding site motif A %28P-loop%29.;Dbxref=GeneID:1174137;gbkey=misc_feature
NC_003143.1	RefSeq	region	1454834	1454878	.	+	.	ID=id868;Note=PS00211 ABC transporters family signature.;Dbxref=GeneID:1174137;gbkey=misc_feature
NC_003143.1	RefSeq	gene	1455166	1456164	.	+	.	ID=gene1250;Name=YPO1295;Dbxref=GeneID:1174138;gbkey=Gene;locus_tag=YPO1295
NC_003143.1	RefSeq	CDS	1455166	1456164	.	+	0	ID=cds1191;Name=YP_002346321.1;Parent=gene1250;Dbxref=InterPro:IPR001851,UniProtKB%2FTrEMBL:Q7CHE7,Genbank:YP_002346321.1,GeneID:1174138;gbkey=CDS;product=ABC transporter integral membrane protein;protein_id=YP_002346321.1;transl_table=11
NC_003143.1	RefSeq	gene	1456277	1456798	.	-	.	ID=gene1251;Name=YPO1296;Dbxref=GeneID:1174139;gbkey=Gene;locus_tag=YPO1296
NC_003143.1	RefSeq	CDS	1456277	1456798	.	-	0	ID=cds1192;Name=YP_002346322.1;Parent=gene1251;Dbxref=InterPro:IPR000086,UniProtKB%2FTrEMBL:Q0WHB6,Genbank:YP_002346322.1,GeneID:1174139;gbkey=CDS;product=Mut family protein;protein_id=YP_002346322.1;transl_table=11
NC_003143.1	RefSeq	region	1456568	1456627	.	-	.	ID=id869;Note=PS00893 mutT domain signature.;Dbxref=GeneID:1174139;gbkey=misc_feature
NC_003143.1	RefSeq	gene	1456994	1458127	.	+	.	ID=gene1252;Name=fruB;Dbxref=GeneID:1174140;gbkey=Gene;gene=fruB;gene_synonym=fruF;locus_tag=YPO1298
NC_003143.1	RefSeq	CDS	1456994	1458127	.	+	0	ID=cds1193;Name=YP_002346323.1;Parent=gene1252;Note=phosphoenolpyruvate %28PEP%29-dependent%2C sugar transporting phosphotransferase system%3B catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane%3B IIA is phosphorylated by phospho-HP which then transfers the phosphoryl group to the IIB componentr;Dbxref=InterPro:IPR000032,InterPro:IPR001020,InterPro:IPR002114,InterPro:IPR002178,InterPro:IPR005698,UniProtKB%2FTrEMBL:Q7CHE8,Genbank:YP_002346323.1,GeneID:1174140;gbkey=CDS;gene=fruB;product=bifunctional PTS system fructose-specific transporter subunit IIA%2FHPr protein;protein_id=YP_002346323.1;transl_table=11
NC_003143.1	RefSeq	region	1457132	1457182	.	+	.	ID=id870;Note=PS00372 PTS EIIA domains phosphorylation site signature 2.;Dbxref=GeneID:1174140;gbkey=misc_feature;gene=fruB
NC_003143.1	RefSeq	region	1457882	1457905	.	+	.	ID=id871;Note=PS00369 PTS HPR component histidine phosphorylation site signature.;Dbxref=GeneID:1174140;gbkey=misc_feature;gene=fruB
NC_003143.1	RefSeq	region	1457969	1458016	.	+	.	ID=id872;Note=PS00589 PTS HPR component serine phosphorylation site signature.;Dbxref=GeneID:1174140;gbkey=misc_feature;gene=fruB
NC_003143.1	RefSeq	gene	1458124	1459062	.	+	.	ID=gene1253;Name=fruK;Dbxref=GeneID:1174141;gbkey=Gene;gene=fruK;locus_tag=YPO1299
NC_003143.1	RefSeq	CDS	1458124	1459062	.	+	0	ID=cds1194;Name=YP_002346324.1;Parent=gene1253;Note=converts fructose-1-phosphate and ATP to fructose-1%2C6-bisphosphate and ADP%3B highly specific for fructose-1-phopshate%3B similar to PfkB%3B forms homodimers;Dbxref=InterPro:IPR002173,InterPro:IPR011611,UniProtKB%2FTrEMBL:Q7CHE9,Genbank:YP_002346324.1,GeneID:1174141;gbkey=CDS;gene=fruK;product=1-phosphofructokinase;protein_id=YP_002346324.1;transl_table=11
NC_003143.1	RefSeq	region	1458238	1458312	.	+	.	ID=id873;Note=PS00583 pfkB family of carbohydrate kinases signature 1.;Dbxref=GeneID:1174141;gbkey=misc_feature;gene=fruK
NC_003143.1	RefSeq	region	1458868	1458909	.	+	.	ID=id874;Note=PS00584 pfkB family of carbohydrate kinases signature 2.;Dbxref=GeneID:1174141;gbkey=misc_feature;gene=fruK
NC_003143.1	RefSeq	gene	1459077	1460777	.	+	.	ID=gene1254;Name=fruA;Dbxref=GeneID:1174142;gbkey=Gene;gene=fruA;gene_synonym=ptsF;locus_tag=YPO1300
NC_003143.1	RefSeq	CDS	1459077	1460777	.	+	0	ID=cds1195;Name=YP_002346325.1;Parent=gene1254;Note=phosphoenolpyruvate-dependent sugar phosphotransferase system%3B catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane%3B IIB is phosphorylated by IIA and then transfers the phosphoryl group to the sugar%3B IIC forms the translocation channel;Dbxref=InterPro:IPR003352,InterPro:IPR003353,InterPro:IPR006327,InterPro:IPR013011,InterPro:IPR013014,UniProtKB%2FTrEMBL:Q7CHF0,Genbank:YP_002346325.1,GeneID:1174142;gbkey=CDS;gene=fruA;product=PTS system fructose-specific transporter subunits IIBC;protein_id=YP_002346325.1;transl_table=11
NC_003143.1	RefSeq	gene	1461102	1461746	.	+	.	ID=gene1255;Name=psaE;Dbxref=GeneID:1174143;gbkey=Gene;gene=psaE;locus_tag=YPO1301
NC_003143.1	RefSeq	CDS	1461102	1461746	.	+	0	ID=cds1196;Name=YP_002346326.1;Parent=gene1255;Dbxref=InterPro:IPR001867,InterPro:IPR011991,UniProtKB%2FTrEMBL:Q0WHB2,Genbank:YP_002346326.1,GeneID:1174143;gbkey=CDS;gene=psaE;product=regulatory protein;protein_id=YP_002346326.1;transl_table=11
NC_003143.1	RefSeq	region	1461498	1461566	.	+	.	ID=id875;Note=1 probable transmembrane helix predicted;Dbxref=GeneID:1174143;gbkey=misc_feature;gene=psaE
NC_003143.1	RefSeq	gene	1461743	1462231	.	+	.	ID=gene1256;Name=psaF;Dbxref=GeneID:1174144;gbkey=Gene;gene=psaF;locus_tag=YPO1302
NC_003143.1	RefSeq	CDS	1461743	1462231	.	+	0	ID=cds1197;Name=YP_002346327.1;Parent=gene1256;Dbxref=UniProtKB%2FTrEMBL:Q0WHB1,Genbank:YP_002346327.1,GeneID:1174144;gbkey=CDS;gene=psaF;product=hypothetical protein;protein_id=YP_002346327.1;transl_table=11
NC_003143.1	RefSeq	region	1461761	1461829	.	+	.	ID=id876;Note=1 probable transmembrane helix predicted;Dbxref=GeneID:1174144;gbkey=misc_feature;gene=psaF
NC_003143.1	RefSeq	gene	1462776	1463252	.	+	.	ID=gene1257;Name=psaA;Dbxref=GeneID:1174145;gbkey=Gene;gene=psaA;locus_tag=YPO1303
NC_003143.1	RefSeq	CDS	1462776	1463252	.	+	0	ID=cds1198;Name=YP_002346328.1;Parent=gene1257;Dbxref=UniProtKB%2FTrEMBL:Q0WHB0,Genbank:YP_002346328.1,GeneID:1174145;gbkey=CDS;gene=psaA;product=pH 6 antigen %28antigen 4%29 %28adhesin%29;protein_id=YP_002346328.1;transl_table=11
NC_003143.1	RefSeq	region	1462806	1462838	.	+	.	ID=id877;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site.;Dbxref=GeneID:1174145;gbkey=misc_feature;gene=psaA
NC_003143.1	RefSeq	gene	1463379	1464200	.	+	.	ID=gene1258;Name=psaB;Dbxref=GeneID:1174146;gbkey=Gene;gene=psaB;locus_tag=YPO1304
NC_003143.1	RefSeq	CDS	1463379	1464200	.	+	0	ID=cds1199;Name=YP_002346329.1;Parent=gene1258;Dbxref=InterPro:IPR001829,InterPro:IPR008962,UniProtKB%2FTrEMBL:Q0WHA9,Genbank:YP_002346329.1,GeneID:1174146;gbkey=CDS;gene=psaB;product=chaperone protein PsaB;protein_id=YP_002346329.1;transl_table=11
NC_003143.1	RefSeq	region	1463412	1463471	.	+	.	ID=id878;Note=1 probable transmembrane helix predicted;Dbxref=GeneID:1174146;gbkey=misc_feature;gene=psaB
NC_003143.1	RefSeq	region	1463727	1463780	.	+	.	ID=id879;Note=PS00635 Gram-negative pili assembly chaperone signature.;Dbxref=GeneID:1174146;gbkey=misc_feature;gene=psaB
NC_003143.1	RefSeq	gene	1464242	1466755	.	+	.	ID=gene1259;Name=psaC;Dbxref=GeneID:1174147;gbkey=Gene;gene=psaC;locus_tag=YPO1305
NC_003143.1	RefSeq	CDS	1464242	1466755	.	+	0	ID=cds1200;Name=YP_002346330.1;Parent=gene1259;Dbxref=InterPro:IPR000015,UniProtKB%2FTrEMBL:Q0WHA8,Genbank:YP_002346330.1,GeneID:1174147;gbkey=CDS;gene=psaC;product=outer membrane usher protein PsaC;protein_id=YP_002346330.1;transl_table=11
NC_003143.1	RefSeq	region	1465145	1465177	.	+	.	ID=id880;Note=PS01151 Fimbrial biogenesis outer membrane usher protein signature.;Dbxref=GeneID:1174147;gbkey=misc_feature;gene=psaC
NC_003143.1	RefSeq	gene	1466842	1467699	.	-	.	ID=gene1260;Name=nfo;Dbxref=GeneID:1174148;gbkey=Gene;gene=nfo;locus_tag=YPO1306
NC_003143.1	RefSeq	CDS	1466842	1467699	.	-	0	ID=cds1201;Name=YP_002346331.1;Parent=gene1260;Note=Assists in DNA repair by cleaving phosphodiester bonds at apurinic or apyrimidinic sties to produce new 5%27 ends that are base-free deoxyribose 5-phosphate residues;Dbxref=InterPro:IPR001719,InterPro:IPR012307,UniProtKB%2FTrEMBL:Q0WHA7,Genbank:YP_002346331.1,GeneID:1174148;gbkey=CDS;gene=nfo;product=endonuclease IV;protein_id=YP_002346331.1;transl_table=11
NC_003143.1	RefSeq	region	1466974	1466997	.	-	.	ID=id881;Note=PS00017 ATP%2FGTP-binding site motif A %28P-loop%29.;Dbxref=GeneID:1174148;gbkey=misc_feature;gene=nfo
NC_003143.1	RefSeq	region	1467154	1467177	.	-	.	ID=id882;Note=PS00730 AP endonucleases family 2 signature 2.;Dbxref=GeneID:1174148;gbkey=misc_feature;gene=nfo
NC_003143.1	RefSeq	region	1467469	1467495	.	-	.	ID=id883;Note=PS00729 AP endonucleases family 2 signature 1.;Dbxref=GeneID:1174148;gbkey=misc_feature;gene=nfo
NC_003143.1	RefSeq	gene	1467863	1468951	.	-	.	ID=gene1261;Name=YPO1307;Dbxref=GeneID:1174149;gbkey=Gene;locus_tag=YPO1307
NC_003143.1	RefSeq	CDS	1467863	1468951	.	-	0	ID=cds1202;Name=YP_002346332.1;Parent=gene1261;Dbxref=InterPro:IPR004630,UniProtKB%2FTrEMBL:Q0WHA6,Genbank:YP_002346332.1,GeneID:1174149;gbkey=CDS;product=hypothetical protein;protein_id=YP_002346332.1;transl_table=11
NC_003143.1	RefSeq	gene	1469609	1470481	.	+	.	ID=gene1262;Name=YPO1308;Dbxref=GeneID:1174150;gbkey=Gene;locus_tag=YPO1308
NC_003143.1	RefSeq	CDS	1469609	1470481	.	+	0	ID=cds1203;Name=YP_002346333.1;Parent=gene1262;Dbxref=InterPro:IPR000847,InterPro:IPR005119,InterPro:IPR011991,UniProtKB%2FTrEMBL:Q7CHF1,Genbank:YP_002346333.1,GeneID:1174150;gbkey=CDS;product=DNA-binding transcriptional regulator;protein_id=YP_002346333.1;transl_table=11
NC_003143.1	RefSeq	region	1469663	1469755	.	+	.	ID=id884;Note=PS00044 Bacterial regulatory proteins%2C lysR family signature.;Dbxref=GeneID:1174150;gbkey=misc_feature
NC_003143.1	RefSeq	gene	1470739	1472250	.	+	.	ID=gene1263;Name=lysP;Dbxref=GeneID:1174151;gbkey=Gene;gene=lysP;locus_tag=YPO1309
NC_003143.1	RefSeq	CDS	1470739	1472250	.	+	0	ID=cds1204;Name=YP_002346334.1;Parent=gene1263;Dbxref=InterPro:IPR002293,InterPro:IPR004840,InterPro:IPR004841,UniProtKB%2FTrEMBL:Q7CHF2,Genbank:YP_002346334.1,GeneID:1174151;gbkey=CDS;gene=lysP;product=lysine transporter;protein_id=YP_002346334.1;transl_table=11
NC_003143.1	RefSeq	region	1470886	1470981	.	+	.	ID=id885;Note=PS00218 Amino acid permeases signature.;Dbxref=GeneID:1174151;gbkey=misc_feature;gene=lysP
NC_003143.1	RefSeq	gene	1472536	1473681	.	+	.	ID=gene1264;Name=YPO1310;Dbxref=GeneID:1174152;gbkey=Gene;locus_tag=YPO1310
NC_003143.1	RefSeq	CDS	1472536	1473681	.	+	0	ID=cds1205;Name=YP_002346335.1;Parent=gene1264;Dbxref=InterPro:IPR002491,UniProtKB%2FTrEMBL:Q0WHA3,Genbank:YP_002346335.1,GeneID:1174152;gbkey=CDS;product=substrate-binding protein;protein_id=YP_002346335.1;transl_table=11
NC_003143.1	RefSeq	region	1472569	1472637	.	+	.	ID=id886;Note=1 probable transmembrane helix predicted;Dbxref=GeneID:1174152;gbkey=misc_feature
NC_003143.1	RefSeq	gene	1473876	1474958	.	+	.	ID=gene1265;Name=YPO1311;Dbxref=GeneID:1174153;gbkey=Gene;locus_tag=YPO1311
NC_003143.1	RefSeq	CDS	1473876	1474958	.	+	0	ID=cds1206;Name=YP_002346336.1;Parent=gene1265;Dbxref=InterPro:IPR000522,UniProtKB%2FTrEMBL:Q7CHF3,Genbank:YP_002346336.1,GeneID:1174153;gbkey=CDS;product=FecCD family membrane transport protein;protein_id=YP_002346336.1;transl_table=11
NC_003143.1	RefSeq	gene	1474955	1475743	.	+	.	ID=gene1266;Name=YPO1312;Dbxref=GeneID:1174154;gbkey=Gene;locus_tag=YPO1312
NC_003143.1	RefSeq	CDS	1474955	1475743	.	+	0	ID=cds1207;Name=YP_002346337.1;Parent=gene1266;Dbxref=InterPro:IPR003439,InterPro:IPR003593,UniProtKB%2FTrEMBL:Q7CHF4,Genbank:YP_002346337.1,GeneID:1174154;gbkey=CDS;product=siderophore ABC transporter ATP-binding protein;protein_id=YP_002346337.1;transl_table=11
NC_003143.1	RefSeq	region	1475066	1475089	.	+	.	ID=id887;Note=PS00017 ATP%2FGTP-binding site motif A %28P-loop%29.;Dbxref=GeneID:1174154;gbkey=misc_feature
NC_003143.1	RefSeq	region	1475366	1475410	.	+	.	ID=id888;Note=PS00211 ABC transporters family signature.;Dbxref=GeneID:1174154;gbkey=misc_feature
NC_003143.1	RefSeq	gene	1476003	1478000	.	+	.	ID=gene1267;Name=YPO1313;Dbxref=GeneID:1174155;gbkey=Gene;locus_tag=YPO1313
NC_003143.1	RefSeq	CDS	1476003	1478000	.	+	0	ID=cds1208;Name=YP_002346338.1;Parent=gene1267;Note=YiuR%3B outer membrane siderophore receptor;Dbxref=InterPro:IPR000531,InterPro:IPR010916,InterPro:IPR012910,UniProtKB%2FTrEMBL:Q7CHF5,Genbank:YP_002346338.1,GeneID:1174155;gbkey=CDS;product=outer membrane receptor;protein_id=YP_002346338.1;transl_table=11
NC_003143.1	RefSeq	region	1476003	1476140	.	+	.	ID=id889;Note=PS00430 TonB-dependent receptor proteins signature 1.;Dbxref=GeneID:1174155;gbkey=misc_feature
NC_003143.1	RefSeq	gene	1478270	1478890	.	-	.	ID=gene1268;Name=YPO1314;Dbxref=GeneID:1174156;gbkey=Gene;locus_tag=YPO1314
NC_003143.1	RefSeq	CDS	1478270	1478890	.	-	0	ID=cds1209;Name=YP_002346339.1;Parent=gene1268;Dbxref=InterPro:IPR004045,InterPro:IPR004046,InterPro:IPR010987,InterPro:IPR012335,InterPro:IPR012336,UniProtKB%2FTrEMBL:Q0WH99,Genbank:YP_002346339.1,GeneID:1174156;gbkey=CDS;product=glutathione S-transferase family protein;protein_id=YP_002346339.1;transl_table=11
NC_003143.1	RefSeq	gene	1479044	1479694	.	-	.	ID=gene1269;Name=YPO1315;Dbxref=GeneID:1174157;gbkey=Gene;locus_tag=YPO1315
NC_003143.1	RefSeq	CDS	1479044	1479694	.	-	0	ID=cds1210;Name=YP_002346340.1;Parent=gene1269;Dbxref=InterPro:IPR006383,InterPro:IPR006385,UniProtKB%2FTrEMBL:Q7CHF6,Genbank:YP_002346340.1,GeneID:1174157;gbkey=CDS;product=hydrolase;protein_id=YP_002346340.1;transl_table=11
NC_003143.1	RefSeq	gene	1480181	1481248	.	+	.	ID=gene1270;Name=YPO1316;Dbxref=GeneID:1174158;gbkey=Gene;locus_tag=YPO1316
NC_003143.1	RefSeq	CDS	1480181	1481248	.	+	0	ID=cds1211;Name=YP_002346341.1;Parent=gene1270;Dbxref=InterPro:IPR002283,InterPro:IPR005123,UniProtKB%2FTrEMBL:Q74VM2,Genbank:YP_002346341.1,GeneID:1174158;gbkey=CDS;product=iron%2Fascorbate oxidoreductase family protein;protein_id=YP_002346341.1;transl_table=11
NC_003143.1	RefSeq	gene	1481476	1482300	.	+	.	ID=gene1271;Name=YPO1317;Dbxref=GeneID:1174159;gbkey=Gene;locus_tag=YPO1317
NC_003143.1	RefSeq	CDS	1481476	1482300	.	+	0	ID=cds1212;Name=YP_002346342.1;Parent=gene1271;Dbxref=InterPro:IPR004872,UniProtKB%2FTrEMBL:Q7CHF7,Genbank:YP_002346342.1,GeneID:1174159;gbkey=CDS;product=hypothetical protein;protein_id=YP_002346342.1;transl_table=11
NC_003143.1	RefSeq	gene	1482297	1483283	.	+	.	ID=gene1272;Name=YPO1318;Dbxref=GeneID:1174160;gbkey=Gene;locus_tag=YPO1318
NC_003143.1	RefSeq	CDS	1482297	1483283	.	+	0	ID=cds1213;Name=YP_002346343.1;Parent=gene1272;Dbxref=InterPro:IPR003439,InterPro:IPR003593,UniProtKB%2FTrEMBL:Q7CHF8,Genbank:YP_002346343.1,GeneID:1174160;gbkey=CDS;product=ABC transporter ATP-binding protein;protein_id=YP_002346343.1;transl_table=11
NC_003143.1	RefSeq	region	1482408	1482431	.	+	.	ID=id890;Note=PS00017 ATP%2FGTP-binding site motif A %28P-loop%29.;Dbxref=GeneID:1174160;gbkey=misc_feature
NC_003143.1	RefSeq	region	1482717	1482761	.	+	.	ID=id891;Note=PS00211 ABC transporters family signature.;Dbxref=GeneID:1174160;gbkey=misc_feature
NC_003143.1	RefSeq	gene	1483280	1483951	.	+	.	ID=gene1273;Name=YPO1319;Dbxref=GeneID:1174161;gbkey=Gene;locus_tag=YPO1319
NC_003143.1	RefSeq	CDS	1483280	1483951	.	+	0	ID=cds1214;Name=YP_002346344.1;Parent=gene1273;Dbxref=InterPro:IPR000515,UniProtKB%2FTrEMBL:Q7CHF9,Genbank:YP_002346344.1,GeneID:1174161;gbkey=CDS;product=ABC transporter integral membrane protein;protein_id=YP_002346344.1;transl_table=11
NC_003143.1	RefSeq	gene	1484193	1485491	.	+	.	ID=gene1274;Name=dacC;Dbxref=GeneID:1174162;gbkey=Gene;gene=dacC;locus_tag=YPO1320
NC_003143.1	RefSeq	CDS	1484193	1485491	.	+	0	ID=cds1215;Name=YP_002346345.1;Parent=gene1274;Dbxref=InterPro:IPR001967,InterPro:IPR012338,InterPro:IPR012907,UniProtKB%2FTrEMBL:Q7CHG0,Genbank:YP_002346345.1,GeneID:1174162;gbkey=CDS;gene=dacC;product=D-alanyl-D-alanine carboxypeptidase;protein_id=YP_002346345.1;transl_table=11
NC_003143.1	RefSeq	gene	1485931	1487232	.	-	.	ID=gene1275;Name=dcrA;Dbxref=GeneID:1174163;gbkey=Gene;gene=dcrA;gene_synonym=dcrA,sdaC;locus_tag=YPO1321
NC_003143.1	RefSeq	CDS	1485931	1487232	.	-	0	ID=cds1216;Name=YP_002346346.1;Parent=gene1275;Dbxref=InterPro:IPR004694,InterPro:IPR013057,UniProtKB%2FTrEMBL:Q0WH92,Genbank:YP_002346346.1,GeneID:1174163;gbkey=CDS;gene=dcrA;product=serine transporter;protein_id=YP_002346346.1;transl_table=11
NC_003143.1	RefSeq	gene	1488332	1489096	.	-	.	ID=gene1276;Name=deoR;Dbxref=GeneID:1174164;gbkey=Gene;gene=deoR;gene_synonym=nucR;locus_tag=YPO1322
NC_003143.1	RefSeq	CDS	1488332	1489096	.	-	0	ID=cds1217;Name=YP_002346347.1;Parent=gene1276;Dbxref=InterPro:IPR001034,UniProtKB%2FTrEMBL:Q7CHG1,Genbank:YP_002346347.1,GeneID:1174164;gbkey=CDS;gene=deoR;product=DNA-binding transcriptional repressor DeoR;protein_id=YP_002346347.1;transl_table=11
NC_003143.1	RefSeq	region	1488968	1489033	.	-	.	ID=id892;Note=Predicted helix-turn-helix motif with score 1500 %28%2B4.30 SD%29 at aa 22-43%2C sequence IHLKDAANLLRVSEMTIRRDLS;Dbxref=GeneID:1174164;gbkey=misc_feature;gene=deoR
NC_003143.1	RefSeq	region	1488971	1489075	.	-	.	ID=id893;Note=PS00894 Bacterial regulatory proteins%2C deoR family signature.;Dbxref=GeneID:1174164;gbkey=misc_feature;gene=deoR
NC_003143.1	RefSeq	gene	1489326	1489997	.	-	.	ID=gene1277;Name=deoC;Dbxref=GeneID:1174165;gbkey=Gene;gene=deoC;gene_synonym=dra;locus_tag=YPO1323
NC_003143.1	RefSeq	CDS	1489326	1489997	.	-	0	ID=cds1218;Name=YP_002346348.1;Parent=gene1277;Note=catalyzes the formation of D-glyceraldehyde 3-phosphate and acetaldehyde from 2-deoxy-D-ribose-5-phosphate;Dbxref=InterPro:IPR002915,InterPro:IPR011343,UniProtKB%2FTrEMBL:Q0WH90,Genbank:YP_002346348.1,GeneID:1174165;gbkey=CDS;gene=deoC;product=deoxyribose-phosphate aldolase;protein_id=YP_002346348.1;transl_table=11
NC_003143.1	RefSeq	gene	1490255	1490851	.	-	.	ID=gene1278;Name=YPO1324;Dbxref=GeneID:1174166;gbkey=Gene;locus_tag=YPO1324
NC_003143.1	RefSeq	CDS	1490255	1490851	.	-	0	ID=cds1219;Name=YP_002346349.1;Parent=gene1278;Dbxref=InterPro:IPR000326,InterPro:IPR008934,UniProtKB%2FTrEMBL:Q0WH89,Genbank:YP_002346349.1,GeneID:1174166;gbkey=CDS;product=undecaprenyl pyrophosphate phosphatase;protein_id=YP_002346349.1;transl_table=11
NC_003143.1	RefSeq	gene	1490860	1491675	.	-	.	ID=gene1279;Name=YPO1325;Dbxref=GeneID:1174167;gbkey=Gene;locus_tag=YPO1325
NC_003143.1	RefSeq	CDS	1490860	1491675	.	-	0	ID=cds1220;Name=YP_002346350.1;Parent=gene1279;Dbxref=InterPro:IPR008934,UniProtKB%2FTrEMBL:Q7CHG2,Genbank:YP_002346350.1,GeneID:1174167;gbkey=CDS;product=hypothetical protein;protein_id=YP_002346350.1;transl_table=11
NC_003143.1	RefSeq	gene	1492008	1493696	.	-	.	ID=gene1280;Name=YPO1326;Dbxref=GeneID:1174168;gbkey=Gene;locus_tag=YPO1326
NC_003143.1	RefSeq	CDS	1492008	1493696	.	-	0	ID=cds1221;Name=YP_002346351.1;Parent=gene1280;Dbxref=InterPro:IPR006037,InterPro:IPR006512,UniProtKB%2FTrEMBL:Q0WH87,Genbank:YP_002346351.1,GeneID:1174168;gbkey=CDS;product=hypothetical protein;protein_id=YP_002346351.1;transl_table=11
NC_003143.1	RefSeq	gene	1494106	1494369	.	-	.	ID=gene1281;Name=grxA;Dbxref=GeneID:1174169;gbkey=Gene;gene=grxA;locus_tag=YPO1327
NC_003143.1	RefSeq	CDS	1494106	1494369	.	-	0	ID=cds1222;Name=YP_002346352.1;Parent=gene1281;Note=functions as an electron carrier in the glutathione-dependent synthesis of deoxyribonucleotides by the enzyme ribonucleotide reductase%3B also involved in reducing some disulfides in a coupled system with glutathione reductase;Dbxref=InterPro:IPR002109,InterPro:IPR011767,InterPro:IPR011902,InterPro:IPR012335,InterPro:IPR012336,UniProtKB%2FTrEMBL:Q7CHG3,Genbank:YP_002346352.1,GeneID:1174169;gbkey=CDS;gene=grxA;product=glutaredoxin;protein_id=YP_002346352.1;transl_table=11
NC_003143.1	RefSeq	region	1494310	1494357	.	-	.	ID=id894;Note=PS00195 Glutaredoxin active site.;Dbxref=GeneID:1174169;gbkey=misc_feature;gene=grxA
NC_003143.1	RefSeq	ribosome_entry_site	1494376	1494381	.	-	.	ID=id895;gbkey=RBS
NC_003143.1	RefSeq	gene	1494832	1495146	.	+	.	ID=gene1282;Name=YPO1328;Dbxref=GeneID:1174170;gbkey=Gene;locus_tag=YPO1328
NC_003143.1	RefSeq	CDS	1494832	1495146	.	+	0	ID=cds1223;Name=YP_002346353.1;Parent=gene1282;Note=YbjC%3B located in the same operon as the nfsA gene%3B member of the soxRS regulon which mediates in part the increased levels of superoxide in response to oxidative stress%3B induced by paraquat%3B regulated by SoxS%3B unknown function;Dbxref=InterPro:IPR010815,UniProtKB%2FTrEMBL:Q7CHG4,Genbank:YP_002346353.1,GeneID:1174170;gbkey=CDS;product=hypothetical protein;protein_id=YP_002346353.1;transl_table=11
NC_003143.1	RefSeq	gene	1495162	1495281	.	+	.	ID=gene1283;Name=YPO1329;Dbxref=GeneID:1174171;gbkey=Gene;locus_tag=YPO1329
NC_003143.1	RefSeq	CDS	1495162	1495281	.	+	0	ID=cds1224;Name=YP_002346354.1;Parent=gene1283;Note=No significant database hits;Dbxref=UniProtKB%2FTrEMBL:Q0WH84,Genbank:YP_002346354.1,GeneID:1174171;gbkey=CDS;product=hypothetical protein;protein_id=YP_002346354.1;transl_table=11
NC_003143.1	RefSeq	gene	1495288	1495773	.	+	.	ID=gene1284;Name=YPO1330;Dbxref=GeneID:1174172;gbkey=Gene;locus_tag=YPO1330
NC_003143.1	RefSeq	CDS	1495288	1495773	.	+	0	ID=cds1225;Name=YP_002346355.1;Parent=gene1284;Dbxref=UniProtKB%2FTrEMBL:Q7CHG5,Genbank:YP_002346355.1,GeneID:1174172;gbkey=CDS;product=hypothetical protein;protein_id=YP_002346355.1;transl_table=11
NC_003143.1	RefSeq	ribosome_entry_site	1496277	1496281	.	+	.	ID=id896;gbkey=RBS
NC_003143.1	RefSeq	gene	1496291	1497400	.	+	.	ID=gene1285;Name=potF;Dbxref=GeneID:1174173;gbkey=Gene;gene=potF;locus_tag=YPO1331
NC_003143.1	RefSeq	CDS	1496291	1497400	.	+	0	ID=cds1226;Name=YP_002346356.1;Parent=gene1285;Dbxref=InterPro:IPR001188,InterPro:IPR006059,UniProtKB%2FTrEMBL:Q0WH82,Genbank:YP_002346356.1,GeneID:1174173;gbkey=CDS;gene=potF;product=putrescine ABC transporter substrate-binding protein;protein_id=YP_002346356.1;transl_table=11
NC_003143.1	RefSeq	gene	1497571	1498704	.	+	.	ID=gene1286;Name=potG;Dbxref=GeneID:1174174;gbkey=Gene;gene=potG;locus_tag=YPO1332
NC_003143.1	RefSeq	CDS	1497571	1498704	.	+	0	ID=cds1227;Name=YP_002346357.1;Parent=gene1286;Note=part of the PotFGHI ATP-dependent putrescine transporter;Dbxref=InterPro:IPR003439,InterPro:IPR003593,InterPro:IPR005893,InterPro:IPR008995,InterPro:IPR013611,UniProtKB%2FTrEMBL:Q7CHG6,Genbank:YP_002346357.1,GeneID:1174174;gbkey=CDS;gene=potG;product=putrescine ABC transporter ATP-binding protein;protein_id=YP_002346357.1;transl_table=11
NC_003143.1	RefSeq	region	1497724	1497747	.	+	.	ID=id897;Note=PS00017 ATP%2FGTP-binding site motif A %28P-loop%29.;Dbxref=GeneID:1174174;gbkey=misc_feature;gene=potG
NC_003143.1	RefSeq	region	1498018	1498062	.	+	.	ID=id898;Note=PS00211 ABC transporters family signature.;Dbxref=GeneID:1174174;gbkey=misc_feature;gene=potG
NC_003143.1	RefSeq	gene	1498729	1499694	.	+	.	ID=gene1287;Name=potH;Dbxref=GeneID:1174175;gbkey=Gene;gene=potH;locus_tag=YPO1333
NC_003143.1	RefSeq	CDS	1498729	1499694	.	+	0	ID=cds1228;Name=YP_002346358.1;Parent=gene1287;Dbxref=InterPro:IPR000515,InterPro:IPR000834,UniProtKB%2FTrEMBL:Q7CHG7,Genbank:YP_002346358.1,GeneID:1174175;gbkey=CDS;gene=potH;product=putrescine ABC transporter membrane protein;protein_id=YP_002346358.1;transl_table=11
NC_003143.1	RefSeq	region	1498819	1498851	.	+	.	ID=id899;Note=PS00133 Zinc carboxypeptidases%2C zinc-binding region 2 signature.;Dbxref=GeneID:1174175;gbkey=misc_feature;gene=potH
NC_003143.1	RefSeq	region	1499359	1499445	.	+	.	ID=id900;Note=PS00402 Binding-protein-dependent transport systems inner membrane comp. sign.;Dbxref=GeneID:1174175;gbkey=misc_feature;gene=potH
NC_003143.1	RefSeq	gene	1499691	1500536	.	+	.	ID=gene1288;Name=potI;Dbxref=GeneID:1174176;gbkey=Gene;gene=potI;locus_tag=YPO1334
NC_003143.1	RefSeq	CDS	1499691	1500536	.	+	0	ID=cds1229;Name=YP_002346359.1;Parent=gene1288;Dbxref=InterPro:IPR000515,UniProtKB%2FTrEMBL:Q7CHG8,Genbank:YP_002346359.1,GeneID:1174176;gbkey=CDS;gene=potI;product=putrescine ABC transporter membrane protein;protein_id=YP_002346359.1;transl_table=11
NC_003143.1	RefSeq	region	1500177	1500263	.	+	.	ID=id901;Note=PS00402 Binding-protein-dependent transport systems inner membrane comp. sign.;Dbxref=GeneID:1174176;gbkey=misc_feature;gene=potI
NC_003143.1	RefSeq	gene	1500661	1501125	.	+	.	ID=gene1289;Name=YPO1335;Dbxref=GeneID:1174177;gbkey=Gene;locus_tag=YPO1335
NC_003143.1	RefSeq	CDS	1500661	1501125	.	+	0	ID=cds1230;Name=YP_002346360.1;Parent=gene1289;Dbxref=UniProtKB%2FTrEMBL:Q7CHG9,Genbank:YP_002346360.1,GeneID:1174177;gbkey=CDS;product=hypothetical protein;protein_id=YP_002346360.1;transl_table=11
NC_003143.1	RefSeq	gene	1501209	1502339	.	+	.	ID=gene1290;Name=rumB;Dbxref=GeneID:1174178;gbkey=Gene;gene=rumB;locus_tag=YPO1336
NC_003143.1	RefSeq	CDS	1501209	1502339	.	+	0	ID=cds1231;Name=YP_002346361.1;Parent=gene1290;Note=RNA uridine methyltransferase B%3B catalyzes the formation of 5-methyl-uridine at position 747 in 23S rRNA;Dbxref=InterPro:IPR010280,InterPro:IPR011825,UniProtKB%2FTrEMBL:Q0WH77,Genbank:YP_002346361.1,GeneID:1174178;gbkey=CDS;gene=rumB;product=23S rRNA methyluridine methyltransferase;protein_id=YP_002346361.1;transl_table=11
NC_003143.1	RefSeq	region	1502127	1502222	.	+	.	ID=id902;Note=PS01230 RNA methyltransferase trmA family signature 1.;Dbxref=GeneID:1174178;gbkey=misc_feature;gene=rumB
NC_003143.1	RefSeq	region	1502277	1502309	.	+	.	ID=id903;Note=PS01231 RNA methyltransferase trmA family signature 2.;Dbxref=GeneID:1174178;gbkey=misc_feature;gene=rumB
NC_003143.1	RefSeq	region	1504695	1505156	.	-	.	ID=id904;Note=Similar to Escherichia coli arginine-binding periplasmic protein 2 precursor ArtJ SW:ARTJ_ECOLI %28P30860%29 %28243 aa%29 fasta scores: E%28%29: 0%2C 78.6%25 id in 243 aa%2C and to Escherichia coli arginine-binding periplasmic protein 1 precursor ArtI SW:ARTI_ECOLI %28P30859%29 %28243 aa%29 fasta scores: E%28%29: 0%2C 67.5%25 id in 243 aa. Disrupted by the isertion of an IS100 element after codon 154.;Dbxref=PSEUDO:CAL19990.1;gbkey=misc_feature;part=1%2F2;pseudo=true
NC_003143.1	RefSeq	region	1502466	1502735	.	-	.	ID=id904;Note=Similar to Escherichia coli arginine-binding periplasmic protein 2 precursor ArtJ SW:ARTJ_ECOLI %28P30860%29 %28243 aa%29 fasta scores: E%28%29: 0%2C 78.6%25 id in 243 aa%2C and to Escherichia coli arginine-binding periplasmic protein 1 precursor ArtI SW:ARTI_ECOLI %28P30859%29 %28243 aa%29 fasta scores: E%28%29: 0%2C 67.5%25 id in 243 aa. Disrupted by the isertion of an IS100 element after codon 154.;Dbxref=PSEUDO:CAL19990.1;gbkey=misc_feature;part=2%2F2;pseudo=true
NC_003143.1	RefSeq	repeat_region	1502741	1504694	.	+	.	ID=id905;Note=insertion sequence:IS100;gbkey=repeat_region
NC_003143.1	RefSeq	repeat_region	1502741	1502768	.	+	.	ID=id906;Note=IS100 inverted repeat;gbkey=repeat_region
NC_003143.1	RefSeq	gene	1502827	1503849	.	+	.	ID=gene1291;Name=y1093;Dbxref=GeneID:1174180;gbkey=Gene;gene=y1093;gene_synonym=ypmt1;locus_tag=YPO1338
NC_003143.1	RefSeq	CDS	1502827	1503849	.	+	0	ID=cds1232;Name=YP_002346362.1;Parent=gene1291;Dbxref=InterPro:IPR001584,InterPro:IPR006120,InterPro:IPR009057,InterPro:IPR012287,InterPro:IPR012337,UniProtKB%2FTrEMBL:Q7ARN5,Genbank:YP_002346362.1,GeneID:1174180;gbkey=CDS;gene=y1093;product=transposase for insertion sequence IS100;protein_id=YP_002346362.1;transl_table=11
NC_003143.1	RefSeq	region	1502878	1502943	.	+	.	ID=id907;Note=Predicted helix-turn-helix motif with score 2147 %28%2B6.50 SD%29 at aa 18-39%2C sequence MSSRAIARELGISRNTVKRYLQ;Dbxref=GeneID:1174180;gbkey=misc_feature;gene=y1093
NC_003143.1	RefSeq	gene	1503846	1504628	.	+	.	ID=gene1292;Name=YPO1339;Note=ypmt1.57c;Dbxref=GeneID:1174181;gbkey=Gene;locus_tag=YPO1339
NC_003143.1	RefSeq	CDS	1503846	1504628	.	+	0	ID=cds1233;Name=YP_002346363.1;Parent=gene1292;Dbxref=InterPro:IPR001270,InterPro:IPR002611,InterPro:IPR003593,UniProtKB%2FTrEMBL:Q7ARK4,Genbank:YP_002346363.1,GeneID:1174181;gbkey=CDS;product=transposase%2FIS protein;protein_id=YP_002346363.1;transl_table=11
NC_003143.1	RefSeq	region	1504173	1504196	.	+	.	ID=id908;Note=PS00017 ATP%2FGTP-binding site motif A %28P-loop%29.;Dbxref=GeneID:1174181;gbkey=misc_feature
NC_003143.1	RefSeq	repeat_region	1504667	1504694	.	-	.	ID=id909;Note=IS100 inverted repeat;gbkey=repeat_region
NC_003143.1	RefSeq	region	1504983	1505024	.	-	.	ID=id910;Note=PS01039 Bacterial extracellular solute-binding proteins%2C family 3 signature.;gbkey=misc_feature
NC_003143.1	RefSeq	ribosome_entry_site	1505392	1505396	.	+	.	ID=id911;gbkey=RBS
NC_003143.1	RefSeq	gene	1505404	1505634	.	+	.	ID=gene1293;Name=YPO1341;Dbxref=GeneID:1174182;gbkey=Gene;locus_tag=YPO1341
NC_003143.1	RefSeq	CDS	1505404	1505634	.	+	0	ID=cds1234;Name=YP_002346364.1;Parent=gene1293;Note=No significant database hits;Dbxref=UniProtKB%2FTrEMBL:Q74VP0,Genbank:YP_002346364.1,GeneID:1174182;gbkey=CDS;product=hypothetical protein;protein_id=YP_002346364.1;transl_table=11
NC_003143.1	RefSeq	region	1505560	1505628	.	+	.	ID=id912;Note=1 probable transmembrane helix predicted;Dbxref=GeneID:1174182;gbkey=misc_feature
NC_003143.1	RefSeq	gene	1505975	1506901	.	+	.	ID=gene1294;Name=YPO1342;Dbxref=GeneID:1174183;gbkey=Gene;locus_tag=YPO1342
NC_003143.1	RefSeq	CDS	1505975	1506901	.	+	0	ID=cds1235;Name=YP_002346365.1;Parent=gene1294;Dbxref=InterPro:IPR001107,UniProtKB%2FTrEMBL:Q7CHH0,Genbank:YP_002346365.1,GeneID:1174183;gbkey=CDS;product=SPFH domain protein;protein_id=YP_002346365.1;transl_table=11
NC_003143.1	RefSeq	gene	1507268	1508404	.	+	.	ID=gene1295;Name=YPO1343;Dbxref=GeneID:1174184;gbkey=Gene;locus_tag=YPO1343
NC_003143.1	RefSeq	CDS	1507268	1508404	.	+	0	ID=cds1236;Name=YP_002346366.1;Parent=gene1295;Dbxref=InterPro:IPR002491,UniProtKB%2FTrEMBL:Q7CHH1,Genbank:YP_002346366.1,GeneID:1174184;gbkey=CDS;product=periplasmic binding protein;protein_id=YP_002346366.1;transl_table=11
NC_003143.1	RefSeq	gene	1508404	1509460	.	+	.	ID=gene1296;Name=YPO1344;Dbxref=GeneID:1174185;gbkey=Gene;locus_tag=YPO1344;pseudo=true
NC_003143.1	RefSeq	gene	1509457	1510242	.	+	.	ID=gene1297;Name=YPO1345;Dbxref=GeneID:1174186;gbkey=Gene;locus_tag=YPO1345
NC_003143.1	RefSeq	CDS	1509457	1510242	.	+	0	ID=cds1237;Name=YP_002346368.1;Parent=gene1297;Dbxref=InterPro:IPR003439,InterPro:IPR003593,UniProtKB%2FTrEMBL:Q7CHH2,Genbank:YP_002346368.1,GeneID:1174186;gbkey=CDS;product=transport ATP-binding protein;protein_id=YP_002346368.1;transl_table=11
NC_003143.1	RefSeq	region	1509562	1509585	.	+	.	ID=id913;Note=PS00017 ATP%2FGTP-binding site motif A %28P-loop%29.;Dbxref=GeneID:1174186;gbkey=misc_feature
NC_003143.1	RefSeq	region	1509850	1509894	.	+	.	ID=id914;Note=PS00211 ABC transporters family signature.;Dbxref=GeneID:1174186;gbkey=misc_feature
NC_003143.1	RefSeq	gene	1510239	1511027	.	+	.	ID=gene1298;Name=YPO1346;Dbxref=GeneID:1174187;gbkey=Gene;locus_tag=YPO1346
NC_003143.1	RefSeq	CDS	1510239	1511027	.	+	0	ID=cds1238;Name=YP_002346369.1;Parent=gene1298;Dbxref=UniProtKB%2FTrEMBL:Q0WH69,Genbank:YP_002346369.1,GeneID:1174187;gbkey=CDS;product=hypothetical protein;protein_id=YP_002346369.1;transl_table=11
NC_003143.1	RefSeq	gene	1511020	1512390	.	+	.	ID=gene1299;Name=YPO1347;Dbxref=GeneID:1174188;gbkey=Gene;locus_tag=YPO1347
NC_003143.1	RefSeq	CDS	1511020	1512390	.	+	0	ID=cds1239;Name=YP_002346370.1;Parent=gene1299;Dbxref=UniProtKB%2FTrEMBL:Q0WH68,Genbank:YP_002346370.1,GeneID:1174188;gbkey=CDS;product=hypothetical protein;protein_id=YP_002346370.1;transl_table=11
NC_003143.1	RefSeq	gene	1512387	1513232	.	+	.	ID=gene1300;Name=YPO1348;Dbxref=GeneID:1174189;gbkey=Gene;locus_tag=YPO1348
NC_003143.1	RefSeq	CDS	1512387	1513232	.	+	0	ID=cds1240;Name=YP_002346371.1;Parent=gene1300;Dbxref=InterPro:IPR000620,UniProtKB%2FTrEMBL:Q0WH67,Genbank:YP_002346371.1,GeneID:1174189;gbkey=CDS;product=hypothetical protein;protein_id=YP_002346371.1;transl_table=11
NC_003143.1	RefSeq	gene	1513422	1514090	.	-	.	ID=gene1301;Name=artM;Dbxref=GeneID:1174190;gbkey=Gene;gene=artM;locus_tag=YPO1349
NC_003143.1	RefSeq	CDS	1513422	1514090	.	-	0	ID=cds1241;Name=YP_002346372.1;Parent=gene1301;Note=with ArtPQJI acts to transport arginine across the inner membrane;Dbxref=InterPro:IPR000515,InterPro:IPR010065,UniProtKB%2FTrEMBL:Q7CHH3,Genbank:YP_002346372.1,GeneID:1174190;gbkey=CDS;gene=artM;product=arginine transporter permease ArtM;protein_id=YP_002346372.1;transl_table=11
NC_003143.1	RefSeq	gene	1514090	1514806	.	-	.	ID=gene1302;Name=artQ;Dbxref=GeneID:1174191;gbkey=Gene;gene=artQ;locus_tag=YPO1350
NC_003143.1	RefSeq	CDS	1514090	1514806	.	-	0	ID=cds1242;Name=YP_002346373.1;Parent=gene1302;Note=with ArtPMJI transports arginine across the inner membrane;Dbxref=InterPro:IPR000515,InterPro:IPR003439,InterPro:IPR010065,UniProtKB%2FTrEMBL:Q7CHH4,Genbank:YP_002346373.1,GeneID:1174191;gbkey=CDS;gene=artQ;product=arginine transporter permease ArtQ;protein_id=YP_002346373.1;transl_table=11
NC_003143.1	RefSeq	region	1514342	1514428	.	-	.	ID=id915;Note=PS00402 Binding-protein-dependent transport systems inner membrane comp. sign.;Dbxref=GeneID:1174191;gbkey=misc_feature;gene=artQ
NC_003143.1	RefSeq	region	1514669	1514713	.	-	.	ID=id916;Note=PS00211 ABC transporters family signature.;Dbxref=GeneID:1174191;gbkey=misc_feature;gene=artQ
NC_003143.1	RefSeq	gene	1514818	1515549	.	-	.	ID=gene1303;Name=artI;Dbxref=GeneID:1174192;gbkey=Gene;gene=artI;locus_tag=YPO1351
NC_003143.1	RefSeq	CDS	1514818	1515549	.	-	0	ID=cds1243;Name=YP_002346374.1;Parent=gene1303;Dbxref=InterPro:IPR001638,InterPro:IPR005768,UniProtKB%2FTrEMBL:Q0WH64,Genbank:YP_002346374.1,GeneID:1174192;gbkey=CDS;gene=artI;product=arginine-binding periplasmic protein 1;protein_id=YP_002346374.1;transl_table=11
NC_003143.1	RefSeq	region	1515376	1515417	.	-	.	ID=id917;Note=PS01039 Bacterial extracellular solute-binding proteins%2C family 3 signature.;Dbxref=GeneID:1174192;gbkey=misc_feature;gene=artI
NC_003143.1	RefSeq	gene	1515570	1516298	.	-	.	ID=gene1304;Name=artP;Dbxref=GeneID:1174193;gbkey=Gene;gene=artP;locus_tag=YPO1352
NC_003143.1	RefSeq	CDS	1515570	1516298	.	-	0	ID=cds1244;Name=YP_002346375.1;Parent=gene1304;Note=With ArtMQJI transports arginine across the inner membrane;Dbxref=InterPro:IPR003439,InterPro:IPR003593,UniProtKB%2FTrEMBL:Q74VQ1,Genbank:YP_002346375.1,GeneID:1174193;gbkey=CDS;gene=artP;product=arginine transporter ATP-binding protein;protein_id=YP_002346375.1;transl_table=11
NC_003143.1	RefSeq	region	1515831	1515875	.	-	.	ID=id918;Note=PS00211 ABC transporters family signature.;Dbxref=GeneID:1174193;gbkey=misc_feature;gene=artP
NC_003143.1	RefSeq	region	1516173	1516196	.	-	.	ID=id919;Note=PS00017 ATP%2FGTP-binding site motif A %28P-loop%29.;Dbxref=GeneID:1174193;gbkey=misc_feature;gene=artP
NC_003143.1	RefSeq	gene	1516593	1517153	.	-	.	ID=gene1305;Name=YPO1353;Dbxref=GeneID:1174194;gbkey=Gene;locus_tag=YPO1353
NC_003143.1	RefSeq	CDS	1516593	1517153	.	-	0	ID=cds1245;Name=YP_002346376.1;Parent=gene1305;Note=catalyzes the interconversion of chorismate to prephenate;Dbxref=InterPro:IPR002701,InterPro:IPR008240,InterPro:IPR012279,UniProtKB%2FTrEMBL:Q7CHH5,Genbank:YP_002346376.1,GeneID:1174194;gbkey=CDS;product=chorismate mutase;protein_id=YP_002346376.1;transl_table=11
NC_003143.1	RefSeq	gene	1517323	1517898	.	-	.	ID=gene1306;Name=YPO1354;Dbxref=GeneID:1174195;gbkey=Gene;locus_tag=YPO1354
NC_003143.1	RefSeq	CDS	1517323	1517898	.	-	0	ID=cds1246;Name=YP_002346377.1;Parent=gene1306;Note=induced during stationary phase and by acivicin %28a glutamine analog%29%3B regulated by Lrp and RpoS;Dbxref=UniProtKB%2FTrEMBL:Q7CHH6,Genbank:YP_002346377.1,GeneID:1174195;gbkey=CDS;product=lipoprotein;protein_id=YP_002346377.1;transl_table=11
NC_003143.1	RefSeq	region	1517842	1517874	.	-	.	ID=id920;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site.;Dbxref=GeneID:1174195;gbkey=misc_feature
NC_003143.1	RefSeq	gene	1517995	1519002	.	-	.	ID=gene1307;Name=YPO1355;Dbxref=GeneID:1174196;gbkey=Gene;locus_tag=YPO1355
NC_003143.1	RefSeq	CDS	1517995	1519002	.	-	0	ID=cds1247;Name=YP_002346378.1;Parent=gene1307;Dbxref=InterPro:IPR001509,UniProtKB%2FTrEMBL:Q74VQ4,Genbank:YP_002346378.1,GeneID:1174196;gbkey=CDS;product=hypothetical protein;protein_id=YP_002346378.1;transl_table=11
NC_003143.1	RefSeq	gene	1519102	1520592	.	-	.	ID=gene1308;Name=YPO1356;Dbxref=GeneID:1174197;gbkey=Gene;locus_tag=YPO1356
NC_003143.1	RefSeq	CDS	1519102	1520592	.	-	0	ID=cds1248;Name=YP_002346379.1;Parent=gene1308;Dbxref=InterPro:IPR001509,UniProtKB%2FTrEMBL:Q7CHH7,Genbank:YP_002346379.1,GeneID:1174197;gbkey=CDS;product=hypothetical protein;protein_id=YP_002346379.1;transl_table=11
NC_003143.1	RefSeq	region	1519198	1519263	.	-	.	ID=id921;Note=1 probable transmembrane helix predicted;Dbxref=GeneID:1174197;gbkey=misc_feature
NC_003143.1	RefSeq	gene	1520589	1521608	.	-	.	ID=gene1309;Name=ltaA;Dbxref=GeneID:1174198;gbkey=Gene;gene=ltaA;locus_tag=YPO1357
NC_003143.1	RefSeq	CDS	1520589	1521608	.	-	0	ID=cds1249;Name=YP_002346380.1;Parent=gene1309;Note=low- specificity%3B catalyzes the formation of acetaldehyde and glycine from L-threonine%3B acts on L-threonine%2C L-allo-threonine%2C L-threo-phenylserine%2C and L-erythro-phenylserine;Dbxref=InterPro:IPR001597,UniProtKB%2FTrEMBL:Q7CHH8,Genbank:YP_002346380.1,GeneID:1174198;gbkey=CDS;gene=ltaA;product=L-threonine aldolase;protein_id=YP_002346380.1;transl_table=11
NC_003143.1	RefSeq	gene	1521957	1523678	.	-	.	ID=gene1310;Name=poxB;Dbxref=GeneID:1174199;gbkey=Gene;gene=poxB;locus_tag=YPO1358
NC_003143.1	RefSeq	CDS	1521957	1523678	.	-	0	ID=cds1250;Name=YP_002346381.1;Parent=gene1310;Note=catalyzes the formation of acetate from pyruvate;Dbxref=InterPro:IPR000399,InterPro:IPR011766,InterPro:IPR012000,InterPro:IPR012001,UniProtKB%2FTrEMBL:Q7CHH9,Genbank:YP_002346381.1,GeneID:1174199;gbkey=CDS;gene=poxB;product=pyruvate dehydrogenase;protein_id=YP_002346381.1;transl_table=11
NC_003143.1	RefSeq	region	1522371	1522430	.	-	.	ID=id922;Note=PS00187 Thiamine pyrophosphate enzymes signature.;Dbxref=GeneID:1174199;gbkey=misc_feature;gene=poxB
NC_003143.1	RefSeq	gene	1523822	1524844	.	-	.	ID=gene1311;Name=hcr;Dbxref=GeneID:1174200;gbkey=Gene;gene=hcr;locus_tag=YPO1359
NC_003143.1	RefSeq	CDS	1523822	1524844	.	-	0	ID=cds1251;Name=YP_002346382.1;Parent=gene1311;Dbxref=InterPro:IPR001041,InterPro:IPR001433,InterPro:IPR001834,InterPro:IPR006058,InterPro:IPR008333,InterPro:IPR012675,UniProtKB%2FTrEMBL:Q0WH56,Genbank:YP_002346382.1,GeneID:1174200;gbkey=CDS;gene=hcr;product=HCP oxidoreductase%2C NADH-dependent;protein_id=YP_002346382.1;transl_table=11
NC_003143.1	RefSeq	region	1523948	1523974	.	-	.	ID=id923;Note=PS00197 2Fe-2S ferredoxins%2C iron-sulfur binding region signature.;Dbxref=GeneID:1174200;gbkey=misc_feature;gene=hcr
NC_003143.1	RefSeq	gene	1524958	1526610	.	-	.	ID=gene1312;Name=hcp;Dbxref=GeneID:1174201;gbkey=Gene;gene=hcp;locus_tag=YPO1360
NC_003143.1	RefSeq	CDS	1524958	1526610	.	-	0	ID=cds1252;Name=YP_002346383.1;Parent=gene1312;Note=catalyzes the reduction of hydroxylamine to ammonia and water;Dbxref=InterPro:IPR004137,InterPro:IPR010048,InterPro:IPR011254,UniProtKB%2FTrEMBL:Q0WH55,Genbank:YP_002346383.1,GeneID:1174201;gbkey=CDS;gene=hcp;product=hydroxylamine reductase;protein_id=YP_002346383.1;transl_table=11
NC_003143.1	RefSeq	STS	1525855	1526665	.	+	.	ID=id924;Dbxref=UniSTS:474273;gbkey=STS;gene=hcp
NC_003143.1	RefSeq	region	1526527	1526550	.	-	.	ID=id925;Note=PS00017 ATP%2FGTP-binding site motif A %28P-loop%29.;Dbxref=GeneID:1174201;gbkey=misc_feature;gene=hcp
NC_003143.1	RefSeq	gene	1526812	1527708	.	-	.	ID=gene1313;Name=YPO1361;Dbxref=GeneID:1174202;gbkey=Gene;locus_tag=YPO1361
NC_003143.1	RefSeq	CDS	1526812	1527708	.	-	0	ID=cds1253;Name=YP_002346384.1;Parent=gene1313;Dbxref=InterPro:IPR005642,UniProtKB%2FTrEMBL:Q7CHI0,Genbank:YP_002346384.1,GeneID:1174202;gbkey=CDS;product=hypothetical protein;protein_id=YP_002346384.1;transl_table=11
NC_003143.1	RefSeq	gene	1528061	1529728	.	+	.	ID=gene1314;Name=YPO1362;Dbxref=GeneID:1174203;gbkey=Gene;locus_tag=YPO1362
NC_003143.1	RefSeq	CDS	1528061	1529728	.	+	0	ID=cds1254;Name=YP_002346385.1;Parent=gene1314;Dbxref=UniProtKB%2FTrEMBL:Q0WH53,Genbank:YP_002346385.1,GeneID:1174203;gbkey=CDS;product=hypothetical protein;protein_id=YP_002346385.1;transl_table=11
NC_003143.1	RefSeq	region	1528145	1528168	.	+	.	ID=id926;Note=PS00017 ATP%2FGTP-binding site motif A %28P-loop%29.;Dbxref=GeneID:1174203;gbkey=misc_feature
NC_003143.1	RefSeq	gene	1529865	1530812	.	-	.	ID=gene1315;Name=YPO1363;Dbxref=GeneID:1174204;gbkey=Gene;locus_tag=YPO1363
NC_003143.1	RefSeq	CDS	1529865	1530812	.	-	0	ID=cds1255;Name=YP_002346386.1;Parent=gene1315;Dbxref=InterPro:IPR007488,UniProtKB%2FTrEMBL:Q7CHI1,Genbank:YP_002346386.1,GeneID:1174204;gbkey=CDS;product=virulence factor;protein_id=YP_002346386.1;transl_table=11
NC_003143.1	RefSeq	ribosome_entry_site	1531033	1531038	.	+	.	ID=id927;gbkey=RBS
NC_003143.1	RefSeq	gene	1531046	1532161	.	+	.	ID=gene1316;Name=YPO1364;Dbxref=GeneID:1174205;gbkey=Gene;locus_tag=YPO1364
NC_003143.1	RefSeq	CDS	1531046	1532161	.	+	0	ID=cds1256;Name=YP_002346387.1;Parent=gene1316;Note=confers macrolide resistance via active drug efflux;Dbxref=InterPro:IPR006143,InterPro:IPR011053,InterPro:IPR011055,UniProtKB%2FTrEMBL:Q0WH51,Genbank:YP_002346387.1,GeneID:1174205;gbkey=CDS;product=macrolide transporter subunit MacA;protein_id=YP_002346387.1;transl_table=11
NC_003143.1	RefSeq	region	1531079	1531138	.	+	.	ID=id928;Note=1 probable transmembrane helix predicted;Dbxref=GeneID:1174205;gbkey=misc_feature
NC_003143.1	RefSeq	region	1531973	1532038	.	+	.	ID=id929;Note=Predicted helix-turn-helix motif with score 1088 %28%2B2.89 SD%29 at aa 310-331%2C sequence IPLAALGDELGSNRYQVTVLKE;Dbxref=GeneID:1174205;gbkey=misc_feature
NC_003143.1	RefSeq	gene	1532161	1534110	.	+	.	ID=gene1317;Name=YPO1365;Dbxref=GeneID:1174206;gbkey=Gene;locus_tag=YPO1365
NC_003143.1	RefSeq	CDS	1532161	1534110	.	+	0	ID=cds1257;Name=YP_002346388.1;Parent=gene1317;Note=with MacA is involved in the export of macrolide;Dbxref=InterPro:IPR003439,InterPro:IPR003593,InterPro:IPR003838,UniProtKB%2FTrEMBL:Q7CHI2,Genbank:YP_002346388.1,GeneID:1174206;gbkey=CDS;product=macrolide transporter ATP-binding %2Fpermease;protein_id=YP_002346388.1;transl_table=11
NC_003143.1	RefSeq	region	1532281	1532304	.	+	.	ID=id930;Note=PS00017 ATP%2FGTP-binding site motif A %28P-loop%29.;Dbxref=GeneID:1174206;gbkey=misc_feature
NC_003143.1	RefSeq	region	1532593	1532637	.	+	.	ID=id931;Note=PS00211 ABC transporters family signature.;Dbxref=GeneID:1174206;gbkey=misc_feature
NC_003143.1	RefSeq	gene	1534391	1534654	.	-	.	ID=gene1318;Name=cspD;Dbxref=GeneID:1174207;gbkey=Gene;gene=cspD;gene_synonym=cspH;locus_tag=YPO1366
NC_003143.1	RefSeq	CDS	1534391	1534654	.	-	0	ID=cds1258;Name=YP_002346389.1;Parent=gene1318;Dbxref=InterPro:IPR002059,InterPro:IPR008994,InterPro:IPR011129,InterPro:IPR012340,InterPro:IPR012751,UniProtKB%2FTrEMBL:Q74VR5,Genbank:YP_002346389.1,GeneID:1174207;gbkey=CDS;gene=cspD;product=cold shock-like protein;protein_id=YP_002346389.1;transl_table=11
NC_003143.1	RefSeq	region	1534553	1534612	.	-	.	ID=id932;Note=PS00352 %27Cold-shock%27 DNA-binding domain signature.;Dbxref=GeneID:1174207;gbkey=misc_feature;gene=cspD
NC_003143.1	RefSeq	gene	1535015	1535335	.	+	.	ID=gene1319;Name=clpS;Dbxref=GeneID:1174208;gbkey=Gene;gene=clpS;locus_tag=YPO1367
NC_003143.1	RefSeq	CDS	1535015	1535335	.	+	0	ID=cds1259;Name=YP_002346390.1;Parent=gene1319;Note=involved in the modulation of the specificity of the ClpAP-mediated ATP-dependent protein degradation%3B binds to the N-terminal domain of the chaperone ClpA;Dbxref=InterPro:IPR003769,UniProtKB%2FTrEMBL:Q0WH48,Genbank:YP_002346390.1,GeneID:1174208;gbkey=CDS;gene=clpS;product=ATP-dependent Clp protease adaptor protein ClpS;protein_id=YP_002346390.1;transl_table=11
NC_003143.1	RefSeq	gene	1535361	1537637	.	+	.	ID=gene1320;Name=clpA;Dbxref=GeneID:1174209;gbkey=Gene;gene=clpA;gene_synonym=lopD;locus_tag=YPO1368
NC_003143.1	RefSeq	CDS	1535361	1537637	.	+	0	ID=cds1260;Name=YP_002346391.1;Parent=gene1320;Note=ATPase and specificity subunit of the ClpA-ClpP ATP dependent serine protease%3B directs protease to specific substrates;Dbxref=InterPro:IPR001270,InterPro:IPR003593,InterPro:IPR003959,InterPro:IPR004176,InterPro:IPR013093,InterPro:IPR013461,UniProtKB%2FTrEMBL:Q0WH47,Genbank:YP_002346391.1,GeneID:1174209;gbkey=CDS;gene=clpA;product=ATP-dependent Clp protease ATP-binding subunit;protein_id=YP_002346391.1;transl_table=11
NC_003143.1	RefSeq	region	1535997	1536020	.	+	.	ID=id933;Note=PS00017 ATP%2FGTP-binding site motif A %28P-loop%29.;Dbxref=GeneID:1174209;gbkey=misc_feature;gene=clpA
NC_003143.1	RefSeq	region	1536261	1536299	.	+	.	ID=id934;Note=PS00870 Chaperonins clpA%2FB signature 1.;Dbxref=GeneID:1174209;gbkey=misc_feature;gene=clpA
NC_003143.1	RefSeq	region	1536840	1536863	.	+	.	ID=id935;Note=PS00017 ATP%2FGTP-binding site motif A %28P-loop%29.;Dbxref=GeneID:1174209;gbkey=misc_feature;gene=clpA
NC_003143.1	RefSeq	region	1536909	1536965	.	+	.	ID=id936;Note=PS00871 Chaperonins clpA%2FB signature 2.;Dbxref=GeneID:1174209;gbkey=misc_feature;gene=clpA
NC_003143.1	RefSeq	repeat_region	1537785	1538496	.	+	.	ID=id937;Note=Contains a %27A%27 at nucleotide position 315%7EIS200-like insertion sequence:IS1541;gbkey=repeat_region
NC_003143.1	RefSeq	gene	1537930	1538388	.	+	.	ID=gene1321;Name=tnp;Dbxref=GeneID:1174210;gbkey=Gene;gene=tnp;locus_tag=YPO1369
NC_003143.1	RefSeq	CDS	1537930	1538388	.	+	0	ID=cds1261;Name=YP_002346392.1;Parent=gene1321;Dbxref=InterPro:IPR002686,UniProtKB%2FTrEMBL:Q56938,Genbank:YP_002346392.1,GeneID:1174210;gbkey=CDS;gene=tnp;product=transposase for the IS1541 insertion element;protein_id=YP_002346392.1;transl_table=11
NC_003143.1	RefSeq	gene	1538760	1538978	.	-	.	ID=gene1322;Name=infA;Dbxref=GeneID:1174211;gbkey=Gene;gene=infA;locus_tag=YPO1370
NC_003143.1	RefSeq	CDS	1538760	1538978	.	-	0	ID=cds1262;Name=YP_002346393.1;Parent=gene1322;Note=stimulates the activities of the other two initiation factors%2C IF-2 and IF-3;Dbxref=InterPro:IPR003029,InterPro:IPR004368,InterPro:IPR006196,InterPro:IPR008994,InterPro:IPR012340,UniProtKB%2FTrEMBL:Q0WH45,Genbank:YP_002346393.1,GeneID:1174211;gbkey=CDS;gene=infA;product=translation initiation factor IF-1;protein_id=YP_002346393.1;transl_table=11
NC_003143.1	RefSeq	gene	1539144	1539854	.	-	.	ID=gene1323;Name=aat;Dbxref=GeneID:1174212;gbkey=Gene;gene=aat;locus_tag=YPO1371
NC_003143.1	RefSeq	CDS	1539144	1539854	.	-	0	ID=cds1263;Name=YP_002346394.1;Parent=gene1323;Note=leucyltransferase%3B phenylalanyltransferse%3B functions in the N-end rule pathway%3B transfers Leu%2C Phe%2C Met%2C from aminoacyl-tRNAs to N-terminal of proteins with Arg or Lys;Dbxref=InterPro:IPR004616,UniProtKB%2FTrEMBL:Q0WH44,Genbank:YP_002346394.1,GeneID:1174212;gbkey=CDS;gene=aat;product=leucyl%2Fphenylalanyl-tRNA--protein transferase;protein_id=YP_002346394.1;transl_table=11
NC_003143.1	RefSeq	gene	1540073	1541797	.	-	.	ID=gene1324;Name=cydC;Dbxref=GeneID:1174213;gbkey=Gene;gene=cydC;gene_synonym=mdrA,mdrH,surB;locus_tag=YPO1372
NC_003143.1	RefSeq	CDS	1540073	1541797	.	-	0	ID=cds1264;Name=YP_002346395.1;Parent=gene1324;Note=in Escherichia coli the CydCD ABC transporter exports cysteine and glutathione into the periplasm in order to maintain redox balance%3B important for cytochrome bd and c;Dbxref=InterPro:IPR003439,InterPro:IPR003593,InterPro:IPR011527,UniProtKB%2FTrEMBL:Q7CHI4,Genbank:YP_002346395.1,GeneID:1174213;gbkey=CDS;gene=cydC;product=cysteine%2Fglutathione ABC transporter membrane protein%2FATP-binding protein;protein_id=YP_002346395.1;transl_table=11
NC_003143.1	RefSeq	region	1540328	1540372	.	-	.	ID=id938;Note=PS00211 ABC transporters family signature.;Dbxref=GeneID:1174213;gbkey=misc_feature;gene=cydC
NC_003143.1	RefSeq	region	1540658	1540681	.	-	.	ID=id939;Note=PS00017 ATP%2FGTP-binding site motif A %28P-loop%29.;Dbxref=GeneID:1174213;gbkey=misc_feature;gene=cydC
NC_003143.1	RefSeq	gene	1541800	1543584	.	-	.	ID=gene1325;Name=cydD;Dbxref=GeneID:1174214;gbkey=Gene;gene=cydD;gene_synonym=htrD;locus_tag=YPO1373
NC_003143.1	RefSeq	CDS	1541800	1543584	.	-	0	ID=cds1265;Name=YP_002346396.1;Parent=gene1325;Note=in Escherichia coli the CydCD ABC transporter exports cysteine and glutathione into the periplasm in order to maintain redox balance%3B important for cytochrome bd and c;Dbxref=InterPro:IPR001140,InterPro:IPR003439,InterPro:IPR003593,InterPro:IPR011527,UniProtKB%2FTrEMBL:Q7CHI5,Genbank:YP_002346396.1,GeneID:1174214;gbkey=CDS;gene=cydD;product=cysteine%2Fglutathione ABC transporter membrane protein%2FATP-binding protein;protein_id=YP_002346396.1;transl_table=11
NC_003143.1	RefSeq	region	1542067	1542111	.	-	.	ID=id940;Note=PS00211 ABC transporters family signature.;Dbxref=GeneID:1174214;gbkey=misc_feature;gene=cydD
NC_003143.1	RefSeq	region	1542397	1542420	.	-	.	ID=id941;Note=PS00017 ATP%2FGTP-binding site motif A %28P-loop%29.;Dbxref=GeneID:1174214;gbkey=misc_feature;gene=cydD
NC_003143.1	RefSeq	gene	1544025	1544987	.	-	.	ID=gene1326;Name=trxB;Dbxref=GeneID:1174215;gbkey=Gene;gene=trxB;locus_tag=YPO1374
NC_003143.1	RefSeq	CDS	1544025	1544987	.	-	0	ID=cds1266;Name=YP_002346397.1;Parent=gene1326;Dbxref=InterPro:IPR000103,InterPro:IPR000759,InterPro:IPR001327,InterPro:IPR005982,InterPro:IPR008255,InterPro:IPR013027,UniProtKB%2FTrEMBL:Q7CHI6,Genbank:YP_002346397.1,GeneID:1174215;gbkey=CDS;gene=trxB;product=thioredoxin reductase;protein_id=YP_002346397.1;transl_table=11
NC_003143.1	RefSeq	region	1544520	1544582	.	-	.	ID=id942;Note=PS00573 Pyridine nucleotide-disulphide oxidoreductases class-II active site.;Dbxref=GeneID:1174215;gbkey=misc_feature;gene=trxB
NC_003143.1	RefSeq	gene	1545754	1546248	.	+	.	ID=gene1327;Name=lrp;Dbxref=GeneID:1174216;gbkey=Gene;gene=lrp;gene_synonym=ihb,livR,lrp,oppI;locus_tag=YPO1375
NC_003143.1	RefSeq	CDS	1545754	1546248	.	+	0	ID=cds1267;Name=YP_002346398.1;Parent=gene1327;Note=mediates a global response to leucine%3B acts as a regulator for several genes involved in the high-affinity branched-chain amino acid transport system;Dbxref=InterPro:IPR000485,InterPro:IPR011008,InterPro:IPR011991,UniProtKB%2FTrEMBL:Q7CHI7,Genbank:YP_002346398.1,GeneID:1174216;gbkey=CDS;gene=lrp;product=leucine-responsive transcriptional regulator;protein_id=YP_002346398.1;transl_table=11
NC_003143.1	RefSeq	region	1545841	1545921	.	+	.	ID=id943;Note=PS00519 Bacterial regulatory proteins%2C asnC family signature.;Dbxref=GeneID:1174216;gbkey=misc_feature;gene=lrp
NC_003143.1	RefSeq	gene	1546371	1550288	.	+	.	ID=gene1328;Name=ftsK;Dbxref=GeneID:1174217;gbkey=Gene;gene=ftsK;locus_tag=YPO1376
NC_003143.1	RefSeq	CDS	1546371	1550288	.	+	0	ID=cds1268;Name=YP_002346399.1;Parent=gene1328;Dbxref=InterPro:IPR002543,UniProtKB%2FTrEMBL:Q0WH39,Genbank:YP_002346399.1,GeneID:1174217;gbkey=CDS;gene=ftsK;product=cell division protein;protein_id=YP_002346399.1;transl_table=11
NC_003143.1	RefSeq	region	1548537	1548581	.	+	.	ID=id944;Note=3x repeat: QSTYG;Dbxref=GeneID:1174217;gbkey=misc_feature;gene=ftsK
NC_003143.1	RefSeq	region	1549266	1549289	.	+	.	ID=id945;Note=PS00017 ATP%2FGTP-binding site motif A %28P-loop%29.;Dbxref=GeneID:1174217;gbkey=misc_feature;gene=ftsK
NC_003143.1	RefSeq	gene	1550481	1551089	.	+	.	ID=gene1329;Name=lolA;Dbxref=GeneID:1174218;gbkey=Gene;gene=lolA;gene_synonym=lplA;locus_tag=YPO1377
NC_003143.1	RefSeq	CDS	1550481	1551089	.	+	0	ID=cds1269;Name=YP_002346400.1;Parent=gene1329;Note=participates with LolB in the incorporation of lipoprotein into the outer membrane;Dbxref=InterPro:IPR004564,UniProtKB%2FTrEMBL:Q0WH38,Genbank:YP_002346400.1,GeneID:1174218;gbkey=CDS;gene=lolA;product=outer-membrane lipoprotein carrier protein;protein_id=YP_002346400.1;transl_table=11
NC_003143.1	RefSeq	ribosome_entry_site	1551091	1551095	.	+	.	ID=id946;gbkey=RBS
NC_003143.1	RefSeq	gene	1551100	1552443	.	+	.	ID=gene1330;Name=YPO1378;Dbxref=GeneID:1174219;gbkey=Gene;locus_tag=YPO1378
NC_003143.1	RefSeq	CDS	1551100	1552443	.	+	0	ID=cds1270;Name=YP_002346401.1;Parent=gene1330;Dbxref=InterPro:IPR003593,InterPro:IPR003959,UniProtKB%2FTrEMBL:Q7CHI8,Genbank:YP_002346401.1,GeneID:1174219;gbkey=CDS;product=recombination factor protein RarA;protein_id=YP_002346401.1;transl_table=11
NC_003143.1	RefSeq	region	1551268	1551291	.	+	.	ID=id947;Note=PS00017 ATP%2FGTP-binding site motif A %28P-loop%29.;Dbxref=GeneID:1174219;gbkey=misc_feature
NC_003143.1	RefSeq	gene	1552685	1553977	.	+	.	ID=gene1331;Name=serS;Dbxref=GeneID:1174220;gbkey=Gene;gene=serS;locus_tag=YPO1379
NC_003143.1	RefSeq	CDS	1552685	1553977	.	+	0	ID=cds1271;Name=YP_002346402.1;Parent=gene1331;Note=catalyzes a two-step reaction%2C first charging a serine molecule by linking its carboxyl group to the alpha-phosphate of ATP%2C followed by transfer of the aminoacyl-adenylate to its tRNA;Dbxref=InterPro:IPR002314,InterPro:IPR002317,InterPro:IPR006195,InterPro:IPR010978,UniProtKB%2FTrEMBL:Q0WH36,Genbank:YP_002346402.1,GeneID:1174220;gbkey=CDS;gene=serS;product=seryl-tRNA synthetase;protein_id=YP_002346402.1;transl_table=11
NC_003143.1	RefSeq	region	1553483	1553557	.	+	.	ID=id948;Note=PS00179 Aminoacyl-transfer RNA synthetases class-II signature 1.;Dbxref=GeneID:1174220;gbkey=misc_feature;gene=serS
NC_003143.1	RefSeq	gene	1554240	1555388	.	+	.	ID=gene1332;Name=YPO1380;Dbxref=GeneID:1174221;gbkey=Gene;locus_tag=YPO1380
NC_003143.1	RefSeq	CDS	1554240	1555388	.	+	0	ID=cds1272;Name=YP_002346403.1;Parent=gene1332;Dbxref=InterPro:IPR007114,InterPro:IPR011701,UniProtKB%2FTrEMBL:Q0WH35,Genbank:YP_002346403.1,GeneID:1174221;gbkey=CDS;product=MFS family transporter protein;protein_id=YP_002346403.1;transl_table=11
NC_003143.1	RefSeq	gene	1555542	1556276	.	-	.	ID=gene1333;Name=pflA;Dbxref=GeneID:1174222;gbkey=Gene;gene=pflA;locus_tag=YPO1381
NC_003143.1	RefSeq	CDS	1555542	1556276	.	-	0	ID=cds1273;Name=YP_002346404.1;Parent=gene1333;Note=activates pyruvate formate-lyase 1 under anaerobic conditions;Dbxref=InterPro:IPR001989,InterPro:IPR007197,InterPro:IPR012838,UniProtKB%2FTrEMBL:Q0WH34,Genbank:YP_002346404.1,GeneID:1174222;gbkey=CDS;gene=pflA;product=pyruvate formate lyase-activating enzyme 1;protein_id=YP_002346404.1;transl_table=11
NC_003143.1	RefSeq	region	1556166	1556231	.	-	.	ID=id949;Note=PS01087 Radical activating enzymes signature.;Dbxref=GeneID:1174222;gbkey=misc_feature;gene=pflA
NC_003143.1	RefSeq	region	1556166	1556183	.	-	.	ID=id950;Note=PS00190 Cytochrome c family heme-binding site signature.;Dbxref=GeneID:1174222;gbkey=misc_feature;gene=pflA
NC_003143.1	RefSeq	gene	1557263	1557937	.	+	.	ID=gene1334;Name=YPO1382;Dbxref=GeneID:1174223;gbkey=Gene;locus_tag=YPO1382
NC_003143.1	RefSeq	CDS	1557263	1557937	.	+	0	ID=cds1274;Name=YP_002346405.1;Parent=gene1334;Dbxref=InterPro:IPR002654,UniProtKB%2FTrEMBL:Q7CHJ1,Genbank:YP_002346405.1,GeneID:1174223;gbkey=CDS;product=hypothetical protein;protein_id=YP_002346405.1;transl_table=11
NC_003143.1	RefSeq	gene	1558055	1560337	.	-	.	ID=gene1335;Name=pfl;Dbxref=GeneID:1174224;gbkey=Gene;gene=pfl;gene_synonym=pflB;locus_tag=YPO1383
NC_003143.1	RefSeq	CDS	1558055	1560337	.	-	0	ID=cds1275;Name=YP_002346406.1;Parent=gene1335;Dbxref=InterPro:IPR001150,InterPro:IPR004184,InterPro:IPR005949,UniProtKB%2FTrEMBL:Q0WH32,Genbank:YP_002346406.1,GeneID:1174224;gbkey=CDS;gene=pfl;product=formate acetyltransferase 1;protein_id=YP_002346406.1;transl_table=11
NC_003143.1	RefSeq	region	1558124	1558150	.	-	.	ID=id951;Note=PS00850 Glycine radical signature.;Dbxref=GeneID:1174224;gbkey=misc_feature;gene=pfl
NC_003143.1	RefSeq	gene	1560393	1561250	.	-	.	ID=gene1336;Name=focA;Dbxref=GeneID:1174225;gbkey=Gene;gene=focA;locus_tag=YPO1384
NC_003143.1	RefSeq	CDS	1560393	1561250	.	-	0	ID=cds1276;Name=YP_002346407.1;Parent=gene1336;Dbxref=InterPro:IPR000292,UniProtKB%2FTrEMBL:Q7CHJ2,Genbank:YP_002346407.1,GeneID:1174225;gbkey=CDS;gene=focA;product=formate transporter;protein_id=YP_002346407.1;transl_table=11
NC_003143.1	RefSeq	region	1560717	1560749	.	-	.	ID=id952;Note=PS01006 Formate and nitrite transporters signature 2.;Dbxref=GeneID:1174225;gbkey=misc_feature;gene=focA
NC_003143.1	RefSeq	region	1560975	1561004	.	-	.	ID=id953;Note=PS01005 Formate and nitrite transporters signature 1.;Dbxref=GeneID:1174225;gbkey=misc_feature;gene=focA
NC_003143.1	RefSeq	gene	1561947	1563713	.	-	.	ID=gene1337;Name=YPO1385;Dbxref=GeneID:1174226;gbkey=Gene;locus_tag=YPO1385
NC_003143.1	RefSeq	CDS	1561947	1563713	.	-	0	ID=cds1277;Name=YP_002346408.1;Parent=gene1337;Dbxref=InterPro:IPR003776,UniProtKB%2FTrEMBL:Q0WH30,Genbank:YP_002346408.1,GeneID:1174226;gbkey=CDS;product=hypothetical protein;protein_id=YP_002346408.1;transl_table=11
NC_003143.1	RefSeq	gene	1563862	1564899	.	+	.	ID=gene1338;Name=ansB;Dbxref=GeneID:1174227;gbkey=Gene;gene=ansB;locus_tag=YPO1386
NC_003143.1	RefSeq	CDS	1563862	1564899	.	+	0	ID=cds1278;Name=YP_002346409.1;Parent=gene1338;Note=catalyzes the formation of aspartate from asparagine%2C periplasmic%3B regulated by cyclic AMP receptor protein %28CRP%29 and also induced by anaerobiosis;Dbxref=InterPro:IPR004550,InterPro:IPR006034,UniProtKB%2FTrEMBL:Q7CHJ3,Genbank:YP_002346409.1,GeneID:1174227;gbkey=CDS;gene=ansB;product=L-asparaginase II;protein_id=YP_002346409.1;transl_table=11
NC_003143.1	RefSeq	region	1563943	1563969	.	+	.	ID=id954;Note=PS00144 Asparaginase %2F glutaminase active site signature 1.;Dbxref=GeneID:1174227;gbkey=misc_feature;gene=ansB
NC_003143.1	RefSeq	region	1564171	1564203	.	+	.	ID=id955;Note=PS00917 Asparaginase %2F glutaminase active site signature 2.;Dbxref=GeneID:1174227;gbkey=misc_feature;gene=ansB
NC_003143.1	RefSeq	gene	1565168	1566262	.	+	.	ID=gene1339;Name=YPO1387;Dbxref=GeneID:1174228;gbkey=Gene;locus_tag=YPO1387
NC_003143.1	RefSeq	CDS	1565168	1566262	.	+	0	ID=cds1279;Name=YP_002346410.1;Parent=gene1339;Dbxref=InterPro:IPR008126,InterPro:IPR008635,UniProtKB%2FTrEMBL:Q7CHJ4,Genbank:YP_002346410.1,GeneID:1174228;gbkey=CDS;product=hypothetical protein;protein_id=YP_002346410.1;transl_table=11
NC_003143.1	RefSeq	region	1565576	1565800	.	+	.	ID=id956;Note=5x degenerate repeat: %28K%2FQ%29%28A%2FS%29%28T%2FS%29ET%28L%2FI%29N%28N%2FS%29AN%28I%2FT%2FS%29Y%28T%2FV%29D%28N%2FS%29;Dbxref=GeneID:1174228;gbkey=misc_feature
NC_003143.1	RefSeq	gene	1566262	1568130	.	+	.	ID=gene1340;Name=YPO1388;Dbxref=GeneID:1174229;gbkey=Gene;locus_tag=YPO1388
NC_003143.1	RefSeq	CDS	1566262	1568130	.	+	0	ID=cds1280;Name=YP_002346411.1;Parent=gene1340;Dbxref=UniProtKB%2FTrEMBL:Q7CHJ5,Genbank:YP_002346411.1,GeneID:1174229;gbkey=CDS;product=hypothetical protein;protein_id=YP_002346411.1;transl_table=11
NC_003143.1	RefSeq	gene	1568497	1569582	.	+	.	ID=gene1341;Name=serC;Dbxref=GeneID:1174230;gbkey=Gene;gene=serC;locus_tag=YPO1389
NC_003143.1	RefSeq	CDS	1568497	1569582	.	+	0	ID=cds1281;Name=YP_002346412.1;Parent=gene1341;Note=catalyzes the formation of 3-phosphonooxypyruvate and glutamate from O-phospho-L-serine and 2-oxoglutarate%3B required both in major phosphorylated pathway of serine biosynthesis and in the biosynthesis of pyridoxine;Dbxref=InterPro:IPR000192,InterPro:IPR003248,UniProtKB%2FTrEMBL:Q0WH26,Genbank:YP_002346412.1,GeneID:1174230;gbkey=CDS;gene=serC;product=phosphoserine aminotransferase;protein_id=YP_002346412.1;transl_table=11
NC_003143.1	RefSeq	region	1569058	1569117	.	+	.	ID=id957;Note=PS00595 Aminotransferases class-V pyridoxal-phosphate attachment site.;Dbxref=GeneID:1174230;gbkey=misc_feature;gene=serC
NC_003143.1	RefSeq	gene	1569745	1571031	.	+	.	ID=gene1342;Name=aroA;Dbxref=GeneID:1174231;gbkey=Gene;gene=aroA;locus_tag=YPO1390
NC_003143.1	RefSeq	CDS	1569745	1571031	.	+	0	ID=cds1282;Name=YP_002346413.1;Parent=gene1342;Note=catalyzes the formation of 5-O-%281-carboxyvinyl%29-3-phosphoshikimate from phosphoenolpyruvate and 3-phosphoshikimate in tryptophan biosynthesis;Dbxref=InterPro:IPR001986,InterPro:IPR006264,InterPro:IPR013792,UniProtKB%2FTrEMBL:Q0WH25,Genbank:YP_002346413.1,GeneID:1174231;gbkey=CDS;gene=aroA;product=3-phosphoshikimate 1-carboxyvinyltransferase;protein_id=YP_002346413.1;transl_table=11
NC_003143.1	RefSeq	region	1570015	1570059	.	+	.	ID=id958;Note=PS00104 EPSP synthase signature 1.;Dbxref=GeneID:1174231;gbkey=misc_feature;gene=aroA
NC_003143.1	RefSeq	region	1570759	1570815	.	+	.	ID=id959;Note=PS00885 EPSP synthase signature 2.;Dbxref=GeneID:1174231;gbkey=misc_feature;gene=aroA
NC_003143.1	RefSeq	ribosome_entry_site	1571331	1571337	.	+	.	ID=id960;gbkey=RBS
NC_003143.1	RefSeq	gene	1571344	1572036	.	+	.	ID=gene1343;Name=cmk;Dbxref=GeneID:1174232;gbkey=Gene;gene=cmk;gene_synonym=mssA;locus_tag=YPO1391
NC_003143.1	RefSeq	CDS	1571344	1572036	.	+	0	ID=cds1283;Name=YP_002346414.1;Parent=gene1343;Note=Catalyzes the formation of %28d%29CDP from ATP and %28d%29CMP;Dbxref=InterPro:IPR003136,InterPro:IPR011769,InterPro:IPR011994,UniProtKB%2FTrEMBL:Q0WH24,Genbank:YP_002346414.1,GeneID:1174232;gbkey=CDS;gene=cmk;product=cytidylate kinase;protein_id=YP_002346414.1;transl_table=11
NC_003143.1	RefSeq	gene	1572210	1573883	.	+	.	ID=gene1344;Name=rpsA;Dbxref=GeneID:1174233;gbkey=Gene;gene=rpsA;gene_synonym=ssyF;locus_tag=YPO1392
NC_003143.1	RefSeq	CDS	1572210	1573883	.	+	0	ID=cds1284;Name=YP_002346415.1;Parent=gene1344;Note=in Escherichia coli this protein is involved in binding to the leader sequence of mRNAs and is itself bound to the 30S subunit%3B autoregulates expression via a C-terminal domain%3B in most gram negative organisms this protein is composed of 6 repeats of the S1 domain while in gram positive there are 4 repeats%3B the S1 nucleic acid-binding domain is found associated with other proteins;Dbxref=InterPro:IPR000110,InterPro:IPR003029,InterPro:IPR008994,InterPro:IPR012340,UniProtKB%2FTrEMBL:Q7CHJ6,Genbank:YP_002346415.1,GeneID:1174233;gbkey=CDS;gene=rpsA;product=30S ribosomal protein S1;protein_id=YP_002346415.1;transl_table=11
NC_003143.1	RefSeq	gene	1573944	1574228	.	+	.	ID=gene1345;Name=ihfB;Dbxref=GeneID:1174234;gbkey=Gene;gene=ihfB;gene_synonym=hip,ihfB;locus_tag=YPO1393
NC_003143.1	RefSeq	CDS	1573944	1574228	.	+	0	ID=cds1285;Name=YP_002346416.1;Parent=gene1345;Note=This protein is one of the two subunits of integration host factor%2C a specific DNA-binding protein that functions in genetic recombination as well as in transcriptional and translational control;Dbxref=InterPro:IPR000119,InterPro:IPR005685,InterPro:IPR010992,UniProtKB%2FTrEMBL:Q0WH22,Genbank:YP_002346416.1,GeneID:1174234;gbkey=CDS;gene=ihfB;product=integration host factor subunit beta;protein_id=YP_002346416.1;transl_table=11
NC_003143.1	RefSeq	region	1574082	1574141	.	+	.	ID=id961;Note=PS00045 Bacterial histone-like DNA-binding proteins signature.;Dbxref=GeneID:1174234;gbkey=misc_feature;gene=ihfB
NC_003143.1	RefSeq	gene	1574775	1577066	.	+	.	ID=gene1346;Name=YPO1394;Dbxref=GeneID:1174235;gbkey=Gene;locus_tag=YPO1394
NC_003143.1	RefSeq	CDS	1574775	1577066	.	+	0	ID=cds1286;Name=YP_002346417.1;Parent=gene1346;Dbxref=InterPro:IPR001279,InterPro:IPR004477,InterPro:IPR004797,UniProtKB%2FTrEMBL:Q7CHJ7,Genbank:YP_002346417.1,GeneID:1174235;gbkey=CDS;product=hypothetical protein;protein_id=YP_002346417.1;transl_table=11
NC_003143.1	RefSeq	gene	1577102	1578850	.	+	.	ID=gene1347;Name=msbA;Dbxref=GeneID:1174236;gbkey=Gene;gene=msbA;locus_tag=YPO1395
NC_003143.1	RefSeq	CDS	1577102	1578850	.	+	0	ID=cds1287;Name=YP_002346418.1;Parent=gene1347;Note=involved in the transport of lipid A across the inner membrane;Dbxref=InterPro:IPR001140,InterPro:IPR003439,InterPro:IPR003593,InterPro:IPR011527,InterPro:IPR011917,UniProtKB%2FTrEMBL:Q0WH20,Genbank:YP_002346418.1,GeneID:1174236;gbkey=CDS;gene=msbA;product=lipid transporter ATP-binding protein%2Fpermease;protein_id=YP_002346418.1;transl_table=11
NC_003143.1	RefSeq	region	1578227	1578250	.	+	.	ID=id962;Note=PS00017 ATP%2FGTP-binding site motif A %28P-loop%29.;Dbxref=GeneID:1174236;gbkey=misc_feature;gene=msbA
NC_003143.1	RefSeq	region	1578542	1578586	.	+	.	ID=id963;Note=PS00211 ABC transporters family signature.;Dbxref=GeneID:1174236;gbkey=misc_feature;gene=msbA
NC_003143.1	RefSeq	gene	1578847	1579833	.	+	.	ID=gene1348;Name=lpxK;Dbxref=GeneID:1174237;gbkey=Gene;gene=lpxK;locus_tag=YPO1396
NC_003143.1	RefSeq	CDS	1578847	1579833	.	+	0	ID=cds1288;Name=YP_002346419.1;Parent=gene1348;Note=transfers the gamma-phosphate of ATP to the 4%27 position of a tetraacyldisaccharide 1-phosphate intermediate to form tetraacyldisaccharide 1%2C4%27-bis-phosphate;Dbxref=InterPro:IPR003758,UniProtKB%2FTrEMBL:Q0WH19,Genbank:YP_002346419.1,GeneID:1174237;gbkey=CDS;gene=lpxK;product=tetraacyldisaccharide 4%27-kinase;protein_id=YP_002346419.1;transl_table=11
NC_003143.1	RefSeq	region	1578880	1578948	.	+	.	ID=id964;Note=1 probable transmembrane helix predicted;Dbxref=GeneID:1174237;gbkey=misc_feature;gene=lpxK
NC_003143.1	RefSeq	gene	1579841	1581277	.	-	.	ID=gene1349;Name=YPO1397;Dbxref=GeneID:1174238;gbkey=Gene;locus_tag=YPO1397
NC_003143.1	RefSeq	CDS	1579841	1581277	.	-	0	ID=cds1289;Name=YP_002346420.1;Parent=gene1349;Dbxref=InterPro:IPR009770,UniProtKB%2FTrEMBL:Q7CHJ9,Genbank:YP_002346420.1,GeneID:1174238;gbkey=CDS;product=hypothetical protein;protein_id=YP_002346420.1;transl_table=11
NC_003143.1	RefSeq	repeat_region	1580111	1580155	.	-	.	ID=id965;Note=5x degenerate repeat: IQE;Dbxref=GeneID:1174238;gbkey=repeat_region
NC_003143.1	RefSeq	gene	1581996	1582205	.	+	.	ID=gene1350;Name=cspB;Dbxref=GeneID:1174239;gbkey=Gene;gene=cspB;locus_tag=YPO1398
NC_003143.1	RefSeq	CDS	1581996	1582205	.	+	0	ID=cds1290;Name=YP_002346421.1;Parent=gene1350;Dbxref=InterPro:IPR002059,InterPro:IPR008994,InterPro:IPR011129,InterPro:IPR012156,InterPro:IPR012340,UniProtKB%2FTrEMBL:Q0WH17,Genbank:YP_002346421.1,GeneID:1174239;gbkey=CDS;gene=cspB;product=cold shock-like protein;protein_id=YP_002346421.1;transl_table=11
NC_003143.1	RefSeq	gene	1582753	1582935	.	+	.	ID=gene1351;Name=YPO1399;Dbxref=GeneID:1174240;gbkey=Gene;locus_tag=YPO1399
NC_003143.1	RefSeq	CDS	1582753	1582935	.	+	0	ID=cds1291;Name=YP_002346422.1;Parent=gene1351;Dbxref=InterPro:IPR005651,UniProtKB%2FTrEMBL:Q0WH16,Genbank:YP_002346422.1,GeneID:1174240;gbkey=CDS;product=hypothetical protein;protein_id=YP_002346422.1;transl_table=11
NC_003143.1	RefSeq	gene	1582932	1583684	.	+	.	ID=gene1352;Name=kdsB;Dbxref=GeneID:1174241;gbkey=Gene;gene=kdsB;locus_tag=YPO1400
NC_003143.1	RefSeq	CDS	1582932	1583684	.	+	0	ID=cds1292;Name=YP_002346423.1;Parent=gene1352;Note=CMP-2-keto-3-deoxyoctulosonic acid synthetase%3B catalyzes the formation of CMP-3-deoxy-D-manno-octulosonate from CTP and 3-deoxy-D-manno-octulosonate which is incorporated into LPS;Dbxref=InterPro:IPR003329,InterPro:IPR004528,UniProtKB%2FTrEMBL:Q0WH15,Genbank:YP_002346423.1,GeneID:1174241;gbkey=CDS;gene=kdsB;product=3-deoxy-manno-octulosonate cytidylyltransferase;protein_id=YP_002346423.1;transl_table=11
NC_003143.1	RefSeq	gene	1584047	1584940	.	+	.	ID=gene1353;Name=YPO1401;Dbxref=GeneID:1174242;gbkey=Gene;locus_tag=YPO1401
NC_003143.1	RefSeq	CDS	1584047	1584940	.	+	0	ID=cds1293;Name=YP_002346424.1;Parent=gene1353;Dbxref=InterPro:IPR011009,UniProtKB%2FTrEMBL:Q0WH14,Genbank:YP_002346424.1,GeneID:1174242;gbkey=CDS;product=hypothetical protein;protein_id=YP_002346424.1;transl_table=11
NC_003143.1	RefSeq	gene	1585713	1586498	.	+	.	ID=gene1354;Name=smtA;Dbxref=GeneID:1174243;gbkey=Gene;gene=smtA;locus_tag=YPO1402
NC_003143.1	RefSeq	CDS	1585713	1586498	.	+	0	ID=cds1294;Name=YP_002346425.1;Parent=gene1354;Note=involved in cellular zinc and cadmium homeostasis by binding excess metal ions to its cysteine sulfurs and histidine nitrogens%3B expression of smtA in cyanobacteria is repressed by SmtB at low concentrations of zinc%3B NO elicits release of Zn ions from SmtA;Dbxref=InterPro:IPR013216,UniProtKB%2FTrEMBL:Q0WH13,Genbank:YP_002346425.1,GeneID:1174243;gbkey=CDS;gene=smtA;product=metallothionein SmtA;protein_id=YP_002346425.1;transl_table=11
NC_003143.1	RefSeq	region	1586235	1586300	.	+	.	ID=id966;Note=Predicted helix-turn-helix motif with score 1181 %28%2B3.21 SD%29 at aa 177-198%2C sequence RRQRSLSPQYPLDPPTVYGWLE;Dbxref=GeneID:1174243;gbkey=misc_feature;gene=smtA
NC_003143.1	RefSeq	region	1586307	1586330	.	+	.	ID=id967;Note=PS00017 ATP%2FGTP-binding site motif A %28P-loop%29.;Dbxref=GeneID:1174243;gbkey=misc_feature;gene=smtA
NC_003143.1	RefSeq	gene	1586495	1587817	.	+	.	ID=gene1355;Name=mukF;Dbxref=GeneID:1174244;gbkey=Gene;gene=mukF;locus_tag=YPO1403
NC_003143.1	RefSeq	CDS	1586495	1587817	.	+	0	ID=cds1295;Name=YP_002346426.1;Parent=gene1355;Note=acts with MukB and MukE to condense the chromosome and allow for segregation during cell division;Dbxref=InterPro:IPR005582,InterPro:IPR010916,UniProtKB%2FTrEMBL:Q0WH12,Genbank:YP_002346426.1,GeneID:1174244;gbkey=CDS;gene=mukF;product=condesin subunit F;protein_id=YP_002346426.1;transl_table=11
NC_003143.1	RefSeq	region	1586495	1586719	.	+	.	ID=id968;Note=PS00430 TonB-dependent receptor proteins signature 1.;Dbxref=GeneID:1174244;gbkey=misc_feature;gene=mukF
NC_003143.1	RefSeq	gene	1587825	1588526	.	+	.	ID=gene1356;Name=mukE;Dbxref=GeneID:1174245;gbkey=Gene;gene=mukE;locus_tag=YPO1404
NC_003143.1	RefSeq	CDS	1587825	1588526	.	+	0	ID=cds1296;Name=YP_002346427.1;Parent=gene1356;Note=acts with MukB and MukF to condense the chromosome and allow for segregation during cell division;Dbxref=InterPro:IPR007385,UniProtKB%2FTrEMBL:Q0WH11,Genbank:YP_002346427.1,GeneID:1174245;gbkey=CDS;gene=mukE;product=condesin subunit E;protein_id=YP_002346427.1;transl_table=11
NC_003143.1	RefSeq	gene	1588523	1592980	.	+	.	ID=gene1357;Name=mukB;Dbxref=GeneID:1174246;gbkey=Gene;gene=mukB;locus_tag=YPO1405
NC_003143.1	RefSeq	CDS	1588523	1592980	.	+	0	ID=cds1297;Name=YP_002346428.1;Parent=gene1357;Note=SMC %28structural maintenance of chromosomes%29 family of proteins%3B involved in chromosome condensatin and partitioning%3B forms a homodimer and the C-terminal is essential for DNA-binding activity while the purified N-terminal domain binds FtsZ%3B mutations result in cell division defects;Dbxref=InterPro:IPR007406,InterPro:IPR012090,UniProtKB%2FTrEMBL:Q0WH10,Genbank:YP_002346428.1,GeneID:1174246;gbkey=CDS;gene=mukB;product=cell division protein MukB;protein_id=YP_002346428.1;transl_table=11
NC_003143.1	RefSeq	region	1588622	1588645	.	+	.	ID=id969;Note=PS00017 ATP%2FGTP-binding site motif A %28P-loop%29.;Dbxref=GeneID:1174246;gbkey=misc_feature;gene=mukB
NC_003143.1	RefSeq	repeat_region	1593051	1593762	.	+	.	ID=id970;Note=Contains a %27A%27 at nucleotide position 315%7EIS200-like insertion sequence:IS1541;gbkey=repeat_region
NC_003143.1	RefSeq	gene	1593196	1593654	.	+	.	ID=gene1358;Name=tnp;Dbxref=GeneID:1174247;gbkey=Gene;gene=tnp;locus_tag=YPO1406
NC_003143.1	RefSeq	CDS	1593196	1593654	.	+	0	ID=cds1298;Name=YP_002346429.1;Parent=gene1358;Dbxref=InterPro:IPR002686,UniProtKB%2FTrEMBL:Q56938,Genbank:YP_002346429.1,GeneID:1174247;gbkey=CDS;gene=tnp;product=transposase for the IS1541 insertion element;protein_id=YP_002346429.1;transl_table=11
NC_003143.1	RefSeq	gene	1593938	1595794	.	+	.	ID=gene1359;Name=YPO1407;Dbxref=GeneID:1174248;gbkey=Gene;locus_tag=YPO1407
NC_003143.1	RefSeq	CDS	1593938	1595794	.	+	0	ID=cds1299;Name=YP_002346430.1;Parent=gene1359;Dbxref=InterPro:IPR002052,InterPro:IPR002477,InterPro:IPR009070,UniProtKB%2FTrEMBL:Q7CHK1,Genbank:YP_002346430.1,GeneID:1174248;gbkey=CDS;product=hypothetical protein;protein_id=YP_002346430.1;transl_table=11
NC_003143.1	RefSeq	region	1595198	1595218	.	+	.	ID=id971;Note=PS00092 N-6 Adenine-specific DNA methylases signature.;Dbxref=GeneID:1174248;gbkey=misc_feature
NC_003143.1	RefSeq	gene	1596018	1596566	.	+	.	ID=gene1360;Name=YPO1408;Dbxref=GeneID:1174249;gbkey=Gene;locus_tag=YPO1408
NC_003143.1	RefSeq	CDS	1596018	1596566	.	+	0	ID=cds1300;Name=YP_002346431.1;Parent=gene1360;Dbxref=InterPro:IPR009045,InterPro:IPR010275,UniProtKB%2FTrEMBL:Q7CHK2,Genbank:YP_002346431.1,GeneID:1174249;gbkey=CDS;product=hypothetical protein;protein_id=YP_002346431.1;transl_table=11
NC_003143.1	RefSeq	ribosome_entry_site	1596619	1596622	.	+	.	ID=id972;gbkey=RBS
NC_003143.1	RefSeq	gene	1596627	1597274	.	+	.	ID=gene1361;Name=YPO1409;Dbxref=GeneID:1174250;gbkey=Gene;locus_tag=YPO1409
NC_003143.1	RefSeq	CDS	1596627	1597274	.	+	0	ID=cds1301;Name=YP_002346432.1;Parent=gene1361;Dbxref=InterPro:IPR001279,UniProtKB%2FTrEMBL:Q7CHK3,Genbank:YP_002346432.1,GeneID:1174250;gbkey=CDS;product=metallo-beta-lactamase superfamily protein;protein_id=YP_002346432.1;transl_table=11
NC_003143.1	RefSeq	gene	1597698	1598888	.	-	.	ID=gene1362;Name=aspC;Dbxref=GeneID:1174251;gbkey=Gene;gene=aspC;locus_tag=YPO1410
NC_003143.1	RefSeq	CDS	1597698	1598888	.	-	0	ID=cds1302;Name=YP_002346433.1;Parent=gene1362;Note=catalyzes the formation of L-glutamate and an aromatic oxo acid from an aromatic amino acid and 2-oxoglutarate;Dbxref=InterPro:IPR000796,InterPro:IPR004838,InterPro:IPR004839,UniProtKB%2FTrEMBL:Q0WH05,Genbank:YP_002346433.1,GeneID:1174251;gbkey=CDS;gene=aspC;product=aromatic amino acid aminotransferase;protein_id=YP_002346433.1;transl_table=11
NC_003143.1	RefSeq	region	1598121	1598162	.	-	.	ID=id973;Note=PS00105 Aminotransferases class-I pyridoxal-phosphate attachment site.;Dbxref=GeneID:1174251;gbkey=misc_feature;gene=aspC
NC_003143.1	RefSeq	gene	1599145	1600227	.	-	.	ID=gene1363;Name=ompF;Dbxref=GeneID:1174252;gbkey=Gene;gene=ompF;locus_tag=YPO1411
NC_003143.1	RefSeq	CDS	1599145	1600227	.	-	0	ID=cds1303;Name=YP_002346434.1;Parent=gene1363;Dbxref=InterPro:IPR001702,InterPro:IPR001897,InterPro:IPR013793,UniProtKB%2FTrEMBL:Q0WH04,Genbank:YP_002346434.1,GeneID:1174252;gbkey=CDS;gene=ompF;product=porin;protein_id=YP_002346434.1;transl_table=11
NC_003143.1	RefSeq	region	1599244	1599294	.	-	.	ID=id974;Note=PS00576 General diffusion Gram-negative porins signature.;Dbxref=GeneID:1174252;gbkey=misc_feature;gene=ompF
NC_003143.1	RefSeq	five_prime_UTR	1600228	1600321	.	-	.	ID=id975;Note=acknowledging Delihas N.;gbkey=5%27UTR
NC_003143.1	RefSeq	gene	1600525	1601925	.	-	.	ID=gene1364;Name=asnC;Dbxref=GeneID:1174253;gbkey=Gene;gene=asnC;gene_synonym=tss;locus_tag=YPO1412
NC_003143.1	RefSeq	CDS	1600525	1601925	.	-	0	ID=cds1304;Name=YP_002346435.1;Parent=gene1364;Note=catalyzes a two-step reaction%2C first charging an asparagine molecule by linking its carboxyl group to the alpha-phosphate of ATP%2C followed by transfer of the aminoacyl-adenylate to its tRNA;Dbxref=InterPro:IPR002312,InterPro:IPR004364,InterPro:IPR004365,InterPro:IPR004522,InterPro:IPR006195,InterPro:IPR008994,InterPro:IPR012340,UniProtKB%2FTrEMBL:Q0WH03,Genbank:YP_002346435.1,GeneID:1174253;gbkey=CDS;gene=asnC;product=asparaginyl-tRNA synthetase;protein_id=YP_002346435.1;transl_table=11
NC_003143.1	RefSeq	region	1600594	1600623	.	-	.	ID=id976;Note=PS00339 Aminoacyl-transfer RNA synthetases class-II signature 2.;Dbxref=GeneID:1174253;gbkey=misc_feature;gene=asnC
NC_003143.1	RefSeq	region	1601173	1601229	.	-	.	ID=id977;Note=PS00179 Aminoacyl-transfer RNA synthetases class-II signature 1.;Dbxref=GeneID:1174253;gbkey=misc_feature;gene=asnC
NC_003143.1	RefSeq	gene	1602424	1603629	.	-	.	ID=gene1365;Name=pncB;Dbxref=GeneID:1174254;gbkey=Gene;gene=pncB;locus_tag=YPO1413
NC_003143.1	RefSeq	CDS	1602424	1603629	.	-	0	ID=cds1305;Name=YP_002346436.1;Parent=gene1365;Note=catalyzes the formation of nictonate and 5-phospho-alpha-D-ribose 1-diphosphate from nicotinate D-ribonucleotide and diphosphate;Dbxref=InterPro:IPR006406,InterPro:IPR007229,InterPro:IPR008967,UniProtKB%2FTrEMBL:Q0WH02,Genbank:YP_002346436.1,GeneID:1174254;gbkey=CDS;gene=pncB;product=nicotinate phosphoribosyltransferase;protein_id=YP_002346436.1;transl_table=11
NC_003143.1	RefSeq	gene	1604345	1606960	.	+	.	ID=gene1366;Name=pepN;Dbxref=GeneID:1174255;gbkey=Gene;gene=pepN;locus_tag=YPO1414
NC_003143.1	RefSeq	CDS	1604345	1606960	.	+	0	ID=cds1306;Name=YP_002346437.1;Parent=gene1366;Dbxref=InterPro:IPR001930,InterPro:IPR006025,InterPro:IPR012779,UniProtKB%2FTrEMBL:Q7CHK4,Genbank:YP_002346437.1,GeneID:1174255;gbkey=CDS;gene=pepN;product=aminopeptidase;protein_id=YP_002346437.1;transl_table=11
NC_003143.1	RefSeq	region	1605224	1605253	.	+	.	ID=id978;Note=PS00142 Neutral zinc metallopeptidases%2C zinc-binding region signature.;Dbxref=GeneID:1174255;gbkey=misc_feature;gene=pepN
NC_003143.1	RefSeq	gene	1607578	1608588	.	+	.	ID=gene1367;Name=pyrD;Dbxref=GeneID:1174256;gbkey=Gene;gene=pyrD;locus_tag=YPO1415
NC_003143.1	RefSeq	CDS	1607578	1608588	.	+	0	ID=cds1307;Name=YP_002346438.1;Parent=gene1367;Note=catalyzes the conversion of dihydroorotate to orotate in the pyrimidine biosynthesis pathway%3B uses a flavin nucleotide as an essential cofactor%3B class 2 enzymes are monomeric and compared to the class 1 class 2 possess an extended N terminus%2C which plays a role in the membrane association of the enzyme and provides the binding site for the respiratory quinones that serve as physiological electron acceptors;Dbxref=InterPro:IPR001295,InterPro:IPR005719,InterPro:IPR012135,UniProtKB%2FTrEMBL:Q0WH00,Genbank:YP_002346438.1,GeneID:1174256;gbkey=CDS;gene=pyrD;product=dihydroorotate dehydrogenase 2;protein_id=YP_002346438.1;transl_table=11
NC_003143.1	RefSeq	region	1607815	1607874	.	+	.	ID=id979;Note=PS00911 Dihydroorotate dehydrogenase signature 1.;Dbxref=GeneID:1174256;gbkey=misc_feature;gene=pyrD
NC_003143.1	RefSeq	region	1608451	1608513	.	+	.	ID=id980;Note=PS00912 Dihydroorotate dehydrogenase signature 2.;Dbxref=GeneID:1174256;gbkey=misc_feature;gene=pyrD
NC_003143.1	RefSeq	gene	1608771	1609322	.	+	.	ID=gene1368;Name=YPO1416;Dbxref=GeneID:1174257;gbkey=Gene;locus_tag=YPO1416
NC_003143.1	RefSeq	CDS	1608771	1609322	.	+	0	ID=cds1308;Name=YP_002346439.1;Parent=gene1368;Dbxref=InterPro:IPR009809,UniProtKB%2FTrEMBL:Q7CHK5,Genbank:YP_002346439.1,GeneID:1174257;gbkey=CDS;product=hypothetical protein;protein_id=YP_002346439.1;transl_table=11
NC_003143.1	RefSeq	gene	1609348	1610460	.	-	.	ID=gene1369;Name=YPO1417;Dbxref=GeneID:1174258;gbkey=Gene;locus_tag=YPO1417
NC_003143.1	RefSeq	CDS	1609348	1610460	.	-	0	ID=cds1309;Name=YP_002346440.1;Parent=gene1369;Dbxref=InterPro:IPR001041,InterPro:IPR005302,InterPro:IPR005303,InterPro:IPR006058,InterPro:IPR011037,InterPro:IPR012675,UniProtKB%2FTrEMBL:Q7CHK6,Genbank:YP_002346440.1,GeneID:1174258;gbkey=CDS;product=iron-sulfur binding protein;protein_id=YP_002346440.1;transl_table=11
NC_003143.1	RefSeq	region	1609468	1609494	.	-	.	ID=id981;Note=PS00197 2Fe-2S ferredoxins%2C iron-sulfur binding region signature.;Dbxref=GeneID:1174258;gbkey=misc_feature
NC_003143.1	RefSeq	region	1610344	1610373	.	-	.	ID=id982;Note=PS00339 Aminoacyl-transfer RNA synthetases class-II signature 2.;Dbxref=GeneID:1174258;gbkey=misc_feature
NC_003143.1	RefSeq	gene	1610560	1612680	.	+	.	ID=gene1370;Name=rlmL;Dbxref=GeneID:1174259;gbkey=Gene;gene=rlmL;locus_tag=YPO1418
NC_003143.1	RefSeq	CDS	1610560	1612680	.	+	0	ID=cds1310;Name=YP_002346441.1;Parent=gene1370;Note=catalyzes the N2-methyl guanosine modification of the G2445 residue of 23S rRNA;Dbxref=InterPro:IPR000241,InterPro:IPR002052,InterPro:IPR004114,InterPro:IPR004398,UniProtKB%2FTrEMBL:Q7CHK7,Genbank:YP_002346441.1,GeneID:1174259;gbkey=CDS;gene=rlmL;product=23S rRNA m%282%29G2445 methyltransferase;protein_id=YP_002346441.1;transl_table=11
NC_003143.1	RefSeq	region	1611142	1611177	.	+	.	ID=id983;Note=PS01261 Uncharacterized protein family UPF0020 signature.;Dbxref=GeneID:1174259;gbkey=misc_feature;gene=rlmL
NC_003143.1	RefSeq	region	1611475	1611495	.	+	.	ID=id984;Note=PS00092 N-6 Adenine-specific DNA methylases signature.;Dbxref=GeneID:1174259;gbkey=misc_feature;gene=rlmL
NC_003143.1	RefSeq	gene	1612686	1614599	.	+	.	ID=gene1371;Name=uup;Dbxref=GeneID:1174260;gbkey=Gene;gene=uup;locus_tag=YPO1419
NC_003143.1	RefSeq	CDS	1612686	1614599	.	+	0	ID=cds1311;Name=YP_002346442.1;Parent=gene1371;Note=Uup%3B in Escherichia coli this cytoplasmic protein was shown to contain ATPase activity%3B mutations in this gene affect RecA-independent excision of transposons and affects Mu bacteriophage growth;Dbxref=InterPro:IPR003439,InterPro:IPR003593,InterPro:IPR010978,UniProtKB%2FTrEMBL:Q74VU9,Genbank:YP_002346442.1,GeneID:1174260;gbkey=CDS;gene=uup;product=ABC transporter ATPase;protein_id=YP_002346442.1;transl_table=11
NC_003143.1	RefSeq	region	1612791	1612814	.	+	.	ID=id985;Note=PS00017 ATP%2FGTP-binding site motif A %28P-loop%29.;Dbxref=GeneID:1174260;gbkey=misc_feature;gene=uup
NC_003143.1	RefSeq	region	1613154	1613198	.	+	.	ID=id986;Note=PS00211 ABC transporters family signature.;Dbxref=GeneID:1174260;gbkey=misc_feature;gene=uup
NC_003143.1	RefSeq	region	1613739	1613762	.	+	.	ID=id987;Note=PS00017 ATP%2FGTP-binding site motif A %28P-loop%29.;Dbxref=GeneID:1174260;gbkey=misc_feature;gene=uup
NC_003143.1	RefSeq	region	1614006	1614050	.	+	.	ID=id988;Note=PS00211 ABC transporters family signature.;Dbxref=GeneID:1174260;gbkey=misc_feature;gene=uup
NC_003143.1	RefSeq	gene	1614728	1616014	.	+	.	ID=gene1372;Name=pqiA;Dbxref=GeneID:1174261;gbkey=Gene;gene=pqiA;locus_tag=YPO1420
NC_003143.1	RefSeq	CDS	1614728	1616014	.	+	0	ID=cds1312;Name=YP_002346443.1;Parent=gene1372;Dbxref=InterPro:IPR005219,InterPro:IPR007498,UniProtKB%2FTrEMBL:Q7CHK8,Genbank:YP_002346443.1,GeneID:1174261;gbkey=CDS;gene=pqiA;product=paraquat-inducible protein A;protein_id=YP_002346443.1;transl_table=11
NC_003143.1	RefSeq	gene	1616028	1617653	.	+	.	ID=gene1373;Name=pqiB;Dbxref=GeneID:1174262;gbkey=Gene;gene=pqiB;locus_tag=YPO1421
NC_003143.1	RefSeq	CDS	1616028	1617653	.	+	0	ID=cds1313;Name=YP_002346444.1;Parent=gene1373;Dbxref=InterPro:IPR003399,UniProtKB%2FTrEMBL:Q0WGZ4,Genbank:YP_002346444.1,GeneID:1174262;gbkey=CDS;gene=pqiB;product=paraquat-inducible protein B;protein_id=YP_002346444.1;transl_table=11
NC_003143.1	RefSeq	region	1616064	1616123	.	+	.	ID=id989;Note=1 probable transmembrane helix predicted;Dbxref=GeneID:1174262;gbkey=misc_feature;gene=pqiB
NC_003143.1	RefSeq	gene	1617650	1618228	.	+	.	ID=gene1374;Name=pqiB;Dbxref=GeneID:1174263;gbkey=Gene;gene=pqiB;locus_tag=YPO1422
NC_003143.1	RefSeq	CDS	1617650	1618228	.	+	0	ID=cds1314;Name=YP_002346445.1;Parent=gene1374;Dbxref=InterPro:IPR005586,UniProtKB%2FTrEMBL:Q7CHK9,Genbank:YP_002346445.1,GeneID:1174263;gbkey=CDS;product=lipoprotein;protein_id=YP_002346445.1;transl_table=11
NC_003143.1	RefSeq	region	1617665	1617697	.	+	.	ID=id990;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site.;Dbxref=GeneID:1174263;gbkey=misc_feature
NC_003143.1	RefSeq	repeat_region	1617725	1617760	.	+	.	ID=id991;Note=2x degenerate repeat unit: QLPALN;Dbxref=GeneID:1174263;gbkey=repeat_region
NC_003143.1	RefSeq	gene	1618277	1618417	.	+	.	ID=gene1375;Name=YPO1423;Dbxref=GeneID:1174264;gbkey=Gene;locus_tag=YPO1423
NC_003143.1	RefSeq	CDS	1618277	1618417	.	+	0	ID=cds1315;Name=YP_002346446.1;Parent=gene1375;Note=No significant database hits;Dbxref=UniProtKB%2FTrEMBL:Q74VV3,Genbank:YP_002346446.1,GeneID:1174264;gbkey=CDS;product=hypothetical protein;protein_id=YP_002346446.1;transl_table=11
NC_003143.1	RefSeq	gene	1618498	1618665	.	+	.	ID=gene1376;Name=rmf;Dbxref=GeneID:1174265;gbkey=Gene;gene=rmf;locus_tag=YPO1423a
NC_003143.1	RefSeq	CDS	1618498	1618665	.	+	0	ID=cds1316;Name=YP_002346447.1;Parent=gene1376;Dbxref=InterPro:IPR007040,UniProtKB%2FTrEMBL:Q74VV4,Genbank:YP_002346447.1,GeneID:1174265;gbkey=CDS;gene=rmf;product=ribosome modulation factor;protein_id=YP_002346447.1;transl_table=11
NC_003143.1	RefSeq	repeat_region	1618718	1619429	.	+	.	ID=id992;Note=Contains a %27G%27 at nucleotide position 315%7EIS200-like insertion sequence:IS1541;gbkey=repeat_region
NC_003143.1	RefSeq	gene	1618863	1619321	.	+	.	ID=gene1377;Name=tnp;Dbxref=GeneID:1174266;gbkey=Gene;gene=tnp;locus_tag=YPO1424
NC_003143.1	RefSeq	CDS	1618863	1619321	.	+	0	ID=cds1317;Name=YP_002346448.1;Parent=gene1377;Dbxref=InterPro:IPR002686,UniProtKB%2FTrEMBL:Q74YM6,Genbank:YP_002346448.1,GeneID:1174266;gbkey=CDS;gene=tnp;product=transposase for the IS1541 insertion element;protein_id=YP_002346448.1;transl_table=11
NC_003143.1	RefSeq	region	1622372	1622671	.	-	.	ID=id993;Note=CDS is disrupted by the insertion of an IS100 element after codon 100. The full length CDS is similar to Escherichia coli 3-oxoacyl-%5Bacyl-carrier-protein%5D synthase II FabF SW:FABF_ECOLI %28P39435%29 %28412 aa%29 fasta scores: E%28%29: 9.5e-62%2C 46.445%25 id in 422 aa%2C and to Rhizobium meliloti 3-oxoacyl-%5Bacyl-carrier-protein%5D synthase II TR:AAF24182 %28EMBL:AF159244%29 %28421 aa%29 fasta scores: E%28%29: 5.3e-84%2C51.905%25 id in 420 aa%2C and to Pseudomonas aeruginosa 3-oxoacyl-acyl carrier protein synthase II FabF2 TR:Q9I3X1 %28EMBL:AE004567%29 %28422 aa%29 fasta scores: E%28%29: 3.3e-122%2C71.868%25 id in 423 aa;Dbxref=PSEUDO:CAL20078.1;gbkey=misc_feature;part=1%2F2;pseudo=true
NC_003143.1	RefSeq	region	1619438	1620412	.	-	.	ID=id993;Note=CDS is disrupted by the insertion of an IS100 element after codon 100. The full length CDS is similar to Escherichia coli 3-oxoacyl-%5Bacyl-carrier-protein%5D synthase II FabF SW:FABF_ECOLI %28P39435%29 %28412 aa%29 fasta scores: E%28%29: 9.5e-62%2C 46.445%25 id in 422 aa%2C and to Rhizobium meliloti 3-oxoacyl-%5Bacyl-carrier-protein%5D synthase II TR:AAF24182 %28EMBL:AF159244%29 %28421 aa%29 fasta scores: E%28%29: 5.3e-84%2C51.905%25 id in 420 aa%2C and to Pseudomonas aeruginosa 3-oxoacyl-acyl carrier protein synthase II FabF2 TR:Q9I3X1 %28EMBL:AE004567%29 %28422 aa%29 fasta scores: E%28%29: 3.3e-122%2C71.868%25 id in 423 aa;Dbxref=PSEUDO:CAL20078.1;gbkey=misc_feature;part=2%2F2;pseudo=true
NC_003143.1	RefSeq	gene	1619438	1620421	.	-	.	ID=gene1378;Name=YPO1425a;Dbxref=GeneID:16744747;gbkey=Gene;locus_tag=YPO1425a
NC_003143.1	RefSeq	CDS	1619438	1620421	.	-	0	ID=cds1318;Name=YP_008479694.1;Parent=gene1378;Dbxref=Genbank:YP_008479694.1,GeneID:16744747;gbkey=CDS;product=3-oxoacyl-ACP synthase;protein_id=YP_008479694.1;transl_table=11
NC_003143.1	RefSeq	region	1619828	1619908	.	-	.	ID=id994;Note=PS00107 Protein kinases ATP-binding region signature.;Dbxref=GeneID:16744747;gbkey=misc_feature
NC_003143.1	RefSeq	region	1620173	1620223	.	-	.	ID=id995;Note=PS00606 Beta-ketoacyl synthases active site.;Dbxref=GeneID:16744747;gbkey=misc_feature
NC_003143.1	RefSeq	repeat_region	1620416	1622369	.	-	.	ID=id996;Note=insertion sequence:IS100;gbkey=repeat_region
NC_003143.1	RefSeq	repeat_region	1620416	1620443	.	+	.	ID=id997;Note=IS100 inverted repeat;gbkey=repeat_region
NC_003143.1	RefSeq	gene	1620482	1621264	.	-	.	ID=gene1379;Name=YPO1426;Note=ypmt1.57c;Dbxref=GeneID:1174268;gbkey=Gene;locus_tag=YPO1426
NC_003143.1	RefSeq	CDS	1620482	1621264	.	-	0	ID=cds1319;Name=YP_002346449.1;Parent=gene1379;Dbxref=InterPro:IPR001270,InterPro:IPR002611,InterPro:IPR003593,UniProtKB%2FTrEMBL:Q7ARK4,Genbank:YP_002346449.1,GeneID:1174268;gbkey=CDS;product=transposase%2FIS protein;protein_id=YP_002346449.1;transl_table=11
NC_003143.1	RefSeq	region	1620914	1620937	.	-	.	ID=id998;Note=PS00017 ATP%2FGTP-binding site motif A %28P-loop%29.;Dbxref=GeneID:1174268;gbkey=misc_feature
NC_003143.1	RefSeq	gene	1621261	1622283	.	-	.	ID=gene1380;Name=y1093;Dbxref=GeneID:1174269;gbkey=Gene;gene=y1093;gene_synonym=ypmt1;locus_tag=YPO1427
NC_003143.1	RefSeq	CDS	1621261	1622283	.	-	0	ID=cds1320;Name=YP_002346450.1;Parent=gene1380;Dbxref=InterPro:IPR001584,InterPro:IPR006120,InterPro:IPR009057,InterPro:IPR012287,InterPro:IPR012337,UniProtKB%2FTrEMBL:Q7ARN5,Genbank:YP_002346450.1,GeneID:1174269;gbkey=CDS;gene=y1093;product=transposase for insertion sequence IS100;protein_id=YP_002346450.1;transl_table=11
NC_003143.1	RefSeq	region	1622167	1622232	.	-	.	ID=id999;Note=Predicted helix-turn-helix motif with score 2147 %28%2B6.50 SD%29 at aa 18-39%2C sequence MSSRAIARELGISRNTVKRYLQ;Dbxref=GeneID:1174269;gbkey=misc_feature;gene=y1093
NC_003143.1	RefSeq	gene	1622297	1622707	.	-	.	ID=gene1381;Name=YPO1427b;Dbxref=GeneID:16744748;gbkey=Gene;locus_tag=YPO1427b
NC_003143.1	RefSeq	CDS	1622297	1622707	.	-	0	ID=cds1321;Name=YP_008479695.1;Parent=gene1381;Dbxref=Genbank:YP_008479695.1,GeneID:16744748;gbkey=CDS;product=hypothetical protein;protein_id=YP_008479695.1;transl_table=11
NC_003143.1	RefSeq	repeat_region	1622342	1622369	.	-	.	ID=id1000;Note=IS100 inverted repeat;Dbxref=GeneID:16744748;gbkey=repeat_region
NC_003143.1	RefSeq	gene	1623371	1623889	.	-	.	ID=gene1382;Name=fabA;Dbxref=GeneID:1174271;gbkey=Gene;gene=fabA;locus_tag=YPO1430
NC_003143.1	RefSeq	CDS	1623371	1623889	.	-	0	ID=cds1322;Name=YP_002346452.1;Parent=gene1382;Note=catalyzes the dehydration of %283R%29-3-hydroxydecanoyl-ACP to 2%2C3-decenoyl-ACP or 3%2C4-decenoyl-ACP;Dbxref=InterPro:IPR000794,InterPro:IPR010083,InterPro:IPR013114,UniProtKB%2FTrEMBL:Q0WGY6,Genbank:YP_002346452.1,GeneID:1174271;gbkey=CDS;gene=fabA;product=3-hydroxydecanoyl-ACP dehydratase;protein_id=YP_002346452.1;transl_table=11
NC_003143.1	RefSeq	gene	1623958	1625730	.	-	.	ID=gene1383;Name=YPO1431;Dbxref=GeneID:1174272;gbkey=Gene;locus_tag=YPO1431
NC_003143.1	RefSeq	CDS	1623958	1625730	.	-	0	ID=cds1323;Name=YP_002346453.1;Parent=gene1383;Dbxref=InterPro:IPR001984,UniProtKB%2FTrEMBL:Q7CHL3,Genbank:YP_002346453.1,GeneID:1174272;gbkey=CDS;product=Lon protease;protein_id=YP_002346453.1;transl_table=11
NC_003143.1	RefSeq	gene	1625920	1626375	.	+	.	ID=gene1384;Name=YPO1433;Dbxref=GeneID:1174273;gbkey=Gene;locus_tag=YPO1433
NC_003143.1	RefSeq	CDS	1625920	1626375	.	+	0	ID=cds1324;Name=YP_002346454.1;Parent=gene1384;Dbxref=InterPro:IPR009390,InterPro:IPR010985,UniProtKB%2FTrEMBL:Q0WGY4,Genbank:YP_002346454.1,GeneID:1174273;gbkey=CDS;product=hypothetical protein;protein_id=YP_002346454.1;transl_table=11
NC_003143.1	RefSeq	repeat_region	1626436	1627147	.	-	.	ID=id1001;Note=Contains a %27G%27 at nucleotide position 315%7EIS200-like insertion sequence:IS1541;gbkey=repeat_region
NC_003143.1	RefSeq	gene	1626544	1627002	.	-	.	ID=gene1385;Name=tnp;Dbxref=GeneID:1174274;gbkey=Gene;gene=tnp;locus_tag=YPO1434
NC_003143.1	RefSeq	CDS	1626544	1627002	.	-	0	ID=cds1325;Name=YP_002346455.1;Parent=gene1385;Dbxref=InterPro:IPR002686,UniProtKB%2FTrEMBL:Q74YM6,Genbank:YP_002346455.1,GeneID:1174274;gbkey=CDS;gene=tnp;product=transposase for the IS1541 insertion element;protein_id=YP_002346455.1;transl_table=11
NC_003143.1	RefSeq	gene	1627192	1628253	.	-	.	ID=gene1386;Name=ompA;Dbxref=GeneID:1174275;gbkey=Gene;gene=ompA;gene_synonym=tolG,tut;locus_tag=YPO1435
NC_003143.1	RefSeq	CDS	1627192	1628253	.	-	0	ID=cds1326;Name=YP_002346456.1;Parent=gene1386;Note=OmpA is believed to be a porin%2C involved in diffusion of nonspecific small solutes across the outer membrane. It is the most abundant integral protein of the outer membrane of E. coli%2C and it is known to play a role as a phage receptor%2C a mediator of F-factor dependent conjugation%2C and in maintaining the structural shape of the outer membrane%3B 3a%3B II%2A%3B G%3B d;Dbxref=InterPro:IPR000498,InterPro:IPR002368,InterPro:IPR006664,InterPro:IPR006665,InterPro:IPR006690,UniProtKB%2FTrEMBL:Q0WGY2,Genbank:YP_002346456.1,GeneID:1174275;gbkey=CDS;gene=ompA;product=outer membrane protein OmpA;protein_id=YP_002346456.1;transl_table=11
NC_003143.1	RefSeq	gene	1628611	1629117	.	-	.	ID=gene1387;Name=sulA;Dbxref=GeneID:1174276;gbkey=Gene;gene=sulA;locus_tag=YPO1436
NC_003143.1	RefSeq	CDS	1628611	1629117	.	-	0	ID=cds1327;Name=YP_002346457.1;Parent=gene1387;Dbxref=InterPro:IPR004596,UniProtKB%2FTrEMBL:Q7CHL5,Genbank:YP_002346457.1,GeneID:1174276;gbkey=CDS;gene=sulA;product=SOS cell division inhibitor;protein_id=YP_002346457.1;transl_table=11
NC_003143.1	RefSeq	gene	1629346	1629981	.	+	.	ID=gene1388;Name=YPO1437;Dbxref=GeneID:1174277;gbkey=Gene;locus_tag=YPO1437
NC_003143.1	RefSeq	CDS	1629346	1629981	.	+	0	ID=cds1328;Name=YP_002346458.1;Parent=gene1388;Dbxref=InterPro:IPR007076,InterPro:IPR007077,UniProtKB%2FTrEMBL:Q0WGY0,Genbank:YP_002346458.1,GeneID:1174277;gbkey=CDS;product=hypothetical protein;protein_id=YP_002346458.1;transl_table=11
NC_003143.1	RefSeq	gene	1630083	1632221	.	-	.	ID=gene1389;Name=YPO1438;Dbxref=GeneID:1174278;gbkey=Gene;locus_tag=YPO1438
NC_003143.1	RefSeq	CDS	1630083	1632221	.	-	0	ID=cds1329;Name=YP_002346459.1;Parent=gene1389;Dbxref=InterPro:IPR005829,InterPro:IPR010019,InterPro:IPR010020,InterPro:IPR010289,UniProtKB%2FTrEMBL:Q7CHL6,Genbank:YP_002346459.1,GeneID:1174278;gbkey=CDS;product=hypothetical protein;protein_id=YP_002346459.1;transl_table=11
NC_003143.1	RefSeq	region	1630911	1630988	.	-	.	ID=id1002;Note=PS00217 Sugar transport proteins signature 2.;Dbxref=GeneID:1174278;gbkey=misc_feature
NC_003143.1	RefSeq	gene	1632251	1632697	.	-	.	ID=gene1390;Name=YPO1439;Dbxref=GeneID:1174279;gbkey=Gene;locus_tag=YPO1439
NC_003143.1	RefSeq	CDS	1632251	1632697	.	-	0	ID=cds1330;Name=YP_002346460.1;Parent=gene1390;Dbxref=InterPro:IPR005185,UniProtKB%2FTrEMBL:Q7CHL7,Genbank:YP_002346460.1,GeneID:1174279;gbkey=CDS;product=hypothetical protein;protein_id=YP_002346460.1;transl_table=11
NC_003143.1	RefSeq	gene	1632891	1634876	.	+	.	ID=gene1391;Name=helD;Dbxref=GeneID:1174280;gbkey=Gene;gene=helD;locus_tag=YPO1440
NC_003143.1	RefSeq	CDS	1632891	1634876	.	+	0	ID=cds1331;Name=YP_002346461.1;Parent=gene1391;Note=catalyzes the ATP-dependent unwinding of duplex DNA in the 3%27 to 5%27 direction with respect to the bound single strand;Dbxref=InterPro:IPR000212,InterPro:IPR014016,UniProtKB%2FTrEMBL:Q0WGX7,Genbank:YP_002346461.1,GeneID:1174280;gbkey=CDS;gene=helD;product=DNA helicase IV;protein_id=YP_002346461.1;transl_table=11
NC_003143.1	RefSeq	region	1633536	1633559	.	+	.	ID=id1003;Note=PS00017 ATP%2FGTP-binding site motif A %28P-loop%29.;Dbxref=GeneID:1174280;gbkey=misc_feature;gene=helD
NC_003143.1	RefSeq	gene	1634937	1635401	.	-	.	ID=gene1392;Name=mgsA;Dbxref=GeneID:1174281;gbkey=Gene;gene=mgsA;locus_tag=YPO1441
NC_003143.1	RefSeq	CDS	1634937	1635401	.	-	0	ID=cds1332;Name=YP_002346462.1;Parent=gene1392;Note=catalyzes the formation of methylglyoxal from glycerone phosphate;Dbxref=InterPro:IPR004363,InterPro:IPR011607,UniProtKB%2FTrEMBL:Q0WGX6,Genbank:YP_002346462.1,GeneID:1174281;gbkey=CDS;gene=mgsA;product=methylglyoxal synthase;protein_id=YP_002346462.1;transl_table=11
NC_003143.1	RefSeq	gene	1635580	1636260	.	-	.	ID=gene1393;Name=YPO1442;Dbxref=GeneID:1174282;gbkey=Gene;locus_tag=YPO1442
NC_003143.1	RefSeq	CDS	1635580	1636260	.	-	0	ID=cds1333;Name=YP_002346463.1;Parent=gene1393;Dbxref=UniProtKB%2FTrEMBL:Q0WGX5,Genbank:YP_002346463.1,GeneID:1174282;gbkey=CDS;product=hypothetical protein;protein_id=YP_002346463.1;transl_table=11
NC_003143.1	RefSeq	gene	1636576	1636992	.	+	.	ID=gene1394;Name=YPO1443;Dbxref=GeneID:1174283;gbkey=Gene;locus_tag=YPO1443
NC_003143.1	RefSeq	CDS	1636576	1636992	.	+	0	ID=cds1334;Name=YP_002346464.1;Parent=gene1394;Dbxref=InterPro:IPR003781,UniProtKB%2FTrEMBL:Q7CHL9,Genbank:YP_002346464.1,GeneID:1174283;gbkey=CDS;product=hypothetical protein;protein_id=YP_002346464.1;transl_table=11
NC_003143.1	RefSeq	gene	1637101	1637442	.	-	.	ID=gene1395;Name=YPO1444;Dbxref=GeneID:1174284;gbkey=Gene;locus_tag=YPO1444
NC_003143.1	RefSeq	CDS	1637101	1637442	.	-	0	ID=cds1335;Name=YP_002346465.1;Parent=gene1395;Dbxref=InterPro:IPR011722,UniProtKB%2FTrEMBL:Q7CHM0,Genbank:YP_002346465.1,GeneID:1174284;gbkey=CDS;product=heat shock protein HspQ;protein_id=YP_002346465.1;transl_table=11
NC_003143.1	RefSeq	gene	1637479	1638669	.	-	.	ID=gene1396;Name=YPO1445;Dbxref=GeneID:1174285;gbkey=Gene;locus_tag=YPO1445
NC_003143.1	RefSeq	CDS	1637479	1638669	.	-	0	ID=cds1336;Name=YP_002346466.1;Parent=gene1396;Dbxref=InterPro:IPR002478,UniProtKB%2FTrEMBL:Q7CHM1,Genbank:YP_002346466.1,GeneID:1174285;gbkey=CDS;product=hypothetical protein;protein_id=YP_002346466.1;transl_table=11
NC_003143.1	RefSeq	gene	1638763	1639041	.	+	.	ID=gene1397;Name=YPO1446;Dbxref=GeneID:1174286;gbkey=Gene;locus_tag=YPO1446
NC_003143.1	RefSeq	CDS	1638763	1639041	.	+	0	ID=cds1337;Name=YP_002346467.1;Parent=gene1397;Note=catalyzes the hydrolysis of acylphosphate;Dbxref=InterPro:IPR001792,UniProtKB%2FTrEMBL:Q0WGX1,Genbank:YP_002346467.1,GeneID:1174286;gbkey=CDS;product=acylphosphatase;protein_id=YP_002346467.1;transl_table=11
NC_003143.1	RefSeq	region	1638790	1638822	.	+	.	ID=id1004;Note=PS00150 Acylphosphatase signature 1.;Dbxref=GeneID:1174286;gbkey=misc_feature
NC_003143.1	RefSeq	region	1638862	1638912	.	+	.	ID=id1005;Note=PS00151 Acylphosphatase signature 2.;Dbxref=GeneID:1174286;gbkey=misc_feature
NC_003143.1	RefSeq	gene	1639093	1639419	.	-	.	ID=gene1398;Name=YPO1447;Dbxref=GeneID:1174287;gbkey=Gene;locus_tag=YPO1447
NC_003143.1	RefSeq	CDS	1639093	1639419	.	-	0	ID=cds1338;Name=YP_002346468.1;Parent=gene1398;Dbxref=InterPro:IPR007453,UniProtKB%2FTrEMBL:Q0WGX0,Genbank:YP_002346468.1,GeneID:1174287;gbkey=CDS;product=sulfite reductase subunit protein;protein_id=YP_002346468.1;transl_table=11
NC_003143.1	RefSeq	gene	1639663	1639750	.	+	.	ID=gene1399;Name=YPt_19;Dbxref=GeneID:1174288;gbkey=Gene;locus_tag=YPt_19
NC_003143.1	RefSeq	tRNA	1639663	1639750	.	+	.	ID=rna30;Parent=gene1399;Note=tRNA Ser anticodon TGA%2C Cove score 74.25;Dbxref=GeneID:1174288;gbkey=tRNA;product=tRNA-Ser
NC_003143.1	RefSeq	exon	1639663	1639750	.	+	.	ID=id1006;Parent=rna30;Note=tRNA Ser anticodon TGA%2C Cove score 74.25;Dbxref=GeneID:1174288;gbkey=tRNA;product=tRNA-Ser
NC_003143.1	RefSeq	gene	1640152	1640457	.	+	.	ID=gene1400;Name=YPO1450a;Dbxref=GeneID:16744749;gbkey=Gene;locus_tag=YPO1450a
NC_003143.1	RefSeq	CDS	1640152	1640457	.	+	0	ID=cds1339;Name=YP_008479696.1;Parent=gene1400;Dbxref=Genbank:YP_008479696.1,GeneID:16744749;gbkey=CDS;product=hypothetical protein;protein_id=YP_008479696.1;transl_table=11
NC_003143.1	RefSeq	gene	1640821	1641183	.	+	.	ID=gene1401;Name=YPO1450b;Dbxref=GeneID:16744750;gbkey=Gene;locus_tag=YPO1450b
NC_003143.1	RefSeq	CDS	1640821	1641183	.	+	0	ID=cds1340;Name=YP_008479697.1;Parent=gene1401;Dbxref=Genbank:YP_008479697.1,GeneID:16744750;gbkey=CDS;product=hypothetical protein;protein_id=YP_008479697.1;transl_table=11
NC_003143.1	RefSeq	gene	1641190	1641468	.	+	.	ID=gene1402;Name=YPO1450c;Dbxref=GeneID:16744751;gbkey=Gene;locus_tag=YPO1450c
NC_003143.1	RefSeq	CDS	1641190	1641468	.	+	0	ID=cds1341;Name=YP_008479698.1;Parent=gene1402;Dbxref=Genbank:YP_008479698.1,GeneID:16744751;gbkey=CDS;product=hypothetical protein;protein_id=YP_008479698.1;transl_table=11
NC_003143.1	RefSeq	gene	1641453	1642634	.	+	.	ID=gene1403;Name=YPO1450d;Dbxref=GeneID:16744752;gbkey=Gene;locus_tag=YPO1450d
NC_003143.1	RefSeq	CDS	1641453	1642634	.	+	0	ID=cds1342;Name=YP_008479699.1;Parent=gene1403;Dbxref=Genbank:YP_008479699.1,GeneID:16744752;gbkey=CDS;product=hypothetical protein;protein_id=YP_008479699.1;transl_table=11
NC_003143.1	RefSeq	gene	1643068	1645485	.	-	.	ID=gene1404;Name=YPO1451;Dbxref=GeneID:1174291;gbkey=Gene;locus_tag=YPO1451
NC_003143.1	RefSeq	CDS	1643068	1645485	.	-	0	ID=cds1343;Name=YP_002346469.1;Parent=gene1404;Dbxref=InterPro:IPR001202,InterPro:IPR006093,InterPro:IPR006094,UniProtKB%2FTrEMBL:Q0WGW9,Genbank:YP_002346469.1,GeneID:1174291;gbkey=CDS;product=oxidoreductase;protein_id=YP_002346469.1;transl_table=11
NC_003143.1	RefSeq	region	1643812	1643886	.	-	.	ID=id1007;Note=PS01159 WW%2Frsp5%2FWWP domain signature.;Dbxref=GeneID:1174291;gbkey=misc_feature
NC_003143.1	RefSeq	region	1644220	1644321	.	-	.	ID=id1008;Note=PS00862 Oxygen oxidoreductases covalent FAD-binding site.;Dbxref=GeneID:1174291;gbkey=misc_feature
NC_003143.1	RefSeq	gene	1645639	1646385	.	-	.	ID=gene1405;Name=YPO1452;Dbxref=GeneID:1174292;gbkey=Gene;locus_tag=YPO1452
NC_003143.1	RefSeq	CDS	1645639	1646385	.	-	0	ID=cds1344;Name=YP_002346470.1;Parent=gene1405;Dbxref=InterPro:IPR000276,InterPro:IPR002198,InterPro:IPR002347,UniProtKB%2FTrEMBL:Q7CHM2,Genbank:YP_002346470.1,GeneID:1174292;gbkey=CDS;product=short chain dehydrogenase;protein_id=YP_002346470.1;transl_table=11
NC_003143.1	RefSeq	region	1645885	1645971	.	-	.	ID=id1009;Note=PS00061 Short-chain dehydrogenases%2Freductases family signature.;Dbxref=GeneID:1174292;gbkey=misc_feature
NC_003143.1	RefSeq	region	1646146	1646196	.	-	.	ID=id1010;Note=PS00237 G-protein coupled receptors signature.;Dbxref=GeneID:1174292;gbkey=misc_feature
NC_003143.1	RefSeq	gene	1647014	1647334	.	+	.	ID=gene1406;Name=YPO1453;Dbxref=GeneID:1174293;gbkey=Gene;locus_tag=YPO1453
NC_003143.1	RefSeq	CDS	1647014	1647334	.	+	0	ID=cds1345;Name=YP_002346471.1;Parent=gene1406;Note=No significant database hits;Dbxref=UniProtKB%2FTrEMBL:Q7CHM3,Genbank:YP_002346471.1,GeneID:1174293;gbkey=CDS;product=hypothetical protein;protein_id=YP_002346471.1;transl_table=11
NC_003143.1	RefSeq	gene	1647664	1648122	.	+	.	ID=gene1407;Name=YPO1454;Dbxref=GeneID:1174294;gbkey=Gene;locus_tag=YPO1454
NC_003143.1	RefSeq	CDS	1647664	1648122	.	+	0	ID=cds1346;Name=YP_002346472.1;Parent=gene1407;Dbxref=InterPro:IPR013114,UniProtKB%2FTrEMBL:Q0WGW6,Genbank:YP_002346472.1,GeneID:1174294;gbkey=CDS;product=%283R%29-hydroxymyristoyl-ACP dehydratase;protein_id=YP_002346472.1;transl_table=11
NC_003143.1	RefSeq	gene	1648112	1649395	.	+	.	ID=gene1408;Name=YPO1455;Dbxref=GeneID:1174295;gbkey=Gene;locus_tag=YPO1455
NC_003143.1	RefSeq	CDS	1648112	1649395	.	+	0	ID=cds1347;Name=YP_002346473.1;Parent=gene1408;Dbxref=InterPro:IPR000794,UniProtKB%2FTrEMBL:Q7CHM4,Genbank:YP_002346473.1,GeneID:1174295;gbkey=CDS;product=beta-ketoacyl-ACP synthase;protein_id=YP_002346473.1;transl_table=11
NC_003143.1	RefSeq	region	1648994	1649059	.	+	.	ID=id1011;Note=Predicted helix-turn-helix motif with score 1118 %28%2B2.99 SD%29 at aa 295-316%2C sequence RVIQDVLKKCNISPEQVDYVSA;Dbxref=GeneID:1174295;gbkey=misc_feature
NC_003143.1	RefSeq	gene	1649388	1650134	.	+	.	ID=gene1409;Name=YPO1456;Dbxref=GeneID:1174296;gbkey=Gene;locus_tag=YPO1456
NC_003143.1	RefSeq	CDS	1649388	1650134	.	+	0	ID=cds1348;Name=YP_002346474.1;Parent=gene1409;Dbxref=InterPro:IPR002198,InterPro:IPR002347,UniProtKB%2FTrEMBL:Q0WGW4,Genbank:YP_002346474.1,GeneID:1174296;gbkey=CDS;product=3-ketoacyl-ACP reductase;protein_id=YP_002346474.1;transl_table=11
NC_003143.1	RefSeq	region	1649808	1649894	.	+	.	ID=id1012;Note=PS00061 Short-chain dehydrogenases%2Freductases family signature.;Dbxref=GeneID:1174296;gbkey=misc_feature
NC_003143.1	RefSeq	gene	1650150	1651388	.	+	.	ID=gene1410;Name=YPO1457;Dbxref=GeneID:1174297;gbkey=Gene;locus_tag=YPO1457
NC_003143.1	RefSeq	CDS	1650150	1651388	.	+	0	ID=cds1349;Name=YP_002346475.1;Parent=gene1410;Dbxref=InterPro:IPR008260,InterPro:IPR011554,InterPro:IPR013528,InterPro:IPR013746,UniProtKB%2FTrEMBL:Q7CHM5,Genbank:YP_002346475.1,GeneID:1174297;gbkey=CDS;product=hydroxymethylglutaryl-coenzyme A synthase;protein_id=YP_002346475.1;transl_table=11
NC_003143.1	RefSeq	region	1650666	1650689	.	+	.	ID=id1013;Note=PS00017 ATP%2FGTP-binding site motif A %28P-loop%29.;Dbxref=GeneID:1174297;gbkey=misc_feature
NC_003143.1	RefSeq	region	1651083	1651115	.	+	.	ID=id1014;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site.;Dbxref=GeneID:1174297;gbkey=misc_feature
NC_003143.1	RefSeq	gene	1651381	1652100	.	+	.	ID=gene1411;Name=YPO1458;Dbxref=GeneID:1174298;gbkey=Gene;locus_tag=YPO1458
NC_003143.1	RefSeq	CDS	1651381	1652100	.	+	0	ID=cds1350;Name=YP_002346476.1;Parent=gene1411;Dbxref=InterPro:IPR001753,UniProtKB%2FTrEMBL:Q0WGW2,Genbank:YP_002346476.1,GeneID:1174298;gbkey=CDS;product=enoyl-CoA hydratase;protein_id=YP_002346476.1;transl_table=11
NC_003143.1	RefSeq	region	1651726	1651758	.	+	.	ID=id1015;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site.;Dbxref=GeneID:1174298;gbkey=misc_feature
NC_003143.1	RefSeq	gene	1652093	1652854	.	+	.	ID=gene1412;Name=YPO1459;Dbxref=GeneID:1174299;gbkey=Gene;locus_tag=YPO1459
NC_003143.1	RefSeq	CDS	1652093	1652854	.	+	0	ID=cds1351;Name=YP_002346477.1;Parent=gene1412;Note=involved in polyketide production;Dbxref=InterPro:IPR001753,UniProtKB%2FTrEMBL:Q0WGW1,Genbank:YP_002346477.1,GeneID:1174299;gbkey=CDS;product=polyketide biosynthesis enoyl-CoA hydratase;protein_id=YP_002346477.1;transl_table=11
NC_003143.1	RefSeq	region	1652396	1652458	.	+	.	ID=id1016;Note=PS00166 Enoyl-CoA hydratase%2Fisomerase signature.;Dbxref=GeneID:1174299;gbkey=misc_feature
NC_003143.1	RefSeq	gene	1652857	1653645	.	+	.	ID=gene1413;Name=YPO1460;Dbxref=GeneID:1174300;gbkey=Gene;locus_tag=YPO1460
NC_003143.1	RefSeq	CDS	1652857	1653645	.	+	0	ID=cds1352;Name=YP_002346478.1;Parent=gene1413;Dbxref=InterPro:IPR002198,InterPro:IPR002347,UniProtKB%2FTrEMBL:Q7CHM6,Genbank:YP_002346478.1,GeneID:1174300;gbkey=CDS;product=short chain dehydrogenase;protein_id=YP_002346478.1;transl_table=11
NC_003143.1	RefSeq	gene	1653684	1654172	.	+	.	ID=gene1414;Name=YPO1461;Dbxref=GeneID:1174301;gbkey=Gene;locus_tag=YPO1461
NC_003143.1	RefSeq	CDS	1653684	1654172	.	+	0	ID=cds1353;Name=YP_002346479.1;Parent=gene1414;Dbxref=UniProtKB%2FTrEMBL:Q7CHM7,Genbank:YP_002346479.1,GeneID:1174301;gbkey=CDS;product=hypothetical protein;protein_id=YP_002346479.1;transl_table=11
NC_003143.1	RefSeq	gene	1654210	1654458	.	+	.	ID=gene1415;Name=YPO1462;Dbxref=GeneID:1174302;gbkey=Gene;locus_tag=YPO1462
NC_003143.1	RefSeq	CDS	1654210	1654458	.	+	0	ID=cds1354;Name=YP_002346480.1;Parent=gene1415;Dbxref=InterPro:IPR006163,InterPro:IPR009081,UniProtKB%2FTrEMBL:Q74VF6,Genbank:YP_002346480.1,GeneID:1174302;gbkey=CDS;product=acyl carrier protein;protein_id=YP_002346480.1;transl_table=11
NC_003143.1	RefSeq	gene	1654557	1655405	.	+	.	ID=gene1416;Name=YPO1463;Dbxref=GeneID:1174303;gbkey=Gene;locus_tag=YPO1463
NC_003143.1	RefSeq	CDS	1654557	1655405	.	+	0	ID=cds1355;Name=YP_002346481.1;Parent=gene1416;Dbxref=InterPro:IPR001227,UniProtKB%2FTrEMBL:Q7CHM8,Genbank:YP_002346481.1,GeneID:1174303;gbkey=CDS;product=acyl transferase;protein_id=YP_002346481.1;transl_table=11
NC_003143.1	RefSeq	gene	1656394	1656894	.	+	.	ID=gene1417;Name=YPO1465;Dbxref=GeneID:1174305;gbkey=Gene;locus_tag=YPO1465
NC_003143.1	RefSeq	CDS	1656394	1656894	.	+	0	ID=cds1356;Name=YP_002346483.1;Parent=gene1417;Dbxref=InterPro:IPR008312,UniProtKB%2FTrEMBL:Q0WGV5,Genbank:YP_002346483.1,GeneID:1174305;gbkey=CDS;product=hypothetical protein;protein_id=YP_002346483.1;transl_table=11
NC_003143.1	RefSeq	gene	1656937	1658487	.	+	.	ID=gene1418;Name=YPO1466;Dbxref=GeneID:1174306;gbkey=Gene;locus_tag=YPO1466
NC_003143.1	RefSeq	CDS	1656937	1658487	.	+	0	ID=cds1357;Name=YP_002346484.1;Parent=gene1418;Dbxref=InterPro:IPR010269,UniProtKB%2FTrEMBL:Q74QK4,Genbank:YP_002346484.1,GeneID:1174306;gbkey=CDS;product=hypothetical protein;protein_id=YP_002346484.1;transl_table=11
NC_003143.1	RefSeq	gene	1658499	1659851	.	+	.	ID=gene1419;Name=YPO1467;Dbxref=GeneID:1174307;gbkey=Gene;locus_tag=YPO1467
NC_003143.1	RefSeq	CDS	1658499	1659851	.	+	0	ID=cds1358;Name=YP_002346485.1;Parent=gene1419;Dbxref=InterPro:IPR010263,UniProtKB%2FTrEMBL:Q74QK3,Genbank:YP_002346485.1,GeneID:1174307;gbkey=CDS;product=hypothetical protein;protein_id=YP_002346485.1;transl_table=11
NC_003143.1	RefSeq	gene	1659848	1660534	.	+	.	ID=gene1420;Name=YPO1468;Dbxref=GeneID:1174308;gbkey=Gene;locus_tag=YPO1468
NC_003143.1	RefSeq	CDS	1659848	1660534	.	+	0	ID=cds1359;Name=YP_002346486.1;Parent=gene1420;Dbxref=UniProtKB%2FTrEMBL:Q7CHN1,Genbank:YP_002346486.1,GeneID:1174308;gbkey=CDS;product=hypothetical protein;protein_id=YP_002346486.1;transl_table=11
NC_003143.1	RefSeq	region	1660424	1660483	.	+	.	ID=id1017;Note=1 probable transmembrane helix predicted;Dbxref=GeneID:1174308;gbkey=misc_feature
NC_003143.1	RefSeq	gene	1660534	1662270	.	+	.	ID=gene1421;Name=YPO1469;Dbxref=GeneID:1174309;gbkey=Gene;locus_tag=YPO1469
NC_003143.1	RefSeq	CDS	1660534	1662270	.	+	0	ID=cds1360;Name=YP_002346487.1;Parent=gene1421;Dbxref=InterPro:IPR006665,UniProtKB%2FTrEMBL:Q74VF0,Genbank:YP_002346487.1,GeneID:1174309;gbkey=CDS;product=hypothetical protein;protein_id=YP_002346487.1;transl_table=11
NC_003143.1	RefSeq	gene	1662274	1662765	.	+	.	ID=gene1422;Name=YPO1470;Dbxref=GeneID:1174310;gbkey=Gene;locus_tag=YPO1470
NC_003143.1	RefSeq	CDS	1662274	1662765	.	+	0	ID=cds1361;Name=YP_002346488.1;Parent=gene1422;Dbxref=InterPro:IPR008514,UniProtKB%2FTrEMBL:Q7CHN3,Genbank:YP_002346488.1,GeneID:1174310;gbkey=CDS;product=hypothetical protein;protein_id=YP_002346488.1;transl_table=11
NC_003143.1	RefSeq	gene	1663153	1665795	.	+	.	ID=gene1423;Name=YPO1471;Dbxref=GeneID:1174311;gbkey=Gene;locus_tag=YPO1471
NC_003143.1	RefSeq	CDS	1663153	1665795	.	+	0	ID=cds1362;Name=YP_002346489.1;Parent=gene1423;Dbxref=InterPro:IPR001270,InterPro:IPR003593,InterPro:IPR003959,InterPro:IPR004176,InterPro:IPR013093,UniProtKB%2FTrEMBL:Q74VE8,Genbank:YP_002346489.1,GeneID:1174311;gbkey=CDS;product=ATPase subunit of ATP-dependent protease;protein_id=YP_002346489.1;transl_table=11
NC_003143.1	RefSeq	region	1663876	1663899	.	+	.	ID=id1018;Note=PS00017 ATP%2FGTP-binding site motif A %28P-loop%29.;Dbxref=GeneID:1174311;gbkey=misc_feature
NC_003143.1	RefSeq	region	1664140	1664178	.	+	.	ID=id1019;Note=PS00870 Chaperonins clpA%2FB signature 1.;Dbxref=GeneID:1174311;gbkey=misc_feature
NC_003143.1	RefSeq	region	1665007	1665030	.	+	.	ID=id1020;Note=PS00017 ATP%2FGTP-binding site motif A %28P-loop%29.;Dbxref=GeneID:1174311;gbkey=misc_feature
NC_003143.1	RefSeq	region	1665628	1665645	.	+	.	ID=id1021;Note=PS00343 Gram-positive cocci surface proteins %27anchoring%27 hexapeptide.;Dbxref=GeneID:1174311;gbkey=misc_feature
NC_003143.1	RefSeq	gene	1665798	1668146	.	+	.	ID=gene1424;Name=YPO1472;Dbxref=GeneID:1174312;gbkey=Gene;locus_tag=YPO1472
NC_003143.1	RefSeq	CDS	1665798	1668146	.	+	0	ID=cds1363;Name=YP_002346490.1;Parent=gene1424;Dbxref=InterPro:IPR006533,UniProtKB%2FTrEMBL:Q74VE7,Genbank:YP_002346490.1,GeneID:1174312;gbkey=CDS;product=hypothetical protein;protein_id=YP_002346490.1;transl_table=11
NC_003143.1	RefSeq	gene	1668162	1670462	.	+	.	ID=gene1425;Name=YPO1473;Dbxref=GeneID:1174313;gbkey=Gene;locus_tag=YPO1473
NC_003143.1	RefSeq	CDS	1668162	1670462	.	+	0	ID=cds1364;Name=YP_002346491.1;Parent=gene1425;Note=No significant database hits. Similar to YPO0966 %2883.2%25 identity in 768 aa overlap%29 and YPO1476 %2851.9%25 identity in 567 aa overlap%29;Dbxref=InterPro:IPR000719,InterPro:IPR002886,InterPro:IPR011055,UniProtKB%2FTrEMBL:Q74VE6,Genbank:YP_002346491.1,GeneID:1174313;gbkey=CDS;product=hypothetical protein;protein_id=YP_002346491.1;transl_table=11
NC_003143.1	RefSeq	region	1668465	1668542	.	+	.	ID=id1022;Note=PS00107 Protein kinases ATP-binding region signature.;Dbxref=GeneID:1174313;gbkey=misc_feature
NC_003143.1	RefSeq	gene	1670459	1671232	.	+	.	ID=gene1426;Name=YPO1474;Dbxref=GeneID:1174314;gbkey=Gene;locus_tag=YPO1474
NC_003143.1	RefSeq	CDS	1670459	1671232	.	+	0	ID=cds1365;Name=YP_002346492.1;Parent=gene1426;Dbxref=UniProtKB%2FTrEMBL:Q7CHN4,Genbank:YP_002346492.1,GeneID:1174314;gbkey=CDS;product=hypothetical protein;protein_id=YP_002346492.1;transl_table=11
NC_003143.1	RefSeq	gene	1671386	1671646	.	+	.	ID=gene1427;Name=YPO1475;Dbxref=GeneID:1174315;gbkey=Gene;locus_tag=YPO1475
NC_003143.1	RefSeq	CDS	1671386	1671646	.	+	0	ID=cds1366;Name=YP_002346493.1;Parent=gene1427;Dbxref=UniProtKB%2FTrEMBL:Q7CHN5,Genbank:YP_002346493.1,GeneID:1174315;gbkey=CDS;product=hypothetical protein;protein_id=YP_002346493.1;transl_table=11
NC_003143.1	RefSeq	gene	1671662	1673845	.	+	.	ID=gene1428;Name=YPO1476;Dbxref=GeneID:1174316;gbkey=Gene;locus_tag=YPO1476
NC_003143.1	RefSeq	CDS	1671662	1673845	.	+	0	ID=cds1367;Name=YP_002346494.1;Parent=gene1428;Dbxref=InterPro:IPR002886,InterPro:IPR011055,UniProtKB%2FTrEMBL:Q74VE3,Genbank:YP_002346494.1,GeneID:1174316;gbkey=CDS;product=hypothetical protein;protein_id=YP_002346494.1;transl_table=11
NC_003143.1	RefSeq	region	1674198	1674221	.	+	.	ID=id1023;Note=PS00017 ATP%2FGTP-binding site motif A %28P-loop%29.;gbkey=misc_feature
NC_003143.1	RefSeq	gene	1675221	1675541	.	-	.	ID=gene1429;Name=YPO1477a;Dbxref=GeneID:16744753;gbkey=Gene;locus_tag=YPO1477a
NC_003143.1	RefSeq	CDS	1675221	1675541	.	-	0	ID=cds1368;Name=YP_008479700.1;Parent=gene1429;Dbxref=Genbank:YP_008479700.1,GeneID:16744753;gbkey=CDS;product=hypothetical protein;protein_id=YP_008479700.1;transl_table=11
NC_003143.1	RefSeq	gene	1676764	1677885	.	+	.	ID=gene1430;Name=YPO1481;Dbxref=GeneID:1174319;gbkey=Gene;locus_tag=YPO1481
NC_003143.1	RefSeq	CDS	1676764	1677885	.	+	0	ID=cds1369;Name=YP_002346496.1;Parent=gene1430;Dbxref=UniProtKB%2FTrEMBL:Q74VE0,Genbank:YP_002346496.1,GeneID:1174319;gbkey=CDS;product=hypothetical protein;protein_id=YP_002346496.1;transl_table=11
NC_003143.1	RefSeq	gene	1677882	1681304	.	+	.	ID=gene1431;Name=YPO1482;Dbxref=GeneID:1174320;gbkey=Gene;locus_tag=YPO1482
NC_003143.1	RefSeq	CDS	1677882	1681304	.	+	0	ID=cds1370;Name=YP_002346497.1;Parent=gene1431;Dbxref=InterPro:IPR000276,InterPro:IPR009612,InterPro:IPR010623,UniProtKB%2FTrEMBL:Q7CHN7,Genbank:YP_002346497.1,GeneID:1174320;gbkey=CDS;product=hypothetical protein;protein_id=YP_002346497.1;transl_table=11
NC_003143.1	RefSeq	region	1679025	1679075	.	+	.	ID=id1024;Note=PS00237 G-protein coupled receptors signature.;Dbxref=GeneID:1174320;gbkey=misc_feature
NC_003143.1	RefSeq	gene	1681348	1682949	.	+	.	ID=gene1432;Name=YPO1483;Dbxref=GeneID:1174321;gbkey=Gene;locus_tag=YPO1483
NC_003143.1	RefSeq	CDS	1681348	1682949	.	+	0	ID=cds1371;Name=YP_002346498.1;Parent=gene1432;Dbxref=InterPro:IPR010657,UniProtKB%2FTrEMBL:Q7CHN8,Genbank:YP_002346498.1,GeneID:1174321;gbkey=CDS;product=hypothetical protein;protein_id=YP_002346498.1;transl_table=11
NC_003143.1	RefSeq	gene	1682940	1684025	.	+	.	ID=gene1433;Name=YPO1484;Dbxref=GeneID:1174322;gbkey=Gene;locus_tag=YPO1484
NC_003143.1	RefSeq	CDS	1682940	1684025	.	+	0	ID=cds1372;Name=YP_002346499.1;Parent=gene1433;Note=No significant database hits. N-terminal region is similar to the N-terminus of YPO0873 %2862.1%25 identity in 124 aa overlap%29;Dbxref=InterPro:IPR008727,UniProtKB%2FTrEMBL:Q74VD8,Genbank:YP_002346499.1,GeneID:1174322;gbkey=CDS;product=hypothetical protein;protein_id=YP_002346499.1;transl_table=11
NC_003143.1	RefSeq	gene	1684025	1684495	.	+	.	ID=gene1434;Name=YPO1484a;Dbxref=GeneID:1174323;gbkey=Gene;locus_tag=YPO1484a
NC_003143.1	RefSeq	CDS	1684025	1684495	.	+	0	ID=cds1373;Name=YP_002346500.1;Parent=gene1434;Note=No significant database hits;Dbxref=UniProtKB%2FTrEMBL:Q7CHN9,Genbank:YP_002346500.1,GeneID:1174323;gbkey=CDS;product=hypothetical protein;protein_id=YP_002346500.1;transl_table=11
NC_003143.1	RefSeq	gene	1684716	1686479	.	+	.	ID=gene1435;Name=YPO1485;Dbxref=GeneID:1174324;gbkey=Gene;locus_tag=YPO1485
NC_003143.1	RefSeq	CDS	1684716	1686479	.	+	0	ID=cds1374;Name=YP_002346501.1;Parent=gene1435;Dbxref=InterPro:IPR010272,UniProtKB%2FTrEMBL:Q7CHP0,Genbank:YP_002346501.1,GeneID:1174324;gbkey=CDS;product=hypothetical protein;protein_id=YP_002346501.1;transl_table=11
NC_003143.1	RefSeq	gene	1686443	1687528	.	+	.	ID=gene1436;Name=YPO1486;Dbxref=GeneID:1174325;gbkey=Gene;locus_tag=YPO1486
NC_003143.1	RefSeq	CDS	1686443	1687528	.	+	0	ID=cds1375;Name=YP_002346502.1;Parent=gene1436;Dbxref=InterPro:IPR010732,UniProtKB%2FTrEMBL:Q7CHP1,Genbank:YP_002346502.1,GeneID:1174325;gbkey=CDS;product=hypothetical protein;protein_id=YP_002346502.1;transl_table=11
NC_003143.1	RefSeq	gene	1687596	1688084	.	+	.	ID=gene1437;Name=YPO1487;Dbxref=GeneID:1174326;gbkey=Gene;locus_tag=YPO1487
NC_003143.1	RefSeq	CDS	1687596	1688084	.	+	0	ID=cds1376;Name=YP_002346503.1;Parent=gene1437;Dbxref=UniProtKB%2FTrEMBL:Q0WGT5,Genbank:YP_002346503.1,GeneID:1174326;gbkey=CDS;product=hypothetical protein;protein_id=YP_002346503.1;transl_table=11
NC_003143.1	RefSeq	gene	1688084	1688536	.	+	.	ID=gene1438;Name=YPO1488;Dbxref=GeneID:1174327;gbkey=Gene;locus_tag=YPO1488
NC_003143.1	RefSeq	CDS	1688084	1688536	.	+	0	ID=cds1377;Name=YP_002346504.1;Parent=gene1438;Dbxref=InterPro:IPR010745,UniProtKB%2FTrEMBL:Q74VD3,Genbank:YP_002346504.1,GeneID:1174327;gbkey=CDS;product=hypothetical protein;protein_id=YP_002346504.1;transl_table=11
NC_003143.1	RefSeq	gene	1688561	1689928	.	+	.	ID=gene1439;Name=YPO1489;Dbxref=GeneID:1174328;gbkey=Gene;locus_tag=YPO1489
NC_003143.1	RefSeq	CDS	1688561	1689928	.	+	0	ID=cds1378;Name=YP_002346505.1;Parent=gene1439;Dbxref=InterPro:IPR010657,InterPro:IPR011992,UniProtKB%2FTrEMBL:Q7CHP2,Genbank:YP_002346505.1,GeneID:1174328;gbkey=CDS;product=hypothetical protein;protein_id=YP_002346505.1;transl_table=11
NC_003143.1	RefSeq	gene	1690140	1690763	.	-	.	ID=gene1440;Name=YPO1490;Dbxref=GeneID:1174329;gbkey=Gene;locus_tag=YPO1490
NC_003143.1	RefSeq	CDS	1690140	1690763	.	-	0	ID=cds1379;Name=YP_002346506.1;Parent=gene1440;Dbxref=UniProtKB%2FTrEMBL:Q7CHP3,Genbank:YP_002346506.1,GeneID:1174329;gbkey=CDS;product=hypothetical protein;protein_id=YP_002346506.1;transl_table=11
NC_003143.1	RefSeq	gene	1691446	1693041	.	+	.	ID=gene1441;Name=ybiT;Dbxref=GeneID:1174330;gbkey=Gene;gene=ybiT;locus_tag=YPO1491
NC_003143.1	RefSeq	CDS	1691446	1693041	.	+	0	ID=cds1380;Name=YP_002346507.1;Parent=gene1441;Dbxref=InterPro:IPR003439,InterPro:IPR003593,UniProtKB%2FTrEMBL:Q0WGT1,Genbank:YP_002346507.1,GeneID:1174330;gbkey=CDS;gene=ybiT;product=ABC transporter ATP-binding protein;protein_id=YP_002346507.1;transl_table=11
NC_003143.1	RefSeq	region	1691545	1691568	.	+	.	ID=id1025;Note=PS00017 ATP%2FGTP-binding site motif A %28P-loop%29.;Dbxref=GeneID:1174330;gbkey=misc_feature;gene=ybiT
NC_003143.1	RefSeq	region	1692499	1692522	.	+	.	ID=id1026;Note=PS00017 ATP%2FGTP-binding site motif A %28P-loop%29.;Dbxref=GeneID:1174330;gbkey=misc_feature;gene=ybiT
NC_003143.1	RefSeq	gene	1693269	1693922	.	+	.	ID=gene1442;Name=YPO1492;Dbxref=GeneID:1174331;gbkey=Gene;locus_tag=YPO1492
NC_003143.1	RefSeq	CDS	1693269	1693922	.	+	0	ID=cds1381;Name=YP_002346508.1;Parent=gene1442;Dbxref=UniProtKB%2FTrEMBL:Q7CHP4,Genbank:YP_002346508.1,GeneID:1174331;gbkey=CDS;product=hypothetical protein;protein_id=YP_002346508.1;transl_table=11
NC_003143.1	RefSeq	repeat_region	1693931	1695245	.	-	.	ID=id1027;Note=insertion sequence:IS285;gbkey=repeat_region
NC_003143.1	RefSeq	repeat_region	1693931	1693959	.	+	.	ID=id1028;Note=IS285 inverted repeat;gbkey=repeat_region
NC_003143.1	RefSeq	gene	1693966	1695174	.	-	.	ID=gene1443;Name=y1062;Dbxref=GeneID:1174332;gbkey=Gene;gene=y1062;locus_tag=YPO1493
NC_003143.1	RefSeq	CDS	1693966	1695174	.	-	0	ID=cds1382;Name=YP_002346509.1;Parent=gene1443;Dbxref=InterPro:IPR001207,UniProtKB%2FTrEMBL:Q7ARB0,Genbank:YP_002346509.1,GeneID:1174332;gbkey=CDS;gene=y1062;product=transposase;protein_id=YP_002346509.1;transl_table=11
NC_003143.1	RefSeq	region	1694407	1694481	.	-	.	ID=id1029;Note=PS01007 Transposases%2C Mutator family%2C signature.;Dbxref=GeneID:1174332;gbkey=misc_feature;gene=y1062
NC_003143.1	RefSeq	repeat_region	1695217	1695245	.	-	.	ID=id1030;Note=IS285 inverted repeat;gbkey=repeat_region
NC_003143.1	RefSeq	gene	1695310	1696077	.	-	.	ID=gene1444;Name=moeB;Dbxref=GeneID:1174333;gbkey=Gene;gene=moeB;locus_tag=YPO1494
NC_003143.1	RefSeq	CDS	1695310	1696077	.	-	0	ID=cds1383;Name=YP_002346510.1;Parent=gene1444;Note=ATP-dependent adenylate transferase%2C transfers adenyl moiety to the MoeD subunit of molybdopterin synthase;Dbxref=InterPro:IPR000594,InterPro:IPR007901,InterPro:IPR009036,InterPro:IPR012730,UniProtKB%2FTrEMBL:Q0WGS8,Genbank:YP_002346510.1,GeneID:1174333;gbkey=CDS;gene=moeB;product=molybdopterin biosynthesis protein MoeB;protein_id=YP_002346510.1;transl_table=11
NC_003143.1	RefSeq	region	1695946	1695978	.	-	.	ID=id1031;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site.;Dbxref=GeneID:1174333;gbkey=misc_feature;gene=moeB
NC_003143.1	RefSeq	gene	1696082	1697356	.	-	.	ID=gene1445;Name=moeA;Dbxref=GeneID:1174334;gbkey=Gene;gene=moeA;gene_synonym=chlE,moeA,narE;locus_tag=YPO1495
NC_003143.1	RefSeq	CDS	1696082	1697356	.	-	0	ID=cds1384;Name=YP_002346511.1;Parent=gene1445;Note=is involved in the formation of active molybdenum cofactor and the chelation of molybdenum;Dbxref=InterPro:IPR001453,InterPro:IPR005110,InterPro:IPR005111,InterPro:IPR008284,InterPro:IPR012088,UniProtKB%2FTrEMBL:Q7CHP6,Genbank:YP_002346511.1,GeneID:1174334;gbkey=CDS;gene=moeA;product=molybdopterin biosynthesis protein MoeA;protein_id=YP_002346511.1;transl_table=11
NC_003143.1	RefSeq	region	1696490	1696591	.	-	.	ID=id1032;Note=PS01079 Molybdenum cofactor biosynthesis proteins signature 2.;Dbxref=GeneID:1174334;gbkey=misc_feature;gene=moeA
NC_003143.1	RefSeq	gene	1697891	1699201	.	-	.	ID=gene1446;Name=YPO1496;Dbxref=GeneID:1174335;gbkey=Gene;locus_tag=YPO1496
NC_003143.1	RefSeq	CDS	1697891	1699201	.	-	0	ID=cds1385;Name=YP_002346512.1;Parent=gene1446;Dbxref=InterPro:IPR001202,InterPro:IPR007197,UniProtKB%2FTrEMBL:Q7CHP7,Genbank:YP_002346512.1,GeneID:1174335;gbkey=CDS;product=heme-binding protein;protein_id=YP_002346512.1;transl_table=11
NC_003143.1	RefSeq	region	1698743	1698823	.	-	.	ID=id1033;Note=PS01159 WW%2Frsp5%2FWWP domain signature.;Dbxref=GeneID:1174335;gbkey=misc_feature
NC_003143.1	RefSeq	region	1698923	1698940	.	-	.	ID=id1034;Note=PS00190 Cytochrome c family heme-binding site signature.;Dbxref=GeneID:1174335;gbkey=misc_feature
NC_003143.1	RefSeq	gene	1699211	1699879	.	-	.	ID=gene1447;Name=YPO1497;Dbxref=GeneID:1174336;gbkey=Gene;locus_tag=YPO1497
NC_003143.1	RefSeq	CDS	1699211	1699879	.	-	0	ID=cds1386;Name=YP_002346513.1;Parent=gene1447;Dbxref=InterPro:IPR003439,InterPro:IPR003593,UniProtKB%2FTrEMBL:Q7CHP8,Genbank:YP_002346513.1,GeneID:1174336;gbkey=CDS;product=ABC transporter ATP-binding protein;protein_id=YP_002346513.1;transl_table=11
NC_003143.1	RefSeq	region	1699412	1699456	.	-	.	ID=id1035;Note=PS00211 ABC transporters family signature.;Dbxref=GeneID:1174336;gbkey=misc_feature
NC_003143.1	RefSeq	region	1699745	1699768	.	-	.	ID=id1036;Note=PS00017 ATP%2FGTP-binding site motif A %28P-loop%29.;Dbxref=GeneID:1174336;gbkey=misc_feature
NC_003143.1	RefSeq	gene	1699881	1701143	.	-	.	ID=gene1448;Name=YPO1498;Dbxref=GeneID:1174337;gbkey=Gene;locus_tag=YPO1498
NC_003143.1	RefSeq	CDS	1699881	1701143	.	-	0	ID=cds1387;Name=YP_002346514.1;Parent=gene1448;Dbxref=InterPro:IPR006143,UniProtKB%2FTrEMBL:Q7CHP9,Genbank:YP_002346514.1,GeneID:1174337;gbkey=CDS;product=hypothetical protein;protein_id=YP_002346514.1;transl_table=11
NC_003143.1	RefSeq	gene	1701145	1703505	.	-	.	ID=gene1449;Name=YPO1499;Dbxref=GeneID:1174338;gbkey=Gene;locus_tag=YPO1499
NC_003143.1	RefSeq	CDS	1701145	1703505	.	-	0	ID=cds1388;Name=YP_002346515.1;Parent=gene1449;Dbxref=UniProtKB%2FTrEMBL:Q74VC2,Genbank:YP_002346515.1,GeneID:1174338;gbkey=CDS;product=hypothetical protein;protein_id=YP_002346515.1;transl_table=11
NC_003143.1	RefSeq	gene	1703589	1703801	.	-	.	ID=gene1450;Name=YPO1500;Dbxref=GeneID:1174339;gbkey=Gene;locus_tag=YPO1500
NC_003143.1	RefSeq	CDS	1703589	1703801	.	-	0	ID=cds1389;Name=YP_002346516.1;Parent=gene1450;Note=No significant database hits;Dbxref=UniProtKB%2FTrEMBL:Q74VC1,Genbank:YP_002346516.1,GeneID:1174339;gbkey=CDS;product=hypothetical protein;protein_id=YP_002346516.1;transl_table=11
NC_003143.1	RefSeq	gene	1704058	1704900	.	-	.	ID=gene1451;Name=YPO1501;Dbxref=GeneID:1174340;gbkey=Gene;locus_tag=YPO1501
NC_003143.1	RefSeq	CDS	1704058	1704900	.	-	0	ID=cds1390;Name=YP_002346517.1;Parent=gene1451;Dbxref=InterPro:IPR000801,UniProtKB%2FTrEMBL:Q7CHQ0,Genbank:YP_002346517.1,GeneID:1174340;gbkey=CDS;product=esterase;protein_id=YP_002346517.1;transl_table=11
NC_003143.1	RefSeq	gene	1704921	1706054	.	-	.	ID=gene1452;Name=YPO1502;Dbxref=GeneID:1174341;gbkey=Gene;locus_tag=YPO1502
NC_003143.1	RefSeq	CDS	1704921	1706054	.	-	0	ID=cds1391;Name=YP_002346518.1;Parent=gene1452;Dbxref=InterPro:IPR002085,InterPro:IPR002328,InterPro:IPR011032,InterPro:IPR013149,InterPro:IPR013154,UniProtKB%2FTrEMBL:Q0WGS0,Genbank:YP_002346518.1,GeneID:1174341;gbkey=CDS;product=alcohol dehydrogenase;protein_id=YP_002346518.1;transl_table=11
NC_003143.1	RefSeq	region	1705419	1705484	.	-	.	ID=id1037;Note=1 probable transmembrane helix predicted;Dbxref=GeneID:1174341;gbkey=misc_feature
NC_003143.1	RefSeq	region	1705827	1705871	.	-	.	ID=id1038;Note=PS00059 Zinc-containing alcohol dehydrogenases signature.;Dbxref=GeneID:1174341;gbkey=misc_feature
NC_003143.1	RefSeq	gene	1706334	1707203	.	-	.	ID=gene1453;Name=YPO1503;Dbxref=GeneID:1174342;gbkey=Gene;locus_tag=YPO1503
NC_003143.1	RefSeq	CDS	1706334	1707203	.	-	0	ID=cds1392;Name=YP_002346519.1;Parent=gene1453;Dbxref=InterPro:IPR000847,InterPro:IPR005119,UniProtKB%2FTrEMBL:Q7CHQ1,Genbank:YP_002346519.1,GeneID:1174342;gbkey=CDS;product=LysR family transcriptional regulator;protein_id=YP_002346519.1;transl_table=11
NC_003143.1	RefSeq	region	1707063	1707155	.	-	.	ID=id1039;Note=PS00044 Bacterial regulatory proteins%2C lysR family signature.;Dbxref=GeneID:1174342;gbkey=misc_feature
NC_003143.1	RefSeq	gene	1707339	1708490	.	+	.	ID=gene1454;Name=YPO1504;Dbxref=GeneID:1174343;gbkey=Gene;locus_tag=YPO1504
NC_003143.1	RefSeq	CDS	1707339	1708490	.	+	0	ID=cds1393;Name=YP_002346520.1;Parent=gene1454;Dbxref=InterPro:IPR010645,UniProtKB%2FTrEMBL:Q7CHQ2,Genbank:YP_002346520.1,GeneID:1174343;gbkey=CDS;product=hypothetical protein;protein_id=YP_002346520.1;transl_table=11
NC_003143.1	RefSeq	gene	1708674	1709336	.	+	.	ID=gene1455;Name=folE;Dbxref=GeneID:1174344;gbkey=Gene;gene=folE;locus_tag=YPO1505
NC_003143.1	RefSeq	CDS	1708674	1709336	.	+	0	ID=cds1394;Name=YP_002346521.1;Parent=gene1455;Note=involved in the first step of tetrahydrofolate biosynthesis%3B catalyzes the formation of formate and 2-amino-4-hydroxy-6-%28erythro-1%2C2%2C3-trihydroxypropyl%29dihydropteridine triphosphate from GTP and water%3B forms a homopolymer;Dbxref=InterPro:IPR001474,UniProtKB%2FTrEMBL:Q0WGR7,Genbank:YP_002346521.1,GeneID:1174344;gbkey=CDS;gene=folE;product=GTP cyclohydrolase I;protein_id=YP_002346521.1;transl_table=11
NC_003143.1	RefSeq	region	1708959	1709009	.	+	.	ID=id1040;Note=PS00859 GTP cyclohydrolase I signature 1.;Dbxref=GeneID:1174344;gbkey=misc_feature;gene=folE
NC_003143.1	RefSeq	region	1709103	1709135	.	+	.	ID=id1041;Note=PS00860 GTP cyclohydrolase I signature 2.;Dbxref=GeneID:1174344;gbkey=misc_feature;gene=folE
NC_003143.1	RefSeq	gene	1709391	1710557	.	+	.	ID=gene1456;Name=yeiB;Dbxref=GeneID:1174345;gbkey=Gene;gene=yeiB;locus_tag=YPO1506
NC_003143.1	RefSeq	CDS	1709391	1710557	.	+	0	ID=cds1395;Name=YP_002346522.1;Parent=gene1456;Dbxref=InterPro:IPR007299,InterPro:IPR007349,UniProtKB%2FTrEMBL:Q74VB6,Genbank:YP_002346522.1,GeneID:1174345;gbkey=CDS;gene=yeiB;product=hypothetical protein;protein_id=YP_002346522.1;transl_table=11
NC_003143.1	RefSeq	gene	1711305	1712312	.	+	.	ID=gene1457;Name=mglB;Dbxref=GeneID:1174346;gbkey=Gene;gene=mglB;locus_tag=YPO1507
NC_003143.1	RefSeq	CDS	1711305	1712312	.	+	0	ID=cds1396;Name=YP_002346523.1;Parent=gene1457;Dbxref=InterPro:IPR001761,UniProtKB%2FTrEMBL:Q0WGR5,Genbank:YP_002346523.1,GeneID:1174346;gbkey=CDS;gene=mglB;product=galactose-binding protein;protein_id=YP_002346523.1;transl_table=11
NC_003143.1	RefSeq	gene	1712542	1714062	.	+	.	ID=gene1458;Name=mglA;Dbxref=GeneID:1174347;gbkey=Gene;gene=mglA;locus_tag=YPO1508
NC_003143.1	RefSeq	CDS	1712542	1714062	.	+	0	ID=cds1397;Name=YP_002346524.1;Parent=gene1458;Note=with MglBC transports galactose or methyl galactoside into the cell%3B contains 2 ATP binding domains;Dbxref=UniProtKB%2FTrEMBL:Q7CHQ3,Genbank:YP_002346524.1,GeneID:1174347;gbkey=CDS;gene=mglA;product=galactose%2Fmethyl galaxtoside transporter ATP-binding protein;protein_id=YP_002346524.1;transl_table=11
NC_003143.1	RefSeq	region	1712677	1712700	.	+	.	ID=id1042;Note=PS00017 ATP%2FGTP-binding site motif A %28P-loop%29.;Dbxref=GeneID:1174347;gbkey=misc_feature;gene=mglA
NC_003143.1	RefSeq	region	1713760	1713804	.	+	.	ID=id1043;Note=PS00211 ABC transporters family signature.;Dbxref=GeneID:1174347;gbkey=misc_feature;gene=mglA
NC_003143.1	RefSeq	gene	1714083	1715093	.	+	.	ID=gene1459;Name=mglC;Dbxref=GeneID:1174348;gbkey=Gene;gene=mglC;locus_tag=YPO1509
NC_003143.1	RefSeq	CDS	1714083	1715093	.	+	0	ID=cds1398;Name=YP_002346525.1;Parent=gene1459;Note=ABC transporter%3B functions in galactose transport%3B part of MglA2C2B transporter complex;Dbxref=InterPro:IPR001851,UniProtKB%2FTrEMBL:Q74VB3,Genbank:YP_002346525.1,GeneID:1174348;gbkey=CDS;gene=mglC;product=beta-methylgalactoside transporter inner membrane protein;protein_id=YP_002346525.1;transl_table=11
NC_003143.1	RefSeq	gene	1715538	1716275	.	-	.	ID=gene1460;Name=sanA;Dbxref=GeneID:1174349;gbkey=Gene;gene=sanA;locus_tag=YPO1510
NC_003143.1	RefSeq	CDS	1715538	1716275	.	-	0	ID=cds1399;Name=YP_002346526.1;Parent=gene1460;Dbxref=InterPro:IPR003848,UniProtKB%2FTrEMBL:Q7CHQ4,Genbank:YP_002346526.1,GeneID:1174349;gbkey=CDS;gene=sanA;product=hypothetical protein;protein_id=YP_002346526.1;transl_table=11
NC_003143.1	RefSeq	gene	1716556	1718253	.	-	.	ID=gene1461;Name=sfcA;Dbxref=GeneID:1174350;gbkey=Gene;gene=sfcA;locus_tag=YPO1511
NC_003143.1	RefSeq	CDS	1716556	1718253	.	-	0	ID=cds1400;Name=YP_002346527.1;Parent=gene1461;Note=malic enzyme%3B oxaloacetate-decarboxylating%3B NAD-dependent%3B catalyzes the formation of pyruvate form malate;Dbxref=InterPro:IPR001891,InterPro:IPR012301,InterPro:IPR012302,UniProtKB%2FTrEMBL:Q0WGR1,Genbank:YP_002346527.1,GeneID:1174350;gbkey=CDS;gene=sfcA;product=malate dehydrogenase;protein_id=YP_002346527.1;transl_table=11
NC_003143.1	RefSeq	region	1717405	1717455	.	-	.	ID=id1044;Note=PS00331 Malic enzymes signature.;Dbxref=GeneID:1174350;gbkey=misc_feature;gene=sfcA
NC_003143.1	RefSeq	gene	1718609	1719493	.	-	.	ID=gene1462;Name=cdd;Dbxref=GeneID:1174351;gbkey=Gene;gene=cdd;locus_tag=YPO1512
NC_003143.1	RefSeq	CDS	1718609	1719493	.	-	0	ID=cds1401;Name=YP_002346528.1;Parent=gene1462;Note=Reclaims exogenous and endogenous cytidine and 2%27-deoxycytidine molecules for UMP synthesis;Dbxref=InterPro:IPR002125,InterPro:IPR006263,InterPro:IPR013171,UniProtKB%2FTrEMBL:Q0WGR0,Genbank:YP_002346528.1,GeneID:1174351;gbkey=CDS;gene=cdd;product=cytidine deaminase;protein_id=YP_002346528.1;transl_table=11
NC_003143.1	RefSeq	region	1719086	1719190	.	-	.	ID=id1045;Note=PS00903 Cytidine and deoxycytidylate deaminases zinc-binding region signature.;Dbxref=GeneID:1174351;gbkey=misc_feature;gene=cdd
NC_003143.1	RefSeq	region	1719251	1719274	.	-	.	ID=id1046;Note=PS00017 ATP%2FGTP-binding site motif A %28P-loop%29.;Dbxref=GeneID:1174351;gbkey=misc_feature;gene=cdd
NC_003143.1	RefSeq	gene	1719819	1720514	.	-	.	ID=gene1463;Name=yohK;Dbxref=GeneID:1174352;gbkey=Gene;gene=yohK;locus_tag=YPO1513
NC_003143.1	RefSeq	CDS	1719819	1720514	.	-	0	ID=cds1402;Name=YP_002346529.1;Parent=gene1463;Dbxref=InterPro:IPR005261,InterPro:IPR007300,UniProtKB%2FTrEMBL:Q7CHQ7,Genbank:YP_002346529.1,GeneID:1174352;gbkey=CDS;gene=yohK;product=hypothetical protein;protein_id=YP_002346529.1;transl_table=11
NC_003143.1	RefSeq	gene	1720511	1720918	.	-	.	ID=gene1464;Name=yohJ;Dbxref=GeneID:1174353;gbkey=Gene;gene=yohJ;locus_tag=YPO1514
NC_003143.1	RefSeq	CDS	1720511	1720918	.	-	0	ID=cds1403;Name=YP_002346530.1;Parent=gene1464;Dbxref=InterPro:IPR005538,UniProtKB%2FTrEMBL:Q0WGQ8,Genbank:YP_002346530.1,GeneID:1174353;gbkey=CDS;gene=yohJ;product=hypothetical protein;protein_id=YP_002346530.1;transl_table=11
NC_003143.1	RefSeq	gene	1721160	1722341	.	-	.	ID=gene1465;Name=YPO1515;Dbxref=GeneID:1174354;gbkey=Gene;locus_tag=YPO1515
NC_003143.1	RefSeq	CDS	1721160	1722341	.	-	0	ID=cds1404;Name=YP_002346531.1;Parent=gene1465;Dbxref=InterPro:IPR007114,InterPro:IPR011701,UniProtKB%2FTrEMBL:Q7CHQ8,Genbank:YP_002346531.1,GeneID:1174354;gbkey=CDS;product=multidrug resistance protein;protein_id=YP_002346531.1;transl_table=11
NC_003143.1	RefSeq	gene	1722674	1723930	.	-	.	ID=gene1466;Name=YPO1516;Dbxref=GeneID:1174355;gbkey=Gene;locus_tag=YPO1516
NC_003143.1	RefSeq	CDS	1722674	1723930	.	-	0	ID=cds1405;Name=YP_002346532.1;Parent=gene1466;Note=No significant database hits;Dbxref=UniProtKB%2FTrEMBL:Q7CHQ9,Genbank:YP_002346532.1,GeneID:1174355;gbkey=CDS;product=hypothetical protein;protein_id=YP_002346532.1;transl_table=11
NC_003143.1	RefSeq	gene	1723945	1725036	.	-	.	ID=gene1467;Name=YPO1517;Dbxref=GeneID:1174356;gbkey=Gene;locus_tag=YPO1517
NC_003143.1	RefSeq	CDS	1723945	1725036	.	-	0	ID=cds1406;Name=YP_002346533.1;Parent=gene1467;Dbxref=UniProtKB%2FTrEMBL:Q7CHR0,Genbank:YP_002346533.1,GeneID:1174356;gbkey=CDS;product=sugar ABC transporter;protein_id=YP_002346533.1;transl_table=11
NC_003143.1	RefSeq	gene	1725555	1726381	.	+	.	ID=gene1468;Name=YPO1518;Dbxref=GeneID:1174357;gbkey=Gene;locus_tag=YPO1518;pseudo=true
NC_003143.1	RefSeq	repeat_region	1726454	1726579	.	+	.	ID=id1047;Note=Also a member of the IS200-like elements which carry a %27G%27 at nucleotide position 315 of the complete element. 3%27 termini is represented by misc_feature 1728530..1729124.%7EDisrupted IS200-like insertion sequence:IS1541;gbkey=repeat_region
NC_003143.1	RefSeq	repeat_region	1726580	1728533	.	-	.	ID=id1048;Note=insertion sequence:IS100;gbkey=repeat_region
NC_003143.1	RefSeq	repeat_region	1726580	1726607	.	+	.	ID=id1049;Note=IS100 inverted repeat;gbkey=repeat_region
NC_003143.1	RefSeq	gene	1726646	1727428	.	-	.	ID=gene1469;Name=YPO1519;Note=ypmt1.57c;Dbxref=GeneID:1174358;gbkey=Gene;locus_tag=YPO1519
NC_003143.1	RefSeq	CDS	1726646	1727428	.	-	0	ID=cds1407;Name=YP_002346535.1;Parent=gene1469;Dbxref=InterPro:IPR001270,InterPro:IPR002611,InterPro:IPR003593,UniProtKB%2FTrEMBL:Q7ARK4,Genbank:YP_002346535.1,GeneID:1174358;gbkey=CDS;product=transposase%2FIS protein;protein_id=YP_002346535.1;transl_table=11
NC_003143.1	RefSeq	region	1727078	1727101	.	-	.	ID=id1050;Note=PS00017 ATP%2FGTP-binding site motif A %28P-loop%29.;Dbxref=GeneID:1174358;gbkey=misc_feature
NC_003143.1	RefSeq	gene	1727425	1728447	.	-	.	ID=gene1470;Name=y1093;Dbxref=GeneID:1174359;gbkey=Gene;gene=y1093;gene_synonym=ypmt1;locus_tag=YPO1520
NC_003143.1	RefSeq	CDS	1727425	1728447	.	-	0	ID=cds1408;Name=YP_002346536.1;Parent=gene1470;Dbxref=InterPro:IPR001584,InterPro:IPR006120,InterPro:IPR009057,InterPro:IPR012287,InterPro:IPR012337,UniProtKB%2FTrEMBL:Q7ARN5,Genbank:YP_002346536.1,GeneID:1174359;gbkey=CDS;gene=y1093;product=transposase for insertion sequence IS100;protein_id=YP_002346536.1;transl_table=11
NC_003143.1	RefSeq	region	1728331	1728396	.	-	.	ID=id1051;Note=Predicted helix-turn-helix motif with score 2147 %28%2B6.50 SD%29 at aa 18-39%2C sequence MSSRAIARELGISRNTVKRYLQ;Dbxref=GeneID:1174359;gbkey=misc_feature;gene=y1093
NC_003143.1	RefSeq	repeat_region	1728506	1728533	.	-	.	ID=id1052;Note=IS100 inverted repeat;gbkey=repeat_region
NC_003143.1	RefSeq	repeat_region	1728530	1729124	.	+	.	ID=id1053;Note=Also a member of the IS200-like elements which carry a %27G%27 at nucleotide position 315 of the complete element. 5%27 termini is represented by misc_feature 1726454..1726579.%7EDisrupted IS200-like insertion sequence:IS1541;gbkey=repeat_region
NC_003143.1	RefSeq	gene	1728558	1729016	.	+	.	ID=gene1471;Name=tnp;Dbxref=GeneID:1174360;gbkey=Gene;gene=tnp;locus_tag=YPO1521
NC_003143.1	RefSeq	CDS	1728558	1729016	.	+	0	ID=cds1409;Name=YP_002346537.1;Parent=gene1471;Dbxref=InterPro:IPR002686,UniProtKB%2FTrEMBL:Q74YM6,Genbank:YP_002346537.1,GeneID:1174360;gbkey=CDS;gene=tnp;product=transposase for the IS1541 insertion element;protein_id=YP_002346537.1;transl_table=11
NC_003143.1	RefSeq	gene	1729180	1731207	.	-	.	ID=gene1472;Name=metG;Dbxref=GeneID:1174361;gbkey=Gene;gene=metG;locus_tag=YPO1522
NC_003143.1	RefSeq	CDS	1729180	1731207	.	-	0	ID=cds1410;Name=YP_002346538.1;Parent=gene1472;Note=methionine--tRNA ligase%3B MetRS%3B adds methionine to tRNA%28Met%29 with cleavage of ATP to AMP and diphosphate%3B some MetRS enzymes form dimers depending on a C-terminal domain that is also found in other proteins such as Trbp111 in Aquifex aeolicus and the cold-shock protein CsaA from Bacillus subtilis while others do not%3B four subfamilies exist based on sequence motifs and zinc content;Dbxref=InterPro:IPR001412,InterPro:IPR002300,InterPro:IPR002304,InterPro:IPR002547,InterPro:IPR004495,InterPro:IPR008224,InterPro:IPR008994,InterPro:IPR009080,InterPro:IPR012340,UniProtKB%2FTrEMBL:Q0WGQ0,Genbank:YP_002346538.1,GeneID:1174361;gbkey=CDS;gene=metG;product=methionyl-tRNA synthetase;protein_id=YP_002346538.1;transl_table=11
NC_003143.1	RefSeq	region	1731130	1731165	.	-	.	ID=id1054;Note=PS00178 Aminoacyl-transfer RNA synthetases class-I signature.;Dbxref=GeneID:1174361;gbkey=misc_feature;gene=metG
NC_003143.1	RefSeq	gene	1731472	1732584	.	+	.	ID=gene1473;Name=YPO1523;Dbxref=GeneID:1174362;gbkey=Gene;locus_tag=YPO1523
NC_003143.1	RefSeq	CDS	1731472	1732584	.	+	0	ID=cds1411;Name=YP_002346539.1;Parent=gene1473;Dbxref=InterPro:IPR000808,UniProtKB%2FTrEMBL:Q7CHR2,Genbank:YP_002346539.1,GeneID:1174362;gbkey=CDS;product=ATPase;protein_id=YP_002346539.1;transl_table=11
NC_003143.1	RefSeq	region	1731817	1731840	.	+	.	ID=id1055;Note=PS00017 ATP%2FGTP-binding site motif A %28P-loop%29.;Dbxref=GeneID:1174362;gbkey=misc_feature
NC_003143.1	RefSeq	region	1732111	1732161	.	+	.	ID=id1056;Note=PS01215 Mrp family signature.;Dbxref=GeneID:1174362;gbkey=misc_feature
NC_003143.1	RefSeq	gene	1732829	1733470	.	+	.	ID=gene1474;Name=udk;Dbxref=GeneID:1174363;gbkey=Gene;gene=udk;locus_tag=YPO1524
NC_003143.1	RefSeq	CDS	1732829	1733470	.	+	0	ID=cds1412;Name=YP_002346540.1;Parent=gene1474;Note=functions in pyrimidine salvage%3B pyrimidine ribonucleoside kinase%3B phosphorylates nucleosides or dinucleosides to make UMP or CMP using ATP or GTP as the donor;Dbxref=InterPro:IPR000764,InterPro:IPR006083,UniProtKB%2FTrEMBL:Q0WGP8,Genbank:YP_002346540.1,GeneID:1174363;gbkey=CDS;gene=udk;product=uridine kinase;protein_id=YP_002346540.1;transl_table=11
NC_003143.1	RefSeq	region	1732871	1732894	.	+	.	ID=id1057;Note=PS00017 ATP%2FGTP-binding site motif A %28P-loop%29.;Dbxref=GeneID:1174363;gbkey=misc_feature;gene=udk
NC_003143.1	RefSeq	gene	1733575	1734156	.	+	.	ID=gene1475;Name=dcd;Dbxref=GeneID:1174364;gbkey=Gene;gene=dcd;gene_synonym=dus,paxA;locus_tag=YPO1525
NC_003143.1	RefSeq	CDS	1733575	1734156	.	+	0	ID=cds1413;Name=YP_002346541.1;Parent=gene1475;Note=Catalyzes the formation of dUTP from dCTP in thymidylate biosynthesis;Dbxref=InterPro:IPR003232,InterPro:IPR008180,InterPro:IPR011962,UniProtKB%2FTrEMBL:Q0WGP7,Genbank:YP_002346541.1,GeneID:1174364;gbkey=CDS;gene=dcd;product=deoxycytidine triphosphate deaminase;protein_id=YP_002346541.1;transl_table=11
NC_003143.1	RefSeq	gene	1734343	1736199	.	+	.	ID=gene1476;Name=YPO1526;Dbxref=GeneID:1174365;gbkey=Gene;locus_tag=YPO1526
NC_003143.1	RefSeq	CDS	1734343	1736199	.	+	0	ID=cds1414;Name=YP_002346542.1;Parent=gene1476;Note=YegA%3B inner membrane protein involved in the assembly of outer membrane proteins %28OMPs%29%3B asmA-null mutants show low lipopolysaccharide %28LPS%29 levels%2C suggesting a role in LPS biogenesis and%2For in restricting outer membrane fluidity%2C resulting on altered assembly of OMPs;Dbxref=InterPro:IPR007844,UniProtKB%2FTrEMBL:Q7CHR3,Genbank:YP_002346542.1,GeneID:1174365;gbkey=CDS;product=assembly protein;protein_id=YP_002346542.1;transl_table=11
NC_003143.1	RefSeq	gene	1736344	1737930	.	-	.	ID=gene1477;Name=YPO1527;Dbxref=GeneID:1174366;gbkey=Gene;locus_tag=YPO1527
NC_003143.1	RefSeq	CDS	1736344	1737930	.	-	0	ID=cds1415;Name=YP_002346543.1;Parent=gene1477;Dbxref=InterPro:IPR000644,InterPro:IPR005170,InterPro:IPR005496,UniProtKB%2FTrEMBL:Q74VA0,Genbank:YP_002346543.1,GeneID:1174366;gbkey=CDS;product=hypothetical protein;protein_id=YP_002346543.1;transl_table=11
NC_003143.1	RefSeq	gene	1738372	1739151	.	+	.	ID=gene1478;Name=YPO1528;Dbxref=GeneID:1174367;gbkey=Gene;locus_tag=YPO1528
NC_003143.1	RefSeq	CDS	1738372	1739151	.	+	0	ID=cds1416;Name=YP_002346544.1;Parent=gene1478;Dbxref=InterPro:IPR008090,UniProtKB%2FTrEMBL:Q7CHR4,Genbank:YP_002346544.1,GeneID:1174367;gbkey=CDS;product=ferric iron reductase involved in ferric hydroximate transport;protein_id=YP_002346544.1;transl_table=11
NC_003143.1	RefSeq	gene	1739303	1740850	.	+	.	ID=gene1479;Name=YPO1529;Dbxref=GeneID:1174368;gbkey=Gene;locus_tag=YPO1529
NC_003143.1	RefSeq	CDS	1739303	1740850	.	+	0	ID=cds1417;Name=YP_002346545.1;Parent=gene1479;Dbxref=InterPro:IPR002129,InterPro:IPR010977,UniProtKB%2FTrEMBL:Q7CHR5,Genbank:YP_002346545.1,GeneID:1174368;gbkey=CDS;product=decarboxylase;protein_id=YP_002346545.1;transl_table=11
NC_003143.1	RefSeq	gene	1740885	1742183	.	+	.	ID=gene1480;Name=alcA;Dbxref=GeneID:1174369;gbkey=Gene;gene=alcA;locus_tag=YPO1530
NC_003143.1	RefSeq	CDS	1740885	1742183	.	+	0	ID=cds1418;Name=YP_002346546.1;Parent=gene1480;Dbxref=UniProtKB%2FTrEMBL:Q3V8F6,Genbank:YP_002346546.1,GeneID:1174369;gbkey=CDS;gene=alcA;product=siderophore biosynthetic enzyme;protein_id=YP_002346546.1;transl_table=11
NC_003143.1	RefSeq	region	1740912	1740944	.	+	.	ID=id1058;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site.;Dbxref=GeneID:1174369;gbkey=misc_feature;gene=alcA
NC_003143.1	RefSeq	gene	1742180	1742761	.	+	.	ID=gene1481;Name=alcB;Dbxref=GeneID:1174370;gbkey=Gene;gene=alcB;locus_tag=YPO1531
NC_003143.1	RefSeq	CDS	1742180	1742761	.	+	0	ID=cds1419;Name=YP_002346547.1;Parent=gene1481;Dbxref=UniProtKB%2FTrEMBL:Q3V8F7,Genbank:YP_002346547.1,GeneID:1174370;gbkey=CDS;gene=alcB;product=siderophore biosynthetic enzyme;protein_id=YP_002346547.1;transl_table=11
NC_003143.1	RefSeq	gene	1742758	1744602	.	+	.	ID=gene1482;Name=alcB;Dbxref=GeneID:1174371;gbkey=Gene;gene=alcB;locus_tag=YPO1532
NC_003143.1	RefSeq	CDS	1742758	1744602	.	+	0	ID=cds1420;Name=YP_002346548.1;Parent=gene1482;Dbxref=InterPro:IPR007310,UniProtKB%2FTrEMBL:Q0WGP0,Genbank:YP_002346548.1,GeneID:1174371;gbkey=CDS;product=siderophore biosynthetic enzyme;protein_id=YP_002346548.1;transl_table=11
NC_003143.1	RefSeq	gene	1744711	1745559	.	-	.	ID=gene1483;Name=YPO1533;Dbxref=GeneID:1174372;gbkey=Gene;locus_tag=YPO1533
NC_003143.1	RefSeq	CDS	1744711	1745559	.	-	0	ID=cds1421;Name=YP_002346549.1;Parent=gene1483;Dbxref=InterPro:IPR003439,InterPro:IPR003593,UniProtKB%2FTrEMBL:Q7CHR6,Genbank:YP_002346549.1,GeneID:1174372;gbkey=CDS;product=iron-siderophore transporter ATP-binding protein;protein_id=YP_002346549.1;transl_table=11
NC_003143.1	RefSeq	region	1745032	1745076	.	-	.	ID=id1059;Note=PS00211 ABC transporters family signature.;Dbxref=GeneID:1174372;gbkey=misc_feature
NC_003143.1	RefSeq	region	1745365	1745388	.	-	.	ID=id1060;Note=PS00017 ATP%2FGTP-binding site motif A %28P-loop%29.;Dbxref=GeneID:1174372;gbkey=misc_feature
NC_003143.1	RefSeq	gene	1745556	1746596	.	-	.	ID=gene1484;Name=YPO1534;Dbxref=GeneID:1174373;gbkey=Gene;locus_tag=YPO1534
NC_003143.1	RefSeq	CDS	1745556	1746596	.	-	0	ID=cds1422;Name=YP_002346550.1;Parent=gene1484;Dbxref=InterPro:IPR000522,UniProtKB%2FTrEMBL:Q7CHR7,Genbank:YP_002346550.1,GeneID:1174373;gbkey=CDS;product=iron-siderophore transporter membrane permease;protein_id=YP_002346550.1;transl_table=11
NC_003143.1	RefSeq	gene	1746583	1747623	.	-	.	ID=gene1485;Name=YPO1535;Dbxref=GeneID:1174374;gbkey=Gene;locus_tag=YPO1535
NC_003143.1	RefSeq	CDS	1746583	1747623	.	-	0	ID=cds1423;Name=YP_002346551.1;Parent=gene1485;Dbxref=InterPro:IPR000522,UniProtKB%2FTrEMBL:Q7CHR8,Genbank:YP_002346551.1,GeneID:1174374;gbkey=CDS;product=iron-siderophore transporter transmembrane protein;protein_id=YP_002346551.1;transl_table=11
NC_003143.1	RefSeq	gene	1747620	1748699	.	-	.	ID=gene1486;Name=YPO1536;Dbxref=GeneID:1174375;gbkey=Gene;locus_tag=YPO1536
NC_003143.1	RefSeq	CDS	1747620	1748699	.	-	0	ID=cds1424;Name=YP_002346552.1;Parent=gene1486;Dbxref=InterPro:IPR002491,UniProtKB%2FTrEMBL:Q0WGN6,Genbank:YP_002346552.1,GeneID:1174375;gbkey=CDS;product=iron-siderophore transporter substrate-binding protein;protein_id=YP_002346552.1;transl_table=11
NC_003143.1	RefSeq	gene	1748789	1751050	.	-	.	ID=gene1487;Name=YPO1537;Dbxref=GeneID:1174376;gbkey=Gene;locus_tag=YPO1537
NC_003143.1	RefSeq	CDS	1748789	1751050	.	-	0	ID=cds1425;Name=YP_002346553.1;Parent=gene1487;Dbxref=InterPro:IPR000531,InterPro:IPR010105,InterPro:IPR010917,InterPro:IPR012910,UniProtKB%2FTrEMBL:Q7CHR9,Genbank:YP_002346553.1,GeneID:1174376;gbkey=CDS;product=iron-siderophore receptor;protein_id=YP_002346553.1;transl_table=11
NC_003143.1	RefSeq	region	1750940	1750972	.	-	.	ID=id1061;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site.;Dbxref=GeneID:1174376;gbkey=misc_feature
NC_003143.1	RefSeq	gene	1751263	1753077	.	-	.	ID=gene1488;Name=YPO1538;Dbxref=GeneID:1174377;gbkey=Gene;locus_tag=YPO1538
NC_003143.1	RefSeq	CDS	1751263	1753077	.	-	0	ID=cds1426;Name=YP_002346554.1;Parent=gene1488;Dbxref=InterPro:IPR007310,UniProtKB%2FTrEMBL:Q3V8E2,Genbank:YP_002346554.1,GeneID:1174377;gbkey=CDS;product=siderophore biosynthetic enzyme;protein_id=YP_002346554.1;transl_table=11
NC_003143.1	RefSeq	gene	1754023	1754913	.	+	.	ID=gene1489;Name=galU;Dbxref=GeneID:1174378;gbkey=Gene;gene=galU;locus_tag=YPO1539
NC_003143.1	RefSeq	CDS	1754023	1754913	.	+	0	ID=cds1427;Name=YP_002346555.1;Parent=gene1489;Dbxref=InterPro:IPR005771,InterPro:IPR005835,UniProtKB%2FTrEMBL:Q7CHS0,Genbank:YP_002346555.1,GeneID:1174378;gbkey=CDS;gene=galU;product=UTP-glucose-1-phosphate uridylyltransferase;protein_id=YP_002346555.1;transl_table=11
NC_003143.1	RefSeq	region	1754779	1754802	.	+	.	ID=id1062;Note=PS00017 ATP%2FGTP-binding site motif A %28P-loop%29.;Dbxref=GeneID:1174378;gbkey=misc_feature;gene=galU
NC_003143.1	RefSeq	gene	1754997	1755890	.	+	.	ID=gene1490;Name=galF;Dbxref=GeneID:1174379;gbkey=Gene;gene=galF;locus_tag=YPO1540
NC_003143.1	RefSeq	CDS	1754997	1755890	.	+	0	ID=cds1428;Name=YP_002346556.1;Parent=gene1490;Dbxref=InterPro:IPR005771,InterPro:IPR005835,UniProtKB%2FTrEMBL:Q7CHS1,Genbank:YP_002346556.1,GeneID:1174379;gbkey=CDS;gene=galF;product=UTP-glucose-1-phosphate uridylyltransferase;protein_id=YP_002346556.1;transl_table=11
NC_003143.1	RefSeq	region	1755756	1755779	.	+	.	ID=id1063;Note=PS00017 ATP%2FGTP-binding site motif A %28P-loop%29.;Dbxref=GeneID:1174379;gbkey=misc_feature;gene=galF
NC_003143.1	RefSeq	gene	1756276	1757685	.	+	.	ID=gene1491;Name=gnd;Dbxref=GeneID:1174380;gbkey=Gene;gene=gnd;locus_tag=YPO1541
NC_003143.1	RefSeq	CDS	1756276	1757685	.	+	0	ID=cds1429;Name=YP_002346557.1;Parent=gene1491;Note=catalyzes the formation of D-ribulose 5-phosphate from 6-phospho-D-gluconate;Dbxref=InterPro:IPR006113,InterPro:IPR006114,InterPro:IPR006115,InterPro:IPR006183,InterPro:IPR006184,InterPro:IPR008927,InterPro:IPR012283,InterPro:IPR012284,UniProtKB%2FTrEMBL:Q0WGN1,Genbank:YP_002346557.1,GeneID:1174380;gbkey=CDS;gene=gnd;product=6-phosphogluconate dehydrogenase;protein_id=YP_002346557.1;transl_table=11
NC_003143.1	RefSeq	region	1757032	1757070	.	+	.	ID=id1064;Note=PS00461 6-phosphogluconate dehydrogenase signature.;Dbxref=GeneID:1174380;gbkey=misc_feature;gene=gnd
NC_003143.1	RefSeq	gene	1757885	1758499	.	-	.	ID=gene1492;Name=hisI;Dbxref=GeneID:1174381;gbkey=Gene;gene=hisI;gene_synonym=hisIE;locus_tag=YPO1542
NC_003143.1	RefSeq	CDS	1757885	1758499	.	-	0	ID=cds1430;Name=YP_002346558.1;Parent=gene1492;Note=catalyzes the formation of 1-%285-phosphoribosyl%29-AMP from 1-%285-phosphoribosyl%29-ATP and the subsequent formation of 1-%285-phosphoribosyl%29-5-%28%285-phosphoribosylamino%29methylideneamino%29imidazole-4-carboxamide from 1-%285-phosphoribosyl%29-AMP in histidine biosynthesis;Dbxref=InterPro:IPR002100,InterPro:IPR002496,InterPro:IPR008179,UniProtKB%2FTrEMBL:Q0WGN0,Genbank:YP_002346558.1,GeneID:1174381;gbkey=CDS;gene=hisI;product=bifunctional phosphoribosyl-AMP cyclohydrolase%2Fphosphoribosyl-ATP pyrophosphatase;protein_id=YP_002346558.1;transl_table=11
NC_003143.1	RefSeq	gene	1758493	1759269	.	-	.	ID=gene1493;Name=hisF;Dbxref=GeneID:1174382;gbkey=Gene;gene=hisF;locus_tag=YPO1543
NC_003143.1	RefSeq	CDS	1758493	1759269	.	-	0	ID=cds1431;Name=YP_002346559.1;Parent=gene1493;Note=catalyzes the conversion of 5-%5B%285-phospho-1-deoxyribulos-1-ylamino%29methylideneamino%5D-1-%285-phosphoribosyl%29imidazole-4-carboxamideand glutamine to imidazole-glycerol phosphate%2C 5-aminoimidazol-4-carboxamideribonucleotide and glutamate%3B the HisF subunit acts as a cyclase;Dbxref=InterPro:IPR004651,InterPro:IPR006062,InterPro:IPR011060,UniProtKB%2FTrEMBL:Q0WGM9,Genbank:YP_002346559.1,GeneID:1174382;gbkey=CDS;gene=hisF;product=imidazole glycerol phosphate synthase subunit HisF;protein_id=YP_002346559.1;transl_table=11
NC_003143.1	RefSeq	gene	1759251	1759988	.	-	.	ID=gene1494;Name=hisA;Dbxref=GeneID:1174383;gbkey=Gene;gene=hisA;locus_tag=YPO1544
NC_003143.1	RefSeq	CDS	1759251	1759988	.	-	0	ID=cds1432;Name=YP_002346560.1;Parent=gene1494;Note=catalyzes the formation of 5-%285-phospho-1-deoxyribulos-1-ylamino%29methylideneamino-l-%285-phosphoribosyl%29imidazole-4-carboxamide from 1-%285-phosphoribosyl%29-5-%5B%285-phosphoribosylamino%29methylideneamino%5D imidazole-4-carboxamide;Dbxref=InterPro:IPR002110,InterPro:IPR006062,InterPro:IPR006063,InterPro:IPR011060,UniProtKB%2FTrEMBL:Q0WGM8,Genbank:YP_002346560.1,GeneID:1174383;gbkey=CDS;gene=hisA;product=1-%285-phosphoribosyl%29-5-%5B%285-phosphoribosylamino%29methylideneamino%5D imidazole-4-carboxamide isomerase;protein_id=YP_002346560.1;transl_table=11
NC_003143.1	RefSeq	gene	1759994	1760584	.	-	.	ID=gene1495;Name=hisH;Dbxref=GeneID:1174384;gbkey=Gene;gene=hisH;locus_tag=YPO1545
NC_003143.1	RefSeq	CDS	1759994	1760584	.	-	0	ID=cds1433;Name=YP_002346561.1;Parent=gene1495;Note=with HisF IGPS catalyzes the conversion of phosphoribulosyl-formimino-5-aminoimidazole-4-carboxamide ribonucleotide phosphate and glutamine to imidazole-glycerol phosphate%2C 5-aminoimidazol-4-carboxamide ribonucleotide%2C and glutamate in histidine biosynthesis%3B the HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of imidazole-glycerol phosphate and 5-aminoimidazol-4-carboxamide ribonucleotide;Dbxref=InterPro:IPR000991,InterPro:IPR006220,InterPro:IPR010139,InterPro:IPR011702,InterPro:IPR012998,UniProtKB%2FTrEMBL:Q0WGM7,Genbank:YP_002346561.1,GeneID:1174384;gbkey=CDS;gene=hisH;product=imidazole glycerol phosphate synthase subunit HisH;protein_id=YP_002346561.1;transl_table=11
NC_003143.1	RefSeq	region	1760336	1760371	.	-	.	ID=id1065;Note=PS00442 Glutamine amidotransferases class-I active site.;Dbxref=GeneID:1174384;gbkey=misc_feature;gene=hisH
NC_003143.1	RefSeq	gene	1760584	1761651	.	-	.	ID=gene1496;Name=hisB;Dbxref=GeneID:1174385;gbkey=Gene;gene=hisB;locus_tag=YPO1546
NC_003143.1	RefSeq	CDS	1760584	1761651	.	-	0	ID=cds1434;Name=YP_002346562.1;Parent=gene1496;Note=catalyzes the formation of 3-%28imidazol-4-yl%29-2-oxopropyl phosphate from D-ethythro-1-%28imidazol-4-yl%29glycerol 3-phosphate and histidinol from histidinol phosphate;Dbxref=InterPro:IPR000807,InterPro:IPR005954,InterPro:IPR006543,InterPro:IPR006549,UniProtKB%2FTrEMBL:Q0WGM6,Genbank:YP_002346562.1,GeneID:1174385;gbkey=CDS;gene=hisB;product=imidazole glycerol-phosphate dehydratase%2Fhistidinol phosphatase;protein_id=YP_002346562.1;transl_table=11
NC_003143.1	RefSeq	region	1760659	1760697	.	-	.	ID=id1066;Note=PS00955 Imidazoleglycerol-phosphate dehydratase signature 2.;Dbxref=GeneID:1174385;gbkey=misc_feature;gene=hisB
NC_003143.1	RefSeq	region	1760935	1760976	.	-	.	ID=id1067;Note=PS00954 Imidazoleglycerol-phosphate dehydratase signature 1.;Dbxref=GeneID:1174385;gbkey=misc_feature;gene=hisB
NC_003143.1	RefSeq	gene	1761648	1762796	.	-	.	ID=gene1497;Name=hisC;Dbxref=GeneID:1174386;gbkey=Gene;gene=hisC;locus_tag=YPO1547
NC_003143.1	RefSeq	CDS	1761648	1762796	.	-	0	ID=cds1435;Name=YP_002346563.1;Parent=gene1497;Note=catalyzes the formation of L-histidinol phosphate from imidazole-acetol phosphate and glutamate in histidine biosynthesis;Dbxref=InterPro:IPR001917,InterPro:IPR004839,InterPro:IPR005861,UniProtKB%2FTrEMBL:Q0WGM5,Genbank:YP_002346563.1,GeneID:1174386;gbkey=CDS;gene=hisC;product=histidinol-phosphate aminotransferase;protein_id=YP_002346563.1;transl_table=11
NC_003143.1	RefSeq	region	1762134	1762163	.	-	.	ID=id1068;Note=PS00599 Aminotransferases class-II pyridoxal-phosphate attachment site.;Dbxref=GeneID:1174386;gbkey=misc_feature;gene=hisC
NC_003143.1	RefSeq	gene	1762799	1764130	.	-	.	ID=gene1498;Name=hisD;Dbxref=GeneID:1174387;gbkey=Gene;gene=hisD;locus_tag=YPO1548
NC_003143.1	RefSeq	CDS	1762799	1764130	.	-	0	ID=cds1436;Name=YP_002346564.1;Parent=gene1498;Note=catalyzes the oxidation of L-histidinol to L-histidinaldehyde and then to L-histidine in histidine biosynthesis%3B functions as a dimer;Dbxref=InterPro:IPR001692,InterPro:IPR012131,UniProtKB%2FTrEMBL:Q0WGM4,Genbank:YP_002346564.1,GeneID:1174387;gbkey=CDS;gene=hisD;product=histidinol dehydrogenase;protein_id=YP_002346564.1;transl_table=11
NC_003143.1	RefSeq	region	1763336	1763434	.	-	.	ID=id1069;Note=PS00611 Histidinol dehydrogenase signature.;Dbxref=GeneID:1174387;gbkey=misc_feature;gene=hisD
NC_003143.1	RefSeq	gene	1764134	1765033	.	-	.	ID=gene1499;Name=hisG;Dbxref=GeneID:1174388;gbkey=Gene;gene=hisG;locus_tag=YPO1549
NC_003143.1	RefSeq	CDS	1764134	1765033	.	-	0	ID=cds1437;Name=YP_002346565.1;Parent=gene1499;Note=long form of enzyme%3B catalyzes the formation of N%27-5%27-phosphoribosyl-ATP from phosphoribosyl pyrophosphate%3B crucial role in histidine biosynthesis%3B forms active dimers and inactive hexamers which is dependent on concentration of substrates and inhibitors;Dbxref=InterPro:IPR001348,InterPro:IPR013115,InterPro:IPR013820,UniProtKB%2FTrEMBL:Q0WGM3,Genbank:YP_002346565.1,GeneID:1174388;gbkey=CDS;gene=hisG;product=ATP phosphoribosyltransferase;protein_id=YP_002346565.1;transl_table=11
NC_003143.1	RefSeq	region	1764503	1764568	.	-	.	ID=id1070;Note=PS01316 ATP phosphoribosyltransferase signature.;Dbxref=GeneID:1174388;gbkey=misc_feature;gene=hisG
NC_003143.1	RefSeq	gene	1765739	1766566	.	+	.	ID=gene1500;Name=YPO1551;Dbxref=GeneID:1174390;gbkey=Gene;locus_tag=YPO1551
NC_003143.1	RefSeq	CDS	1765739	1766566	.	+	0	ID=cds1438;Name=YP_002346567.1;Parent=gene1500;Dbxref=InterPro:IPR006115,UniProtKB%2FTrEMBL:Q7CHS3,Genbank:YP_002346567.1,GeneID:1174390;gbkey=CDS;product=hypothetical protein;protein_id=YP_002346567.1;transl_table=11
NC_003143.1	RefSeq	region	1766246	1766269	.	+	.	ID=id1071;Note=PS00017 ATP%2FGTP-binding site motif A %28P-loop%29.;Dbxref=GeneID:1174390;gbkey=misc_feature
NC_003143.1	RefSeq	gene	1766721	1767155	.	-	.	ID=gene1501;Name=YPO1552;Dbxref=GeneID:1174391;gbkey=Gene;locus_tag=YPO1552
NC_003143.1	RefSeq	CDS	1766721	1767155	.	-	0	ID=cds1439;Name=YP_002346568.1;Parent=gene1501;Note=Doubtful CDS with no significant database hits. The N-terminal region is similar to a repeat region which is found scattered throughout the genome;Dbxref=UniProtKB%2FTrEMBL:Q74V87,Genbank:YP_002346568.1,GeneID:1174391;gbkey=CDS;product=hypothetical protein;protein_id=YP_002346568.1;transl_table=11
NC_003143.1	RefSeq	gene	1767400	1768395	.	-	.	ID=gene1502;Name=YPO1553;Dbxref=GeneID:1174392;gbkey=Gene;locus_tag=YPO1553
NC_003143.1	RefSeq	CDS	1767400	1768395	.	-	0	ID=cds1440;Name=YP_002346569.1;Parent=gene1502;Dbxref=InterPro:IPR001851,UniProtKB%2FTrEMBL:Q7CHS4,Genbank:YP_002346569.1,GeneID:1174392;gbkey=CDS;product=ribose transporter permease;protein_id=YP_002346569.1;transl_table=11
NC_003143.1	RefSeq	gene	1768392	1769932	.	-	.	ID=gene1503;Name=YPO1554;Dbxref=GeneID:1174393;gbkey=Gene;locus_tag=YPO1554;pseudo=true
NC_003143.1	RefSeq	region	1768656	1768700	.	-	.	ID=id1072;Note=PS00211 ABC transporters family signature.;Dbxref=GeneID:1174393;gbkey=misc_feature
NC_003143.1	RefSeq	region	1769789	1769812	.	-	.	ID=id1073;Note=PS00017 ATP%2FGTP-binding site motif A %28P-loop%29.;Dbxref=GeneID:1174393;gbkey=misc_feature
NC_003143.1	RefSeq	gene	1770218	1771309	.	+	.	ID=gene1504;Name=YPO1556;Dbxref=GeneID:1174394;gbkey=Gene;locus_tag=YPO1556
NC_003143.1	RefSeq	CDS	1770218	1771309	.	+	0	ID=cds1441;Name=YP_002346570.1;Parent=gene1504;Note=member of the iron-containing alcohol dehydrogenase family%3B unknown function;Dbxref=InterPro:IPR001670,UniProtKB%2FTrEMBL:Q74V85,Genbank:YP_002346570.1,GeneID:1174394;gbkey=CDS;product=hypothetical protein;protein_id=YP_002346570.1;transl_table=11
NC_003143.1	RefSeq	region	1770671	1770757	.	+	.	ID=id1074;Note=PS00913 Iron-containing alcohol dehydrogenases signature 1.;Dbxref=GeneID:1174394;gbkey=misc_feature
NC_003143.1	RefSeq	gene	1771769	1773160	.	+	.	ID=gene1505;Name=yeeF;Dbxref=GeneID:1174395;gbkey=Gene;gene=yeeF;locus_tag=YPO1557
NC_003143.1	RefSeq	CDS	1771769	1773160	.	+	0	ID=cds1442;Name=YP_002346571.1;Parent=gene1505;Dbxref=InterPro:IPR002293,InterPro:IPR004841,UniProtKB%2FTrEMBL:Q7CHS5,Genbank:YP_002346571.1,GeneID:1174395;gbkey=CDS;gene=yeeF;product=amino acid permease;protein_id=YP_002346571.1;transl_table=11
NC_003143.1	RefSeq	gene	1773897	1775327	.	-	.	ID=gene1506;Name=sbcB;Dbxref=GeneID:1174396;gbkey=Gene;gene=sbcB;gene_synonym=xonA;locus_tag=YPO1558
NC_003143.1	RefSeq	CDS	1773897	1775327	.	-	0	ID=cds1443;Name=YP_002346572.1;Parent=gene1506;Note=Exonucleolytic cleavage in the 3%27- to 5%27-direction to yield nucleoside 5%27-phosphates;Dbxref=InterPro:IPR012337,InterPro:IPR013520,InterPro:IPR013620,UniProtKB%2FTrEMBL:Q74V83,Genbank:YP_002346572.1,GeneID:1174396;gbkey=CDS;gene=sbcB;product=exonuclease I;protein_id=YP_002346572.1;transl_table=11
NC_003143.1	RefSeq	gene	1775590	1776729	.	+	.	ID=gene1507;Name=YPO1559;Dbxref=GeneID:1174397;gbkey=Gene;locus_tag=YPO1559
NC_003143.1	RefSeq	CDS	1775590	1776729	.	+	0	ID=cds1444;Name=YP_002346573.1;Parent=gene1507;Dbxref=InterPro:IPR013120,UniProtKB%2FTrEMBL:Q7CHS6,Genbank:YP_002346573.1,GeneID:1174397;gbkey=CDS;product=hypothetical protein;protein_id=YP_002346573.1;transl_table=11
NC_003143.1	RefSeq	gene	1777163	1777480	.	+	.	ID=gene1508;Name=YPO1560;Dbxref=GeneID:1174398;gbkey=Gene;locus_tag=YPO1560
NC_003143.1	RefSeq	CDS	1777163	1777480	.	+	0	ID=cds1445;Name=YP_002346574.1;Parent=gene1508;Dbxref=InterPro:IPR007458,UniProtKB%2FTrEMBL:Q0WGL4,Genbank:YP_002346574.1,GeneID:1174398;gbkey=CDS;product=hypothetical protein;protein_id=YP_002346574.1;transl_table=11
NC_003143.1	RefSeq	region	1779103	1782174	.	-	.	ID=id1075;Note=CDS is disrupted by the insertion of IS285 element after codon 1024%2C near the C-terminus of the protein. It is not clear whether this insertion affects the function of the protein. The full length CDS is similar to Escherichia coli intimin EaeA TR:AAC38392 %28EMBL:M58154%29 %28939 aa%29 fasta scores: E%28%29: 0%2C 33.7%25 id in 732 aa%2C and to Escherichia coli O157:H7 EDL933  adhesin EaeH TR:AAG54632 %28EMBL:AE005207%29 %281417 aa%29 fasta scores: E%28%29: 0%2C 30.7%25 id in 1111 aa;Dbxref=PSEUDO:CAL20206.1;gbkey=misc_feature;part=1%2F2;pseudo=true
NC_003143.1	RefSeq	region	1777624	1777770	.	-	.	ID=id1075;Note=CDS is disrupted by the insertion of IS285 element after codon 1024%2C near the C-terminus of the protein. It is not clear whether this insertion affects the function of the protein. The full length CDS is similar to Escherichia coli intimin EaeA TR:AAC38392 %28EMBL:M58154%29 %28939 aa%29 fasta scores: E%28%29: 0%2C 33.7%25 id in 732 aa%2C and to Escherichia coli O157:H7 EDL933  adhesin EaeH TR:AAG54632 %28EMBL:AE005207%29 %281417 aa%29 fasta scores: E%28%29: 0%2C 30.7%25 id in 1111 aa;Dbxref=PSEUDO:CAL20206.1;gbkey=misc_feature;part=2%2F2;pseudo=true
NC_003143.1	RefSeq	repeat_region	1777772	1777779	.	+	.	ID=id1076;Note=duplication flanking insertion sequence;gbkey=repeat_region
NC_003143.1	RefSeq	repeat_region	1777780	1779094	.	+	.	ID=id1077;Note=insertion sequence:IS285;gbkey=repeat_region
NC_003143.1	RefSeq	repeat_region	1777780	1777808	.	+	.	ID=id1078;Note=IS285 inverted repeat;gbkey=repeat_region
NC_003143.1	RefSeq	gene	1777851	1779059	.	+	.	ID=gene1509;Name=y1062;Dbxref=GeneID:1174400;gbkey=Gene;gene=y1062;gene_synonym=ypmt1.80C;locus_tag=YPO1561
NC_003143.1	RefSeq	CDS	1777851	1779059	.	+	0	ID=cds1446;Name=YP_002346575.1;Parent=gene1509;Dbxref=InterPro:IPR001207,UniProtKB%2FTrEMBL:Q7ARB0,Genbank:YP_002346575.1,GeneID:1174400;gbkey=CDS;gene=y1062;product=transposase for the IS285 insertion element;protein_id=YP_002346575.1;transl_table=11
NC_003143.1	RefSeq	region	1778544	1778618	.	+	.	ID=id1079;Note=PS01007 Transposases%2C Mutator family%2C signature.;Dbxref=GeneID:1174400;gbkey=misc_feature;gene=y1062
NC_003143.1	RefSeq	gene	1779022	1782174	.	-	.	ID=gene1510;Name=YPO1562;Dbxref=GeneID:1174399;gbkey=Gene;locus_tag=YPO1562
NC_003143.1	RefSeq	CDS	1779022	1782174	.	-	0	ID=cds1447;Name=YP_008479701.1;Parent=gene1510;Dbxref=Genbank:YP_008479701.1,GeneID:1174399;gbkey=CDS;product=hypothetical protein;protein_id=YP_008479701.1;transl_table=11
NC_003143.1	RefSeq	repeat_region	1779066	1779094	.	-	.	ID=id1080;Note=IS285 inverted repeat;Dbxref=GeneID:1174399;gbkey=repeat_region
NC_003143.1	RefSeq	region	1779095	1779102	.	+	.	ID=id1081;Note=Sequence duplication around IS insertion;gbkey=misc_feature
NC_003143.1	RefSeq	gene	1783103	1784503	.	+	.	ID=gene1511;Name=YPO1563;Dbxref=GeneID:1174401;gbkey=Gene;locus_tag=YPO1563
NC_003143.1	RefSeq	CDS	1783103	1784503	.	+	0	ID=cds1448;Name=YP_002346576.1;Parent=gene1511;Dbxref=InterPro:IPR007114,InterPro:IPR011701,UniProtKB%2FTrEMBL:Q7CHS8,Genbank:YP_002346576.1,GeneID:1174401;gbkey=CDS;product=transmembrane transporter;protein_id=YP_002346576.1;transl_table=11
NC_003143.1	RefSeq	gene	1784512	1784937	.	-	.	ID=gene1512;Name=YPO1564;Dbxref=GeneID:1174402;gbkey=Gene;locus_tag=YPO1564
NC_003143.1	RefSeq	CDS	1784512	1784937	.	-	0	ID=cds1449;Name=YP_002346577.1;Parent=gene1512;Dbxref=InterPro:IPR007263,UniProtKB%2FTrEMBL:Q0WGL1,Genbank:YP_002346577.1,GeneID:1174402;gbkey=CDS;product=hypothetical protein;protein_id=YP_002346577.1;transl_table=11
NC_003143.1	RefSeq	STS	1784661	1786142	.	+	.	ID=id1082;Dbxref=UniSTS:474276;gbkey=STS
NC_003143.1	RefSeq	region	1784842	1784892	.	-	.	ID=id1083;Note=1 probable transmembrane helix predicted;Dbxref=GeneID:1174402;gbkey=misc_feature
NC_003143.1	RefSeq	gene	1785362	1786102	.	+	.	ID=gene1513;Name=YPO1565;Dbxref=GeneID:1174403;gbkey=Gene;locus_tag=YPO1565
NC_003143.1	RefSeq	CDS	1785362	1786102	.	+	0	ID=cds1450;Name=YP_002346578.1;Parent=gene1513;Dbxref=InterPro:IPR002198,InterPro:IPR002347,UniProtKB%2FTrEMBL:Q7CHS9,Genbank:YP_002346578.1,GeneID:1174403;gbkey=CDS;product=oxidoreductase;protein_id=YP_002346578.1;transl_table=11
NC_003143.1	RefSeq	region	1785749	1785835	.	+	.	ID=id1084;Note=PS00061 Short-chain dehydrogenases%2Freductases family signature.;Dbxref=GeneID:1174403;gbkey=misc_feature
NC_003143.1	RefSeq	gene	1786150	1786992	.	+	.	ID=gene1514;Name=YPO1566;Dbxref=GeneID:1174404;gbkey=Gene;locus_tag=YPO1566
NC_003143.1	RefSeq	CDS	1786150	1786992	.	+	0	ID=cds1451;Name=YP_002346579.1;Parent=gene1514;Dbxref=InterPro:IPR002529,UniProtKB%2FTrEMBL:Q7CHT0,Genbank:YP_002346579.1,GeneID:1174404;gbkey=CDS;product=hydrolase;protein_id=YP_002346579.1;transl_table=11
NC_003143.1	RefSeq	gene	1787024	1788301	.	+	.	ID=gene1515;Name=YPO1567;Dbxref=GeneID:1174405;gbkey=Gene;locus_tag=YPO1567
NC_003143.1	RefSeq	CDS	1787024	1788301	.	+	0	ID=cds1452;Name=YP_002346580.2;Parent=gene1515;Dbxref=InterPro:IPR001354,InterPro:IPR013342,UniProtKB%2FTrEMBL:Q0WGK8,Genbank:YP_002346580.2,GeneID:1174405;gbkey=CDS;product=racemase;protein_id=YP_002346580.2;transl_table=11
NC_003143.1	RefSeq	region	1787753	1787848	.	+	.	ID=id1085;Note=PS00909 Mandelate racemase %2F muconate lactonizing enzyme family signature 2.;Dbxref=GeneID:1174405;gbkey=misc_feature
NC_003143.1	RefSeq	gene	1788380	1788553	.	+	.	ID=gene1516;Name=YPO1568;Dbxref=GeneID:1174406;gbkey=Gene;locus_tag=YPO1568
NC_003143.1	RefSeq	CDS	1788380	1788553	.	+	0	ID=cds1453;Name=YP_002346581.1;Parent=gene1516;Note=No significant database hits;Dbxref=UniProtKB%2FTrEMBL:Q74V75,Genbank:YP_002346581.1,GeneID:1174406;gbkey=CDS;product=hypothetical protein;protein_id=YP_002346581.1;transl_table=11
NC_003143.1	RefSeq	gene	1788598	1789743	.	+	.	ID=gene1517;Name=lldD;Dbxref=GeneID:1174407;gbkey=Gene;gene=lldD;locus_tag=YPO1569
NC_003143.1	RefSeq	CDS	1788598	1789743	.	+	0	ID=cds1454;Name=YP_002346582.1;Parent=gene1517;Note=flavin mononucleotide-dependent dehydrogenase%3B functions in aerobic respiration and also has a role in anaerobic nitrate respiration;Dbxref=InterPro:IPR000262,InterPro:IPR008259,InterPro:IPR012133,UniProtKB%2FTrEMBL:Q0WGK6,Genbank:YP_002346582.1,GeneID:1174407;gbkey=CDS;gene=lldD;product=L-lactate dehydrogenase;protein_id=YP_002346582.1;transl_table=11
NC_003143.1	RefSeq	region	1789414	1789434	.	+	.	ID=id1086;Note=PS00557 FMN-dependent alpha-hydroxy acid dehydrogenases active site.;Dbxref=GeneID:1174407;gbkey=misc_feature;gene=lldD
NC_003143.1	RefSeq	gene	1789948	1791315	.	-	.	ID=gene1518;Name=argG;Dbxref=GeneID:1174408;gbkey=Gene;gene=argG;locus_tag=YPO1570
NC_003143.1	RefSeq	CDS	1789948	1791315	.	-	0	ID=cds1455;Name=YP_002346583.1;Parent=gene1518;Note=catalyzes the formation of arginosuccinate from citrulline and aspartate in arginine biosynthesis;Dbxref=InterPro:IPR001518,UniProtKB%2FTrEMBL:Q0WGK5,Genbank:YP_002346583.1,GeneID:1174408;gbkey=CDS;gene=argG;product=argininosuccinate synthase;protein_id=YP_002346583.1;transl_table=11
NC_003143.1	RefSeq	region	1790896	1790931	.	-	.	ID=id1087;Note=PS00565 Argininosuccinate synthase signature 2.;Dbxref=GeneID:1174408;gbkey=misc_feature;gene=argG
NC_003143.1	RefSeq	region	1791241	1791267	.	-	.	ID=id1088;Note=PS00564 Argininosuccinate synthase signature 1.;Dbxref=GeneID:1174408;gbkey=misc_feature;gene=argG
NC_003143.1	RefSeq	gene	1791609	1793039	.	+	.	ID=gene1519;Name=yeeO;Dbxref=GeneID:1174409;gbkey=Gene;gene=yeeO;locus_tag=YPO1571
NC_003143.1	RefSeq	CDS	1791609	1793039	.	+	0	ID=cds1456;Name=YP_002346584.1;Parent=gene1519;Dbxref=InterPro:IPR002528,UniProtKB%2FTrEMBL:Q7CHT2,Genbank:YP_002346584.1,GeneID:1174409;gbkey=CDS;gene=yeeO;product=hypothetical protein;protein_id=YP_002346584.1;transl_table=11
NC_003143.1	RefSeq	region	1792098	1792130	.	+	.	ID=id1089;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site.;Dbxref=GeneID:1174409;gbkey=misc_feature;gene=yeeO
NC_003143.1	RefSeq	gene	1793067	1794407	.	-	.	ID=gene1520;Name=YPO1572;Dbxref=GeneID:1174410;gbkey=Gene;locus_tag=YPO1572
NC_003143.1	RefSeq	CDS	1793067	1794407	.	-	0	ID=cds1457;Name=YP_002346585.1;Parent=gene1520;Dbxref=InterPro:IPR005829,InterPro:IPR007114,InterPro:IPR011701,UniProtKB%2FTrEMBL:Q7CHT3,Genbank:YP_002346585.1,GeneID:1174410;gbkey=CDS;product=sugar transporter;protein_id=YP_002346585.1;transl_table=11
NC_003143.1	RefSeq	region	1794123	1794173	.	-	.	ID=id1090;Note=PS00216 Sugar transport proteins signature 1.;Dbxref=GeneID:1174410;gbkey=misc_feature
NC_003143.1	RefSeq	gene	1794443	1795351	.	-	.	ID=gene1521;Name=YPO1573;Dbxref=GeneID:1174411;gbkey=Gene;locus_tag=YPO1573
NC_003143.1	RefSeq	CDS	1794443	1795351	.	-	0	ID=cds1458;Name=YP_002346586.1;Parent=gene1521;Dbxref=InterPro:IPR002509,UniProtKB%2FTrEMBL:Q0WGK2,Genbank:YP_002346586.1,GeneID:1174411;gbkey=CDS;product=polysaccharide deacetylase;protein_id=YP_002346586.1;transl_table=11
NC_003143.1	RefSeq	gene	1795901	1796596	.	+	.	ID=gene1522;Name=YPO1574;Dbxref=GeneID:1174412;gbkey=Gene;locus_tag=YPO1574
NC_003143.1	RefSeq	CDS	1795901	1796596	.	+	0	ID=cds1459;Name=YP_002346587.1;Parent=gene1522;Dbxref=UniProtKB%2FTrEMBL:Q7CHT4,Genbank:YP_002346587.1,GeneID:1174412;gbkey=CDS;product=hypothetical protein;protein_id=YP_002346587.1;transl_table=11
NC_003143.1	RefSeq	gene	1796713	1797225	.	+	.	ID=gene1523;Name=YPO1575;Dbxref=GeneID:1174413;gbkey=Gene;locus_tag=YPO1575
NC_003143.1	RefSeq	CDS	1796713	1797225	.	+	0	ID=cds1460;Name=YP_002346588.1;Parent=gene1523;Dbxref=UniProtKB%2FTrEMBL:Q74V69,Genbank:YP_002346588.1,GeneID:1174413;gbkey=CDS;product=hypothetical protein;protein_id=YP_002346588.1;transl_table=11
NC_003143.1	RefSeq	gene	1797571	1797646	.	-	.	ID=gene1524;Name=YPt_20;Dbxref=GeneID:1174414;gbkey=Gene;locus_tag=YPt_20
NC_003143.1	RefSeq	tRNA	1797571	1797646	.	-	.	ID=rna31;Parent=gene1524;Note=tRNA Asn anticodon GTT%2C Cove score 87.13;Dbxref=GeneID:1174414;gbkey=tRNA;product=tRNA-Asn
NC_003143.1	RefSeq	exon	1797571	1797646	.	-	.	ID=id1091;Parent=rna31;Note=tRNA Asn anticodon GTT%2C Cove score 87.13;Dbxref=GeneID:1174414;gbkey=tRNA;product=tRNA-Asn
NC_003143.1	RefSeq	gene	1798092	1798721	.	-	.	ID=gene1525;Name=YPO1576;Dbxref=GeneID:1174415;gbkey=Gene;locus_tag=YPO1576
NC_003143.1	RefSeq	CDS	1798092	1798721	.	-	0	ID=cds1461;Name=YP_002346589.1;Parent=gene1525;Dbxref=InterPro:IPR000792,InterPro:IPR001789,InterPro:IPR011006,InterPro:IPR011991,UniProtKB%2FTrEMBL:Q7CHT5,Genbank:YP_002346589.1,GeneID:1174415;gbkey=CDS;product=GerR family transcriptional regulator;protein_id=YP_002346589.1;transl_table=11
NC_003143.1	RefSeq	region	1798176	1798241	.	-	.	ID=id1092;Note=Predicted helix-turn-helix motif with score 1225 %28%2B3.36 SD%29 at aa 112-133%2C sequence ISVKALAEQLSLSHKTVHVHRA;Dbxref=GeneID:1174415;gbkey=misc_feature
NC_003143.1	RefSeq	gene	1798979	1800271	.	-	.	ID=gene1526;Name=YPO1577;Dbxref=GeneID:1174416;gbkey=Gene;locus_tag=YPO1577
NC_003143.1	RefSeq	CDS	1798979	1800271	.	-	0	ID=cds1462;Name=YP_002346590.1;Parent=gene1526;Dbxref=InterPro:IPR004681,InterPro:IPR010656,UniProtKB%2FTrEMBL:Q7CHT6,Genbank:YP_002346590.1,GeneID:1174416;gbkey=CDS;product=C4-dicarboxylate transporter large subunit;protein_id=YP_002346590.1;transl_table=11
NC_003143.1	RefSeq	gene	1800291	1800797	.	-	.	ID=gene1527;Name=YPO1578;Dbxref=GeneID:1174417;gbkey=Gene;locus_tag=YPO1578
NC_003143.1	RefSeq	CDS	1800291	1800797	.	-	0	ID=cds1463;Name=YP_002346591.1;Parent=gene1527;Dbxref=InterPro:IPR007387,UniProtKB%2FTrEMBL:Q7CHT7,Genbank:YP_002346591.1,GeneID:1174417;gbkey=CDS;product=C4-dicarboxylate transporter small subunit;protein_id=YP_002346591.1;transl_table=11
NC_003143.1	RefSeq	gene	1800921	1801913	.	-	.	ID=gene1528;Name=YPO1579;Dbxref=GeneID:1174418;gbkey=Gene;locus_tag=YPO1579
NC_003143.1	RefSeq	CDS	1800921	1801913	.	-	0	ID=cds1464;Name=YP_002346592.1;Parent=gene1528;Dbxref=InterPro:IPR004682,UniProtKB%2FTrEMBL:Q74V65,Genbank:YP_002346592.1,GeneID:1174418;gbkey=CDS;product=C4-dicarboxylate transporter substrate-binding protein;protein_id=YP_002346592.1;transl_table=11
NC_003143.1	RefSeq	gene	1802436	1803176	.	+	.	ID=gene1529;Name=YPO1580;Dbxref=GeneID:1174419;gbkey=Gene;locus_tag=YPO1580
NC_003143.1	RefSeq	CDS	1802436	1803176	.	+	0	ID=cds1465;Name=YP_002346593.1;Parent=gene1529;Dbxref=InterPro:IPR003542,InterPro:IPR008278,UniProtKB%2FTrEMBL:Q74V64,Genbank:YP_002346593.1,GeneID:1174419;gbkey=CDS;product=phosphopantetheinyl transferase;protein_id=YP_002346593.1;transl_table=11
NC_003143.1	RefSeq	gene	1803382	1803546	.	-	.	ID=gene1530;Name=YPO1580a;Dbxref=GeneID:16744754;gbkey=Gene;locus_tag=YPO1580a
NC_003143.1	RefSeq	CDS	1803382	1803546	.	-	0	ID=cds1466;Name=YP_008479702.1;Parent=gene1530;Dbxref=Genbank:YP_008479702.1,GeneID:16744754;gbkey=CDS;product=hypothetical protein;protein_id=YP_008479702.1;transl_table=11
NC_003143.1	RefSeq	gene	1803563	1805689	.	-	.	ID=gene1531;Name=rafA;Dbxref=GeneID:1174420;gbkey=Gene;gene=rafA;locus_tag=YPO1581
NC_003143.1	RefSeq	CDS	1803563	1805689	.	-	0	ID=cds1467;Name=YP_002346594.1;Parent=gene1531;Dbxref=InterPro:IPR000111,InterPro:IPR002252,InterPro:IPR013781,UniProtKB%2FTrEMBL:Q0WGJ4,Genbank:YP_002346594.1,GeneID:1174420;gbkey=CDS;gene=rafA;product=alpha-galactosidase;protein_id=YP_002346594.1;transl_table=11
NC_003143.1	RefSeq	region	1804676	1804723	.	-	.	ID=id1093;Note=PS00512 Alpha-galactosidase signature.;Dbxref=GeneID:1174420;gbkey=misc_feature;gene=rafA
NC_003143.1	RefSeq	gene	1805767	1807011	.	-	.	ID=gene1532;Name=lacY;Dbxref=GeneID:1174421;gbkey=Gene;gene=lacY;gene_synonym=lacY;locus_tag=YPO1582
NC_003143.1	RefSeq	CDS	1805767	1807011	.	-	0	ID=cds1468;Name=YP_008479703.1;Parent=gene1532;Dbxref=Genbank:YP_008479703.1,GeneID:1174421;gbkey=CDS;gene=lacY;product=galactoside permease;protein_id=YP_008479703.1;transl_table=11
NC_003143.1	RefSeq	repeat_region	1806998	1808312	.	+	.	ID=id1094;Note=insertion sequence:IS285;gbkey=repeat_region;gene=lacY
NC_003143.1	RefSeq	repeat_region	1806998	1807026	.	+	.	ID=id1095;Note=IS285 inverted repeat;gbkey=repeat_region;gene=lacY
NC_003143.1	RefSeq	gene	1807069	1808277	.	+	.	ID=gene1533;Name=y1062;Dbxref=GeneID:1174422;gbkey=Gene;gene=y1062;gene_synonym=ypmt1.80C;locus_tag=YPO1583
NC_003143.1	RefSeq	CDS	1807069	1808277	.	+	0	ID=cds1469;Name=YP_002346595.1;Parent=gene1533;Dbxref=InterPro:IPR001207,UniProtKB%2FTrEMBL:Q7ARB0,Genbank:YP_002346595.1,GeneID:1174422;gbkey=CDS;gene=y1062;product=transposase for the IS285 insertion element;protein_id=YP_002346595.1;transl_table=11
NC_003143.1	RefSeq	region	1807762	1807836	.	+	.	ID=id1096;Note=PS01007 Transposases%2C Mutator family%2C signature.;Dbxref=GeneID:1174422;gbkey=misc_feature;gene=y1062
NC_003143.1	RefSeq	gene	1808240	1808536	.	-	.	ID=gene1534;Name=YPO1583a;Dbxref=GeneID:16744755;gbkey=Gene;locus_tag=YPO1583a
NC_003143.1	RefSeq	CDS	1808240	1808536	.	-	0	ID=cds1470;Name=YP_008479704.1;Parent=gene1534;Dbxref=Genbank:YP_008479704.1,GeneID:16744755;gbkey=CDS;product=biofilm formation regulatory protein BssS;protein_id=YP_008479704.1;transl_table=11
NC_003143.1	RefSeq	repeat_region	1808284	1808312	.	-	.	ID=id1097;Note=IS285 inverted repeat;Dbxref=GeneID:16744755;gbkey=repeat_region
NC_003143.1	RefSeq	gene	1808315	1808536	.	-	.	ID=gene1535;Name=YPO1584;Dbxref=GeneID:1174423;gbkey=Gene;locus_tag=YPO1584;pseudo=true
NC_003143.1	RefSeq	region	1808315	1808536	.	-	.	ID=id1098;Note=This CDS is disrupted by the insertion of IS285 element. This insertion occurred near the C-terminal end %28following codon 74%29%2C replacing the C-terminal 10 aa with 24 aa encoded within the IS element. It is not clear whether this insertion affects the function of the protein. Similar to Escherichia coli hypothetical 9.7 kDa protein in solA-dinI intergenic region YceP or B1060 SW:YCEP_ECOLI %28P75927%29 %2884 aa%29 fasta scores: E%28%29: 1e-20%2C 72.603%25 id in 73 aa;Dbxref=GeneID:1174423;gbkey=misc_feature;pseudo=true
NC_003143.1	RefSeq	gene	1808703	1808843	.	+	.	ID=gene1536;Name=YPO1585;Dbxref=GeneID:1174424;gbkey=Gene;locus_tag=YPO1585
NC_003143.1	RefSeq	CDS	1808703	1808843	.	+	0	ID=cds1471;Name=YP_002346596.1;Parent=gene1536;Note=No significant database hits;Dbxref=UniProtKB%2FTrEMBL:Q0WGJ2,Genbank:YP_002346596.1,GeneID:1174424;gbkey=CDS;product=hypothetical protein;protein_id=YP_002346596.1;transl_table=11
NC_003143.1	RefSeq	gene	1809042	1809287	.	-	.	ID=gene1537;Name=dinI;Dbxref=GeneID:1174425;gbkey=Gene;gene=dinI;locus_tag=YPO1586
NC_003143.1	RefSeq	CDS	1809042	1809287	.	-	0	ID=cds1472;Name=YP_002346597.1;Parent=gene1537;Dbxref=InterPro:IPR010391,UniProtKB%2FTrEMBL:Q74TC1,Genbank:YP_002346597.1,GeneID:1174425;gbkey=CDS;gene=dinI;product=DNA damage-inducible protein I;protein_id=YP_002346597.1;transl_table=11
NC_003143.1	RefSeq	gene	1809600	1810646	.	-	.	ID=gene1538;Name=pyrC;Dbxref=GeneID:1174426;gbkey=Gene;gene=pyrC;locus_tag=YPO1587
NC_003143.1	RefSeq	CDS	1809600	1810646	.	-	0	ID=cds1473;Name=YP_002346598.1;Parent=gene1538;Note=catalyzes the formation of N-carbamoyl-L-aspartate from %28S%29-dihydroorotate in pyrimidine biosynthesis;Dbxref=InterPro:IPR002195,InterPro:IPR004721,InterPro:IPR006680,UniProtKB%2FTrEMBL:Q0WGJ0,Genbank:YP_002346598.1,GeneID:1174426;gbkey=CDS;gene=pyrC;product=dihydroorotase;protein_id=YP_002346598.1;transl_table=11
NC_003143.1	RefSeq	region	1809867	1809902	.	-	.	ID=id1099;Note=PS00483 Dihydroorotase signature 2.;Dbxref=GeneID:1174426;gbkey=misc_feature;gene=pyrC
NC_003143.1	RefSeq	gene	1810881	1811168	.	+	.	ID=gene1539;Name=YPO1588;Dbxref=GeneID:1174427;gbkey=Gene;locus_tag=YPO1588
NC_003143.1	RefSeq	CDS	1810881	1811168	.	+	0	ID=cds1474;Name=YP_002346599.1;Parent=gene1539;Dbxref=InterPro:IPR007138,InterPro:IPR011008,UniProtKB%2FTrEMBL:Q7CJ27,Genbank:YP_002346599.1,GeneID:1174427;gbkey=CDS;product=hypothetical protein;protein_id=YP_002346599.1;transl_table=11
NC_003143.1	RefSeq	repeat_region	1811410	1812724	.	-	.	ID=id1100;Note=insertion sequence:IS285;gbkey=repeat_region
NC_003143.1	RefSeq	repeat_region	1811410	1811438	.	+	.	ID=id1101;Note=IS285 inverted repeat;gbkey=repeat_region
NC_003143.1	RefSeq	gene	1811445	1812653	.	-	.	ID=gene1540;Name=y1062;Dbxref=GeneID:1174428;gbkey=Gene;gene=y1062;gene_synonym=ypmt1.80C;locus_tag=YPO1589
NC_003143.1	RefSeq	CDS	1811445	1812653	.	-	0	ID=cds1475;Name=YP_002346600.1;Parent=gene1540;Dbxref=InterPro:IPR001207,UniProtKB%2FTrEMBL:Q7ARB0,Genbank:YP_002346600.1,GeneID:1174428;gbkey=CDS;gene=y1062;product=transposase for the IS285 insertion element;protein_id=YP_002346600.1;transl_table=11
NC_003143.1	RefSeq	region	1811886	1811960	.	-	.	ID=id1102;Note=PS01007 Transposases%2C Mutator family%2C signature.;Dbxref=GeneID:1174428;gbkey=misc_feature;gene=y1062
NC_003143.1	RefSeq	repeat_region	1812696	1812724	.	-	.	ID=id1103;Note=IS285 inverted repeat;gbkey=repeat_region
NC_003143.1	RefSeq	gene	1812749	1816414	.	-	.	ID=gene1541;Name=rne;Dbxref=GeneID:1174429;gbkey=Gene;gene=rne;gene_synonym=hmp1,rne;locus_tag=YPO1590
NC_003143.1	RefSeq	CDS	1812749	1816414	.	-	0	ID=cds1476;Name=YP_002346601.1;Parent=gene1541;Note=bifunctional ribonuclease E%2Fendoribonuclease%2FRNA-binding protein%2FRNA degradosome binding protein%3B forms part of the membrane-associated degradosome complex along with PNPase%2C RhlB%2C and enolase;Dbxref=InterPro:IPR003029,InterPro:IPR004659,InterPro:IPR008994,InterPro:IPR012340,UniProtKB%2FTrEMBL:Q74TC3,Genbank:YP_002346601.1,GeneID:1174429;gbkey=CDS;gene=rne;product=ribonuclease E;protein_id=YP_002346601.1;transl_table=11
NC_003143.1	RefSeq	gene	1816989	1817951	.	+	.	ID=gene1542;Name=rluC;Dbxref=GeneID:1174430;gbkey=Gene;gene=rluC;locus_tag=YPO1591
NC_003143.1	RefSeq	CDS	1816989	1817951	.	+	0	ID=cds1477;Name=YP_002346602.1;Parent=gene1542;Note=catalyzes the transformation of uracil to pseudouracil at nucleotides U955%2C U2504%2C and U2580 in 23S rRNA;Dbxref=InterPro:IPR002942,InterPro:IPR006145,InterPro:IPR006224,InterPro:IPR006225,UniProtKB%2FTrEMBL:Q0WGI6,Genbank:YP_002346602.1,GeneID:1174430;gbkey=CDS;gene=rluC;product=23S rRNA pseudouridylate synthase C;protein_id=YP_002346602.1;transl_table=11
NC_003143.1	RefSeq	region	1817406	1817450	.	+	.	ID=id1104;Note=PS01129 Rlu family of pseudouridine synthase signature.;Dbxref=GeneID:1174430;gbkey=misc_feature;gene=rluC
NC_003143.1	RefSeq	repeat_region	1818026	1818737	.	+	.	ID=id1105;Note=Contains a %27A%27 at nucleotide position 315%7EIS200-like insertion sequence:IS1541;gbkey=repeat_region
NC_003143.1	RefSeq	gene	1818171	1818629	.	+	.	ID=gene1543;Name=tnp;Dbxref=GeneID:1174431;gbkey=Gene;gene=tnp;locus_tag=YPO1592
NC_003143.1	RefSeq	CDS	1818171	1818629	.	+	0	ID=cds1478;Name=YP_002346603.1;Parent=gene1543;Dbxref=InterPro:IPR002686,UniProtKB%2FTrEMBL:Q56938,Genbank:YP_002346603.1,GeneID:1174431;gbkey=CDS;gene=tnp;product=transposase for the IS1541 insertion element;protein_id=YP_002346603.1;transl_table=11
NC_003143.1	RefSeq	gene	1818784	1819380	.	-	.	ID=gene1544;Name=maf;Dbxref=GeneID:1174432;gbkey=Gene;gene=maf;locus_tag=YPO1593
NC_003143.1	RefSeq	CDS	1818784	1819380	.	-	0	ID=cds1479;Name=YP_002346604.1;Parent=gene1544;Note=Maf%3B overexpression in Bacillus subtilis inhibits septation in the dividing cell;Dbxref=InterPro:IPR003697,UniProtKB%2FTrEMBL:Q0WGI4,Genbank:YP_002346604.1,GeneID:1174432;gbkey=CDS;gene=maf;product=Maf-like protein;protein_id=YP_002346604.1;transl_table=11
NC_003143.1	RefSeq	gene	1819522	1820046	.	+	.	ID=gene1545;Name=YPO1594;Dbxref=GeneID:1174433;gbkey=Gene;locus_tag=YPO1594
NC_003143.1	RefSeq	CDS	1819522	1820046	.	+	0	ID=cds1480;Name=YP_002346605.1;Parent=gene1545;Dbxref=InterPro:IPR003772,UniProtKB%2FTrEMBL:Q7CJ25,Genbank:YP_002346605.1,GeneID:1174433;gbkey=CDS;product=hypothetical protein;protein_id=YP_002346605.1;transl_table=11
NC_003143.1	RefSeq	gene	1820059	1820226	.	+	.	ID=gene1546;Name=rpmF;Dbxref=GeneID:1174434;gbkey=Gene;gene=rpmF;locus_tag=YPO1595
NC_003143.1	RefSeq	CDS	1820059	1820226	.	+	0	ID=cds1481;Name=YP_002346606.1;Parent=gene1546;Note=some L32 proteins have zinc finger motifs consisting of CXXC while others do not;Dbxref=InterPro:IPR002677,UniProtKB%2FTrEMBL:Q0WGI2,Genbank:YP_002346606.1,GeneID:1174434;gbkey=CDS;gene=rpmF;product=50S ribosomal protein L32;protein_id=YP_002346606.1;transl_table=11
NC_003143.1	RefSeq	gene	1820260	1821294	.	+	.	ID=gene1547;Name=plsX;Dbxref=GeneID:1174435;gbkey=Gene;gene=plsX;locus_tag=YPO1596
NC_003143.1	RefSeq	CDS	1820260	1821294	.	+	0	ID=cds1482;Name=YP_002346607.1;Parent=gene1547;Note=involved in acylation of glycerol-3-phosphate to form 1-acyl-glycerol-3 phosphate for use in phospholipid biosynthesis%3B functions with PlsY;Dbxref=InterPro:IPR003664,InterPro:IPR012281,UniProtKB%2FTrEMBL:Q0WGI1,Genbank:YP_002346607.1,GeneID:1174435;gbkey=CDS;gene=plsX;product=glycerol-3-phosphate acyltransferase PlsX;protein_id=YP_002346607.1;transl_table=11
NC_003143.1	RefSeq	gene	1821301	1822251	.	+	.	ID=gene1548;Name=fabH;Dbxref=GeneID:1174436;gbkey=Gene;gene=fabH;locus_tag=YPO1597
NC_003143.1	RefSeq	CDS	1821301	1822251	.	+	0	ID=cds1483;Name=YP_002346608.1;Parent=gene1548;Note=FabH%3B beta-ketoacyl-acyl carrier protein synthase III%3B catalyzes the condensation of acetyl-CoA with malonyl-ACP to initiate cycles of fatty acid elongation%3B differs from 3-oxoacyl-%28acyl carrier protein%29 synthase I and II in that it utilizes CoA thioesters as primers rather than acyl-ACPs;Dbxref=InterPro:IPR004655,InterPro:IPR013747,InterPro:IPR013751,UniProtKB%2FTrEMBL:Q0WGI0,Genbank:YP_002346608.1,GeneID:1174436;gbkey=CDS;gene=fabH;product=3-oxoacyl-ACP synthase;protein_id=YP_002346608.1;transl_table=11
NC_003143.1	RefSeq	gene	1822289	1823218	.	+	.	ID=gene1549;Name=fabD;Dbxref=GeneID:1174437;gbkey=Gene;gene=fabD;gene_synonym=tfpA;locus_tag=YPO1598
NC_003143.1	RefSeq	CDS	1822289	1823218	.	+	0	ID=cds1484;Name=YP_002346609.1;Parent=gene1549;Dbxref=InterPro:IPR001227,InterPro:IPR004410,UniProtKB%2FTrEMBL:Q7CJ24,Genbank:YP_002346609.1,GeneID:1174437;gbkey=CDS;gene=fabD;product=malonyl CoA-ACP transacylase;protein_id=YP_002346609.1;transl_table=11
NC_003143.1	RefSeq	gene	1823232	1823966	.	+	.	ID=gene1550;Name=fabG;Dbxref=GeneID:1174438;gbkey=Gene;gene=fabG;locus_tag=YPO1599
NC_003143.1	RefSeq	CDS	1823232	1823966	.	+	0	ID=cds1485;Name=YP_002346610.1;Parent=gene1550;Note=catalyzes the first of the two reduction steps in the elongation cycle of fatty acid synthesis;Dbxref=InterPro:IPR002198,InterPro:IPR002347,InterPro:IPR011284,UniProtKB%2FTrEMBL:Q7CJ23,Genbank:YP_002346610.1,GeneID:1174438;gbkey=CDS;gene=fabG;product=3-ketoacyl-ACP reductase;protein_id=YP_002346610.1;transl_table=11
NC_003143.1	RefSeq	region	1823643	1823729	.	+	.	ID=id1106;Note=PS00061 Short-chain dehydrogenases%2Freductases family signature.;Dbxref=GeneID:1174438;gbkey=misc_feature;gene=fabG
NC_003143.1	RefSeq	gene	1824120	1824356	.	+	.	ID=gene1551;Name=acpP;Dbxref=GeneID:1174439;gbkey=Gene;gene=acpP;locus_tag=YPO1600
NC_003143.1	RefSeq	CDS	1824120	1824356	.	+	0	ID=cds1486;Name=YP_002346611.1;Parent=gene1551;Note=carries the fatty acid chain in fatty acid biosynthesis;Dbxref=InterPro:IPR003231,InterPro:IPR006162,InterPro:IPR006163,InterPro:IPR009081,UniProtKB%2FTrEMBL:Q0WGH7,Genbank:YP_002346611.1,GeneID:1174439;gbkey=CDS;gene=acpP;product=acyl carrier protein;protein_id=YP_002346611.1;transl_table=11
NC_003143.1	RefSeq	region	1824213	1824260	.	+	.	ID=id1107;Note=PS00012 Phosphopantetheine attachment site.;Dbxref=GeneID:1174439;gbkey=misc_feature;gene=acpP
NC_003143.1	RefSeq	gene	1824451	1825692	.	+	.	ID=gene1552;Name=fabF;Dbxref=GeneID:1174440;gbkey=Gene;gene=fabF;gene_synonym=fabJ;locus_tag=YPO1601
NC_003143.1	RefSeq	CDS	1824451	1825692	.	+	0	ID=cds1487;Name=YP_002346612.1;Parent=gene1552;Note=FabF%3B beta-ketoacyl-ACP synthase II%2C KASII%3B catalyzes a condensation reaction in fatty acid biosynthesis: addition of an acyl acceptor of two carbons from malonyl-ACP%3B required for the elongation of short-chain unsaturated acyl-ACP;Dbxref=InterPro:IPR000794,UniProtKB%2FTrEMBL:Q7CJ22,Genbank:YP_002346612.1,GeneID:1174440;gbkey=CDS;gene=fabF;product=3-oxoacyl-ACP synthase;protein_id=YP_002346612.1;transl_table=11
NC_003143.1	RefSeq	region	1824913	1824963	.	+	.	ID=id1108;Note=PS00606 Beta-ketoacyl synthases active site.;Dbxref=GeneID:1174440;gbkey=misc_feature;gene=fabF
NC_003143.1	RefSeq	repeat_region	1825747	1826458	.	+	.	ID=id1109;Note=Contains a %27G%27 at nucleotide position 315%7EIS200-like insertion sequence:IS1541;gbkey=repeat_region
NC_003143.1	RefSeq	gene	1825892	1826350	.	+	.	ID=gene1553;Name=tnp;Dbxref=GeneID:1174441;gbkey=Gene;gene=tnp;locus_tag=YPO1602
NC_003143.1	RefSeq	CDS	1825892	1826350	.	+	0	ID=cds1488;Name=YP_002346613.1;Parent=gene1553;Dbxref=InterPro:IPR002686,UniProtKB%2FTrEMBL:Q74YM6,Genbank:YP_002346613.1,GeneID:1174441;gbkey=CDS;gene=tnp;product=transposase for the IS1541 insertion element;protein_id=YP_002346613.1;transl_table=11
NC_003143.1	RefSeq	gene	1826766	1827572	.	+	.	ID=gene1554;Name=pabC;Dbxref=GeneID:1174442;gbkey=Gene;gene=pabC;locus_tag=YPO1603
NC_003143.1	RefSeq	CDS	1826766	1827572	.	+	0	ID=cds1489;Name=YP_002346614.1;Parent=gene1554;Note=catalyzes the formation of 4-aminobenzoate and pyruvate from 4-amino-4-deoxychorismate;Dbxref=InterPro:IPR001544,UniProtKB%2FTrEMBL:Q7CJ20,Genbank:YP_002346614.1,GeneID:1174442;gbkey=CDS;gene=pabC;product=4-amino-4-deoxychorismate lyase;protein_id=YP_002346614.1;transl_table=11
NC_003143.1	RefSeq	region	1827282	1827371	.	+	.	ID=id1110;Note=PS00770 Aminotransferases class-IV signature.;Dbxref=GeneID:1174442;gbkey=misc_feature;gene=pabC
NC_003143.1	RefSeq	gene	1827861	1828886	.	+	.	ID=gene1555;Name=yceG;Dbxref=GeneID:1174443;gbkey=Gene;gene=yceG;locus_tag=YPO1604
NC_003143.1	RefSeq	CDS	1827861	1828886	.	+	0	ID=cds1490;Name=YP_002346615.1;Parent=gene1555;Dbxref=InterPro:IPR003770,UniProtKB%2FTrEMBL:Q74TD0,Genbank:YP_002346615.1,GeneID:1174443;gbkey=CDS;gene=yceG;product=hypothetical protein;protein_id=YP_002346615.1;transl_table=11
NC_003143.1	RefSeq	gene	1828876	1829514	.	+	.	ID=gene1556;Name=tmk;Dbxref=GeneID:1174444;gbkey=Gene;gene=tmk;locus_tag=YPO1605
NC_003143.1	RefSeq	CDS	1828876	1829514	.	+	0	ID=cds1491;Name=YP_002346616.1;Parent=gene1556;Note=catalyzes the reversible phosphoryl transfer from adenosine triphosphate %28ATP%29 to thymidine monophosphate %28dTMP%29 to form thymidine diphosphate %28dTDP%29;Dbxref=InterPro:IPR000062,UniProtKB%2FTrEMBL:Q0WGH2,Genbank:YP_002346616.1,GeneID:1174444;gbkey=CDS;gene=tmk;product=thymidylate kinase;protein_id=YP_002346616.1;transl_table=11
NC_003143.1	RefSeq	region	1828903	1828926	.	+	.	ID=id1111;Note=PS00017 ATP%2FGTP-binding site motif A %28P-loop%29.;Dbxref=GeneID:1174444;gbkey=misc_feature;gene=tmk
NC_003143.1	RefSeq	region	1829158	1829196	.	+	.	ID=id1112;Note=PS01331 Thymidylate kinase signature.;Dbxref=GeneID:1174444;gbkey=misc_feature;gene=tmk
NC_003143.1	RefSeq	gene	1829514	1830536	.	+	.	ID=gene1557;Name=holB;Dbxref=GeneID:1174445;gbkey=Gene;gene=holB;locus_tag=YPO1606
NC_003143.1	RefSeq	CDS	1829514	1830536	.	+	0	ID=cds1492;Name=YP_002346617.1;Parent=gene1557;Note=catalyzes the DNA-template-directed extension of the 3%27-end of a DNA strand%3B the delta%27 subunit seems to interact with the gamma subunit to transfer the beta subunit on the DNA;Dbxref=InterPro:IPR004622,InterPro:IPR008921,UniProtKB%2FTrEMBL:Q0WGH1,Genbank:YP_002346617.1,GeneID:1174445;gbkey=CDS;gene=holB;product=DNA polymerase III subunit delta%27;protein_id=YP_002346617.1;transl_table=11
NC_003143.1	RefSeq	region	1829688	1829705	.	+	.	ID=id1113;Note=PS00190 Cytochrome c family heme-binding site signature.;Dbxref=GeneID:1174445;gbkey=misc_feature;gene=holB
NC_003143.1	RefSeq	gene	1830551	1831360	.	+	.	ID=gene1558;Name=YPO1607;Dbxref=GeneID:1174446;gbkey=Gene;locus_tag=YPO1607
NC_003143.1	RefSeq	CDS	1830551	1831360	.	+	0	ID=cds1493;Name=YP_002346618.1;Parent=gene1558;Dbxref=InterPro:IPR001130,InterPro:IPR012278,UniProtKB%2FTrEMBL:Q7CJ19,Genbank:YP_002346618.1,GeneID:1174446;gbkey=CDS;product=metallodependent hydrolase;protein_id=YP_002346618.1;transl_table=11
NC_003143.1	RefSeq	region	1830557	1830583	.	+	.	ID=id1114;Note=PS01137 Uncharacterized protein family UPF0006 signature 1.;Dbxref=GeneID:1174446;gbkey=misc_feature
NC_003143.1	RefSeq	region	1830926	1830958	.	+	.	ID=id1115;Note=PS01090 Uncharacterized protein family UPF0006 signature 2.;Dbxref=GeneID:1174446;gbkey=misc_feature
NC_003143.1	RefSeq	region	1831121	1831171	.	+	.	ID=id1116;Note=PS01091 Uncharacterized protein family UPF0006 signature 3.;Dbxref=GeneID:1174446;gbkey=misc_feature
NC_003143.1	RefSeq	gene	1831666	1833099	.	+	.	ID=gene1559;Name=ptsG;Dbxref=GeneID:1174447;gbkey=Gene;gene=ptsG;gene_synonym=umG;locus_tag=YPO1608
NC_003143.1	RefSeq	CDS	1831666	1833099	.	+	0	ID=cds1494;Name=YP_002346619.1;Parent=gene1559;Note=phosphoenolpyruvate-dependent sugar phosphotransferase system%3B catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane%3B IIB is phosphorylated by IIA and then transfers the phosphoryl group to the sugar%3B IIC forms the translocation channel;Dbxref=InterPro:IPR001996,InterPro:IPR003352,InterPro:IPR004719,InterPro:IPR011299,InterPro:IPR011535,InterPro:IPR013013,UniProtKB%2FTrEMBL:Q7CJ18,Genbank:YP_002346619.1,GeneID:1174447;gbkey=CDS;gene=ptsG;product=PTS system glucose-specific transporter subunits IIBC;protein_id=YP_002346619.1;transl_table=11
NC_003143.1	RefSeq	region	1832905	1832958	.	+	.	ID=id1117;Note=PS01035 PTS EIIB domains cysteine phosphorylation site signature.;Dbxref=GeneID:1174447;gbkey=misc_feature;gene=ptsG
NC_003143.1	RefSeq	repeat_region	1833144	1833855	.	+	.	ID=id1118;Note=Contains a %27A%27 at nucleotide position 315%7EIS200-like insertion sequence:IS1541;gbkey=repeat_region
NC_003143.1	RefSeq	gene	1833289	1833747	.	+	.	ID=gene1560;Name=tnp;Dbxref=GeneID:1174448;gbkey=Gene;gene=tnp;locus_tag=YPO1609
NC_003143.1	RefSeq	CDS	1833289	1833747	.	+	0	ID=cds1495;Name=YP_002346620.1;Parent=gene1560;Dbxref=InterPro:IPR002686,UniProtKB%2FTrEMBL:Q56938,Genbank:YP_002346620.1,GeneID:1174448;gbkey=CDS;gene=tnp;product=transposase for the IS1541 insertion element;protein_id=YP_002346620.1;transl_table=11
NC_003143.1	RefSeq	gene	1834190	1835008	.	+	.	ID=gene1561;Name=aroE;Dbxref=GeneID:1174449;gbkey=Gene;gene=aroE;locus_tag=YPO1610
NC_003143.1	RefSeq	CDS	1834190	1835008	.	+	0	ID=cds1496;Name=YP_002346621.1;Parent=gene1561;Note=catalyzes the conversion of shikimate to 3-dehydroshikimate;Dbxref=InterPro:IPR006151,InterPro:IPR013708,UniProtKB%2FTrEMBL:Q7CJ16,Genbank:YP_002346621.1,GeneID:1174449;gbkey=CDS;gene=aroE;product=shikimate 5-dehydrogenase;protein_id=YP_002346621.1;transl_table=11
NC_003143.1	RefSeq	gene	1835182	1835535	.	+	.	ID=gene1562;Name=YPO1611;Dbxref=GeneID:1174450;gbkey=Gene;locus_tag=YPO1611
NC_003143.1	RefSeq	CDS	1835182	1835535	.	+	0	ID=cds1497;Name=YP_002346622.1;Parent=gene1562;Dbxref=InterPro:IPR001310,UniProtKB%2FTrEMBL:Q7CJ15,Genbank:YP_002346622.1,GeneID:1174450;gbkey=CDS;product=purine nucleoside phosphoramidase;protein_id=YP_002346622.1;transl_table=11
NC_003143.1	RefSeq	region	1835443	1835499	.	+	.	ID=id1119;Note=PS00892 HIT family signature.;Dbxref=GeneID:1174450;gbkey=misc_feature
NC_003143.1	RefSeq	gene	1835570	1835959	.	+	.	ID=gene1563;Name=ycfL;Dbxref=GeneID:1174451;gbkey=Gene;gene=ycfL;locus_tag=YPO1612
NC_003143.1	RefSeq	CDS	1835570	1835959	.	+	0	ID=cds1498;Name=YP_002346623.1;Parent=gene1563;Dbxref=InterPro:IPR010824,InterPro:IPR013838,UniProtKB%2FTrEMBL:Q0WGG5,Genbank:YP_002346623.1,GeneID:1174451;gbkey=CDS;gene=ycfL;product=lipoprotein;protein_id=YP_002346623.1;transl_table=11
NC_003143.1	RefSeq	region	1835570	1835581	.	+	.	ID=id1120;Note=PS00228 Tubulin-beta mRNA autoregulation signal.;Dbxref=GeneID:1174451;gbkey=misc_feature;gene=ycfL
NC_003143.1	RefSeq	region	1835585	1835617	.	+	.	ID=id1121;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site.;Dbxref=GeneID:1174451;gbkey=misc_feature;gene=ycfL
NC_003143.1	RefSeq	gene	1836000	1836575	.	+	.	ID=gene1564;Name=YPO1613;Dbxref=GeneID:1174452;gbkey=Gene;locus_tag=YPO1613
NC_003143.1	RefSeq	CDS	1836000	1836575	.	+	0	ID=cds1499;Name=YP_002346624.1;Parent=gene1564;Dbxref=UniProtKB%2FTrEMBL:Q7CJ14,Genbank:YP_002346624.1,GeneID:1174452;gbkey=CDS;product=lipoprotein;protein_id=YP_002346624.1;transl_table=11
NC_003143.1	RefSeq	region	1836018	1836050	.	+	.	ID=id1122;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site.;Dbxref=GeneID:1174452;gbkey=misc_feature
NC_003143.1	RefSeq	gene	1836616	1837422	.	+	.	ID=gene1565;Name=YPO1614;Dbxref=GeneID:1174453;gbkey=Gene;locus_tag=YPO1614
NC_003143.1	RefSeq	CDS	1836616	1837422	.	+	0	ID=cds1500;Name=YP_002346625.1;Parent=gene1565;Dbxref=InterPro:IPR002575,InterPro:IPR011009,UniProtKB%2FTrEMBL:Q0WGG3,Genbank:YP_002346625.1,GeneID:1174453;gbkey=CDS;product=hypothetical protein;protein_id=YP_002346625.1;transl_table=11
NC_003143.1	RefSeq	gene	1837493	1838524	.	+	.	ID=gene1566;Name=ycfO;Dbxref=GeneID:1174454;gbkey=Gene;gene=ycfO;locus_tag=YPO1615
NC_003143.1	RefSeq	CDS	1837493	1838524	.	+	0	ID=cds1501;Name=YP_002346626.1;Parent=gene1566;Note=hydrolyzes the terminal non-reducing N-acetyl-D-hexosamine residues in N-acetyl-beta-D-hexosaminides;Dbxref=InterPro:IPR001764,UniProtKB%2FTrEMBL:Q0WGG2,Genbank:YP_002346626.1,GeneID:1174454;gbkey=CDS;gene=ycfO;product=beta-hexosaminidase;protein_id=YP_002346626.1;transl_table=11
NC_003143.1	RefSeq	region	1838192	1838245	.	+	.	ID=id1123;Note=PS00775 Glycosyl hydrolases family 3 active site.;Dbxref=GeneID:1174454;gbkey=misc_feature;gene=ycfO
NC_003143.1	RefSeq	gene	1838652	1839194	.	+	.	ID=gene1567;Name=YPO1616;Dbxref=GeneID:1174455;gbkey=Gene;locus_tag=YPO1616
NC_003143.1	RefSeq	CDS	1838652	1839194	.	+	0	ID=cds1502;Name=YP_002346627.1;Parent=gene1567;Dbxref=InterPro:IPR008886,UniProtKB%2FTrEMBL:Q0WGG1,Genbank:YP_002346627.1,GeneID:1174455;gbkey=CDS;product=hypothetical protein;protein_id=YP_002346627.1;transl_table=11
NC_003143.1	RefSeq	gene	1839569	1840873	.	+	.	ID=gene1568;Name=ndh;Dbxref=GeneID:1174456;gbkey=Gene;gene=ndh;locus_tag=YPO1617
NC_003143.1	RefSeq	CDS	1839569	1840873	.	+	0	ID=cds1503;Name=YP_002346628.1;Parent=gene1568;Dbxref=InterPro:IPR001100,InterPro:IPR001327,InterPro:IPR002110,InterPro:IPR013027,UniProtKB%2FTrEMBL:Q7CJ13,Genbank:YP_002346628.1,GeneID:1174456;gbkey=CDS;gene=ndh;product=NADH dehydrogenase;protein_id=YP_002346628.1;transl_table=11
NC_003143.1	RefSeq	gene	1841276	1841980	.	+	.	ID=gene1569;Name=YPO1619;Dbxref=GeneID:1174458;gbkey=Gene;locus_tag=YPO1619;pseudo=true
NC_003143.1	RefSeq	gene	1841988	1842401	.	+	.	ID=gene1570;Name=YPO1620;Dbxref=GeneID:1174459;gbkey=Gene;locus_tag=YPO1620
NC_003143.1	RefSeq	CDS	1841988	1842401	.	+	0	ID=cds1504;Name=YP_002346631.1;Parent=gene1570;Note=No significant database hits;Dbxref=UniProtKB%2FTrEMBL:Q7CJ10,Genbank:YP_002346631.1,GeneID:1174459;gbkey=CDS;product=hypothetical protein;protein_id=YP_002346631.1;transl_table=11
NC_003143.1	RefSeq	repeat_region	1842426	1843740	.	+	.	ID=id1124;Note=insertion sequence:IS285;gbkey=repeat_region
NC_003143.1	RefSeq	repeat_region	1842426	1842454	.	+	.	ID=id1125;Note=IS285 inverted repeat;gbkey=repeat_region
NC_003143.1	RefSeq	gene	1842497	1843705	.	+	.	ID=gene1571;Name=y1062;Dbxref=GeneID:1174460;gbkey=Gene;gene=y1062;gene_synonym=ypmt1.80C;locus_tag=YPO1621
NC_003143.1	RefSeq	CDS	1842497	1843705	.	+	0	ID=cds1505;Name=YP_002346632.1;Parent=gene1571;Dbxref=InterPro:IPR001207,UniProtKB%2FTrEMBL:Q7ARB0,Genbank:YP_002346632.1,GeneID:1174460;gbkey=CDS;gene=y1062;product=transposase for the IS285 insertion element;protein_id=YP_002346632.1;transl_table=11
NC_003143.1	RefSeq	region	1843190	1843264	.	+	.	ID=id1126;Note=PS01007 Transposases%2C Mutator family%2C signature.;Dbxref=GeneID:1174460;gbkey=misc_feature;gene=y1062
NC_003143.1	RefSeq	repeat_region	1843712	1843740	.	-	.	ID=id1127;Note=IS285 inverted repeat;gbkey=repeat_region
NC_003143.1	RefSeq	repeat_region	1844023	1845976	.	-	.	ID=id1128;Note=insertion sequence:IS100;gbkey=repeat_region
NC_003143.1	RefSeq	repeat_region	1844023	1844050	.	+	.	ID=id1129;Note=IS100 inverted repeat;gbkey=repeat_region
NC_003143.1	RefSeq	gene	1844089	1844871	.	-	.	ID=gene1572;Name=YPO1622;Note=ypmt1.57c;Dbxref=GeneID:1174461;gbkey=Gene;locus_tag=YPO1622
NC_003143.1	RefSeq	CDS	1844089	1844871	.	-	0	ID=cds1506;Name=YP_002346633.1;Parent=gene1572;Dbxref=InterPro:IPR001270,InterPro:IPR002611,InterPro:IPR003593,UniProtKB%2FTrEMBL:Q7ARK4,Genbank:YP_002346633.1,GeneID:1174461;gbkey=CDS;product=transposase%2FIS protein;protein_id=YP_002346633.1;transl_table=11
NC_003143.1	RefSeq	region	1844521	1844544	.	-	.	ID=id1130;Note=PS00017 ATP%2FGTP-binding site motif A %28P-loop%29.;Dbxref=GeneID:1174461;gbkey=misc_feature
NC_003143.1	RefSeq	gene	1844868	1845890	.	-	.	ID=gene1573;Name=y1093;Dbxref=GeneID:1174462;gbkey=Gene;gene=y1093;gene_synonym=ypmt1;locus_tag=YPO1623
NC_003143.1	RefSeq	CDS	1844868	1845890	.	-	0	ID=cds1507;Name=YP_002346634.1;Parent=gene1573;Dbxref=InterPro:IPR001584,InterPro:IPR006120,InterPro:IPR009057,InterPro:IPR012287,InterPro:IPR012337,UniProtKB%2FTrEMBL:Q7ARN5,Genbank:YP_002346634.1,GeneID:1174462;gbkey=CDS;gene=y1093;product=transposase for insertion sequence IS100;protein_id=YP_002346634.1;transl_table=11
NC_003143.1	RefSeq	region	1845774	1845839	.	-	.	ID=id1131;Note=Predicted helix-turn-helix motif with score 2147 %28%2B6.50 SD%29 at aa 18-39%2C sequence MSSRAIARELGISRNTVKRYLQ;Dbxref=GeneID:1174462;gbkey=misc_feature;gene=y1093
NC_003143.1	RefSeq	repeat_region	1845949	1845976	.	-	.	ID=id1132;Note=IS100 inverted repeat;gbkey=repeat_region
NC_003143.1	RefSeq	gene	1845995	1846534	.	+	.	ID=gene1574;Name=ycfJ;Dbxref=GeneID:1174463;gbkey=Gene;gene=ycfJ;locus_tag=YPO1624
NC_003143.1	RefSeq	CDS	1845995	1846534	.	+	0	ID=cds1508;Name=YP_002346635.1;Parent=gene1574;Dbxref=InterPro:IPR008816,UniProtKB%2FTrEMBL:Q0WGF3,Genbank:YP_002346635.1,GeneID:1174463;gbkey=CDS;gene=ycfJ;product=hypothetical protein;protein_id=YP_002346635.1;transl_table=11
NC_003143.1	RefSeq	gene	1846773	1850219	.	-	.	ID=gene1575;Name=mfd;Dbxref=GeneID:1174464;gbkey=Gene;gene=mfd;locus_tag=YPO1625
NC_003143.1	RefSeq	CDS	1846773	1850219	.	-	0	ID=cds1509;Name=YP_002346636.1;Parent=gene1575;Dbxref=InterPro:IPR001650,InterPro:IPR003711,InterPro:IPR004576,InterPro:IPR005118,InterPro:IPR011545,InterPro:IPR014001,InterPro:IPR014021,UniProtKB%2FTrEMBL:Q7CJ08,Genbank:YP_002346636.1,GeneID:1174464;gbkey=CDS;gene=mfd;product=transcription-repair coupling factor;protein_id=YP_002346636.1;transl_table=11
NC_003143.1	RefSeq	region	1848315	1848338	.	-	.	ID=id1133;Note=PS00017 ATP%2FGTP-binding site motif A %28P-loop%29.;Dbxref=GeneID:1174464;gbkey=misc_feature;gene=mfd
NC_003143.1	RefSeq	gene	1850489	1851691	.	+	.	ID=gene1576;Name=lolC;Dbxref=GeneID:1174465;gbkey=Gene;gene=lolC;locus_tag=YPO1626
NC_003143.1	RefSeq	CDS	1850489	1851691	.	+	0	ID=cds1510;Name=YP_002346637.1;Parent=gene1576;Note=part of the ATP-dependent transport system LolCDE%3B responsible for the localization of lipoproteins to the periplasmic surface of the outer membrane;Dbxref=InterPro:IPR003838,InterPro:IPR011925,UniProtKB%2FTrEMBL:Q7CJ07,Genbank:YP_002346637.1,GeneID:1174465;gbkey=CDS;gene=lolC;product=outer membrane-specific lipoprotein transporter subunit LolC;protein_id=YP_002346637.1;transl_table=11
NC_003143.1	RefSeq	gene	1851684	1852388	.	+	.	ID=gene1577;Name=lolD;Dbxref=GeneID:1174466;gbkey=Gene;gene=lolD;locus_tag=YPO1627
NC_003143.1	RefSeq	CDS	1851684	1852388	.	+	0	ID=cds1511;Name=YP_002346638.1;Parent=gene1577;Note=outer membrane specific%3B part of transporter complex lolCDE involved in the translocation of mature outer membrane-directed lipoproteins%2C from the inner membrane to the periplasmic chaperone;Dbxref=InterPro:IPR003439,InterPro:IPR003593,InterPro:IPR011924,UniProtKB%2FTrEMBL:Q0WGF0,Genbank:YP_002346638.1,GeneID:1174466;gbkey=CDS;gene=lolD;product=lipoprotein transporter ATP-binding protein;protein_id=YP_002346638.1;transl_table=11
NC_003143.1	RefSeq	region	1851810	1851833	.	+	.	ID=id1134;Note=PS00017 ATP%2FGTP-binding site motif A %28P-loop%29.;Dbxref=GeneID:1174466;gbkey=misc_feature;gene=lolD
NC_003143.1	RefSeq	region	1852122	1852166	.	+	.	ID=id1135;Note=PS00211 ABC transporters family signature.;Dbxref=GeneID:1174466;gbkey=misc_feature;gene=lolD
NC_003143.1	RefSeq	gene	1852385	1853635	.	+	.	ID=gene1578;Name=lolE;Dbxref=GeneID:1174467;gbkey=Gene;gene=lolE;locus_tag=YPO1628
NC_003143.1	RefSeq	CDS	1852385	1853635	.	+	0	ID=cds1512;Name=YP_002346639.1;Parent=gene1578;Note=part of the ATP-dependent transport system LolCDE%3B responsible for the localization of lipoproteins to the periplasmic surface of the outer membrane;Dbxref=InterPro:IPR003838,InterPro:IPR011925,InterPro:IPR011926,UniProtKB%2FTrEMBL:Q7CJ05,Genbank:YP_002346639.1,GeneID:1174467;gbkey=CDS;gene=lolE;product=outer membrane-specific lipoprotein transporter subunit LolE;protein_id=YP_002346639.1;transl_table=11
NC_003143.1	RefSeq	gene	1853654	1854424	.	+	.	ID=gene1579;Name=YPO1629;Dbxref=GeneID:1174468;gbkey=Gene;locus_tag=YPO1629
NC_003143.1	RefSeq	CDS	1853654	1854424	.	+	0	ID=cds1513;Name=YP_002346640.1;Parent=gene1579;Note=catalyzes the formation of N-acetyl-D-glucosamine-6-phosphate from N-acetyl-D-glucosamine;Dbxref=InterPro:IPR000600,UniProtKB%2FTrEMBL:Q0WGE8,Genbank:YP_002346640.1,GeneID:1174468;gbkey=CDS;product=N-acetyl-D-glucosamine kinase;protein_id=YP_002346640.1;transl_table=11
NC_003143.1	RefSeq	region	1854041	1854124	.	+	.	ID=id1136;Note=PS01125 ROK family signature.;Dbxref=GeneID:1174468;gbkey=misc_feature
NC_003143.1	RefSeq	gene	1854618	1855454	.	+	.	ID=gene1580;Name=cobB;Dbxref=GeneID:1174469;gbkey=Gene;gene=cobB;locus_tag=YPO1630
NC_003143.1	RefSeq	CDS	1854618	1855454	.	+	0	ID=cds1514;Name=YP_002346641.1;Parent=gene1580;Note=Modulates the activities of several enzymes which are inactive in their acetylated form;Dbxref=InterPro:IPR003000,UniProtKB%2FTrEMBL:Q0WGE7,Genbank:YP_002346641.1,GeneID:1174469;gbkey=CDS;gene=cobB;product=NAD-dependent deacetylase;protein_id=YP_002346641.1;transl_table=11
NC_003143.1	RefSeq	gene	1855784	1857019	.	+	.	ID=gene1581;Name=pepT;Dbxref=GeneID:1174470;gbkey=Gene;gene=pepT;locus_tag=YPO1631
NC_003143.1	RefSeq	CDS	1855784	1857019	.	+	0	ID=cds1515;Name=YP_002346642.1;Parent=gene1581;Note=catalyzes the release of the N-terminal amino acid from a tripeptide;Dbxref=InterPro:IPR001261,InterPro:IPR002933,InterPro:IPR010161,InterPro:IPR011650,UniProtKB%2FTrEMBL:Q0WGE6,Genbank:YP_002346642.1,GeneID:1174470;gbkey=CDS;gene=pepT;product=peptidase T;protein_id=YP_002346642.1;transl_table=11
NC_003143.1	RefSeq	region	1856000	1856029	.	+	.	ID=id1137;Note=PS00758 ArgE %2F dapE %2F ACY1 %2F CPG2 %2F yscS family signature 1.;Dbxref=GeneID:1174470;gbkey=misc_feature;gene=pepT
NC_003143.1	RefSeq	region	1856195	1856311	.	+	.	ID=id1138;Note=PS00759 ArgE %2F dapE %2F ACY1 %2F CPG2 %2F yscS family signature 2.;Dbxref=GeneID:1174470;gbkey=misc_feature;gene=pepT
NC_003143.1	RefSeq	gene	1857252	1858373	.	-	.	ID=gene1582;Name=YPO1632;Dbxref=GeneID:1174471;gbkey=Gene;locus_tag=YPO1632
NC_003143.1	RefSeq	CDS	1857252	1858373	.	-	0	ID=cds1516;Name=YP_002346643.1;Parent=gene1582;Dbxref=InterPro:IPR003347,InterPro:IPR013109,UniProtKB%2FTrEMBL:Q0WGE5,Genbank:YP_002346643.1,GeneID:1174471;gbkey=CDS;product=hypothetical protein;protein_id=YP_002346643.1;transl_table=11
NC_003143.1	RefSeq	gene	1858457	1859911	.	-	.	ID=gene1583;Name=phoQ;Dbxref=GeneID:1174472;gbkey=Gene;gene=phoQ;locus_tag=YPO1633
NC_003143.1	RefSeq	CDS	1858457	1859911	.	-	0	ID=cds1517;Name=YP_002346644.1;Parent=gene1583;Dbxref=InterPro:IPR003594,InterPro:IPR003660,InterPro:IPR003661,InterPro:IPR004358,InterPro:IPR005467,InterPro:IPR009082,UniProtKB%2FTrEMBL:Q7CJ04,Genbank:YP_002346644.1,GeneID:1174472;gbkey=CDS;gene=phoQ;product=sensor protein PhoQ;protein_id=YP_002346644.1;transl_table=11
NC_003143.1	RefSeq	gene	1859917	1860588	.	-	.	ID=gene1584;Name=phoP;Dbxref=GeneID:1174473;gbkey=Gene;gene=phoP;locus_tag=YPO1634
NC_003143.1	RefSeq	CDS	1859917	1860588	.	-	0	ID=cds1518;Name=YP_002346645.1;Parent=gene1584;Note=response regulator in two-component regulatory system with PhoQ%3B involved in magnesium starvation and stress;Dbxref=InterPro:IPR001789,InterPro:IPR001867,InterPro:IPR011006,UniProtKB%2FTrEMBL:P74992,Genbank:YP_002346645.1,GeneID:1174473;gbkey=CDS;gene=phoP;product=DNA-binding transcriptional regulator PhoP;protein_id=YP_002346645.1;transl_table=11
NC_003143.1	RefSeq	gene	1860799	1861422	.	-	.	ID=gene1585;Name=YPO1635;Dbxref=GeneID:1174474;gbkey=Gene;locus_tag=YPO1635
NC_003143.1	RefSeq	CDS	1860799	1861422	.	-	0	ID=cds1519;Name=YP_002346646.1;Parent=gene1585;Dbxref=InterPro:IPR003394,UniProtKB%2FTrEMBL:Q7CJ02,Genbank:YP_002346646.1,GeneID:1174474;gbkey=CDS;product=lipoprotein;protein_id=YP_002346646.1;transl_table=11
NC_003143.1	RefSeq	region	1861378	1861410	.	-	.	ID=id1139;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site.;Dbxref=GeneID:1174474;gbkey=misc_feature
NC_003143.1	RefSeq	gene	1861610	1862980	.	-	.	ID=gene1586;Name=purB;Dbxref=GeneID:1174475;gbkey=Gene;gene=purB;locus_tag=YPO1636
NC_003143.1	RefSeq	CDS	1861610	1862980	.	-	0	ID=cds1520;Name=YP_002346647.1;Parent=gene1586;Note=Catalyzes two discrete reactions in the de novo synthesis of purines: the cleavage of adenylosuccinate and succinylaminoimidazole carboxamide ribotide;Dbxref=InterPro:IPR000362,InterPro:IPR004769,InterPro:IPR008948,InterPro:IPR013539,UniProtKB%2FTrEMBL:Q0WGE1,Genbank:YP_002346647.1,GeneID:1174475;gbkey=CDS;gene=purB;product=adenylosuccinate lyase;protein_id=YP_002346647.1;transl_table=11
NC_003143.1	RefSeq	region	1862072	1862101	.	-	.	ID=id1140;Note=PS00163 Fumarate lyases signature.;Dbxref=GeneID:1174475;gbkey=misc_feature;gene=purB
NC_003143.1	RefSeq	gene	1863041	1863667	.	-	.	ID=gene1587;Name=YPO1637;Dbxref=GeneID:1174476;gbkey=Gene;locus_tag=YPO1637
NC_003143.1	RefSeq	CDS	1863041	1863667	.	-	0	ID=cds1521;Name=YP_002346648.1;Parent=gene1587;Note=HflD%3B UPF0274%3B in Escherichia coli this protein is peripherally associated with the membrane and appears to act with lambda CII protein%3B in Haemophilus influenzae a knockout of the HI0638 gene affected paracytosis;Dbxref=InterPro:IPR007451,UniProtKB%2FTrEMBL:Q0WGE0,Genbank:YP_002346648.1,GeneID:1174476;gbkey=CDS;product=hypothetical protein;protein_id=YP_002346648.1;transl_table=11
NC_003143.1	RefSeq	gene	1863725	1864840	.	-	.	ID=gene1588;Name=mnmA;Dbxref=GeneID:1174477;gbkey=Gene;gene=mnmA;locus_tag=YPO1638
NC_003143.1	RefSeq	CDS	1863725	1864840	.	-	0	ID=cds1522;Name=YP_002346649.1;Parent=gene1588;Note=catalyzes a sulfuration reaction to synthesize 2-thiouridine at the U34 position of tRNAs;Dbxref=InterPro:IPR002086,InterPro:IPR004506,UniProtKB%2FTrEMBL:Q0WGD9,Genbank:YP_002346649.1,GeneID:1174477;gbkey=CDS;gene=mnmA;product=tRNA-specific 2-thiouridylase MnmA;protein_id=YP_002346649.1;transl_table=11
NC_003143.1	RefSeq	region	1863764	1863799	.	-	.	ID=id1141;Note=PS00070 Aldehyde dehydrogenases cysteine active site.;Dbxref=GeneID:1174477;gbkey=misc_feature;gene=mnmA
NC_003143.1	RefSeq	gene	1865027	1865473	.	-	.	ID=gene1589;Name=YPO1639;Dbxref=GeneID:1174478;gbkey=Gene;locus_tag=YPO1639
NC_003143.1	RefSeq	CDS	1865027	1865473	.	-	0	ID=cds1523;Name=YP_002346650.1;Parent=gene1589;Dbxref=InterPro:IPR000086,UniProtKB%2FTrEMBL:Q7CJ01,Genbank:YP_002346650.1,GeneID:1174478;gbkey=CDS;product=hypothetical protein;protein_id=YP_002346650.1;transl_table=11
NC_003143.1	RefSeq	region	1865309	1865368	.	-	.	ID=id1142;Note=PS00893 mutT domain signature.;Dbxref=GeneID:1174478;gbkey=misc_feature
NC_003143.1	RefSeq	gene	1865466	1866092	.	-	.	ID=gene1590;Name=ymfC;Dbxref=GeneID:1174479;gbkey=Gene;gene=ymfC;locus_tag=YPO1640
NC_003143.1	RefSeq	CDS	1865466	1866092	.	-	0	ID=cds1524;Name=YP_002346651.1;Parent=gene1590;Dbxref=InterPro:IPR000748,InterPro:IPR006145,UniProtKB%2FTrEMBL:Q0WGD7,Genbank:YP_002346651.1,GeneID:1174479;gbkey=CDS;gene=ymfC;product=pseudouridine synthase;protein_id=YP_002346651.1;transl_table=11
NC_003143.1	RefSeq	region	1865853	1865897	.	-	.	ID=id1143;Note=PS01149 Rsu family of pseudouridine synthase signature.;Dbxref=GeneID:1174479;gbkey=misc_feature;gene=ymfC
NC_003143.1	RefSeq	gene	1866223	1867476	.	+	.	ID=gene1591;Name=icdA;Dbxref=GeneID:1174480;gbkey=Gene;gene=icdA;gene_synonym=icdE;locus_tag=YPO1641
NC_003143.1	RefSeq	CDS	1866223	1867476	.	+	0	ID=cds1525;Name=YP_002346652.1;Parent=gene1591;Note=Converts isocitrate to alpha ketoglutarate;Dbxref=InterPro:IPR001804,InterPro:IPR004439,InterPro:IPR013814,UniProtKB%2FTrEMBL:Q0WGD6,Genbank:YP_002346652.1,GeneID:1174480;gbkey=CDS;gene=icdA;product=isocitrate dehydrogenase;protein_id=YP_002346652.1;transl_table=11
NC_003143.1	RefSeq	region	1867132	1867191	.	+	.	ID=id1144;Note=PS00470 Isocitrate and isopropylmalate dehydrogenases signature.;Dbxref=GeneID:1174480;gbkey=misc_feature;gene=icdA
NC_003143.1	RefSeq	gene	1867622	1868665	.	-	.	ID=gene1592;Name=cscR;Dbxref=GeneID:1174481;gbkey=Gene;gene=cscR;locus_tag=YPO1642
NC_003143.1	RefSeq	CDS	1867622	1868665	.	-	0	ID=cds1526;Name=YP_002346653.1;Parent=gene1592;Dbxref=InterPro:IPR000843,InterPro:IPR001761,InterPro:IPR010982,UniProtKB%2FTrEMBL:Q7CJ00,Genbank:YP_002346653.1,GeneID:1174481;gbkey=CDS;gene=cscR;product=sucrose operon repressor LacI family;protein_id=YP_002346653.1;transl_table=11
NC_003143.1	RefSeq	region	1868597	1868662	.	-	.	ID=id1145;Note=Predicted helix-turn-helix motif with score 1538 %28%2B4.43 SD%29 at aa 2-23%2C sequence VSLKEVANLASVSLMTASRAIN;Dbxref=GeneID:1174481;gbkey=misc_feature;gene=cscR
NC_003143.1	RefSeq	region	1868600	1868656	.	-	.	ID=id1146;Note=PS00356 Bacterial regulatory proteins%2C lacI family signature.;Dbxref=GeneID:1174481;gbkey=misc_feature;gene=cscR
NC_003143.1	RefSeq	gene	1868941	1869201	.	-	.	ID=gene1593;Name=YPO1643;Dbxref=GeneID:1174482;gbkey=Gene;locus_tag=YPO1643
NC_003143.1	RefSeq	CDS	1868941	1869201	.	-	0	ID=cds1527;Name=YP_002346654.1;Parent=gene1593;Note=No significant database hits;Dbxref=UniProtKB%2FTrEMBL:Q7CIZ9,Genbank:YP_002346654.1,GeneID:1174482;gbkey=CDS;product=hypothetical protein;protein_id=YP_002346654.1;transl_table=11
NC_003143.1	RefSeq	gene	1869321	1870901	.	-	.	ID=gene1594;Name=aer;Dbxref=GeneID:1174483;gbkey=Gene;gene=aer;gene_synonym=air;locus_tag=YPO1644
NC_003143.1	RefSeq	CDS	1869321	1870901	.	-	0	ID=cds1528;Name=YP_002346655.1;Parent=gene1594;Dbxref=InterPro:IPR000014,InterPro:IPR001610,InterPro:IPR003660,InterPro:IPR004089,InterPro:IPR004090,InterPro:IPR013655,UniProtKB%2FTrEMBL:Q0WGD3,Genbank:YP_002346655.1,GeneID:1174483;gbkey=CDS;gene=aer;product=methyl-accepting chemotaxis protein;protein_id=YP_002346655.1;transl_table=11
NC_003143.1	RefSeq	gene	1871821	1872678	.	-	.	ID=gene1595;Name=YPO1645;Dbxref=GeneID:1174484;gbkey=Gene;locus_tag=YPO1645
NC_003143.1	RefSeq	CDS	1871821	1872678	.	-	0	ID=cds1529;Name=YP_002346656.1;Parent=gene1595;Dbxref=InterPro:IPR008030,UniProtKB%2FTrEMBL:Q7CIZ8,Genbank:YP_002346656.1,GeneID:1174484;gbkey=CDS;product=hypothetical protein;protein_id=YP_002346656.1;transl_table=11
NC_003143.1	RefSeq	gene	1872838	1873221	.	+	.	ID=gene1596;Name=YPO1646;Dbxref=GeneID:1174485;gbkey=Gene;locus_tag=YPO1646
NC_003143.1	RefSeq	CDS	1872838	1873221	.	+	0	ID=cds1530;Name=YP_002346657.1;Parent=gene1596;Dbxref=InterPro:IPR002577,InterPro:IPR011991,UniProtKB%2FTrEMBL:Q0WGD1,Genbank:YP_002346657.1,GeneID:1174485;gbkey=CDS;product=hypothetical protein;protein_id=YP_002346657.1;transl_table=11
NC_003143.1	RefSeq	gene	1873255	1873452	.	+	.	ID=gene1597;Name=YPO1647;Dbxref=GeneID:1174486;gbkey=Gene;locus_tag=YPO1647;pseudo=true
NC_003143.1	RefSeq	region	1873255	1873452	.	+	.	ID=id1147;Note=Similar to many cytochrome B fragments found in various genetic backgrounds: Urocampus carinirostris cytochrome B %28fragment%29 CytB TR:Q9MI83 %28EMBL:AF155468%29 %28100 aa%29 fasta scores: E%28%29: 1.5%2C 32.3%25 id in 65 aa%2C and to Apistogramma caetei cytochrome B %28fragment%29 CytB TR:CAC16341 %28EMBL:AJ297670%29 %28115 aa%29 fasta scores: E%28%29: 2%2C34.3%25 id in 67 aa;Dbxref=GeneID:1174486;gbkey=misc_feature;pseudo=true
NC_003143.1	RefSeq	gene	1873753	1875078	.	+	.	ID=gene1598;Name=YPO1648;Dbxref=GeneID:1174487;gbkey=Gene;locus_tag=YPO1648
NC_003143.1	RefSeq	CDS	1873753	1875078	.	+	0	ID=cds1531;Name=YP_002346658.1;Parent=gene1598;Dbxref=InterPro:IPR000560,UniProtKB%2FTrEMBL:Q7CIZ7,Genbank:YP_002346658.1,GeneID:1174487;gbkey=CDS;product=phosphoanhydride phosphorylase;protein_id=YP_002346658.1;transl_table=11
NC_003143.1	RefSeq	region	1873858	1873902	.	+	.	ID=id1148;Note=PS00616 Histidine acid phosphatases phosphohistidine signature.;Dbxref=GeneID:1174487;gbkey=misc_feature
NC_003143.1	RefSeq	gene	1875380	1875595	.	-	.	ID=gene1599;Name=YPO1649;Dbxref=GeneID:1174488;gbkey=Gene;locus_tag=YPO1649
NC_003143.1	RefSeq	CDS	1875380	1875595	.	-	0	ID=cds1532;Name=YP_002346659.1;Parent=gene1599;Dbxref=UniProtKB%2FTrEMBL:Q7CIZ6,Genbank:YP_002346659.1,GeneID:1174488;gbkey=CDS;product=hypothetical protein;protein_id=YP_002346659.1;transl_table=11
NC_003143.1	RefSeq	gene	1875886	1876788	.	-	.	ID=gene1600;Name=YPO1650;Dbxref=GeneID:1174489;gbkey=Gene;locus_tag=YPO1650
NC_003143.1	RefSeq	CDS	1875886	1876788	.	-	0	ID=cds1533;Name=YP_002346660.1;Parent=gene1600;Dbxref=UniProtKB%2FTrEMBL:Q0WGC8,Genbank:YP_002346660.1,GeneID:1174489;gbkey=CDS;product=hypothetical protein;protein_id=YP_002346660.1;transl_table=11
NC_003143.1	RefSeq	gene	1876877	1877326	.	-	.	ID=gene1601;Name=YPO1651;Dbxref=GeneID:1174490;gbkey=Gene;locus_tag=YPO1651
NC_003143.1	RefSeq	CDS	1876877	1877326	.	-	0	ID=cds1534;Name=YP_002346661.1;Parent=gene1601;Dbxref=InterPro:IPR000485,InterPro:IPR011008,InterPro:IPR011991,UniProtKB%2FTrEMBL:Q7CIZ5,Genbank:YP_002346661.1,GeneID:1174490;gbkey=CDS;product=AsnC family transcriptional regulator;protein_id=YP_002346661.1;transl_table=11
NC_003143.1	RefSeq	region	1877210	1877275	.	-	.	ID=id1149;Note=Predicted helix-turn-helix motif with score 1081 %28%2B2.87 SD%29 at aa 18-39%2C sequence TSLKDLSQKVNLSSPSTSERLR;Dbxref=GeneID:1174490;gbkey=misc_feature
NC_003143.1	RefSeq	gene	1877817	1878350	.	-	.	ID=gene1602;Name=ylaC;Dbxref=GeneID:1174491;gbkey=Gene;gene=ylaC;locus_tag=YPO1652
NC_003143.1	RefSeq	CDS	1877817	1878350	.	-	0	ID=cds1535;Name=YP_002346662.1;Parent=gene1602;Dbxref=UniProtKB%2FTrEMBL:Q7CIZ4,Genbank:YP_002346662.1,GeneID:1174491;gbkey=CDS;gene=ylaC;product=hypothetical protein;protein_id=YP_002346662.1;transl_table=11
NC_003143.1	RefSeq	gene	1878633	1879643	.	-	.	ID=gene1603;Name=YPO1653;Dbxref=GeneID:1174492;gbkey=Gene;locus_tag=YPO1653
NC_003143.1	RefSeq	CDS	1878633	1879643	.	-	0	ID=cds1536;Name=YP_002346663.1;Parent=gene1603;Dbxref=InterPro:IPR001865,InterPro:IPR002085,InterPro:IPR011032,InterPro:IPR013149,InterPro:IPR013154,UniProtKB%2FTrEMBL:Q0WGC5,Genbank:YP_002346663.1,GeneID:1174492;gbkey=CDS;product=zinc-binding dehydrogenase;protein_id=YP_002346663.1;transl_table=11
NC_003143.1	RefSeq	gene	1880050	1883232	.	-	.	ID=gene1604;Name=lacZ;Dbxref=GeneID:1174493;gbkey=Gene;gene=lacZ;locus_tag=YPO1654
NC_003143.1	RefSeq	CDS	1880050	1883232	.	-	0	ID=cds1537;Name=YP_002346664.1;Parent=gene1604;Note=forms a homotetramer%3B hydrolyzes lactose disaccharide to galactose and glucose%3B converts lactose to allolactose which is the natural inducer of the lac operon;Dbxref=InterPro:IPR004199,InterPro:IPR006101,InterPro:IPR006102,InterPro:IPR006103,InterPro:IPR006104,InterPro:IPR008979,InterPro:IPR011013,InterPro:IPR013781,InterPro:IPR013812,UniProtKB%2FTrEMBL:Q7CIZ3,Genbank:YP_002346664.1,GeneID:1174493;gbkey=CDS;gene=lacZ;product=beta-D-galactosidase;protein_id=YP_002346664.1;transl_table=11
NC_003143.1	RefSeq	region	1881802	1881846	.	-	.	ID=id1150;Note=PS00608 Glycosyl hydrolases family 2 acid%2Fbase catalyst.;Dbxref=GeneID:1174493;gbkey=misc_feature;gene=lacZ
NC_003143.1	RefSeq	region	1881955	1882032	.	-	.	ID=id1151;Note=PS00719 Glycosyl hydrolases family 2 signature 1.;Dbxref=GeneID:1174493;gbkey=misc_feature;gene=lacZ
NC_003143.1	RefSeq	gene	1883592	1884034	.	+	.	ID=gene1605;Name=YPO1655a;Dbxref=GeneID:16744756;gbkey=Gene;locus_tag=YPO1655a
NC_003143.1	RefSeq	ncRNA	1883592	1884034	.	+	.	ID=rna32;Parent=gene1605;Dbxref=GeneID:16744756;gbkey=ncRNA;ncrna_class=other;product=ncRNA-cspA thermoregulator
NC_003143.1	RefSeq	exon	1883592	1884034	.	+	.	ID=id1152;Parent=rna32;Dbxref=GeneID:16744756;gbkey=ncRNA;ncrna_class=other;product=ncRNA-cspA thermoregulator
NC_003143.1	RefSeq	gene	1883773	1883985	.	+	.	ID=gene1606;Name=cspC;Dbxref=GeneID:1174494;gbkey=Gene;gene=cspC;gene_synonym=msmB;locus_tag=YPO1655
NC_003143.1	RefSeq	CDS	1883773	1883985	.	+	0	ID=cds1538;Name=YP_002346665.1;Parent=gene1606;Dbxref=InterPro:IPR002059,InterPro:IPR008994,InterPro:IPR011129,InterPro:IPR012156,InterPro:IPR012340,UniProtKB%2FTrEMBL:Q74UE0,Genbank:YP_002346665.1,GeneID:1174494;gbkey=CDS;gene=cspC;product=cold shock protein;protein_id=YP_002346665.1;transl_table=11
NC_003143.1	RefSeq	region	1883824	1883883	.	+	.	ID=id1153;Note=PS00352 %27Cold-shock%27 DNA-binding domain signature.;Dbxref=GeneID:1174494;gbkey=misc_feature;gene=cspC
NC_003143.1	RefSeq	gene	1884200	1884391	.	+	.	ID=gene1607;Name=YPO1656;Dbxref=GeneID:1174495;gbkey=Gene;locus_tag=YPO1656
NC_003143.1	RefSeq	CDS	1884200	1884391	.	+	0	ID=cds1539;Name=YP_002346666.1;Parent=gene1607;Dbxref=UniProtKB%2FTrEMBL:Q0WGC2,Genbank:YP_002346666.1,GeneID:1174495;gbkey=CDS;product=hypothetical protein;protein_id=YP_002346666.1;transl_table=11
NC_003143.1	RefSeq	gene	1884574	1886275	.	-	.	ID=gene1608;Name=cheM;Dbxref=GeneID:1174496;gbkey=Gene;gene=cheM;gene_synonym=tar;locus_tag=YPO1657;pseudo=true
NC_003143.1	RefSeq	region	1885289	1885357	.	-	.	ID=id1154;Note=PS00538 Bacterial chemotaxis sensory transducers signature.;Dbxref=GeneID:1174496;gbkey=misc_feature;gene=cheM
NC_003143.1	RefSeq	gene	1887422	1888132	.	+	.	ID=gene1609;Name=mgtC;Dbxref=GeneID:1174499;gbkey=Gene;gene=mgtC;locus_tag=YPO1660
NC_003143.1	RefSeq	CDS	1887422	1888132	.	+	0	ID=cds1540;Name=YP_002346668.1;Parent=gene1609;Dbxref=InterPro:IPR003416,UniProtKB%2FTrEMBL:Q7CIZ2,Genbank:YP_002346668.1,GeneID:1174499;gbkey=CDS;gene=mgtC;product=Mg%282%2B%29 transport ATPase protein C;protein_id=YP_002346668.1;transl_table=11
NC_003143.1	RefSeq	gene	1888533	1891232	.	+	.	ID=gene1610;Name=mgtB;Dbxref=GeneID:1174500;gbkey=Gene;gene=mgtB;locus_tag=YPO1661
NC_003143.1	RefSeq	CDS	1888533	1891232	.	+	0	ID=cds1541;Name=YP_002346669.1;Parent=gene1610;Dbxref=InterPro:IPR000695,InterPro:IPR001757,InterPro:IPR004014,InterPro:IPR005834,InterPro:IPR006415,InterPro:IPR008250,UniProtKB%2FTrEMBL:Q7CIZ1,Genbank:YP_002346669.1,GeneID:1174500;gbkey=CDS;gene=mgtB;product=Mg%282%2B%29 transport ATPase protein B;protein_id=YP_002346669.1;transl_table=11
NC_003143.1	RefSeq	region	1889643	1889663	.	+	.	ID=id1155;Note=PS00154 E1-E2 ATPases phosphorylation site.;Dbxref=GeneID:1174500;gbkey=misc_feature;gene=mgtB
NC_003143.1	RefSeq	gene	1892411	1892771	.	+	.	ID=gene1611;Name=flhD;Dbxref=GeneID:1174501;gbkey=Gene;gene=flhD;locus_tag=YPO1662;pseudo=true
NC_003143.1	RefSeq	gene	1892772	1893356	.	+	.	ID=gene1612;Name=flhC;Dbxref=GeneID:1174502;gbkey=Gene;gene=flhC;locus_tag=YPO1663
NC_003143.1	RefSeq	CDS	1892772	1893356	.	+	0	ID=cds1542;Name=YP_002346670.1;Parent=gene1612;Note=With FlhD is involved in the activation of class 2 flagellar genes and as well as a number of other genetic systems;Dbxref=InterPro:IPR007944,UniProtKB%2FTrEMBL:Q7CIZ0,Genbank:YP_002346670.1,GeneID:1174502;gbkey=CDS;gene=flhC;product=transcriptional activator FlhC;protein_id=YP_002346670.1;transl_table=11
NC_003143.1	RefSeq	gene	1893561	1894448	.	+	.	ID=gene1613;Name=motA;Dbxref=GeneID:1174503;gbkey=Gene;gene=motA;locus_tag=YPO1664
NC_003143.1	RefSeq	CDS	1893561	1894448	.	+	0	ID=cds1543;Name=YP_002346671.1;Parent=gene1613;Note=With MotB forms the ion channels that couple flagellar rotation to proton%2Fsodium motive force across the membrane and forms the stator elements of the rotary flagellar machine;Dbxref=InterPro:IPR000540,UniProtKB%2FTrEMBL:Q7CIY9,Genbank:YP_002346671.1,GeneID:1174503;gbkey=CDS;gene=motA;product=flagellar motor protein MotA;protein_id=YP_002346671.1;transl_table=11
NC_003143.1	RefSeq	region	1894173	1894226	.	+	.	ID=id1156;Note=PS01307 Flagellar motor protein motA family signature.;Dbxref=GeneID:1174503;gbkey=misc_feature;gene=motA
NC_003143.1	RefSeq	gene	1894445	1895728	.	+	.	ID=gene1614;Name=motB;Dbxref=GeneID:1174504;gbkey=Gene;gene=motB;locus_tag=YPO1665
NC_003143.1	RefSeq	CDS	1894445	1895728	.	+	0	ID=cds1544;Name=YP_002346672.1;Parent=gene1614;Note=with MotA forms the ion channels that couple flagellar rotation to proton%2Fsodium motive force across the membrane and forms the stator elements of the rotary flagellar machine;Dbxref=InterPro:IPR006665,UniProtKB%2FTrEMBL:Q7CIY8,Genbank:YP_002346672.1,GeneID:1174504;gbkey=CDS;gene=motB;product=flagellar motor protein MotB;protein_id=YP_002346672.1;transl_table=11
NC_003143.1	RefSeq	region	1894505	1894573	.	+	.	ID=id1157;Note=1 probable transmembrane helix predicted;Dbxref=GeneID:1174504;gbkey=misc_feature;gene=motB
NC_003143.1	RefSeq	gene	1895739	1897910	.	+	.	ID=gene1615;Name=cheA;Dbxref=GeneID:1174505;gbkey=Gene;gene=cheA;locus_tag=YPO1666
NC_003143.1	RefSeq	CDS	1895739	1897910	.	+	0	ID=cds1545;Name=YP_002346673.1;Parent=gene1615;Note=chemotactic sensory histidine kinase in two-component regulatory system with CheB and CheY%3B sensory histidine kinase%2Fsignal sensing protein%3B CheA is the histidine kinase component;Dbxref=InterPro:IPR000629,InterPro:IPR002545,InterPro:IPR003594,InterPro:IPR004105,InterPro:IPR004358,InterPro:IPR005467,InterPro:IPR008207,InterPro:IPR008208,InterPro:IPR009082,UniProtKB%2FTrEMBL:Q7CIY7,Genbank:YP_002346673.1,GeneID:1174505;gbkey=CDS;gene=cheA;product=chemotaxis protein CheA;protein_id=YP_002346673.1;transl_table=11
NC_003143.1	RefSeq	region	1895772	1895798	.	+	.	ID=id1158;Note=PS00039 DEAD-box subfamily ATP-dependent helicases signature.;Dbxref=GeneID:1174505;gbkey=misc_feature;gene=cheA
NC_003143.1	RefSeq	gene	1898073	1898570	.	+	.	ID=gene1616;Name=cheW;Dbxref=GeneID:1174506;gbkey=Gene;gene=cheW;locus_tag=YPO1667
NC_003143.1	RefSeq	CDS	1898073	1898570	.	+	0	ID=cds1546;Name=YP_002346674.1;Parent=gene1616;Dbxref=InterPro:IPR002545,UniProtKB%2FTrEMBL:Q7CIY6,Genbank:YP_002346674.1,GeneID:1174506;gbkey=CDS;gene=cheW;product=purine-binding chemotaxis protein;protein_id=YP_002346674.1;transl_table=11
NC_003143.1	RefSeq	gene	1898862	1900097	.	-	.	ID=gene1617;Name=yihN;Dbxref=GeneID:1174507;gbkey=Gene;gene=yihN;locus_tag=YPO1668
NC_003143.1	RefSeq	CDS	1898862	1900097	.	-	0	ID=cds1547;Name=YP_002346675.1;Parent=gene1617;Dbxref=InterPro:IPR007114,InterPro:IPR011701,UniProtKB%2FTrEMBL:Q7CIY5,Genbank:YP_002346675.1,GeneID:1174507;gbkey=CDS;gene=yihN;product=hypothetical protein;protein_id=YP_002346675.1;transl_table=11
NC_003143.1	RefSeq	gene	1900110	1900487	.	-	.	ID=gene1618;Name=YPO1669;Dbxref=GeneID:1174508;gbkey=Gene;locus_tag=YPO1669
NC_003143.1	RefSeq	CDS	1900110	1900487	.	-	0	ID=cds1548;Name=YP_002346676.1;Parent=gene1618;Dbxref=InterPro:IPR006056,InterPro:IPR006175,InterPro:IPR013813,UniProtKB%2FTrEMBL:Q0WGB2,Genbank:YP_002346676.1,GeneID:1174508;gbkey=CDS;product=hypothetical protein;protein_id=YP_002346676.1;transl_table=11
NC_003143.1	RefSeq	region	1900398	1900430	.	-	.	ID=id1159;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site.;Dbxref=GeneID:1174508;gbkey=misc_feature
NC_003143.1	RefSeq	gene	1900484	1901470	.	-	.	ID=gene1619;Name=YPO1670;Dbxref=GeneID:1174509;gbkey=Gene;locus_tag=YPO1670
NC_003143.1	RefSeq	CDS	1900484	1901470	.	-	0	ID=cds1549;Name=YP_002346677.1;Parent=gene1619;Dbxref=InterPro:IPR012307,UniProtKB%2FTrEMBL:Q7CIY4,Genbank:YP_002346677.1,GeneID:1174509;gbkey=CDS;product=hypothetical protein;protein_id=YP_002346677.1;transl_table=11
NC_003143.1	RefSeq	gene	1901648	1902325	.	+	.	ID=gene1620;Name=YPO1671;Dbxref=GeneID:1174510;gbkey=Gene;locus_tag=YPO1671
NC_003143.1	RefSeq	CDS	1901648	1902325	.	+	0	ID=cds1550;Name=YP_002346678.1;Parent=gene1620;Dbxref=InterPro:IPR013559,UniProtKB%2FTrEMBL:Q7CIY3,Genbank:YP_002346678.1,GeneID:1174510;gbkey=CDS;product=DNA-binding protein;protein_id=YP_002346678.1;transl_table=11
NC_003143.1	RefSeq	region	1902230	1902295	.	+	.	ID=id1160;Note=Predicted helix-turn-helix motif with score 1592 %28%2B4.61 SD%29 at aa 195-216%2C sequence VTNKIVSASLGISPVTIYKHLR;Dbxref=GeneID:1174510;gbkey=misc_feature
NC_003143.1	RefSeq	gene	1902800	1906606	.	+	.	ID=gene1621;Name=YPO1672;Dbxref=GeneID:1174511;gbkey=Gene;locus_tag=YPO1672
NC_003143.1	RefSeq	CDS	1902800	1906606	.	+	0	ID=cds1551;Name=YP_002346679.1;Parent=gene1621;Dbxref=InterPro:IPR005546,InterPro:IPR006162,InterPro:IPR006315,InterPro:IPR006626,InterPro:IPR011050,InterPro:IPR013783,UniProtKB%2FTrEMBL:Q0WGA9,Genbank:YP_002346679.1,GeneID:1174511;gbkey=CDS;product=hypothetical protein;protein_id=YP_002346679.1;transl_table=11
NC_003143.1	RefSeq	gene	1907134	1910010	.	+	.	ID=gene1622;Name=YPO1673;Dbxref=GeneID:1174512;gbkey=Gene;locus_tag=YPO1673
NC_003143.1	RefSeq	CDS	1907134	1910010	.	+	0	ID=cds1552;Name=YP_002346680.1;Parent=gene1622;Dbxref=UniProtKB%2FTrEMBL:Q7CIY2,Genbank:YP_002346680.1,GeneID:1174512;gbkey=CDS;product=hypothetical protein;protein_id=YP_002346680.1;transl_table=11
NC_003143.1	RefSeq	gene	1910079	1910780	.	+	.	ID=gene1623;Name=YPO1674;Dbxref=GeneID:1174513;gbkey=Gene;locus_tag=YPO1674
NC_003143.1	RefSeq	CDS	1910079	1910780	.	+	0	ID=cds1553;Name=YP_002346681.1;Parent=gene1623;Dbxref=UniProtKB%2FTrEMBL:Q7CIY1,Genbank:YP_002346681.1,GeneID:1174513;gbkey=CDS;product=hypothetical protein;protein_id=YP_002346681.1;transl_table=11
NC_003143.1	RefSeq	region	1910136	1910168	.	+	.	ID=id1161;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site.;Dbxref=GeneID:1174513;gbkey=misc_feature
NC_003143.1	RefSeq	region	1910706	1910774	.	+	.	ID=id1162;Note=1 probable transmembrane helix predicted;Dbxref=GeneID:1174513;gbkey=misc_feature
NC_003143.1	RefSeq	gene	1911021	1912694	.	+	.	ID=gene1624;Name=cheD;Dbxref=GeneID:1174514;gbkey=Gene;gene=cheD;locus_tag=YPO1675
NC_003143.1	RefSeq	CDS	1911021	1912694	.	+	0	ID=cds1554;Name=YP_002346682.1;Parent=gene1624;Dbxref=InterPro:IPR003122,InterPro:IPR003660,InterPro:IPR004089,InterPro:IPR004090,InterPro:IPR004091,UniProtKB%2FTrEMBL:Q7CIY0,Genbank:YP_002346682.1,GeneID:1174514;gbkey=CDS;gene=cheD;product=methyl-accepting chemotaxis protein;protein_id=YP_002346682.1;transl_table=11
NC_003143.1	RefSeq	region	1911900	1911968	.	+	.	ID=id1163;Note=PS00538 Bacterial chemotaxis sensory transducers signature.;Dbxref=GeneID:1174514;gbkey=misc_feature;gene=cheD
NC_003143.1	RefSeq	gene	1912878	1914488	.	+	.	ID=gene1625;Name=YPO1676;Dbxref=GeneID:1174515;gbkey=Gene;locus_tag=YPO1676;pseudo=true
NC_003143.1	RefSeq	region	1912878	1914488	.	+	.	ID=id1164;Note=Similar to Enterobacter aerogenes methyl-accepting chemotaxis aspartate transducer Tas SW:MCPD_ENTAE %28P21823%29 %28512 aa%29 fasta scores: E%28%29: 0%2C 63.9%25 id in 523 aa%2C and to Escherichia coli methyl-accepting chemotaxis protein IV Tap SW:MCP4_ECOLI %28P07018%29 %28533 aa%29 fasta scores: E%28%29: 0%2C 56.6%25 id in 516 aa%2C and to E. coli methyl-accepting chemotaxis protein I SW:MCP1_ECOLI %28P02942%29 %28551 aa%29 fasta scores: E%28%29: 0%2C 54.1%25 id in 529 aa%2C and to Escherichia coli methyl-accepting chemotaxis protein II Tar or CheM SW:MCP2_ECOLI %28P07017%29 %28553 aa%29 fasta scores: E%28%29: 0%2C 51.5%25 id in 518 aa%2C and to Escherichia coli methyl-accepting chemotaxis protein III Trg SW:MCP3_ECOLI %28P05704%29 %28546 aa%29 fasta scores: E%28%29: 0%2C 45.8%25 id in 518 aa. This CDS contains a stop codon at position 406. The sequence has been checked and is believed to be correct;Dbxref=GeneID:1174515;gbkey=misc_feature;pseudo=true
NC_003143.1	RefSeq	region	1913751	1913819	.	+	.	ID=id1165;Note=PS00538 Bacterial chemotaxis sensory transducers signature.;Dbxref=GeneID:1174515;gbkey=misc_feature
NC_003143.1	RefSeq	gene	1914661	1915533	.	+	.	ID=gene1626;Name=cheR;Dbxref=GeneID:1174516;gbkey=Gene;gene=cheR;gene_synonym=cheX;locus_tag=YPO1678
NC_003143.1	RefSeq	CDS	1914661	1915533	.	+	0	ID=cds1555;Name=YP_002346683.1;Parent=gene1626;Note=methylates the MCP;Dbxref=InterPro:IPR000780,UniProtKB%2FTrEMBL:Q0WGA5,Genbank:YP_002346683.1,GeneID:1174516;gbkey=CDS;gene=cheR;product=chemotaxis methyltransferase CheR;protein_id=YP_002346683.1;transl_table=11
NC_003143.1	RefSeq	gene	1915533	1916582	.	+	.	ID=gene1627;Name=cheB;Dbxref=GeneID:1174517;gbkey=Gene;gene=cheB;locus_tag=YPO1679
NC_003143.1	RefSeq	CDS	1915533	1916582	.	+	0	ID=cds1556;Name=YP_002346684.1;Parent=gene1627;Note=regulates chemotaxis by demethylation of methyl-accepting chemotaxis proteins;Dbxref=InterPro:IPR000673,InterPro:IPR001789,InterPro:IPR008248,InterPro:IPR011006,UniProtKB%2FTrEMBL:Q0WGA4,Genbank:YP_002346684.1,GeneID:1174517;gbkey=CDS;gene=cheB;product=chemotaxis-specific methylesterase;protein_id=YP_002346684.1;transl_table=11
NC_003143.1	RefSeq	gene	1916683	1917072	.	+	.	ID=gene1628;Name=cheY;Dbxref=GeneID:1174518;gbkey=Gene;gene=cheY;locus_tag=YPO1680
NC_003143.1	RefSeq	CDS	1916683	1917072	.	+	0	ID=cds1557;Name=YP_002346685.1;Parent=gene1628;Note=chemotaxis regulator that%2C when phosphorylated%2C interacts with the flagellar motor causing the flagella to spin clockwise which causes the cell to tumble;Dbxref=InterPro:IPR001789,InterPro:IPR011006,UniProtKB%2FTrEMBL:Q0WGA3,Genbank:YP_002346685.1,GeneID:1174518;gbkey=CDS;gene=cheY;product=chemotaxis regulatory protein CheY;protein_id=YP_002346685.1;transl_table=11
NC_003143.1	RefSeq	gene	1917082	1917726	.	+	.	ID=gene1629;Name=cheZ;Dbxref=GeneID:1174519;gbkey=Gene;gene=cheZ;locus_tag=YPO1681
NC_003143.1	RefSeq	CDS	1917082	1917726	.	+	0	ID=cds1558;Name=YP_002346686.1;Parent=gene1629;Note=cytosolic phosphatase which functions in the chemotaxis signal transduction complex by controlling the level of phosphorylated CheY through dephosphorylation;Dbxref=InterPro:IPR007439,UniProtKB%2FTrEMBL:Q7CIX9,Genbank:YP_002346686.1,GeneID:1174519;gbkey=CDS;gene=cheZ;product=chemotaxis regulator CheZ;protein_id=YP_002346686.1;transl_table=11
NC_003143.1	RefSeq	gene	1918040	1918159	.	-	.	ID=gene1630;Name=YPO1682;Dbxref=GeneID:1174520;gbkey=Gene;locus_tag=YPO1682
NC_003143.1	RefSeq	CDS	1918040	1918159	.	-	0	ID=cds1559;Name=YP_002346687.1;Parent=gene1630;Dbxref=UniProtKB%2FTrEMBL:Q7CIX8,Genbank:YP_002346687.1,GeneID:1174520;gbkey=CDS;product=hypothetical protein;protein_id=YP_002346687.1;transl_table=11
NC_003143.1	RefSeq	gene	1918291	1919055	.	+	.	ID=gene1631;Name=YPO1683;Dbxref=GeneID:1174521;gbkey=Gene;locus_tag=YPO1683
NC_003143.1	RefSeq	CDS	1918291	1919055	.	+	0	ID=cds1560;Name=YP_002346688.1;Parent=gene1631;Dbxref=InterPro:IPR002502,UniProtKB%2FTrEMBL:Q7CIX7,Genbank:YP_002346688.1,GeneID:1174521;gbkey=CDS;product=N-acetylmuramoyl-L-alanine amidase;protein_id=YP_002346688.1;transl_table=11
NC_003143.1	RefSeq	gene	1919412	1921622	.	+	.	ID=gene1632;Name=YPO1684;Dbxref=GeneID:1174522;gbkey=Gene;locus_tag=YPO1684
NC_003143.1	RefSeq	CDS	1919412	1921622	.	+	0	ID=cds1561;Name=YP_008479705.1;Parent=gene1632;Dbxref=Genbank:YP_008479705.1,GeneID:1174522;gbkey=CDS;product=surface protein;protein_id=YP_008479705.1;transl_table=11
NC_003143.1	RefSeq	region	1919496	1919564	.	+	.	ID=id1166;Note=1 probable transmembrane helix predicted;Dbxref=GeneID:1174522;gbkey=misc_feature
NC_003143.1	RefSeq	gene	1922143	1923096	.	+	.	ID=gene1633;Name=YPO1686;Dbxref=GeneID:1174523;gbkey=Gene;locus_tag=YPO1686
NC_003143.1	RefSeq	CDS	1922143	1923096	.	+	0	ID=cds1562;Name=YP_002346689.1;Parent=gene1633;Dbxref=UniProtKB%2FTrEMBL:Q7CIX6,Genbank:YP_002346689.1,GeneID:1174523;gbkey=CDS;product=hypothetical protein;protein_id=YP_002346689.1;transl_table=11
NC_003143.1	RefSeq	gene	1923715	1924944	.	-	.	ID=gene1634;Name=alr;Dbxref=GeneID:1174524;gbkey=Gene;gene=alr;locus_tag=YPO1687
NC_003143.1	RefSeq	CDS	1923715	1924944	.	-	0	ID=cds1563;Name=YP_002346690.1;Parent=gene1634;Note=converts L-alanine to D-alanine which is used in cell wall biosynthesis%3B binds one pyridoxal phosphate per monomer%3B forms a homodimer;Dbxref=InterPro:IPR000821,InterPro:IPR001608,InterPro:IPR009006,InterPro:IPR011079,InterPro:IPR012155,UniProtKB%2FTrEMBL:Q0WG98,Genbank:YP_002346690.1,GeneID:1174524;gbkey=CDS;gene=alr;product=alanine racemase;protein_id=YP_002346690.1;transl_table=11
NC_003143.1	RefSeq	region	1924888	1924920	.	-	.	ID=id1167;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site.;Dbxref=GeneID:1174524;gbkey=misc_feature;gene=alr
NC_003143.1	RefSeq	gene	1925346	1925540	.	-	.	ID=gene1635;Name=YPO1687a;Dbxref=GeneID:16744757;gbkey=Gene;locus_tag=YPO1687a
NC_003143.1	RefSeq	CDS	1925346	1925540	.	-	0	ID=cds1564;Name=YP_008479706.1;Parent=gene1635;Dbxref=Genbank:YP_008479706.1,GeneID:16744757;gbkey=CDS;product=hypothetical protein;protein_id=YP_008479706.1;transl_table=11
NC_003143.1	RefSeq	gene	1926119	1926367	.	+	.	ID=gene1636;Name=YPO1688;Dbxref=GeneID:1174525;gbkey=Gene;locus_tag=YPO1688
NC_003143.1	RefSeq	CDS	1926119	1926367	.	+	0	ID=cds1565;Name=YP_002346691.1;Parent=gene1636;Note=No significant database hits;Dbxref=UniProtKB%2FTrEMBL:Q7CIX5,Genbank:YP_002346691.1,GeneID:1174525;gbkey=CDS;product=hypothetical protein;protein_id=YP_002346691.1;transl_table=11
NC_003143.1	RefSeq	gene	1926760	1928016	.	+	.	ID=gene1637;Name=YPO1689;Dbxref=GeneID:1174526;gbkey=Gene;locus_tag=YPO1689
NC_003143.1	RefSeq	CDS	1926760	1928016	.	+	0	ID=cds1566;Name=YP_002346692.1;Parent=gene1637;Dbxref=InterPro:IPR002641,UniProtKB%2FTrEMBL:Q7CIX4,Genbank:YP_002346692.1,GeneID:1174526;gbkey=CDS;product=lipoprotein;protein_id=YP_002346692.1;transl_table=11
NC_003143.1	RefSeq	region	1926796	1926828	.	+	.	ID=id1168;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site.;Dbxref=GeneID:1174526;gbkey=misc_feature
NC_003143.1	RefSeq	gene	1928171	1928404	.	+	.	ID=gene1638;Name=YPO1690;Dbxref=GeneID:1174527;gbkey=Gene;locus_tag=YPO1690
NC_003143.1	RefSeq	CDS	1928171	1928404	.	+	0	ID=cds1567;Name=YP_002346693.1;Parent=gene1638;Note=No significant database hits;Dbxref=UniProtKB%2FTrEMBL:Q74UB2,Genbank:YP_002346693.1,GeneID:1174527;gbkey=CDS;product=hypothetical protein;protein_id=YP_002346693.1;transl_table=11
NC_003143.1	RefSeq	repeat_region	1928873	1930826	.	-	.	ID=id1169;Note=insertion sequence:IS100;gbkey=repeat_region
NC_003143.1	RefSeq	repeat_region	1928873	1928900	.	+	.	ID=id1170;Note=IS100 inverted repeat;gbkey=repeat_region
NC_003143.1	RefSeq	gene	1928939	1929721	.	-	.	ID=gene1639;Name=YPO1691;Note=ypmt1.57c;Dbxref=GeneID:1174528;gbkey=Gene;locus_tag=YPO1691
NC_003143.1	RefSeq	CDS	1928939	1929721	.	-	0	ID=cds1568;Name=YP_002346694.1;Parent=gene1639;Dbxref=InterPro:IPR001270,InterPro:IPR002611,InterPro:IPR003593,UniProtKB%2FTrEMBL:Q7ARK4,Genbank:YP_002346694.1,GeneID:1174528;gbkey=CDS;product=transposase%2FIS protein;protein_id=YP_002346694.1;transl_table=11
NC_003143.1	RefSeq	region	1929371	1929394	.	-	.	ID=id1171;Note=PS00017 ATP%2FGTP-binding site motif A %28P-loop%29.;Dbxref=GeneID:1174528;gbkey=misc_feature
NC_003143.1	RefSeq	gene	1929718	1930740	.	-	.	ID=gene1640;Name=y1093;Dbxref=GeneID:1174529;gbkey=Gene;gene=y1093;gene_synonym=ypmt1;locus_tag=YPO1692
NC_003143.1	RefSeq	CDS	1929718	1930740	.	-	0	ID=cds1569;Name=YP_002346695.1;Parent=gene1640;Dbxref=InterPro:IPR001584,InterPro:IPR006120,InterPro:IPR009057,InterPro:IPR012287,InterPro:IPR012337,UniProtKB%2FTrEMBL:Q7ARN5,Genbank:YP_002346695.1,GeneID:1174529;gbkey=CDS;gene=y1093;product=transposase for insertion sequence IS100;protein_id=YP_002346695.1;transl_table=11
NC_003143.1	RefSeq	region	1930624	1930689	.	-	.	ID=id1172;Note=Predicted helix-turn-helix motif with score 2147 %28%2B6.50 SD%29 at aa 18-39%2C sequence MSSRAIARELGISRNTVKRYLQ;Dbxref=GeneID:1174529;gbkey=misc_feature;gene=y1093
NC_003143.1	RefSeq	repeat_region	1930799	1930826	.	-	.	ID=id1173;Note=IS100 inverted repeat;gbkey=repeat_region
NC_003143.1	RefSeq	gene	1931147	1931536	.	+	.	ID=gene1641;Name=YPO1693;Dbxref=GeneID:1174530;gbkey=Gene;locus_tag=YPO1693
NC_003143.1	RefSeq	CDS	1931147	1931536	.	+	0	ID=cds1570;Name=YP_002346696.1;Parent=gene1641;Dbxref=InterPro:IPR008314,InterPro:IPR009326,UniProtKB%2FTrEMBL:Q7CIX2,Genbank:YP_002346696.1,GeneID:1174530;gbkey=CDS;product=hypothetical protein;protein_id=YP_002346696.1;transl_table=11
NC_003143.1	RefSeq	gene	1931646	1931885	.	-	.	ID=gene1642;Name=YPO1694;Dbxref=GeneID:1174531;gbkey=Gene;locus_tag=YPO1694
NC_003143.1	RefSeq	CDS	1931646	1931885	.	-	0	ID=cds1571;Name=YP_002346697.1;Parent=gene1642;Dbxref=InterPro:IPR009950,UniProtKB%2FTrEMBL:Q7CIX1,Genbank:YP_002346697.1,GeneID:1174531;gbkey=CDS;product=hypothetical protein;protein_id=YP_002346697.1;transl_table=11
NC_003143.1	RefSeq	gene	1932093	1933082	.	-	.	ID=gene1643;Name=YPO1695;Dbxref=GeneID:1174532;gbkey=Gene;locus_tag=YPO1695
NC_003143.1	RefSeq	CDS	1932093	1933082	.	-	0	ID=cds1572;Name=YP_002346698.1;Parent=gene1643;Dbxref=InterPro:IPR007893,InterPro:IPR008966,UniProtKB%2FTrEMBL:Q7CIX0,Genbank:YP_002346698.1,GeneID:1174532;gbkey=CDS;product=hypothetical protein;protein_id=YP_002346698.1;transl_table=11
NC_003143.1	RefSeq	gene	1933288	1935735	.	-	.	ID=gene1644;Name=YPO1696;Dbxref=GeneID:1174533;gbkey=Gene;locus_tag=YPO1696
NC_003143.1	RefSeq	CDS	1933288	1935735	.	-	0	ID=cds1573;Name=YP_002346699.1;Parent=gene1644;Dbxref=InterPro:IPR000015,UniProtKB%2FTrEMBL:Q7CIW9,Genbank:YP_002346699.1,GeneID:1174533;gbkey=CDS;product=outer membrane usher protein;protein_id=YP_002346699.1;transl_table=11
NC_003143.1	RefSeq	gene	1935923	1936675	.	-	.	ID=gene1645;Name=YPO1697;Dbxref=GeneID:1174534;gbkey=Gene;locus_tag=YPO1697
NC_003143.1	RefSeq	CDS	1935923	1936675	.	-	0	ID=cds1574;Name=YP_002346700.1;Parent=gene1645;Dbxref=InterPro:IPR001829,InterPro:IPR008962,UniProtKB%2FTrEMBL:Q7CIW8,Genbank:YP_002346700.1,GeneID:1174534;gbkey=CDS;product=chaperone protein;protein_id=YP_002346700.1;transl_table=11
NC_003143.1	RefSeq	gene	1936706	1937263	.	-	.	ID=gene1646;Name=YPO1698;Dbxref=GeneID:1174535;gbkey=Gene;locus_tag=YPO1698
NC_003143.1	RefSeq	CDS	1936706	1937263	.	-	0	ID=cds1575;Name=YP_002346701.1;Parent=gene1646;Dbxref=InterPro:IPR000425,InterPro:IPR007893,InterPro:IPR008966,UniProtKB%2FTrEMBL:Q0WG87,Genbank:YP_002346701.1,GeneID:1174535;gbkey=CDS;product=hypothetical protein;protein_id=YP_002346701.1;transl_table=11
NC_003143.1	RefSeq	region	1936976	1937002	.	-	.	ID=id1174;Note=PS00221 MIP family signature.;Dbxref=GeneID:1174535;gbkey=misc_feature
NC_003143.1	RefSeq	gene	1937284	1937814	.	-	.	ID=gene1647;Name=YPO1699;Dbxref=GeneID:1174536;gbkey=Gene;locus_tag=YPO1699
NC_003143.1	RefSeq	CDS	1937284	1937814	.	-	0	ID=cds1576;Name=YP_002346702.1;Parent=gene1647;Dbxref=InterPro:IPR007893,UniProtKB%2FTrEMBL:Q0WG86,Genbank:YP_002346702.1,GeneID:1174536;gbkey=CDS;product=hypothetical protein;protein_id=YP_002346702.1;transl_table=11
NC_003143.1	RefSeq	gene	1937820	1938374	.	-	.	ID=gene1648;Name=YPO1700;Dbxref=GeneID:1174537;gbkey=Gene;locus_tag=YPO1700
NC_003143.1	RefSeq	CDS	1937820	1938374	.	-	0	ID=cds1577;Name=YP_002346703.1;Parent=gene1648;Dbxref=InterPro:IPR007893,UniProtKB%2FTrEMBL:Q7CIW7,Genbank:YP_002346703.1,GeneID:1174537;gbkey=CDS;product=hypothetical protein;protein_id=YP_002346703.1;transl_table=11
NC_003143.1	RefSeq	gene	1938853	1941504	.	-	.	ID=gene1649;Name=YPO1701;Dbxref=GeneID:1174538;gbkey=Gene;locus_tag=YPO1701
NC_003143.1	RefSeq	CDS	1938853	1941504	.	-	0	ID=cds1578;Name=YP_002346704.1;Parent=gene1649;Dbxref=InterPro:IPR003399,UniProtKB%2FTrEMBL:Q0WG84,Genbank:YP_002346704.1,GeneID:1174538;gbkey=CDS;product=hypothetical protein;protein_id=YP_002346704.1;transl_table=11
NC_003143.1	RefSeq	gene	1941473	1942825	.	-	.	ID=gene1650;Name=yebS;Dbxref=GeneID:1174539;gbkey=Gene;gene=yebS;locus_tag=YPO1702
NC_003143.1	RefSeq	CDS	1941473	1942825	.	-	0	ID=cds1579;Name=YP_002346705.1;Parent=gene1650;Dbxref=InterPro:IPR005219,InterPro:IPR007498,InterPro:IPR011031,UniProtKB%2FTrEMBL:Q7CIW6,Genbank:YP_002346705.1,GeneID:1174539;gbkey=CDS;gene=yebS;product=hypothetical protein;protein_id=YP_002346705.1;transl_table=11
NC_003143.1	RefSeq	gene	1942952	1943449	.	+	.	ID=gene1651;Name=YPO1703;Dbxref=GeneID:1174540;gbkey=Gene;locus_tag=YPO1703
NC_003143.1	RefSeq	CDS	1942952	1943449	.	+	0	ID=cds1580;Name=YP_002346706.1;Parent=gene1651;Dbxref=InterPro:IPR003018,UniProtKB%2FTrEMBL:Q74UI8,Genbank:YP_002346706.1,GeneID:1174540;gbkey=CDS;product=hypothetical protein;protein_id=YP_002346706.1;transl_table=11
NC_003143.1	RefSeq	gene	1943545	1944258	.	+	.	ID=gene1652;Name=proQ;Dbxref=GeneID:1174541;gbkey=Gene;gene=proQ;locus_tag=YPO1704
NC_003143.1	RefSeq	CDS	1943545	1944258	.	+	0	ID=cds1581;Name=YP_002346707.1;Parent=gene1652;Note=affects solute and DNA transport through an unknown mechanism;Dbxref=InterPro:IPR007447,UniProtKB%2FTrEMBL:Q0WG81,Genbank:YP_002346707.1,GeneID:1174541;gbkey=CDS;gene=proQ;product=solute%2FDNA competence effector;protein_id=YP_002346707.1;transl_table=11
NC_003143.1	RefSeq	gene	1944278	1946350	.	+	.	ID=gene1653;Name=prc;Dbxref=GeneID:1174542;gbkey=Gene;gene=prc;gene_synonym=tsp;locus_tag=YPO1705
NC_003143.1	RefSeq	CDS	1944278	1946350	.	+	0	ID=cds1582;Name=YP_002346708.1;Parent=gene1653;Note=Involved in the cleavage of a C-terminal peptide of 11 residues from the precursor form of penicillin-binding protein 3;Dbxref=InterPro:IPR001478,InterPro:IPR004447,InterPro:IPR005151,UniProtKB%2FTrEMBL:Q0WG80,Genbank:YP_002346708.1,GeneID:1174542;gbkey=CDS;gene=prc;product=carboxy-terminal protease;protein_id=YP_002346708.1;transl_table=11
NC_003143.1	RefSeq	gene	1946824	1947705	.	+	.	ID=gene1654;Name=htpX;Dbxref=GeneID:1174543;gbkey=Gene;gene=htpX;locus_tag=YPO1706
NC_003143.1	RefSeq	CDS	1946824	1947705	.	+	0	ID=cds1583;Name=YP_002346709.1;Parent=gene1654;Note=metalloprotease;Dbxref=InterPro:IPR001915,InterPro:IPR006025,InterPro:IPR009481,UniProtKB%2FTrEMBL:Q0WG79,Genbank:YP_002346709.1,GeneID:1174543;gbkey=CDS;gene=htpX;product=heat shock protein HtpX;protein_id=YP_002346709.1;transl_table=11
NC_003143.1	RefSeq	region	1947598	1947621	.	+	.	ID=id1175;Note=PS00017 ATP%2FGTP-binding site motif A %28P-loop%29.;Dbxref=GeneID:1174543;gbkey=misc_feature;gene=htpX
NC_003143.1	RefSeq	gene	1948363	1948905	.	+	.	ID=gene1655;Name=YPO1707;Dbxref=GeneID:1174544;gbkey=Gene;locus_tag=YPO1707
NC_003143.1	RefSeq	CDS	1948363	1948905	.	+	0	ID=cds1584;Name=YP_002346710.1;Parent=gene1655;Dbxref=InterPro:IPR000259,InterPro:IPR008966,UniProtKB%2FTrEMBL:Q7CIW5,Genbank:YP_002346710.1,GeneID:1174544;gbkey=CDS;product=fimbrial protein;protein_id=YP_002346710.1;transl_table=11
NC_003143.1	RefSeq	gene	1949058	1949837	.	+	.	ID=gene1656;Name=ecpD;Dbxref=GeneID:1174545;gbkey=Gene;gene=ecpD;locus_tag=YPO1708
NC_003143.1	RefSeq	CDS	1949058	1949837	.	+	0	ID=cds1585;Name=YP_002346711.1;Parent=gene1656;Dbxref=InterPro:IPR001829,InterPro:IPR008962,UniProtKB%2FTrEMBL:Q7CIW4,Genbank:YP_002346711.1,GeneID:1174545;gbkey=CDS;gene=ecpD;product=chaperone protein;protein_id=YP_002346711.1;transl_table=11
NC_003143.1	RefSeq	region	1949394	1949447	.	+	.	ID=id1176;Note=PS00635 Gram-negative pili assembly chaperone signature.;Dbxref=GeneID:1174545;gbkey=misc_feature;gene=ecpD
NC_003143.1	RefSeq	gene	1949919	1952531	.	+	.	ID=gene1657;Name=htrE;Dbxref=GeneID:1174546;gbkey=Gene;gene=htrE;locus_tag=YPO1709
NC_003143.1	RefSeq	CDS	1949919	1952531	.	+	0	ID=cds1586;Name=YP_002346712.1;Parent=gene1657;Dbxref=InterPro:IPR000015,InterPro:IPR001920,UniProtKB%2FTrEMBL:Q7CIW3,Genbank:YP_002346712.1,GeneID:1174546;gbkey=CDS;gene=htrE;product=outer membrane usher protein;protein_id=YP_002346712.1;transl_table=11
NC_003143.1	RefSeq	region	1950867	1950899	.	+	.	ID=id1177;Note=PS01151 Fimbrial biogenesis outer membrane usher protein signature.;Dbxref=GeneID:1174546;gbkey=misc_feature;gene=htrE
NC_003143.1	RefSeq	gene	1952528	1953691	.	+	.	ID=gene1658;Name=htrE;Dbxref=GeneID:1174547;gbkey=Gene;gene=htrE;locus_tag=YPO1710
NC_003143.1	RefSeq	CDS	1952528	1953691	.	+	0	ID=cds1587;Name=YP_002346713.1;Parent=gene1658;Dbxref=InterPro:IPR000259,InterPro:IPR008966,UniProtKB%2FTrEMBL:Q0WG75,Genbank:YP_002346713.1,GeneID:1174547;gbkey=CDS;product=fimbrial protein;protein_id=YP_002346713.1;transl_table=11
NC_003143.1	RefSeq	gene	1953688	1954491	.	+	.	ID=gene1659;Name=YPO1711;Dbxref=GeneID:1174548;gbkey=Gene;locus_tag=YPO1711
NC_003143.1	RefSeq	CDS	1953688	1954491	.	+	0	ID=cds1588;Name=YP_002346714.1;Parent=gene1659;Dbxref=InterPro:IPR001829,InterPro:IPR008962,UniProtKB%2FTrEMBL:Q7CIW2,Genbank:YP_002346714.1,GeneID:1174548;gbkey=CDS;product=chaperone protein;protein_id=YP_002346714.1;transl_table=11
NC_003143.1	RefSeq	region	1954045	1954098	.	+	.	ID=id1178;Note=PS00635 Gram-negative pili assembly chaperone signature.;Dbxref=GeneID:1174548;gbkey=misc_feature
NC_003143.1	RefSeq	gene	1954545	1955912	.	-	.	ID=gene1660;Name=YPO1712;Dbxref=GeneID:1174549;gbkey=Gene;locus_tag=YPO1712
NC_003143.1	RefSeq	CDS	1954545	1955912	.	-	0	ID=cds1589;Name=YP_002346715.1;Parent=gene1660;Dbxref=InterPro:IPR001411,InterPro:IPR007114,InterPro:IPR011701,UniProtKB%2FTrEMBL:Q7CIW1,Genbank:YP_002346715.1,GeneID:1174549;gbkey=CDS;product=transport protein;protein_id=YP_002346715.1;transl_table=11
NC_003143.1	RefSeq	gene	1956239	1957405	.	+	.	ID=gene1661;Name=ogl;Dbxref=GeneID:1174550;gbkey=Gene;gene=ogl;locus_tag=YPO1713
NC_003143.1	RefSeq	CDS	1956239	1957405	.	+	0	ID=cds1590;Name=YP_002346716.1;Parent=gene1661;Dbxref=InterPro:IPR011045,InterPro:IPR011659,UniProtKB%2FTrEMBL:Q7CIW0,Genbank:YP_002346716.1,GeneID:1174550;gbkey=CDS;gene=ogl;product=oligogalacturonate lyase;protein_id=YP_002346716.1;transl_table=11
NC_003143.1	RefSeq	gene	1957592	1958383	.	+	.	ID=gene1662;Name=kdgR;Dbxref=GeneID:1174551;gbkey=Gene;gene=kdgR;locus_tag=YPO1714
NC_003143.1	RefSeq	CDS	1957592	1958383	.	+	0	ID=cds1591;Name=YP_002346717.1;Parent=gene1662;Dbxref=InterPro:IPR005471,InterPro:IPR011991,UniProtKB%2FTrEMBL:Q7CIV9,Genbank:YP_002346717.1,GeneID:1174551;gbkey=CDS;gene=kdgR;product=IclR family transcriptional regulator;protein_id=YP_002346717.1;transl_table=11
NC_003143.1	RefSeq	region	1957685	1957750	.	+	.	ID=id1179;Note=Predicted helix-turn-helix motif with score 1732 %28%2B5.09 SD%29 at aa 32-53%2C sequence IGITELSQRVMMPKSTVYRFLQ;Dbxref=GeneID:1174551;gbkey=misc_feature;gene=kdgR
NC_003143.1	RefSeq	gene	1958768	1959619	.	+	.	ID=gene1663;Name=ybjR;Dbxref=GeneID:1174552;gbkey=Gene;gene=ybjR;gene_synonym=ybjR;locus_tag=YPO1715
NC_003143.1	RefSeq	CDS	1958768	1959619	.	+	0	ID=cds1592;Name=YP_002346718.1;Parent=gene1663;Dbxref=InterPro:IPR002477,InterPro:IPR002502,InterPro:IPR009070,UniProtKB%2FTrEMBL:Q7CIV8,Genbank:YP_002346718.1,GeneID:1174552;gbkey=CDS;gene=ybjR;product=N-acetylmuramoyl-L-alanine amidase;protein_id=YP_002346718.1;transl_table=11
NC_003143.1	RefSeq	region	1958783	1958815	.	+	.	ID=id1180;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site.;Dbxref=GeneID:1174552;gbkey=misc_feature;gene=ybjR
NC_003143.1	RefSeq	gene	1959834	1961231	.	-	.	ID=gene1664;Name=gltP;Dbxref=GeneID:1174553;gbkey=Gene;gene=gltP;locus_tag=YPO1716
NC_003143.1	RefSeq	CDS	1959834	1961231	.	-	0	ID=cds1593;Name=YP_002346719.1;Parent=gene1664;Dbxref=InterPro:IPR001991,UniProtKB%2FTrEMBL:Q7CIV7,Genbank:YP_002346719.1,GeneID:1174553;gbkey=CDS;gene=gltP;product=transport protein;protein_id=YP_002346719.1;transl_table=11
NC_003143.1	RefSeq	gene	1961429	1961977	.	-	.	ID=gene1665;Name=ydjM;Dbxref=GeneID:1174554;gbkey=Gene;gene=ydjM;locus_tag=YPO1717
NC_003143.1	RefSeq	CDS	1961429	1961977	.	-	0	ID=cds1594;Name=YP_002346720.1;Parent=gene1665;Dbxref=InterPro:IPR007404,UniProtKB%2FTrEMBL:Q7CIV6,Genbank:YP_002346720.1,GeneID:1174554;gbkey=CDS;gene=ydjM;product=hypothetical protein;protein_id=YP_002346720.1;transl_table=11
NC_003143.1	RefSeq	gene	1962457	1963167	.	-	.	ID=gene1666;Name=YPO1718;Dbxref=GeneID:1174555;gbkey=Gene;locus_tag=YPO1718
NC_003143.1	RefSeq	CDS	1962457	1963167	.	-	0	ID=cds1595;Name=YP_002346721.1;Parent=gene1666;Dbxref=InterPro:IPR009331,UniProtKB%2FTrEMBL:Q7CIV5,Genbank:YP_002346721.1,GeneID:1174555;gbkey=CDS;product=hypothetical protein;protein_id=YP_002346721.1;transl_table=11
NC_003143.1	RefSeq	gene	1963465	1964757	.	-	.	ID=gene1667;Name=YPO1719;Dbxref=GeneID:1174556;gbkey=Gene;locus_tag=YPO1719
NC_003143.1	RefSeq	CDS	1963465	1964757	.	-	0	ID=cds1596;Name=YP_002346722.1;Parent=gene1667;Dbxref=InterPro:IPR006059,UniProtKB%2FTrEMBL:Q7CIV4,Genbank:YP_002346722.1,GeneID:1174556;gbkey=CDS;product=sugar-binding protein;protein_id=YP_002346722.1;transl_table=11
NC_003143.1	RefSeq	gene	1964773	1965900	.	-	.	ID=gene1668;Name=YPO1720;Dbxref=GeneID:1174557;gbkey=Gene;locus_tag=YPO1720
NC_003143.1	RefSeq	CDS	1964773	1965900	.	-	0	ID=cds1597;Name=YP_002346723.1;Parent=gene1668;Dbxref=InterPro:IPR003439,InterPro:IPR003593,InterPro:IPR008995,InterPro:IPR013611,UniProtKB%2FTrEMBL:Q7CIV3,Genbank:YP_002346723.1,GeneID:1174557;gbkey=CDS;product=sugar ABC transporter;protein_id=YP_002346723.1;transl_table=11
NC_003143.1	RefSeq	region	1965454	1965498	.	-	.	ID=id1181;Note=PS00211 ABC transporters family signature.;Dbxref=GeneID:1174557;gbkey=misc_feature
NC_003143.1	RefSeq	gene	1965914	1966834	.	-	.	ID=gene1669;Name=YPO1721;Dbxref=GeneID:1174558;gbkey=Gene;locus_tag=YPO1721
NC_003143.1	RefSeq	CDS	1965914	1966834	.	-	0	ID=cds1598;Name=YP_002346724.1;Parent=gene1669;Dbxref=InterPro:IPR000515,UniProtKB%2FTrEMBL:Q74UH2,Genbank:YP_002346724.1,GeneID:1174558;gbkey=CDS;product=sugar ABC transporter %28permease%29;protein_id=YP_002346724.1;transl_table=11
NC_003143.1	RefSeq	region	1966181	1966267	.	-	.	ID=id1182;Note=PS00402 Binding-protein-dependent transport systems inner membrane comp. sign.;Dbxref=GeneID:1174558;gbkey=misc_feature
NC_003143.1	RefSeq	gene	1966827	1967717	.	-	.	ID=gene1670;Name=YPO1722;Dbxref=GeneID:1174559;gbkey=Gene;locus_tag=YPO1722
NC_003143.1	RefSeq	CDS	1966827	1967717	.	-	0	ID=cds1599;Name=YP_002346725.1;Parent=gene1670;Dbxref=InterPro:IPR000515,UniProtKB%2FTrEMBL:Q7CIV2,Genbank:YP_002346725.1,GeneID:1174559;gbkey=CDS;product=sugar ABC transporter permease;protein_id=YP_002346725.1;transl_table=11
NC_003143.1	RefSeq	region	1967109	1967195	.	-	.	ID=id1183;Note=PS00402 Binding-protein-dependent transport systems inner membrane comp. sign.;Dbxref=GeneID:1174559;gbkey=misc_feature
NC_003143.1	RefSeq	gene	1967758	1969425	.	-	.	ID=gene1671;Name=kdgC;Dbxref=GeneID:1174560;gbkey=Gene;gene=kdgC;gene_synonym=pelW;locus_tag=YPO1723
NC_003143.1	RefSeq	CDS	1967758	1969425	.	-	0	ID=cds1600;Name=YP_002346726.1;Parent=gene1671;Dbxref=InterPro:IPR010702,UniProtKB%2FTrEMBL:Q7CIV1,Genbank:YP_002346726.1,GeneID:1174560;gbkey=CDS;gene=kdgC;product=exopolygalacturonate lyase;protein_id=YP_002346726.1;transl_table=11
NC_003143.1	RefSeq	gene	1969761	1970522	.	-	.	ID=gene1672;Name=kduD1;Dbxref=GeneID:1174561;gbkey=Gene;gene=kduD1;locus_tag=YPO1724
NC_003143.1	RefSeq	CDS	1969761	1970522	.	-	0	ID=cds1601;Name=YP_002346727.1;Parent=gene1672;Note=catalyzes the formation of 3-dehydro-2-deoxy-D-gluconate from 2-deoxy-D-gluconate;Dbxref=InterPro:IPR002198,InterPro:IPR002347,InterPro:IPR011286,UniProtKB%2FTrEMBL:Q0WG61,Genbank:YP_002346727.1,GeneID:1174561;gbkey=CDS;gene=kduD1;product=2-deoxy-D-gluconate 3-dehydrogenase;protein_id=YP_002346727.1;transl_table=11
NC_003143.1	RefSeq	region	1970004	1970090	.	-	.	ID=id1184;Note=PS00061 Short-chain dehydrogenases%2Freductases family signature.;Dbxref=GeneID:1174561;gbkey=misc_feature;gene=kduD1
NC_003143.1	RefSeq	gene	1970614	1971450	.	-	.	ID=gene1673;Name=kduI;Dbxref=GeneID:1174562;gbkey=Gene;gene=kduI;locus_tag=YPO1725
NC_003143.1	RefSeq	CDS	1970614	1971450	.	-	0	ID=cds1602;Name=YP_002346728.1;Parent=gene1673;Note=4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase%3B catalyzes the interconversion of 4-deoxy-L-threo-5-hexosulose uronate to 3-deoxy-D-glycero-2%2C5-hexodiulosonate;Dbxref=InterPro:IPR007045,InterPro:IPR011051,UniProtKB%2FTrEMBL:Q0WG60,Genbank:YP_002346728.1,GeneID:1174562;gbkey=CDS;gene=kduI;product=5-keto-4-deoxyuronate isomerase;protein_id=YP_002346728.1;transl_table=11
NC_003143.1	RefSeq	gene	1971786	1972112	.	+	.	ID=gene1674;Name=kdgF;Dbxref=GeneID:1174563;gbkey=Gene;gene=kdgF;locus_tag=YPO1726;pseudo=true
NC_003143.1	RefSeq	region	1971786	1972112	.	+	.	ID=id1185;Note=Similar to Erwinia chrysanthemi pectin degradation protein KdgF SW:KDGF_ERWCH %28Q05527%29 %28110 aa%29 fasta scores: E%28%29: 0%2C 80.7%25 id in 109 aa%2C and to Bacillus halodurans pectin degradation protein KdgF TR:Q9KFI3 %28EMBL:AP001508%29 %28108 aa%29 fasta scores: E%28%29: 1.8e-09%2C 37.8%25 id in 98 aa. This CDS may have been disrupted by the insertion of IS285 element. This insertion occurred very near the C-terminal end%2C replacing the last aa at the C-terminal end with 7 aa encoded within the IS element. It is not clear whether this insertion affects the function of the protein.;Dbxref=GeneID:1174563;gbkey=misc_feature;gene=kdgF;pseudo=true
NC_003143.1	RefSeq	repeat_region	1972113	1973427	.	+	.	ID=id1186;Note=insertion sequence:IS285;gbkey=repeat_region
NC_003143.1	RefSeq	repeat_region	1972113	1972141	.	+	.	ID=id1187;Note=IS285 inverted repeat;gbkey=repeat_region
NC_003143.1	RefSeq	gene	1972184	1973392	.	+	.	ID=gene1675;Name=y1062;Dbxref=GeneID:1174564;gbkey=Gene;gene=y1062;gene_synonym=ypmt1.80C;locus_tag=YPO1727
NC_003143.1	RefSeq	CDS	1972184	1973392	.	+	0	ID=cds1603;Name=YP_002346729.1;Parent=gene1675;Dbxref=InterPro:IPR001207,UniProtKB%2FTrEMBL:Q7ARB0,Genbank:YP_002346729.1,GeneID:1174564;gbkey=CDS;gene=y1062;product=transposase for the IS285 insertion element;protein_id=YP_002346729.1;transl_table=11
NC_003143.1	RefSeq	region	1972877	1972951	.	+	.	ID=id1188;Note=PS01007 Transposases%2C Mutator family%2C signature.;Dbxref=GeneID:1174564;gbkey=misc_feature;gene=y1062
NC_003143.1	RefSeq	repeat_region	1973399	1973427	.	-	.	ID=id1189;Note=IS285 inverted repeat;gbkey=repeat_region
NC_003143.1	RefSeq	region	1973867	1974676	.	+	.	ID=id1190;Note=This CDS is disrupted by the insertion of IS100. The full length CDS is similar to Escherichia coli raffinose operon repressor RafR SW:RAFR_ECOLI %28P21867%29 %28335 aa%29 fasta scores: E%28%29: 0%2C 49.4%25 id in 332 aa;Dbxref=PSEUDO:CAL20371.1;gbkey=misc_feature;part=1%2F2;pseudo=true
NC_003143.1	RefSeq	region	1976636	1976842	.	+	.	ID=id1190;Note=This CDS is disrupted by the insertion of IS100. The full length CDS is similar to Escherichia coli raffinose operon repressor RafR SW:RAFR_ECOLI %28P21867%29 %28335 aa%29 fasta scores: E%28%29: 0%2C 49.4%25 id in 332 aa;Dbxref=PSEUDO:CAL20371.1;gbkey=misc_feature;part=2%2F2;pseudo=true
NC_003143.1	RefSeq	region	1973867	1973932	.	+	.	ID=id1191;Note=Predicted helix-turn-helix motif with score 2098 %28%2B6.33 SD%29 at aa 1-22%2C sequence MSLKKIANELGLSSTTVSRALN;gbkey=misc_feature
NC_003143.1	RefSeq	region	1974674	1974681	.	+	.	ID=id1192;Note=Sequence duplication around IS insertion;gbkey=misc_feature
NC_003143.1	RefSeq	repeat_region	1974682	1976635	.	+	.	ID=id1193;Note=insertion sequence:IS100;gbkey=repeat_region
NC_003143.1	RefSeq	repeat_region	1974682	1974709	.	+	.	ID=id1194;Note=IS100 inverted repeat;gbkey=repeat_region
NC_003143.1	RefSeq	gene	1974768	1975790	.	+	.	ID=gene1676;Name=y1093;Dbxref=GeneID:1174566;gbkey=Gene;gene=y1093;gene_synonym=ypmt1;locus_tag=YPO1729
NC_003143.1	RefSeq	CDS	1974768	1975790	.	+	0	ID=cds1604;Name=YP_002346730.1;Parent=gene1676;Dbxref=InterPro:IPR001584,InterPro:IPR006120,InterPro:IPR009057,InterPro:IPR012287,InterPro:IPR012337,UniProtKB%2FTrEMBL:Q7ARN5,Genbank:YP_002346730.1,GeneID:1174566;gbkey=CDS;gene=y1093;product=transposase for insertion sequence IS100;protein_id=YP_002346730.1;transl_table=11
NC_003143.1	RefSeq	region	1974819	1974884	.	+	.	ID=id1195;Note=Predicted helix-turn-helix motif with score 2147 %28%2B6.50 SD%29 at aa 18-39%2C sequence MSSRAIARELGISRNTVKRYLQ;Dbxref=GeneID:1174566;gbkey=misc_feature;gene=y1093
NC_003143.1	RefSeq	gene	1975787	1976569	.	+	.	ID=gene1677;Name=YPO1730;Note=ypmt1.57c;Dbxref=GeneID:1174567;gbkey=Gene;locus_tag=YPO1730
NC_003143.1	RefSeq	CDS	1975787	1976569	.	+	0	ID=cds1605;Name=YP_002346731.1;Parent=gene1677;Dbxref=InterPro:IPR001270,InterPro:IPR002611,InterPro:IPR003593,UniProtKB%2FTrEMBL:Q7ARK4,Genbank:YP_002346731.1,GeneID:1174567;gbkey=CDS;product=transposase%2FIS protein;protein_id=YP_002346731.1;transl_table=11
NC_003143.1	RefSeq	region	1976114	1976137	.	+	.	ID=id1196;Note=PS00017 ATP%2FGTP-binding site motif A %28P-loop%29.;Dbxref=GeneID:1174567;gbkey=misc_feature
NC_003143.1	RefSeq	repeat_region	1976608	1976635	.	-	.	ID=id1197;Note=IS100 inverted repeat;gbkey=repeat_region
NC_003143.1	RefSeq	region	1976636	1976644	.	+	.	ID=id1198;Note=sequence duplication around IS insertion;gbkey=misc_feature
NC_003143.1	RefSeq	gene	1976985	1977060	.	-	.	ID=gene1678;Name=YPt_21;Dbxref=GeneID:1174568;gbkey=Gene;locus_tag=YPt_21
NC_003143.1	RefSeq	tRNA	1976985	1977060	.	-	.	ID=rna33;Parent=gene1678;Note=tRNA Asn anticodon GTT%2C Cove score 87.13;Dbxref=GeneID:1174568;gbkey=tRNA;product=tRNA-Asn
NC_003143.1	RefSeq	exon	1976985	1977060	.	-	.	ID=id1199;Parent=rna33;Note=tRNA Asn anticodon GTT%2C Cove score 87.13;Dbxref=GeneID:1174568;gbkey=tRNA;product=tRNA-Asn
NC_003143.1	RefSeq	gene	1977238	1978050	.	-	.	ID=gene1679;Name=YPO1732;Dbxref=GeneID:1174569;gbkey=Gene;locus_tag=YPO1732
NC_003143.1	RefSeq	CDS	1977238	1978050	.	-	0	ID=cds1606;Name=YP_002346732.1;Parent=gene1679;Dbxref=InterPro:IPR010384,UniProtKB%2FTrEMBL:Q7CHU1,Genbank:YP_002346732.1,GeneID:1174569;gbkey=CDS;product=hypothetical protein;protein_id=YP_002346732.1;transl_table=11
NC_003143.1	RefSeq	gene	1978440	1978724	.	-	.	ID=gene1680;Name=YPO1733;Dbxref=GeneID:1174570;gbkey=Gene;locus_tag=YPO1733
NC_003143.1	RefSeq	CDS	1978440	1978724	.	-	0	ID=cds1607;Name=YP_002346733.1;Parent=gene1680;Dbxref=InterPro:IPR005545,UniProtKB%2FTrEMBL:Q0WG55,Genbank:YP_002346733.1,GeneID:1174570;gbkey=CDS;product=hypothetical protein;protein_id=YP_002346733.1;transl_table=11
NC_003143.1	RefSeq	gene	1978961	1979812	.	-	.	ID=gene1681;Name=YPO1734;Dbxref=GeneID:1174571;gbkey=Gene;locus_tag=YPO1734
NC_003143.1	RefSeq	CDS	1978961	1979812	.	-	0	ID=cds1608;Name=YP_002346734.1;Parent=gene1681;Dbxref=InterPro:IPR000687,InterPro:IPR011009,UniProtKB%2FTrEMBL:Q7CHU2,Genbank:YP_002346734.1,GeneID:1174571;gbkey=CDS;product=hypothetical protein;protein_id=YP_002346734.1;transl_table=11
NC_003143.1	RefSeq	region	1979285	1979323	.	-	.	ID=id1200;Note=PS00109 Tyrosine protein kinases specific active-site signature.;Dbxref=GeneID:1174571;gbkey=misc_feature
NC_003143.1	RefSeq	region	1979288	1979323	.	-	.	ID=id1201;Note=PS01245 RIO1%2FZK632.3%2FMJ0444 family signature.;Dbxref=GeneID:1174571;gbkey=misc_feature
NC_003143.1	RefSeq	gene	1979915	1981633	.	-	.	ID=gene1682;Name=YPO1735;Dbxref=GeneID:1174572;gbkey=Gene;locus_tag=YPO1735
NC_003143.1	RefSeq	CDS	1979915	1981633	.	-	0	ID=cds1609;Name=YP_002346735.1;Parent=gene1682;Dbxref=InterPro:IPR001140,InterPro:IPR003439,InterPro:IPR003593,InterPro:IPR011527,UniProtKB%2FTrEMBL:Q7CHU3,Genbank:YP_002346735.1,GeneID:1174572;gbkey=CDS;product=ABC transporter ATP-binding protein;protein_id=YP_002346735.1;transl_table=11
NC_003143.1	RefSeq	region	1980182	1980226	.	-	.	ID=id1202;Note=PS00211 ABC transporters family signature.;Dbxref=GeneID:1174572;gbkey=misc_feature
NC_003143.1	RefSeq	region	1980515	1980538	.	-	.	ID=id1203;Note=PS00017 ATP%2FGTP-binding site motif A %28P-loop%29.;Dbxref=GeneID:1174572;gbkey=misc_feature
NC_003143.1	RefSeq	gene	1982289	1982453	.	+	.	ID=gene1683;Name=YPO1736;Dbxref=GeneID:1174573;gbkey=Gene;locus_tag=YPO1736
NC_003143.1	RefSeq	CDS	1982289	1982453	.	+	0	ID=cds1610;Name=YP_002346736.1;Parent=gene1683;Dbxref=UniProtKB%2FTrEMBL:Q7CHU4,Genbank:YP_002346736.1,GeneID:1174573;gbkey=CDS;product=hypothetical protein;protein_id=YP_002346736.1;transl_table=11
NC_003143.1	RefSeq	region	1982325	1982393	.	+	.	ID=id1204;Note=1 probable transmembrane helix predicted;Dbxref=GeneID:1174573;gbkey=misc_feature
NC_003143.1	RefSeq	gene	1982535	1982921	.	-	.	ID=gene1684;Name=YPO1737;Dbxref=GeneID:1174574;gbkey=Gene;locus_tag=YPO1737
NC_003143.1	RefSeq	CDS	1982535	1982921	.	-	0	ID=cds1611;Name=YP_002346737.1;Parent=gene1684;Dbxref=InterPro:IPR000005,InterPro:IPR009057,InterPro:IPR012287,UniProtKB%2FTrEMBL:Q7CHU5,Genbank:YP_002346737.1,GeneID:1174574;gbkey=CDS;product=AraC family transcriptional regulator;protein_id=YP_002346737.1;transl_table=11
NC_003143.1	RefSeq	gene	1983477	1983716	.	+	.	ID=gene1685;Name=YPO1738;Dbxref=GeneID:1174575;gbkey=Gene;locus_tag=YPO1738
NC_003143.1	RefSeq	CDS	1983477	1983716	.	+	0	ID=cds1612;Name=YP_002346738.1;Parent=gene1685;Dbxref=UniProtKB%2FTrEMBL:Q0WG50,Genbank:YP_002346738.1,GeneID:1174575;gbkey=CDS;product=hypothetical protein;protein_id=YP_002346738.1;transl_table=11
NC_003143.1	RefSeq	gene	1983807	1984025	.	-	.	ID=gene1686;Name=YPO1739;Dbxref=GeneID:1174576;gbkey=Gene;locus_tag=YPO1739
NC_003143.1	RefSeq	CDS	1983807	1984025	.	-	0	ID=cds1613;Name=YP_002346739.1;Parent=gene1686;Dbxref=UniProtKB%2FTrEMBL:Q0WG49,Genbank:YP_002346739.1,GeneID:1174576;gbkey=CDS;product=hypothetical protein;protein_id=YP_002346739.1;transl_table=11
NC_003143.1	RefSeq	region	1983963	1984019	.	-	.	ID=id1205;Note=1 probable transmembrane helix predicted;Dbxref=GeneID:1174576;gbkey=misc_feature
NC_003143.1	RefSeq	gene	1984623	1984898	.	+	.	ID=gene1687;Name=YPO1740;Dbxref=GeneID:1174577;gbkey=Gene;locus_tag=YPO1740
NC_003143.1	RefSeq	CDS	1984623	1984898	.	+	0	ID=cds1614;Name=YP_002346740.1;Parent=gene1687;Dbxref=UniProtKB%2FTrEMBL:Q0WG48,Genbank:YP_002346740.1,GeneID:1174577;gbkey=CDS;product=hypothetical protein;protein_id=YP_002346740.1;transl_table=11
NC_003143.1	RefSeq	gene	1985161	1985460	.	+	.	ID=gene1688;Name=YPO1741;Dbxref=GeneID:1174578;gbkey=Gene;locus_tag=YPO1741
NC_003143.1	RefSeq	CDS	1985161	1985460	.	+	0	ID=cds1615;Name=YP_002346741.1;Parent=gene1688;Dbxref=UniProtKB%2FTrEMBL:Q7CHU6,Genbank:YP_002346741.1,GeneID:1174578;gbkey=CDS;product=hypothetical protein;protein_id=YP_002346741.1;transl_table=11
NC_003143.1	RefSeq	gene	1985569	1985814	.	+	.	ID=gene1689;Name=YPO1742;Dbxref=GeneID:1174579;gbkey=Gene;locus_tag=YPO1742
NC_003143.1	RefSeq	CDS	1985569	1985814	.	+	0	ID=cds1616;Name=YP_002346742.2;Parent=gene1689;Dbxref=UniProtKB%2FTrEMBL:Q7CHU7,Genbank:YP_002346742.2,GeneID:1174579;gbkey=CDS;product=hypothetical protein;protein_id=YP_002346742.2;transl_table=11
NC_003143.1	RefSeq	gene	1986051	1987424	.	+	.	ID=gene1690;Name=aroP;Dbxref=GeneID:1174580;gbkey=Gene;gene=aroP;locus_tag=YPO1743
NC_003143.1	RefSeq	CDS	1986051	1987424	.	+	0	ID=cds1617;Name=YP_002346743.1;Parent=gene1690;Dbxref=InterPro:IPR000585,InterPro:IPR002293,InterPro:IPR004840,InterPro:IPR004841,UniProtKB%2FTrEMBL:Q0WG45,Genbank:YP_002346743.1,GeneID:1174580;gbkey=CDS;gene=aroP;product=aromatic amino acid transport protein;protein_id=YP_002346743.1;transl_table=11
NC_003143.1	RefSeq	region	1986177	1986269	.	+	.	ID=id1206;Note=PS00218 Amino acid permeases signature.;Dbxref=GeneID:1174580;gbkey=misc_feature;gene=aroP
NC_003143.1	RefSeq	gene	1987729	1988328	.	-	.	ID=gene1691;Name=pagP;Dbxref=GeneID:1174581;gbkey=Gene;gene=pagP;locus_tag=YPO1744
NC_003143.1	RefSeq	CDS	1987729	1988328	.	-	0	ID=cds1618;Name=YP_002346744.1;Parent=gene1691;Note=catalyzes the transfer of palmitate to lipid A;Dbxref=InterPro:IPR009746,UniProtKB%2FTrEMBL:Q0WG44,Genbank:YP_002346744.1,GeneID:1174581;gbkey=CDS;gene=pagP;product=palmitoyl transferase;protein_id=YP_002346744.1;transl_table=11
NC_003143.1	RefSeq	gene	1989313	1989741	.	+	.	ID=gene1692;Name=YPO1745a;Dbxref=GeneID:16744758;gbkey=Gene;locus_tag=YPO1745a
NC_003143.1	RefSeq	ncRNA	1989313	1989741	.	+	.	ID=rna34;Parent=gene1692;Dbxref=GeneID:16744758;gbkey=ncRNA;ncrna_class=other;product=ncRNA-cspA thermoregulator
NC_003143.1	RefSeq	exon	1989313	1989741	.	+	.	ID=id1207;Parent=rna34;Dbxref=GeneID:16744758;gbkey=ncRNA;ncrna_class=other;product=ncRNA-cspA thermoregulator
NC_003143.1	RefSeq	gene	1989330	1989446	.	+	.	ID=gene1693;Name=YPO1745;Dbxref=GeneID:1174582;gbkey=Gene;locus_tag=YPO1745
NC_003143.1	RefSeq	CDS	1989330	1989446	.	+	0	ID=cds1619;Name=YP_002346745.1;Parent=gene1693;Dbxref=UniProtKB%2FTrEMBL:Q0WG43,Genbank:YP_002346745.1,GeneID:1174582;gbkey=CDS;product=hypothetical protein;protein_id=YP_002346745.1;transl_table=11
NC_003143.1	RefSeq	gene	1989489	1989698	.	+	.	ID=gene1694;Name=cspC;Dbxref=GeneID:1174583;gbkey=Gene;gene=cspC;gene_synonym=msmB;locus_tag=YPO1746
NC_003143.1	RefSeq	CDS	1989489	1989698	.	+	0	ID=cds1620;Name=YP_002346746.1;Parent=gene1694;Dbxref=InterPro:IPR002059,InterPro:IPR008994,InterPro:IPR011129,InterPro:IPR012156,InterPro:IPR012340,UniProtKB%2FTrEMBL:Q74V47,Genbank:YP_002346746.1,GeneID:1174583;gbkey=CDS;gene=cspC;product=cold shock-like protein CspC;protein_id=YP_002346746.1;transl_table=11
NC_003143.1	RefSeq	region	1989537	1989596	.	+	.	ID=id1208;Note=PS00352 %27Cold-shock%27 DNA-binding domain signature.;Dbxref=GeneID:1174583;gbkey=misc_feature;gene=cspC
NC_003143.1	RefSeq	gene	1989789	1990544	.	-	.	ID=gene1695;Name=YPO1747;Dbxref=GeneID:1174584;gbkey=Gene;locus_tag=YPO1747
NC_003143.1	RefSeq	CDS	1989789	1990544	.	-	0	ID=cds1621;Name=YP_002346747.1;Parent=gene1695;Dbxref=InterPro:IPR003730,UniProtKB%2FTrEMBL:Q0WG41,Genbank:YP_002346747.1,GeneID:1174584;gbkey=CDS;product=hypothetical protein;protein_id=YP_002346747.1;transl_table=11
NC_003143.1	RefSeq	gene	1990939	1991778	.	+	.	ID=gene1696;Name=rrmA;Dbxref=GeneID:1174585;gbkey=Gene;gene=rrmA;locus_tag=YPO1748
NC_003143.1	RefSeq	CDS	1990939	1991778	.	+	0	ID=cds1622;Name=YP_002346748.1;Parent=gene1696;Note=methylates the guanosine in position 745 of 23S rRNA%3B required for translation and cell growth;Dbxref=InterPro:IPR013216,UniProtKB%2FTrEMBL:Q7CHU8,Genbank:YP_002346748.1,GeneID:1174585;gbkey=CDS;gene=rrmA;product=23S rRNA methyltransferase;protein_id=YP_002346748.1;transl_table=11
NC_003143.1	RefSeq	gene	1992000	1992278	.	-	.	ID=gene1697;Name=YPO1749;Dbxref=GeneID:1174586;gbkey=Gene;locus_tag=YPO1749
NC_003143.1	RefSeq	CDS	1992000	1992278	.	-	0	ID=cds1623;Name=YP_002346749.1;Parent=gene1697;Dbxref=UniProtKB%2FTrEMBL:Q7CHU9,Genbank:YP_002346749.1,GeneID:1174586;gbkey=CDS;product=hypothetical protein;protein_id=YP_002346749.1;transl_table=11
NC_003143.1	RefSeq	region	1994513	1996540	.	-	.	ID=id1209;Note=This CDS is disrupted by the insertion of IS100 element. Similar to the internal region of Pseudomonas aeruginosa hypothetical protein PA1181 TR:Q9I4F7 %28EMBL:AE004548%29 %281120 aa%29 fasta scores: E%28%29: 4.7e-53%2C32.423%25 id in 586 aa;Dbxref=PSEUDO:CAL20392.1;gbkey=misc_feature;part=1%2F2;pseudo=true
NC_003143.1	RefSeq	region	1992500	1992553	.	-	.	ID=id1209;Note=This CDS is disrupted by the insertion of IS100 element. Similar to the internal region of Pseudomonas aeruginosa hypothetical protein PA1181 TR:Q9I4F7 %28EMBL:AE004548%29 %281120 aa%29 fasta scores: E%28%29: 4.7e-53%2C32.423%25 id in 586 aa;Dbxref=PSEUDO:CAL20392.1;gbkey=misc_feature;part=2%2F2;pseudo=true
NC_003143.1	RefSeq	repeat_region	1992560	1994513	.	+	.	ID=id1210;Note=insertion sequence:IS100;gbkey=repeat_region
NC_003143.1	RefSeq	repeat_region	1992560	1992587	.	+	.	ID=id1211;Note=IS100 inverted repeat;gbkey=repeat_region
NC_003143.1	RefSeq	gene	1992646	1993668	.	+	.	ID=gene1698;Name=y1093;Dbxref=GeneID:1174588;gbkey=Gene;gene=y1093;gene_synonym=ypmt1;locus_tag=YPO1750
NC_003143.1	RefSeq	CDS	1992646	1993668	.	+	0	ID=cds1624;Name=YP_002346750.1;Parent=gene1698;Dbxref=InterPro:IPR001584,InterPro:IPR006120,InterPro:IPR009057,InterPro:IPR012287,InterPro:IPR012337,UniProtKB%2FTrEMBL:Q7ARN5,Genbank:YP_002346750.1,GeneID:1174588;gbkey=CDS;gene=y1093;product=transposase for insertion sequence IS100;protein_id=YP_002346750.1;transl_table=11
NC_003143.1	RefSeq	region	1992697	1992762	.	+	.	ID=id1212;Note=Predicted helix-turn-helix motif with score 2147 %28%2B6.50 SD%29 at aa 18-39%2C sequence MSSRAIARELGISRNTVKRYLQ;Dbxref=GeneID:1174588;gbkey=misc_feature;gene=y1093
NC_003143.1	RefSeq	gene	1993665	1994447	.	+	.	ID=gene1699;Name=YPO1751;Note=ypmt1.57c;Dbxref=GeneID:1174589;gbkey=Gene;locus_tag=YPO1751
NC_003143.1	RefSeq	CDS	1993665	1994447	.	+	0	ID=cds1625;Name=YP_002346751.1;Parent=gene1699;Dbxref=InterPro:IPR001270,InterPro:IPR002611,InterPro:IPR003593,UniProtKB%2FTrEMBL:Q7ARK4,Genbank:YP_002346751.1,GeneID:1174589;gbkey=CDS;product=transposase%2FIS protein;protein_id=YP_002346751.1;transl_table=11
NC_003143.1	RefSeq	region	1993992	1994015	.	+	.	ID=id1213;Note=PS00017 ATP%2FGTP-binding site motif A %28P-loop%29.;Dbxref=GeneID:1174589;gbkey=misc_feature
NC_003143.1	RefSeq	repeat_region	1994486	1994513	.	-	.	ID=id1214;Note=IS100 inverted repeat;gbkey=repeat_region
NC_003143.1	RefSeq	gene	1994498	1996540	.	-	.	ID=gene1700;Name=YPO1751a;Dbxref=GeneID:16744759;gbkey=Gene;locus_tag=YPO1751a
NC_003143.1	RefSeq	CDS	1994498	1996540	.	-	0	ID=cds1626;Name=YP_008479707.1;Parent=gene1700;Dbxref=Genbank:YP_008479707.1,GeneID:16744759;gbkey=CDS;product=PAS%2FPAC domain-containing protein;protein_id=YP_008479707.1;transl_table=11
NC_003143.1	RefSeq	gene	1996899	1999175	.	+	.	ID=gene1701;Name=fcuA;Dbxref=GeneID:1174590;gbkey=Gene;gene=fcuA;locus_tag=YPO1753
NC_003143.1	RefSeq	CDS	1996899	1999175	.	+	0	ID=cds1627;Name=YP_002346752.1;Parent=gene1701;Dbxref=InterPro:IPR000531,InterPro:IPR010105,InterPro:IPR010916,InterPro:IPR010917,InterPro:IPR012910,UniProtKB%2FTrEMBL:Q0WG36,Genbank:YP_002346752.1,GeneID:1174590;gbkey=CDS;gene=fcuA;product=ferrichrome receptor protein;protein_id=YP_002346752.1;transl_table=11
NC_003143.1	RefSeq	region	1999119	1999172	.	+	.	ID=id1215;Note=PS01156 TonB-dependent receptor proteins signature 2.;Dbxref=GeneID:1174590;gbkey=misc_feature;gene=fcuA
NC_003143.1	RefSeq	gene	1999336	1999905	.	-	.	ID=gene1702;Name=yebN;Dbxref=GeneID:1174591;gbkey=Gene;gene=yebN;locus_tag=YPO1754
NC_003143.1	RefSeq	CDS	1999336	1999905	.	-	0	ID=cds1628;Name=YP_002346753.1;Parent=gene1702;Dbxref=InterPro:IPR003810,UniProtKB%2FTrEMBL:Q0WG35,Genbank:YP_002346753.1,GeneID:1174591;gbkey=CDS;gene=yebN;product=hypothetical protein;protein_id=YP_002346753.1;transl_table=11
NC_003143.1	RefSeq	gene	2000334	2000795	.	-	.	ID=gene1703;Name=yobD;Dbxref=GeneID:1174592;gbkey=Gene;gene=yobD;locus_tag=YPO1755
NC_003143.1	RefSeq	CDS	2000334	2000795	.	-	0	ID=cds1629;Name=YP_002346754.1;Parent=gene1703;Dbxref=InterPro:IPR009328,UniProtKB%2FTrEMBL:Q0WG34,Genbank:YP_002346754.1,GeneID:1174592;gbkey=CDS;gene=yobD;product=hypothetical protein;protein_id=YP_002346754.1;transl_table=11
NC_003143.1	RefSeq	gene	2000995	2001882	.	-	.	ID=gene1704;Name=manZ;Dbxref=GeneID:1174593;gbkey=Gene;gene=manZ;gene_synonym=ptsM;locus_tag=YPO1756
NC_003143.1	RefSeq	CDS	2000995	2001882	.	-	0	ID=cds1630;Name=YP_002346755.1;Parent=gene1704;Note=hosphoenolpyruvate-dependent sugar phosphotransferase system catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane%3B IID with IIC forms the translocation channel;Dbxref=InterPro:IPR004704,UniProtKB%2FTrEMBL:Q7CHV1,Genbank:YP_002346755.1,GeneID:1174593;gbkey=CDS;gene=manZ;product=PTS system mannose-specific transporter subunit IID;protein_id=YP_002346755.1;transl_table=11
NC_003143.1	RefSeq	gene	2001889	2002686	.	-	.	ID=gene1705;Name=manY;Dbxref=GeneID:1174594;gbkey=Gene;gene=manY;gene_synonym=pel,ptsP;locus_tag=YPO1757
NC_003143.1	RefSeq	CDS	2001889	2002686	.	-	0	ID=cds1631;Name=YP_002346756.1;Parent=gene1705;Dbxref=InterPro:IPR004700,UniProtKB%2FTrEMBL:Q0WG32,Genbank:YP_002346756.1,GeneID:1174594;gbkey=CDS;gene=manY;product=PTS system mannose-specific transporter subunit C;protein_id=YP_002346756.1;transl_table=11
NC_003143.1	RefSeq	region	2002639	2002671	.	-	.	ID=id1216;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site.;Dbxref=GeneID:1174594;gbkey=misc_feature;gene=manY
NC_003143.1	RefSeq	gene	2002778	2003752	.	-	.	ID=gene1706;Name=gptB;Dbxref=GeneID:1174595;gbkey=Gene;gene=gptB;gene_synonym=manX,ptsL;locus_tag=YPO1758
NC_003143.1	RefSeq	CDS	2002778	2003752	.	-	0	ID=cds1632;Name=YP_002346757.1;Parent=gene1706;Dbxref=InterPro:IPR004701,InterPro:IPR004720,InterPro:IPR013789,UniProtKB%2FTrEMBL:Q7CHV2,Genbank:YP_002346757.1,GeneID:1174595;gbkey=CDS;gene=gptB;product=PTS system mannose-specific transporter subunit IIAB;protein_id=YP_002346757.1;transl_table=11
NC_003143.1	RefSeq	gene	2004462	2005917	.	+	.	ID=gene1707;Name=yoaE;Dbxref=GeneID:1174596;gbkey=Gene;gene=yoaE;locus_tag=YPO1759;pseudo=true
NC_003143.1	RefSeq	gene	2006019	2006486	.	-	.	ID=gene1708;Name=hpaR;Dbxref=GeneID:1174597;gbkey=Gene;gene=hpaR;gene_synonym=hpcR;locus_tag=YPO1760
NC_003143.1	RefSeq	CDS	2006019	2006486	.	-	0	ID=cds1633;Name=YP_002346759.1;Parent=gene1708;Dbxref=InterPro:IPR000835,InterPro:IPR011991,InterPro:IPR012712,UniProtKB%2FTrEMBL:Q0WG29,Genbank:YP_002346759.1,GeneID:1174597;gbkey=CDS;gene=hpaR;product=homoprotocatechuate degradative operon repressor;protein_id=YP_002346759.1;transl_table=11
NC_003143.1	RefSeq	gene	2006870	2007502	.	+	.	ID=gene1709;Name=YPO1761;Dbxref=GeneID:1174598;gbkey=Gene;locus_tag=YPO1761
NC_003143.1	RefSeq	CDS	2006870	2007502	.	+	0	ID=cds1634;Name=YP_008479708.1;Parent=gene1709;Dbxref=Genbank:YP_008479708.1,GeneID:1174598;gbkey=CDS;product=fumarylacetoacetate hydrolase family;protein_id=YP_008479708.1;transl_table=11
NC_003143.1	RefSeq	gene	2007499	2008263	.	+	.	ID=gene1710;Name=YPO1761a;Dbxref=GeneID:16744760;gbkey=Gene;locus_tag=YPO1761a
NC_003143.1	RefSeq	CDS	2007499	2008263	.	+	0	ID=cds1635;Name=YP_008479709.1;Parent=gene1710;Dbxref=Genbank:YP_008479709.1,GeneID:16744760;gbkey=CDS;product=fumarylacetoacetate hydrolase family protein;protein_id=YP_008479709.1;transl_table=11
NC_003143.1	RefSeq	gene	2008260	2009657	.	+	.	ID=gene1711;Name=hpaE;Dbxref=GeneID:1174599;gbkey=Gene;gene=hpaE;locus_tag=YPO1763
NC_003143.1	RefSeq	CDS	2008260	2009657	.	+	0	ID=cds1636;Name=YP_002346760.1;Parent=gene1711;Dbxref=InterPro:IPR002086,InterPro:IPR011985,InterPro:IPR012303,UniProtKB%2FTrEMBL:Q7CHV4,Genbank:YP_002346760.1,GeneID:1174599;gbkey=CDS;gene=hpaE;product=5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase;protein_id=YP_002346760.1;transl_table=11
NC_003143.1	RefSeq	region	2008986	2009009	.	+	.	ID=id1217;Note=PS00687 Aldehyde dehydrogenases glutamic acid active site.;Dbxref=GeneID:1174599;gbkey=misc_feature;gene=hpaE
NC_003143.1	RefSeq	region	2009070	2009105	.	+	.	ID=id1218;Note=PS00070 Aldehyde dehydrogenases cysteine active site.;Dbxref=GeneID:1174599;gbkey=misc_feature;gene=hpaE
NC_003143.1	RefSeq	gene	2009776	2010633	.	+	.	ID=gene1712;Name=hpaD;Dbxref=GeneID:1174600;gbkey=Gene;gene=hpaD;locus_tag=YPO1764
NC_003143.1	RefSeq	CDS	2009776	2010633	.	+	0	ID=cds1637;Name=YP_002346761.1;Parent=gene1712;Dbxref=InterPro:IPR004183,InterPro:IPR011984,UniProtKB%2FTrEMBL:Q7CHV5,Genbank:YP_002346761.1,GeneID:1174600;gbkey=CDS;gene=hpaD;product=3%2C4-dihydroxyphenylacetate 2%2C3-dioxygenase;protein_id=YP_002346761.1;transl_table=11
NC_003143.1	RefSeq	gene	2010658	2011056	.	+	.	ID=gene1713;Name=hpaF;Dbxref=GeneID:1174601;gbkey=Gene;gene=hpaF;locus_tag=YPO1765
NC_003143.1	RefSeq	CDS	2010658	2011056	.	+	0	ID=cds1638;Name=YP_002346762.1;Parent=gene1713;Dbxref=InterPro:IPR004220,UniProtKB%2FTrEMBL:Q7CHV6,Genbank:YP_002346762.1,GeneID:1174601;gbkey=CDS;gene=hpaF;product=5-carboxymethyl-2-hydroxymuconate delta-isomerase;protein_id=YP_002346762.1;transl_table=11
NC_003143.1	RefSeq	region	2011021	2011053	.	+	.	ID=id1219;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site.;Dbxref=GeneID:1174601;gbkey=misc_feature;gene=hpaF
NC_003143.1	RefSeq	gene	2011050	2011853	.	+	.	ID=gene1714;Name=hpaH;Dbxref=GeneID:1174602;gbkey=Gene;gene=hpaH;gene_synonym=hpcG;locus_tag=YPO1766
NC_003143.1	RefSeq	CDS	2011050	2011853	.	+	0	ID=cds1639;Name=YP_002346763.1;Parent=gene1714;Dbxref=InterPro:IPR002607,InterPro:IPR012690,UniProtKB%2FTrEMBL:Q7CHV7,Genbank:YP_002346763.1,GeneID:1174602;gbkey=CDS;gene=hpaH;product=2-oxo-hept-3-ene-1%2C7-dioate hydratase;protein_id=YP_002346763.1;transl_table=11
NC_003143.1	RefSeq	gene	2011864	2012670	.	+	.	ID=gene1715;Name=hpaI;Dbxref=GeneID:1174603;gbkey=Gene;gene=hpaI;gene_synonym=hpcH;locus_tag=YPO1767
NC_003143.1	RefSeq	CDS	2011864	2012670	.	+	0	ID=cds1640;Name=YP_002346764.1;Parent=gene1715;Dbxref=InterPro:IPR005000,InterPro:IPR012689,UniProtKB%2FTrEMBL:Q0WG24,Genbank:YP_002346764.1,GeneID:1174603;gbkey=CDS;gene=hpaI;product=2%2C4-dihydroxyhept-2-ene-1%2C7-dioic acid aldolase;protein_id=YP_002346764.1;transl_table=11
NC_003143.1	RefSeq	gene	2012696	2014063	.	+	.	ID=gene1716;Name=hpaX;Dbxref=GeneID:1174604;gbkey=Gene;gene=hpaX;locus_tag=YPO1768
NC_003143.1	RefSeq	CDS	2012696	2014063	.	+	0	ID=cds1641;Name=YP_002346765.1;Parent=gene1716;Dbxref=InterPro:IPR007114,InterPro:IPR011701,InterPro:IPR012707,UniProtKB%2FTrEMBL:Q7CHV8,Genbank:YP_002346765.1,GeneID:1174604;gbkey=CDS;gene=hpaX;product=4-hydroxyphenylacetate permease;protein_id=YP_002346765.1;transl_table=11
NC_003143.1	RefSeq	gene	2014131	2015693	.	+	.	ID=gene1717;Name=hpaB;Dbxref=GeneID:1174605;gbkey=Gene;gene=hpaB;locus_tag=YPO1769
NC_003143.1	RefSeq	CDS	2014131	2015693	.	+	0	ID=cds1642;Name=YP_002346766.1;Parent=gene1717;Dbxref=InterPro:IPR004925,InterPro:IPR009100,InterPro:IPR012688,UniProtKB%2FTrEMBL:Q7CHV9,Genbank:YP_002346766.1,GeneID:1174605;gbkey=CDS;gene=hpaB;product=4-hydroxyphenylacetate 3-monooxygenase;protein_id=YP_002346766.1;transl_table=11
NC_003143.1	RefSeq	gene	2015714	2016211	.	+	.	ID=gene1718;Name=hpaC;Dbxref=GeneID:1174606;gbkey=Gene;gene=hpaC;locus_tag=YPO1770
NC_003143.1	RefSeq	CDS	2015714	2016211	.	+	0	ID=cds1643;Name=YP_002346767.1;Parent=gene1718;Dbxref=InterPro:IPR002563,InterPro:IPR009002,InterPro:IPR011982,UniProtKB%2FTrEMBL:Q7CHW0,Genbank:YP_002346767.1,GeneID:1174606;gbkey=CDS;gene=hpaC;product=4-hydroxyphenylacetate 3-monooxygenase coupling protein;protein_id=YP_002346767.1;transl_table=11
NC_003143.1	RefSeq	gene	2016491	2017855	.	-	.	ID=gene1719;Name=sdaA;Dbxref=GeneID:1174607;gbkey=Gene;gene=sdaA;locus_tag=YPO1771
NC_003143.1	RefSeq	CDS	2016491	2017855	.	-	0	ID=cds1644;Name=YP_002346768.1;Parent=gene1719;Dbxref=InterPro:IPR004644,InterPro:IPR005130,InterPro:IPR005131,UniProtKB%2FTrEMBL:Q7CHW1,Genbank:YP_002346768.1,GeneID:1174607;gbkey=CDS;gene=sdaA;product=L-serine dehydratase;protein_id=YP_002346768.1;transl_table=11
NC_003143.1	RefSeq	gene	2018563	2019162	.	-	.	ID=gene1720;Name=YPO1772;Dbxref=GeneID:1174608;gbkey=Gene;locus_tag=YPO1772
NC_003143.1	RefSeq	CDS	2018563	2019162	.	-	0	ID=cds1645;Name=YP_002346769.1;Parent=gene1720;Dbxref=InterPro:IPR000059,InterPro:IPR000086,UniProtKB%2FTrEMBL:Q7CHW2,Genbank:YP_002346769.1,GeneID:1174608;gbkey=CDS;product=hypothetical protein;protein_id=YP_002346769.1;transl_table=11
NC_003143.1	RefSeq	region	2018935	2018997	.	-	.	ID=id1220;Note=PS01293 Uncharacterized protein family UPF0035 signature.;Dbxref=GeneID:1174608;gbkey=misc_feature
NC_003143.1	RefSeq	gene	2019159	2020535	.	-	.	ID=gene1721;Name=pabB;Dbxref=GeneID:1174609;gbkey=Gene;gene=pabB;locus_tag=YPO1773
NC_003143.1	RefSeq	CDS	2019159	2020535	.	-	0	ID=cds1646;Name=YP_002346770.1;Parent=gene1721;Dbxref=InterPro:IPR005801,InterPro:IPR005802,InterPro:IPR006805,UniProtKB%2FTrEMBL:Q7CHW3,Genbank:YP_002346770.1,GeneID:1174609;gbkey=CDS;gene=pabB;product=para-aminobenzoate synthase component I;protein_id=YP_002346770.1;transl_table=11
NC_003143.1	RefSeq	region	2019162	2019173	.	-	.	ID=id1221;Note=PS00294 Prenyl group binding site %28CAAX box%29.;Dbxref=GeneID:1174609;gbkey=misc_feature;gene=pabB
NC_003143.1	RefSeq	gene	2020700	2020957	.	+	.	ID=gene1722;Name=YPO1774;Dbxref=GeneID:1174610;gbkey=Gene;locus_tag=YPO1774
NC_003143.1	RefSeq	CDS	2020700	2020957	.	+	0	ID=cds1647;Name=YP_002346771.1;Parent=gene1722;Dbxref=InterPro:IPR005371,UniProtKB%2FTrEMBL:Q0WG17,Genbank:YP_002346771.1,GeneID:1174610;gbkey=CDS;product=hypothetical protein;protein_id=YP_002346771.1;transl_table=11
NC_003143.1	RefSeq	gene	2021083	2022264	.	-	.	ID=gene1723;Name=purT;Dbxref=GeneID:1174611;gbkey=Gene;gene=purT;locus_tag=YPO1775
NC_003143.1	RefSeq	CDS	2021083	2022264	.	-	0	ID=cds1648;Name=YP_002346772.1;Parent=gene1723;Note=non-folate utilizing enzyme%2C catalyzes the production of beta-formyl glycinamide ribonucleotide from formate%2C ATP%2C and beta-GAR and a side reaction producing acetyl phosphate and ADP from acetate and ATP%3B involved in de novo purine biosynthesis;Dbxref=InterPro:IPR003135,InterPro:IPR005862,InterPro:IPR011761,InterPro:IPR013816,InterPro:IPR013817,UniProtKB%2FTrEMBL:Q7CHW4,Genbank:YP_002346772.1,GeneID:1174611;gbkey=CDS;gene=purT;product=phosphoribosylglycinamide formyltransferase 2;protein_id=YP_002346772.1;transl_table=11
NC_003143.1	RefSeq	gene	2022577	2023959	.	+	.	ID=gene1724;Name=dbpA;Dbxref=GeneID:1174612;gbkey=Gene;gene=dbpA;locus_tag=YPO1776
NC_003143.1	RefSeq	CDS	2022577	2023959	.	+	0	ID=cds1649;Name=YP_002346773.1;Parent=gene1724;Note=exhibits an RNA-dependent ATPase activity%2C specifically stimulated by bacterial 23S rRNA;Dbxref=InterPro:IPR000629,InterPro:IPR001650,InterPro:IPR005580,InterPro:IPR011545,InterPro:IPR014001,InterPro:IPR014014,InterPro:IPR014021,UniProtKB%2FTrEMBL:Q7CHW5,Genbank:YP_002346773.1,GeneID:1174612;gbkey=CDS;gene=dbpA;product=ATP-dependent RNA helicase DbpA;protein_id=YP_002346773.1;transl_table=11
NC_003143.1	RefSeq	region	2022718	2022741	.	+	.	ID=id1222;Note=PS00017 ATP%2FGTP-binding site motif A %28P-loop%29.;Dbxref=GeneID:1174612;gbkey=misc_feature;gene=dbpA
NC_003143.1	RefSeq	region	2023030	2023056	.	+	.	ID=id1223;Note=PS00039 DEAD-box subfamily ATP-dependent helicases signature.;Dbxref=GeneID:1174612;gbkey=misc_feature;gene=dbpA
NC_003143.1	RefSeq	gene	2024053	2024373	.	+	.	ID=gene1725;Name=YPO1777;Dbxref=GeneID:1174613;gbkey=Gene;locus_tag=YPO1777
NC_003143.1	RefSeq	CDS	2024053	2024373	.	+	0	ID=cds1650;Name=YP_002346774.1;Parent=gene1725;Dbxref=InterPro:IPR009813,UniProtKB%2FTrEMBL:Q7CHW6,Genbank:YP_002346774.1,GeneID:1174613;gbkey=CDS;product=hypothetical protein;protein_id=YP_002346774.1;transl_table=11
NC_003143.1	RefSeq	gene	2024413	2024721	.	+	.	ID=gene1726;Name=YPO1778;Dbxref=GeneID:1174614;gbkey=Gene;locus_tag=YPO1778
NC_003143.1	RefSeq	CDS	2024413	2024721	.	+	0	ID=cds1651;Name=YP_002346775.1;Parent=gene1726;Dbxref=InterPro:IPR008314,UniProtKB%2FTrEMBL:Q0WG13,Genbank:YP_002346775.1,GeneID:1174614;gbkey=CDS;product=hypothetical protein;protein_id=YP_002346775.1;transl_table=11
NC_003143.1	RefSeq	gene	2024813	2025238	.	+	.	ID=gene1727;Name=YPO1779;Dbxref=GeneID:1174615;gbkey=Gene;locus_tag=YPO1779
NC_003143.1	RefSeq	CDS	2024813	2025238	.	+	0	ID=cds1652;Name=YP_002346776.1;Parent=gene1727;Note=secreted protein%3B unknown function;Dbxref=UniProtKB%2FTrEMBL:Q0WG12,Genbank:YP_002346776.1,GeneID:1174615;gbkey=CDS;product=hypothetical protein;protein_id=YP_002346776.1;transl_table=11
NC_003143.1	RefSeq	gene	2025548	2027599	.	+	.	ID=gene1728;Name=ptrB;Dbxref=GeneID:1174616;gbkey=Gene;gene=ptrB;gene_synonym=rlp;locus_tag=YPO1780
NC_003143.1	RefSeq	CDS	2025548	2027599	.	+	0	ID=cds1653;Name=YP_002346777.1;Parent=gene1728;Dbxref=InterPro:IPR001005,InterPro:IPR001375,InterPro:IPR002470,InterPro:IPR004106,UniProtKB%2FTrEMBL:Q74UT4,Genbank:YP_002346777.1,GeneID:1174616;gbkey=CDS;gene=ptrB;product=oligopeptidase B;protein_id=YP_002346777.1;transl_table=11
NC_003143.1	RefSeq	region	2026601	2026627	.	+	.	ID=id1224;Note=PS00037 Myb DNA-binding domain repeat signature 1.;Dbxref=GeneID:1174616;gbkey=misc_feature;gene=ptrB
NC_003143.1	RefSeq	gene	2028321	2029271	.	+	.	ID=gene1729;Name=pip;Dbxref=GeneID:1174617;gbkey=Gene;gene=pip;locus_tag=YPO1781
NC_003143.1	RefSeq	CDS	2028321	2029271	.	+	0	ID=cds1654;Name=YP_002346778.1;Parent=gene1729;Dbxref=InterPro:IPR000073,InterPro:IPR002410,InterPro:IPR003089,InterPro:IPR005944,UniProtKB%2FTrEMBL:Q7CHW8,Genbank:YP_002346778.1,GeneID:1174617;gbkey=CDS;gene=pip;product=proline iminopeptidase;protein_id=YP_002346778.1;transl_table=11
NC_003143.1	RefSeq	gene	2029331	2029561	.	-	.	ID=gene1730;Name=holE;Dbxref=GeneID:1174618;gbkey=Gene;gene=holE;locus_tag=YPO1782
NC_003143.1	RefSeq	CDS	2029331	2029561	.	-	0	ID=cds1655;Name=YP_002346779.1;Parent=gene1730;Dbxref=InterPro:IPR009052,UniProtKB%2FTrEMBL:Q74UT6,Genbank:YP_002346779.1,GeneID:1174618;gbkey=CDS;gene=holE;product=DNA polymerase III subunit theta;protein_id=YP_002346779.1;transl_table=11
NC_003143.1	RefSeq	gene	2029962	2030471	.	+	.	ID=gene1731;Name=ftn;Dbxref=GeneID:1174619;gbkey=Gene;gene=ftn;gene_synonym=ftnA,gen-165,rsgA;locus_tag=YPO1783
NC_003143.1	RefSeq	CDS	2029962	2030471	.	+	0	ID=cds1656;Name=YP_002346780.1;Parent=gene1731;Dbxref=InterPro:IPR001519,InterPro:IPR008331,InterPro:IPR009040,InterPro:IPR009078,InterPro:IPR012347,UniProtKB%2FTrEMBL:Q0WG08,Genbank:YP_002346780.1,GeneID:1174619;gbkey=CDS;gene=ftn;product=ferritin;protein_id=YP_002346780.1;transl_table=11
NC_003143.1	RefSeq	gene	2030868	2031254	.	+	.	ID=gene1732;Name=YPO1784;Dbxref=GeneID:1174620;gbkey=Gene;locus_tag=YPO1784
NC_003143.1	RefSeq	CDS	2030868	2031254	.	+	0	ID=cds1657;Name=YP_002346781.1;Parent=gene1732;Dbxref=InterPro:IPR007348,UniProtKB%2FTrEMBL:Q0WG07,Genbank:YP_002346781.1,GeneID:1174620;gbkey=CDS;product=copper resistance protein;protein_id=YP_002346781.1;transl_table=11
NC_003143.1	RefSeq	gene	2031257	2032141	.	+	.	ID=gene1733;Name=YPO1785;Dbxref=GeneID:1174621;gbkey=Gene;locus_tag=YPO1785
NC_003143.1	RefSeq	CDS	2031257	2032141	.	+	0	ID=cds1658;Name=YP_002346782.1;Parent=gene1733;Dbxref=InterPro:IPR008457,InterPro:IPR012172,UniProtKB%2FTrEMBL:Q7CHW9,Genbank:YP_002346782.1,GeneID:1174621;gbkey=CDS;product=copper resistance protein D;protein_id=YP_002346782.1;transl_table=11
NC_003143.1	RefSeq	gene	2032223	2032579	.	+	.	ID=gene1734;Name=yebY;Dbxref=GeneID:1174622;gbkey=Gene;gene=yebY;locus_tag=YPO1786
NC_003143.1	RefSeq	CDS	2032223	2032579	.	+	0	ID=cds1659;Name=YP_002346783.1;Parent=gene1734;Dbxref=UniProtKB%2FTrEMBL:Q7CHX0,Genbank:YP_002346783.1,GeneID:1174622;gbkey=CDS;gene=yebY;product=hypothetical protein;protein_id=YP_002346783.1;transl_table=11
NC_003143.1	RefSeq	gene	2033102	2033428	.	-	.	ID=gene1735;Name=YPO1788;Dbxref=GeneID:1174624;gbkey=Gene;locus_tag=YPO1788
NC_003143.1	RefSeq	CDS	2033102	2033428	.	-	0	ID=cds1660;Name=YP_002346785.1;Parent=gene1735;Dbxref=InterPro:IPR009081,InterPro:IPR010862,UniProtKB%2FTrEMBL:Q74UU3,Genbank:YP_002346785.1,GeneID:1174624;gbkey=CDS;product=acyl carrier protein;protein_id=YP_002346785.1;transl_table=11
NC_003143.1	RefSeq	gene	2033422	2033880	.	-	.	ID=gene1736;Name=YPO1789;Dbxref=GeneID:1174625;gbkey=Gene;locus_tag=YPO1789
NC_003143.1	RefSeq	CDS	2033422	2033880	.	-	0	ID=cds1661;Name=YP_002346786.1;Parent=gene1736;Dbxref=UniProtKB%2FTrEMBL:Q7CHX1,Genbank:YP_002346786.1,GeneID:1174625;gbkey=CDS;product=hypothetical protein;protein_id=YP_002346786.1;transl_table=11
NC_003143.1	RefSeq	region	2033476	2033541	.	-	.	ID=id1225;Note=1 probable transmembrane helix predicted;Dbxref=GeneID:1174625;gbkey=misc_feature
NC_003143.1	RefSeq	gene	2034412	2035572	.	+	.	ID=gene1737;Name=flhB;Dbxref=GeneID:1174626;gbkey=Gene;gene=flhB;locus_tag=YPO1790
NC_003143.1	RefSeq	CDS	2034412	2035572	.	+	0	ID=cds1662;Name=YP_002346787.1;Parent=gene1737;Note=membrane protein responsible for substrate specificity switching from rod%2Fhook-type export to filament-type export%3B Yersinia has 2 copies of flhB%3B Bradyrhizobium has one thick flagellum and several thin flagella%3B the Bradyrhizobium protein in this cluster is associated with the thin flagella;Dbxref=InterPro:IPR006135,InterPro:IPR006136,UniProtKB%2FTrEMBL:Q7CHX2,Genbank:YP_002346787.1,GeneID:1174626;gbkey=CDS;gene=flhB;product=flagellar biosynthesis protein FlhB;protein_id=YP_002346787.1;transl_table=11
NC_003143.1	RefSeq	gene	2035572	2037650	.	+	.	ID=gene1738;Name=flhA;Dbxref=GeneID:1174627;gbkey=Gene;gene=flhA;locus_tag=YPO1791
NC_003143.1	RefSeq	CDS	2035572	2037650	.	+	0	ID=cds1663;Name=YP_002346788.1;Parent=gene1738;Note=membrane protein involved in the flagellar export apparatus;Dbxref=InterPro:IPR001712,InterPro:IPR006301,UniProtKB%2FTrEMBL:Q7CHX3,Genbank:YP_002346788.1,GeneID:1174627;gbkey=CDS;gene=flhA;product=flagellar biosynthesis protein FlhA;protein_id=YP_002346788.1;transl_table=11
NC_003143.1	RefSeq	region	2036010	2036081	.	+	.	ID=id1226;Note=PS00994 Bacterial export FHIPEP family signature.;Dbxref=GeneID:1174627;gbkey=misc_feature;gene=flhA
NC_003143.1	RefSeq	gene	2037650	2038072	.	+	.	ID=gene1739;Name=flhE;Dbxref=GeneID:1174628;gbkey=Gene;gene=flhE;locus_tag=YPO1792
NC_003143.1	RefSeq	CDS	2037650	2038072	.	+	0	ID=cds1664;Name=YP_002346789.1;Parent=gene1739;Dbxref=InterPro:IPR009420,UniProtKB%2FTrEMBL:Q7CHX4,Genbank:YP_002346789.1,GeneID:1174628;gbkey=CDS;gene=flhE;product=flagellar protein FlhE;protein_id=YP_002346789.1;transl_table=11
NC_003143.1	RefSeq	gene	2038682	2042350	.	+	.	ID=gene1740;Name=inv;Dbxref=GeneID:1174629;gbkey=Gene;gene=inv;locus_tag=YPO1793;pseudo=true
NC_003143.1	RefSeq	region	2038682	2039587	.	+	.	ID=id1227;Note=This gene is disrupted by the insertion%2C after codon 302%2C of an IS200-like insertion sequence. The full length CDS is similar to Yersinia pestis invasin Inv TR:Q56937 %28EMBL:U22457%29 %28987 aa%29 fasta scores: E%28%29: 0%2C 99.8%25 id in 986 aa%2C and to Yersinia pseudotuberculosis invasin SW:INVA_YERPS %28P11922%29 %28985 aa%29 fasta scores: E%28%29: 0%2C 99.1%25 id in 986 aa;Dbxref=PSEUDO:CAL20434.1,GeneID:1174629;gbkey=misc_feature;gene=inv;part=1%2F2;pseudo=true
NC_003143.1	RefSeq	region	2040296	2042350	.	+	.	ID=id1227;Note=This gene is disrupted by the insertion%2C after codon 302%2C of an IS200-like insertion sequence. The full length CDS is similar to Yersinia pestis invasin Inv TR:Q56937 %28EMBL:U22457%29 %28987 aa%29 fasta scores: E%28%29: 0%2C 99.8%25 id in 986 aa%2C and to Yersinia pseudotuberculosis invasin SW:INVA_YERPS %28P11922%29 %28985 aa%29 fasta scores: E%28%29: 0%2C 99.1%25 id in 986 aa;Dbxref=PSEUDO:CAL20434.1,GeneID:1174629;gbkey=misc_feature;gene=inv;part=2%2F2;pseudo=true
NC_003143.1	RefSeq	region	2038766	2038825	.	+	.	ID=id1228;Note=1 probable transmembrane helix predicted;Dbxref=GeneID:1174629;gbkey=misc_feature;gene=inv
NC_003143.1	RefSeq	repeat_region	2039585	2040296	.	+	.	ID=id1229;Note=Contains a %27A%27 at nucleotide position 315%7EIS200-like insertion sequence:IS1541;Dbxref=GeneID:1174629;gbkey=repeat_region;gene=inv
NC_003143.1	RefSeq	gene	2039730	2040188	.	+	.	ID=gene1741;Name=tnp;Dbxref=GeneID:1174630;gbkey=Gene;gene=tnp;locus_tag=YPO1794
NC_003143.1	RefSeq	CDS	2039730	2040188	.	+	0	ID=cds1665;Name=YP_002346790.1;Parent=gene1741;Dbxref=InterPro:IPR002686,UniProtKB%2FTrEMBL:Q56938,Genbank:YP_002346790.1,GeneID:1174630;gbkey=CDS;gene=tnp;product=transposase for the IS1541 insertion element;protein_id=YP_002346790.1;transl_table=11
NC_003143.1	RefSeq	region	2040926	2040949	.	+	.	ID=id1230;Note=PS00017 ATP%2FGTP-binding site motif A %28P-loop%29.;Dbxref=GeneID:1174629;gbkey=misc_feature;gene=inv
NC_003143.1	RefSeq	gene	2042540	2042980	.	-	.	ID=gene1742;Name=flgN;Dbxref=GeneID:1174631;gbkey=Gene;gene=flgN;locus_tag=YPO1796
NC_003143.1	RefSeq	CDS	2042540	2042980	.	-	0	ID=cds1666;Name=YP_002346791.1;Parent=gene1742;Dbxref=InterPro:IPR007809,UniProtKB%2FTrEMBL:Q0WFZ7,Genbank:YP_002346791.1,GeneID:1174631;gbkey=CDS;gene=flgN;product=flagellar synthesis protein FlgN;protein_id=YP_002346791.1;transl_table=11
NC_003143.1	RefSeq	gene	2042999	2043301	.	-	.	ID=gene1743;Name=flgM;Dbxref=GeneID:1174632;gbkey=Gene;gene=flgM;locus_tag=YPO1797
NC_003143.1	RefSeq	CDS	2042999	2043301	.	-	0	ID=cds1667;Name=YP_002346792.1;Parent=gene1743;Note=regulates the flagellar specific sigma28 transcription factor;Dbxref=InterPro:IPR007412,UniProtKB%2FTrEMBL:Q7CHX5,Genbank:YP_002346792.1,GeneID:1174632;gbkey=CDS;gene=flgM;product=anti-sigma28 factor FlgM;protein_id=YP_002346792.1;transl_table=11
NC_003143.1	RefSeq	gene	2043452	2044150	.	-	.	ID=gene1744;Name=flgA;Dbxref=GeneID:1174633;gbkey=Gene;gene=flgA;locus_tag=YPO1798
NC_003143.1	RefSeq	CDS	2043452	2044150	.	-	0	ID=cds1668;Name=YP_002346793.1;Parent=gene1744;Note=required for the assembly of the flagellar basal body P-ring;Dbxref=InterPro:IPR013974,UniProtKB%2FTrEMBL:Q0WFZ5,Genbank:YP_002346793.1,GeneID:1174633;gbkey=CDS;gene=flgA;product=flagellar basal body P-ring biosynthesis protein FlgA;protein_id=YP_002346793.1;transl_table=11
NC_003143.1	RefSeq	gene	2044389	2044802	.	+	.	ID=gene1745;Name=flgB;Note=fla FII;Dbxref=GeneID:1174634;gbkey=Gene;gene=flgB;gene_synonym=flbA,flgB;locus_tag=YPO1799
NC_003143.1	RefSeq	CDS	2044389	2044802	.	+	0	ID=cds1669;Name=YP_002346794.1;Parent=gene1745;Note=with FlgF and C makes up the proximal portion of the flagellar basal body rod%3B Vibrio parahaemolyticus protein is associated with the polar flagella;Dbxref=InterPro:IPR001444,InterPro:IPR006300,UniProtKB%2FTrEMBL:Q7CHX6,Genbank:YP_002346794.1,GeneID:1174634;gbkey=CDS;gene=flgB;product=flagellar basal-body rod protein FlgB;protein_id=YP_002346794.1;transl_table=11
NC_003143.1	RefSeq	gene	2044808	2045212	.	+	.	ID=gene1746;Name=flgC;Note=fla FIII;Dbxref=GeneID:1174635;gbkey=Gene;gene=flgC;gene_synonym=flaW,flgC;locus_tag=YPO1800
NC_003143.1	RefSeq	CDS	2044808	2045212	.	+	0	ID=cds1670;Name=YP_002346795.1;Parent=gene1746;Note=with FlgF and B makes up the proximal portion of the flagellar basal body rod;Dbxref=InterPro:IPR001444,InterPro:IPR006299,InterPro:IPR010930,UniProtKB%2FTrEMBL:Q7CHX7,Genbank:YP_002346795.1,GeneID:1174635;gbkey=CDS;gene=flgC;product=flagellar basal body rod protein FlgC;protein_id=YP_002346795.1;transl_table=11
NC_003143.1	RefSeq	region	2044844	2044906	.	+	.	ID=id1231;Note=PS00588 Flagella basal body rod proteins signature.;Dbxref=GeneID:1174635;gbkey=misc_feature;gene=flgC
NC_003143.1	RefSeq	gene	2045227	2045904	.	+	.	ID=gene1747;Name=flgD;Dbxref=GeneID:1174636;gbkey=Gene;gene=flgD;locus_tag=YPO1801
NC_003143.1	RefSeq	CDS	2045227	2045904	.	+	0	ID=cds1671;Name=YP_002346796.1;Parent=gene1747;Note=acts as a scaffold for the assembly of hook proteins onto the flagellar basal body rod%3B Yersinia%2C Vibrio parahaemolyticus%2C Bradyrhizobium and other organisms have 2 copies of some flagellar genes%3B in V. parahaemolyticus one set used for lateral flagella production and the other is used for the polar flagella production;Dbxref=InterPro:IPR002086,InterPro:IPR005648,UniProtKB%2FTrEMBL:Q7CHX8,Genbank:YP_002346796.1,GeneID:1174636;gbkey=CDS;gene=flgD;product=flagellar basal body rod modification protein;protein_id=YP_002346796.1;transl_table=11
NC_003143.1	RefSeq	region	2045656	2045679	.	+	.	ID=id1232;Note=PS00687 Aldehyde dehydrogenases glutamic acid active site.;Dbxref=GeneID:1174636;gbkey=misc_feature;gene=flgD
NC_003143.1	RefSeq	gene	2046106	2047392	.	+	.	ID=gene1748;Name=flgE;Dbxref=GeneID:1174637;gbkey=Gene;gene=flgE;locus_tag=YPO1802
NC_003143.1	RefSeq	CDS	2046106	2047392	.	+	0	ID=cds1672;Name=YP_002346797.1;Parent=gene1748;Note=the hook connects flagellar basal body to the flagellar filament;Dbxref=InterPro:IPR001444,InterPro:IPR010930,InterPro:IPR011491,UniProtKB%2FTrEMBL:Q7CHX9,Genbank:YP_002346797.1,GeneID:1174637;gbkey=CDS;gene=flgE;product=flagellar hook protein FlgE;protein_id=YP_002346797.1;transl_table=11
NC_003143.1	RefSeq	region	2046130	2046192	.	+	.	ID=id1233;Note=PS00588 Flagella basal body rod proteins signature.;Dbxref=GeneID:1174637;gbkey=misc_feature;gene=flgE
NC_003143.1	RefSeq	gene	2047414	2048043	.	+	.	ID=gene1749;Name=flgF;Note=fla FVI;Dbxref=GeneID:1174638;gbkey=Gene;gene=flgF;gene_synonym=flaX,flgF;locus_tag=YPO1803
NC_003143.1	RefSeq	CDS	2047414	2048043	.	+	0	ID=cds1673;Name=YP_002346798.1;Parent=gene1749;Note=FlgF%2C with FlgB and C%2C makes up the proximal portion of the flagellar basal body rod%3B Yersinia contains two copies of this and other flagella genes;Dbxref=InterPro:IPR001444,InterPro:IPR012836,UniProtKB%2FTrEMBL:Q7CHY0,Genbank:YP_002346798.1,GeneID:1174638;gbkey=CDS;gene=flgF;product=flagellar basal body rod protein FlgF;protein_id=YP_002346798.1;transl_table=11
NC_003143.1	RefSeq	region	2047444	2047506	.	+	.	ID=id1234;Note=PS00588 Flagella basal body rod proteins signature.;Dbxref=GeneID:1174638;gbkey=misc_feature;gene=flgF
NC_003143.1	RefSeq	gene	2048024	2048722	.	+	.	ID=gene1750;Name=flaL;Note=fla FVII;Dbxref=GeneID:1174639;gbkey=Gene;gene=flaL;gene_synonym=flaL,flgG;locus_tag=YPO1804
NC_003143.1	RefSeq	CDS	2048024	2048722	.	+	0	ID=cds1674;Name=YP_002346799.1;Parent=gene1750;Dbxref=InterPro:IPR010930,InterPro:IPR012834,UniProtKB%2FTrEMBL:Q7CHY1,Genbank:YP_002346799.1,GeneID:1174639;gbkey=CDS;gene=flaL;product=flagellar basal-body rod protein FlgG;protein_id=YP_002346799.1;transl_table=11
NC_003143.1	RefSeq	gene	2048866	2049555	.	+	.	ID=gene1751;Name=flgH;Note=fla FVIII;Dbxref=GeneID:1174640;gbkey=Gene;gene=flgH;gene_synonym=flaY,flgH;locus_tag=YPO1805
NC_003143.1	RefSeq	CDS	2048866	2049555	.	+	0	ID=cds1675;Name=YP_002346800.1;Parent=gene1751;Note=part of the flagellar basal body which consists of four rings L%2CP%2C S and M mounted on a central rod;Dbxref=InterPro:IPR000527,UniProtKB%2FTrEMBL:Q0WFY8,Genbank:YP_002346800.1,GeneID:1174640;gbkey=CDS;gene=flgH;product=flagellar basal body L-ring protein;protein_id=YP_002346800.1;transl_table=11
NC_003143.1	RefSeq	gene	2049570	2050679	.	+	.	ID=gene1752;Name=flgI;Note=fla FIX;Dbxref=GeneID:1174641;gbkey=Gene;gene=flgI;gene_synonym=flaM,flgI;locus_tag=YPO1806
NC_003143.1	RefSeq	CDS	2049570	2050679	.	+	0	ID=cds1676;Name=YP_002346801.1;Parent=gene1752;Note=part of the basal body which consists of four rings L%2C P%2C S%2C and M mounted on a central rod%3B Vibrio parahaemolyticus%2C Yersinia%2C Bradyrhizobium and other bacteria have two copies of this and other flagellar genes%3B the V. parahaemolyticus protein is associated with the polar flagella and the Bradyrhizobium protein is associated with the thick flagellum;Dbxref=InterPro:IPR001782,UniProtKB%2FTrEMBL:Q0WFY7,Genbank:YP_002346801.1,GeneID:1174641;gbkey=CDS;gene=flgI;product=flagellar basal body P-ring biosynthesis protein FlgA;protein_id=YP_002346801.1;transl_table=11
NC_003143.1	RefSeq	gene	2050679	2051623	.	+	.	ID=gene1753;Name=flgJ;Note=fla FX;Dbxref=GeneID:1174642;gbkey=Gene;gene=flgJ;gene_synonym=flaZ,flgJ;locus_tag=YPO1807
NC_003143.1	RefSeq	CDS	2050679	2051623	.	+	0	ID=cds1677;Name=YP_002346802.1;Parent=gene1753;Note=Flagellum-specific muramidase which hydrolyzes the peptidoglycan layer to assemble the rod structure in the periplasmic space;Dbxref=InterPro:IPR000423,InterPro:IPR002901,InterPro:IPR013377,UniProtKB%2FTrEMBL:Q7CHY2,Genbank:YP_002346802.1,GeneID:1174642;gbkey=CDS;gene=flgJ;product=flagellar rod assembly protein%2Fmuramidase FlgJ;protein_id=YP_002346802.1;transl_table=11
NC_003143.1	RefSeq	repeat_region	2051632	2052326	.	+	.	ID=id1235;Note=approx. 5 x 143 bp repeats;gbkey=repeat_region
NC_003143.1	RefSeq	gene	2052494	2054158	.	+	.	ID=gene1754;Name=flgK;Dbxref=GeneID:1174643;gbkey=Gene;gene=flgK;gene_synonym=flaW,flgK;locus_tag=YPO1808
NC_003143.1	RefSeq	CDS	2052494	2054158	.	+	0	ID=cds1678;Name=YP_002346803.1;Parent=gene1754;Note=with FlgL acts as a hook filament junction protein to join the flagellar filament to the hook;Dbxref=InterPro:IPR001444,InterPro:IPR002371,InterPro:IPR010930,UniProtKB%2FTrEMBL:Q7CHY3,Genbank:YP_002346803.1,GeneID:1174643;gbkey=CDS;gene=flgK;product=flagellar hook-associated protein FlgK;protein_id=YP_002346803.1;transl_table=11
NC_003143.1	RefSeq	gene	2054264	2055277	.	+	.	ID=gene1755;Name=flgL;Dbxref=GeneID:1174644;gbkey=Gene;gene=flgL;gene_synonym=flaU,flgL;locus_tag=YPO1809
NC_003143.1	RefSeq	CDS	2054264	2055277	.	+	0	ID=cds1679;Name=YP_002346804.1;Parent=gene1755;Note=with FlgK acts as a hook filament junction protein to join the flagellar filament to the hook%3B Yersinia%2C Vibrio parahaemolyticus%2C Bradyrhizobium and other organisms have 2 copies of this and other flagellar genes;Dbxref=InterPro:IPR001029,InterPro:IPR001492,InterPro:IPR013384,UniProtKB%2FTrEMBL:Q0WFY4,Genbank:YP_002346804.1,GeneID:1174644;gbkey=CDS;gene=flgL;product=flagellar hook-associated protein FlgL;protein_id=YP_002346804.1;transl_table=11
NC_003143.1	RefSeq	gene	2055306	2056283	.	-	.	ID=gene1756;Name=YPO1810;Dbxref=GeneID:1174645;gbkey=Gene;locus_tag=YPO1810
NC_003143.1	RefSeq	CDS	2055306	2056283	.	-	0	ID=cds1680;Name=YP_002346805.1;Parent=gene1756;Dbxref=InterPro:IPR007324,InterPro:IPR009057,InterPro:IPR011991,UniProtKB%2FTrEMBL:Q0WFY3,Genbank:YP_002346805.1,GeneID:1174645;gbkey=CDS;product=transcriptional regulator;protein_id=YP_002346805.1;transl_table=11
NC_003143.1	RefSeq	region	2056014	2056064	.	-	.	ID=id1236;Note=PS00237 G-protein coupled receptors signature.;Dbxref=GeneID:1174645;gbkey=misc_feature
NC_003143.1	RefSeq	region	2056128	2056193	.	-	.	ID=id1237;Note=Predicted helix-turn-helix motif with score 2191 %28%2B6.65 SD%29 at aa 39-60%2C sequence LKQSDIAEILGVSRATVINYLN;Dbxref=GeneID:1174645;gbkey=misc_feature
NC_003143.1	RefSeq	gene	2056525	2058591	.	+	.	ID=gene1757;Name=YPO1811;Dbxref=GeneID:1174646;gbkey=Gene;locus_tag=YPO1811
NC_003143.1	RefSeq	CDS	2056525	2058591	.	+	0	ID=cds1681;Name=YP_002346806.1;Parent=gene1757;Dbxref=InterPro:IPR001303,InterPro:IPR002198,InterPro:IPR002347,UniProtKB%2FTrEMBL:Q7CHY4,Genbank:YP_002346806.1,GeneID:1174646;gbkey=CDS;product=short chain dehydrogenase;protein_id=YP_002346806.1;transl_table=11
NC_003143.1	RefSeq	region	2058241	2058327	.	+	.	ID=id1238;Note=PS00061 Short-chain dehydrogenases%2Freductases family signature.;Dbxref=GeneID:1174646;gbkey=misc_feature
NC_003143.1	RefSeq	region	2058289	2058336	.	+	.	ID=id1239;Note=PS00038 Myc-type%2C %27helix-loop-helix%27 dimerization domain signature.;Dbxref=GeneID:1174646;gbkey=misc_feature
NC_003143.1	RefSeq	gene	2058739	2059800	.	+	.	ID=gene1758;Name=YPO1812;Dbxref=GeneID:1174647;gbkey=Gene;locus_tag=YPO1812
NC_003143.1	RefSeq	CDS	2058739	2059800	.	+	0	ID=cds1682;Name=YP_002346807.1;Parent=gene1758;Dbxref=InterPro:IPR001851,UniProtKB%2FTrEMBL:Q0WFY1,Genbank:YP_002346807.1,GeneID:1174647;gbkey=CDS;product=sugar transport system permease;protein_id=YP_002346807.1;transl_table=11
NC_003143.1	RefSeq	gene	2059843	2060838	.	+	.	ID=gene1759;Name=YPO1813;Dbxref=GeneID:1174648;gbkey=Gene;locus_tag=YPO1813
NC_003143.1	RefSeq	CDS	2059843	2060838	.	+	0	ID=cds1683;Name=YP_002346808.1;Parent=gene1759;Dbxref=UniProtKB%2FTrEMBL:Q7CHY5,Genbank:YP_002346808.1,GeneID:1174648;gbkey=CDS;product=sugar-binding protein;protein_id=YP_002346808.1;transl_table=11
NC_003143.1	RefSeq	gene	2060904	2062481	.	+	.	ID=gene1760;Name=YPO1814;Dbxref=GeneID:1174649;gbkey=Gene;locus_tag=YPO1814
NC_003143.1	RefSeq	CDS	2060904	2062481	.	+	0	ID=cds1684;Name=YP_002346809.1;Parent=gene1760;Dbxref=InterPro:IPR003439,InterPro:IPR003593,UniProtKB%2FTrEMBL:Q0WFX9,Genbank:YP_002346809.1,GeneID:1174649;gbkey=CDS;product=sugar ABC transporter ATP-binding protein;protein_id=YP_002346809.1;transl_table=11
NC_003143.1	RefSeq	region	2061060	2061083	.	+	.	ID=id1240;Note=PS00017 ATP%2FGTP-binding site motif A %28P-loop%29.;Dbxref=GeneID:1174649;gbkey=misc_feature
NC_003143.1	RefSeq	region	2062161	2062205	.	+	.	ID=id1241;Note=PS00211 ABC transporters family signature.;Dbxref=GeneID:1174649;gbkey=misc_feature
NC_003143.1	RefSeq	gene	2062577	2063506	.	+	.	ID=gene1761;Name=YPO1815;Dbxref=GeneID:1174650;gbkey=Gene;locus_tag=YPO1815
NC_003143.1	RefSeq	CDS	2062577	2063506	.	+	0	ID=cds1685;Name=YP_002346810.1;Parent=gene1761;Dbxref=InterPro:IPR001851,UniProtKB%2FTrEMBL:Q0WFX8,Genbank:YP_002346810.1,GeneID:1174650;gbkey=CDS;product=sugar ABC transporter permease;protein_id=YP_002346810.1;transl_table=11
NC_003143.1	RefSeq	gene	2063555	2064514	.	+	.	ID=gene1762;Name=YPO1816;Dbxref=GeneID:1174651;gbkey=Gene;locus_tag=YPO1816
NC_003143.1	RefSeq	CDS	2063555	2064514	.	+	0	ID=cds1686;Name=YP_002346811.1;Parent=gene1762;Dbxref=InterPro:IPR011611,UniProtKB%2FTrEMBL:Q74UW7,Genbank:YP_002346811.1,GeneID:1174651;gbkey=CDS;product=sugar kinase;protein_id=YP_002346811.1;transl_table=11
NC_003143.1	RefSeq	gene	2064772	2065191	.	-	.	ID=gene1763;Name=YPO1817;Dbxref=GeneID:1174652;gbkey=Gene;locus_tag=YPO1817
NC_003143.1	RefSeq	CDS	2064772	2065191	.	-	0	ID=cds1687;Name=YP_002346812.1;Parent=gene1763;Dbxref=InterPro:IPR005357,InterPro:IPR010985,UniProtKB%2FTrEMBL:Q7CHY6,Genbank:YP_002346812.1,GeneID:1174652;gbkey=CDS;product=hypothetical protein;protein_id=YP_002346812.1;transl_table=11
NC_003143.1	RefSeq	gene	2065236	2065418	.	-	.	ID=gene1764;Name=YPO1818;Dbxref=GeneID:1174653;gbkey=Gene;locus_tag=YPO1818
NC_003143.1	RefSeq	CDS	2065236	2065418	.	-	0	ID=cds1688;Name=YP_002346813.2;Parent=gene1764;Dbxref=InterPro:IPR012933,UniProtKB%2FTrEMBL:Q7CHY7,Genbank:YP_002346813.2,GeneID:1174653;gbkey=CDS;product=hypothetical protein;protein_id=YP_002346813.2;transl_table=11
NC_003143.1	RefSeq	gene	2065625	2066407	.	-	.	ID=gene1765;Name=fliR;Dbxref=GeneID:1174654;gbkey=Gene;gene=fliR;gene_synonym=mopE;locus_tag=YPO1819
NC_003143.1	RefSeq	CDS	2065625	2066407	.	-	0	ID=cds1689;Name=YP_002346814.1;Parent=gene1765;Note=FliR%2C with proteins FliP and FliQ%2C forms the core of the central channel in the flagella export apparatus;Dbxref=InterPro:IPR002010,InterPro:IPR006303,UniProtKB%2FTrEMBL:Q7CHY8,Genbank:YP_002346814.1,GeneID:1174654;gbkey=CDS;gene=fliR;product=flagellar biosynthesis protein FliR;protein_id=YP_002346814.1;transl_table=11
NC_003143.1	RefSeq	gene	2066410	2066679	.	-	.	ID=gene1766;Name=fliQ;Dbxref=GeneID:1174655;gbkey=Gene;gene=fliQ;gene_synonym=mopD;locus_tag=YPO1820a
NC_003143.1	RefSeq	CDS	2066410	2066679	.	-	0	ID=cds1690;Name=YP_002346815.1;Parent=gene1766;Note=with proteins FliP and FliR forms the core of the central channel in the flagella export apparatus;Dbxref=InterPro:IPR002191,InterPro:IPR006305,UniProtKB%2FTrEMBL:Q7CHY9,Genbank:YP_002346815.1,GeneID:1174655;gbkey=CDS;gene=fliQ;product=flagellar biosynthesis protein FliQ;protein_id=YP_002346815.1;transl_table=11
NC_003143.1	RefSeq	gene	2066785	2067609	.	-	.	ID=gene1767;Name=fliP;Dbxref=GeneID:1174656;gbkey=Gene;gene=fliP;gene_synonym=mopC;locus_tag=YPO1820
NC_003143.1	RefSeq	CDS	2066785	2067609	.	-	0	ID=cds1691;Name=YP_002346816.1;Parent=gene1767;Note=FliP%2C with proteins FliQ and FliR%2C forms the core of the central channel in the flagella export apparatus;Dbxref=InterPro:IPR005837,InterPro:IPR005838,UniProtKB%2FTrEMBL:Q0WFX2,Genbank:YP_002346816.1,GeneID:1174656;gbkey=CDS;gene=fliP;product=flagellar biosynthesis protein FliP;protein_id=YP_002346816.1;transl_table=11
NC_003143.1	RefSeq	region	2066827	2066865	.	-	.	ID=id1242;Note=PS01061 Flagella transport protein fliP family signature 2.;Dbxref=GeneID:1174656;gbkey=misc_feature;gene=fliP
NC_003143.1	RefSeq	region	2066962	2067009	.	-	.	ID=id1243;Note=PS01060 Flagella transport protein fliP family signature 1.;Dbxref=GeneID:1174656;gbkey=misc_feature;gene=fliP
NC_003143.1	RefSeq	gene	2067606	2068142	.	-	.	ID=gene1768;Name=fliO;Dbxref=GeneID:1174657;gbkey=Gene;gene=fliO;gene_synonym=mopB;locus_tag=YPO1821
NC_003143.1	RefSeq	CDS	2067606	2068142	.	-	0	ID=cds1692;Name=YP_002346817.2;Parent=gene1768;Dbxref=InterPro:IPR007442,UniProtKB%2FTrEMBL:Q0WFX1,Genbank:YP_002346817.2,GeneID:1174657;gbkey=CDS;gene=fliO;product=flagellar protein FliO;protein_id=YP_002346817.2;transl_table=11
NC_003143.1	RefSeq	region	2067891	2067956	.	-	.	ID=id1244;Note=1 probable transmembrane helix predicted;Dbxref=GeneID:1174657;gbkey=misc_feature;gene=fliO
NC_003143.1	RefSeq	gene	2068142	2068558	.	-	.	ID=gene1769;Name=fliN;Dbxref=GeneID:1174658;gbkey=Gene;gene=fliN;gene_synonym=motD;locus_tag=YPO1822
NC_003143.1	RefSeq	CDS	2068142	2068558	.	-	0	ID=cds1693;Name=YP_002346818.1;Parent=gene1769;Note=One of three proteins involved in switching the direction of the flagellar rotation;Dbxref=InterPro:IPR001172,InterPro:IPR001543,InterPro:IPR012826,UniProtKB%2FTrEMBL:Q7CHZ0,Genbank:YP_002346818.1,GeneID:1174658;gbkey=CDS;gene=fliN;product=flagellar motor switch protein FliN;protein_id=YP_002346818.1;transl_table=11
NC_003143.1	RefSeq	gene	2068555	2069556	.	-	.	ID=gene1770;Name=fliM;Dbxref=GeneID:1174659;gbkey=Gene;gene=fliM;gene_synonym=fla AII,fla QII,fliM;locus_tag=YPO1823
NC_003143.1	RefSeq	CDS	2068555	2069556	.	-	0	ID=cds1694;Name=YP_002346819.1;Parent=gene1770;Note=with FliG and FliN makes up the switch complex which is involved in switching the direction of the flagella rotation;Dbxref=InterPro:IPR001543,InterPro:IPR001689,UniProtKB%2FTrEMBL:Q7CHZ1,Genbank:YP_002346819.1,GeneID:1174659;gbkey=CDS;gene=fliM;product=flagellar motor switch protein FliM;protein_id=YP_002346819.1;transl_table=11
NC_003143.1	RefSeq	gene	2069562	2070032	.	-	.	ID=gene1771;Name=fliL;Dbxref=GeneID:1174660;gbkey=Gene;gene=fliL;gene_synonym=fla AI,fla QI,fliL;locus_tag=YPO1824
NC_003143.1	RefSeq	CDS	2069562	2070032	.	-	0	ID=cds1695;Name=YP_002346820.1;Parent=gene1771;Note=interacts with cytoplasmic MS ring of the basal body and may act to stabilize the MotAB complexes which surround the MS ring;Dbxref=InterPro:IPR005503,UniProtKB%2FTrEMBL:Q74UX4,Genbank:YP_002346820.1,GeneID:1174660;gbkey=CDS;gene=fliL;product=flagellar basal body protein FliL;protein_id=YP_002346820.1;transl_table=11
NC_003143.1	RefSeq	gene	2070299	2071651	.	-	.	ID=gene1772;Name=fliK;Dbxref=GeneID:1174661;gbkey=Gene;gene=fliK;locus_tag=YPO1825
NC_003143.1	RefSeq	CDS	2070299	2071651	.	-	0	ID=cds1696;Name=YP_002346821.1;Parent=gene1772;Dbxref=InterPro:IPR001635,UniProtKB%2FTrEMBL:Q7CHZ2,Genbank:YP_002346821.1,GeneID:1174661;gbkey=CDS;gene=fliK;product=flagellar hook-length control protein FliK;protein_id=YP_002346821.1;transl_table=11
NC_003143.1	RefSeq	region	2070974	2070997	.	-	.	ID=id1245;Note=PS00017 ATP%2FGTP-binding site motif A %28P-loop%29.;Dbxref=GeneID:1174661;gbkey=misc_feature;gene=fliK
NC_003143.1	RefSeq	gene	2071648	2072094	.	-	.	ID=gene1773;Name=fliJ;Dbxref=GeneID:1174662;gbkey=Gene;gene=fliJ;gene_synonym=flaS,fliJ;locus_tag=YPO1826
NC_003143.1	RefSeq	CDS	2071648	2072094	.	-	0	ID=cds1697;Name=YP_002346822.1;Parent=gene1773;Note=rod%2Fhook and filament chaperone;Dbxref=InterPro:IPR000809,InterPro:IPR011567,InterPro:IPR012823,UniProtKB%2FTrEMBL:Q7CHZ3,Genbank:YP_002346822.1,GeneID:1174662;gbkey=CDS;gene=fliJ;product=flagellar biosynthesis chaperone;protein_id=YP_002346822.1;transl_table=11
NC_003143.1	RefSeq	gene	2072194	2073648	.	-	.	ID=gene1774;Name=fliI;Note=fla AIII;Dbxref=GeneID:1174663;gbkey=Gene;gene=fliI;gene_synonym=flaC,fliI;locus_tag=YPO1827
NC_003143.1	RefSeq	CDS	2072194	2073648	.	-	0	ID=cds1698;Name=YP_002346823.1;Parent=gene1774;Note=involved in type III protein export during flagellum assembly;Dbxref=InterPro:IPR000194,InterPro:IPR003593,InterPro:IPR005714,InterPro:IPR013379,UniProtKB%2FTrEMBL:Q0WFW5,Genbank:YP_002346823.1,GeneID:1174663;gbkey=CDS;gene=fliI;product=flagellum-specific ATP synthase;protein_id=YP_002346823.1;transl_table=11
NC_003143.1	RefSeq	region	2072443	2072472	.	-	.	ID=id1246;Note=PS00152 ATP synthase alpha and beta subunits signature.;Dbxref=GeneID:1174663;gbkey=misc_feature;gene=fliI
NC_003143.1	RefSeq	region	2072995	2073018	.	-	.	ID=id1247;Note=PS00017 ATP%2FGTP-binding site motif A %28P-loop%29.;Dbxref=GeneID:1174663;gbkey=misc_feature;gene=fliI
NC_003143.1	RefSeq	gene	2073611	2074327	.	-	.	ID=gene1775;Name=fliH;Note=fla AII.3;Dbxref=GeneID:1174664;gbkey=Gene;gene=fliH;gene_synonym=fla BIII,fliH;locus_tag=YPO1828
NC_003143.1	RefSeq	CDS	2073611	2074327	.	-	0	ID=cds1699;Name=YP_002346824.1;Parent=gene1775;Note=binds to and inhibits the function of flagella specific ATPase FliI;Dbxref=InterPro:IPR000563,UniProtKB%2FTrEMBL:Q0WFW4,Genbank:YP_002346824.1,GeneID:1174664;gbkey=CDS;gene=fliH;product=flagellar assembly protein H;protein_id=YP_002346824.1;transl_table=11
NC_003143.1	RefSeq	gene	2074320	2075312	.	-	.	ID=gene1776;Name=fliG;Note=fla AII.2;Dbxref=GeneID:1174665;gbkey=Gene;gene=fliG;gene_synonym=fla BII,fliG;locus_tag=YPO1829
NC_003143.1	RefSeq	CDS	2074320	2075312	.	-	0	ID=cds1700;Name=YP_002346825.1;Parent=gene1776;Note=One of three proteins involved in switching the direction of the flagellar rotation;Dbxref=InterPro:IPR000090,InterPro:IPR011002,UniProtKB%2FTrEMBL:Q7CHZ4,Genbank:YP_002346825.1,GeneID:1174665;gbkey=CDS;gene=fliG;product=flagellar motor switch protein G;protein_id=YP_002346825.1;transl_table=11
NC_003143.1	RefSeq	gene	2075309	2077021	.	-	.	ID=gene1777;Name=fliF;Note=fla AII.1;Dbxref=GeneID:1174666;gbkey=Gene;gene=fliF;gene_synonym=fla BI,fliF;locus_tag=YPO1830
NC_003143.1	RefSeq	CDS	2075309	2077021	.	-	0	ID=cds1701;Name=YP_002346826.1;Parent=gene1777;Note=the MS-ring anchors the flagellum to the cytoplasmic membrane%3B part of the flagellar basal body which consists of four rings L%2C P%2C S%2C and M mounted on a central rod;Dbxref=InterPro:IPR000067,InterPro:IPR006182,InterPro:IPR013556,UniProtKB%2FTrEMBL:Q7CHZ5,Genbank:YP_002346826.1,GeneID:1174666;gbkey=CDS;gene=fliF;product=flagellar MS-ring protein;protein_id=YP_002346826.1;transl_table=11
NC_003143.1	RefSeq	region	2076881	2076937	.	-	.	ID=id1248;Note=1 probable transmembrane helix predicted;Dbxref=GeneID:1174666;gbkey=misc_feature;gene=fliF
NC_003143.1	RefSeq	gene	2077374	2077685	.	+	.	ID=gene1778;Name=fliE;Note=fla AI;Dbxref=GeneID:1174667;gbkey=Gene;gene=fliE;gene_synonym=flaN,fliE;locus_tag=YPO1831
NC_003143.1	RefSeq	CDS	2077374	2077685	.	+	0	ID=cds1702;Name=YP_002346827.1;Parent=gene1778;Note=forms a junction between the M-ring and FlgB during flagella biosynthesis;Dbxref=InterPro:IPR001624,UniProtKB%2FTrEMBL:Q0WFW1,Genbank:YP_002346827.1,GeneID:1174667;gbkey=CDS;gene=fliE;product=flagellar hook-basal body protein FliE;protein_id=YP_002346827.1;transl_table=11
NC_003143.1	RefSeq	gene	2078073	2078252	.	+	.	ID=gene1779;Name=YPO1832;Dbxref=GeneID:1174668;gbkey=Gene;locus_tag=YPO1832
NC_003143.1	RefSeq	CDS	2078073	2078252	.	+	0	ID=cds1703;Name=YP_002346828.2;Parent=gene1779;Note=No significant database hits;Dbxref=UniProtKB%2FTrEMBL:Q74UY1,Genbank:YP_002346828.2,GeneID:1174668;gbkey=CDS;product=hypothetical protein;protein_id=YP_002346828.2;transl_table=11
NC_003143.1	RefSeq	gene	2078263	2078739	.	+	.	ID=gene1780;Name=YPO1833;Dbxref=GeneID:1174669;gbkey=Gene;locus_tag=YPO1833
NC_003143.1	RefSeq	CDS	2078263	2078739	.	+	0	ID=cds1704;Name=YP_002346829.1;Parent=gene1780;Dbxref=InterPro:IPR006440,UniProtKB%2FTrEMBL:Q7CHZ6,Genbank:YP_002346829.1,GeneID:1174669;gbkey=CDS;product=hypothetical protein;protein_id=YP_002346829.1;transl_table=11
NC_003143.1	RefSeq	gene	2078925	2079536	.	-	.	ID=gene1781;Name=YPO1834;Dbxref=GeneID:1174670;gbkey=Gene;locus_tag=YPO1834
NC_003143.1	RefSeq	CDS	2078925	2079536	.	-	0	ID=cds1705;Name=YP_002346830.1;Parent=gene1781;Dbxref=InterPro:IPR003265,InterPro:IPR003583,InterPro:IPR011257,UniProtKB%2FTrEMBL:Q7CHZ7,Genbank:YP_002346830.1,GeneID:1174670;gbkey=CDS;product=glycosidase;protein_id=YP_002346830.1;transl_table=11
NC_003143.1	RefSeq	region	2079447	2079476	.	-	.	ID=id1249;Note=PS00339 Aminoacyl-transfer RNA synthetases class-II signature 2.;Dbxref=GeneID:1174670;gbkey=misc_feature
NC_003143.1	RefSeq	gene	2079697	2082652	.	-	.	ID=gene1782;Name=YPO1835;Dbxref=GeneID:1174671;gbkey=Gene;locus_tag=YPO1835;pseudo=true
NC_003143.1	RefSeq	gene	2083006	2083881	.	-	.	ID=gene1783;Name=YPO1837;Dbxref=GeneID:1174672;gbkey=Gene;locus_tag=YPO1837
NC_003143.1	RefSeq	CDS	2083006	2083881	.	-	0	ID=cds1706;Name=YP_002346831.1;Parent=gene1783;Dbxref=InterPro:IPR000005,InterPro:IPR009057,InterPro:IPR011009,InterPro:IPR012287,UniProtKB%2FTrEMBL:Q0WFV7,Genbank:YP_002346831.1,GeneID:1174672;gbkey=CDS;product=AraC family transcriptional regulator;protein_id=YP_002346831.1;transl_table=11
NC_003143.1	RefSeq	region	2083099	2083227	.	-	.	ID=id1250;Note=PS00041 Bacterial regulatory proteins%2C araC family signature.;Dbxref=GeneID:1174672;gbkey=misc_feature
NC_003143.1	RefSeq	region	2083267	2083332	.	-	.	ID=id1251;Note=Predicted helix-turn-helix motif with score 1305 %28%2B3.63 SD%29 at aa 184-205%2C sequence WSASEVAEHMTMSEVVLRRKLA;Dbxref=GeneID:1174672;gbkey=misc_feature
NC_003143.1	RefSeq	gene	2084182	2084544	.	-	.	ID=gene1784;Name=fliT;Dbxref=GeneID:1174674;gbkey=Gene;gene=fliT;locus_tag=YPO1839
NC_003143.1	RefSeq	CDS	2084182	2084544	.	-	0	ID=cds1707;Name=YP_002346833.1;Parent=gene1784;Note=binds flagellar cap subunits %28FliD%29 and seems to prevents their oligomerization prior to its translocation through the flagellum-specific type III export pathway%3B acts as a repressor of flagellar class 2 operons by preventing FlhD2C2 to bind the promoter and inhibiting the FlhD2C2-dependent transcription%3B member of the type III cytoplasmic chaperone family;Dbxref=InterPro:IPR008622,UniProtKB%2FTrEMBL:Q0WFV5,Genbank:YP_002346833.1,GeneID:1174674;gbkey=CDS;gene=fliT;product=flagellar biosynthesis protein FliT;protein_id=YP_002346833.1;transl_table=11
NC_003143.1	RefSeq	gene	2084555	2084953	.	-	.	ID=gene1785;Name=fliS;Dbxref=GeneID:1174675;gbkey=Gene;gene=fliS;locus_tag=YPO1840
NC_003143.1	RefSeq	CDS	2084555	2084953	.	-	0	ID=cds1708;Name=YP_002346834.1;Parent=gene1785;Note=flagellin specific chaperone;Dbxref=InterPro:IPR003713,UniProtKB%2FTrEMBL:Q7CHZ8,Genbank:YP_002346834.1,GeneID:1174675;gbkey=CDS;gene=fliS;product=flagellar protein FliS;protein_id=YP_002346834.1;transl_table=11
NC_003143.1	RefSeq	gene	2084964	2086364	.	-	.	ID=gene1786;Name=fliD;Dbxref=GeneID:1174676;gbkey=Gene;gene=fliD;gene_synonym=flbC,fliD;locus_tag=YPO1841
NC_003143.1	RefSeq	CDS	2084964	2086364	.	-	0	ID=cds1709;Name=YP_002346835.1;Parent=gene1786;Note=involved in flagellin assembly;Dbxref=InterPro:IPR003481,InterPro:IPR010809,InterPro:IPR010810,UniProtKB%2FTrEMBL:Q7CHZ9,Genbank:YP_002346835.1,GeneID:1174676;gbkey=CDS;gene=fliD;product=flagellar capping protein;protein_id=YP_002346835.1;transl_table=11
NC_003143.1	RefSeq	gene	2086661	2087770	.	+	.	ID=gene1787;Name=fliC;Dbxref=GeneID:1174677;gbkey=Gene;gene=fliC;gene_synonym=hag;locus_tag=YPO1842
NC_003143.1	RefSeq	CDS	2086661	2087770	.	+	0	ID=cds1710;Name=YP_002346836.1;Parent=gene1787;Note=structural flagella protein;Dbxref=InterPro:IPR001029,InterPro:IPR001492,UniProtKB%2FTrEMBL:Q7CI00,Genbank:YP_002346836.1,GeneID:1174677;gbkey=CDS;gene=fliC;product=flagellin;protein_id=YP_002346836.1;transl_table=11
NC_003143.1	RefSeq	gene	2088117	2088839	.	+	.	ID=gene1788;Name=fliA;Dbxref=GeneID:1174678;gbkey=Gene;gene=fliA;locus_tag=YPO1843
NC_003143.1	RefSeq	CDS	2088117	2088839	.	+	0	ID=cds1711;Name=YP_002346837.1;Parent=gene1788;Note=sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released%3B this sigma factor directs late flagellar biosynthesis genes;Dbxref=InterPro:IPR000943,InterPro:IPR007624,InterPro:IPR007627,InterPro:IPR007630,InterPro:IPR011991,InterPro:IPR012845,InterPro:IPR013324,InterPro:IPR013325,UniProtKB%2FTrEMBL:Q7CI01,Genbank:YP_002346837.1,GeneID:1174678;gbkey=CDS;gene=fliA;product=flagellar biosynthesis sigma factor;protein_id=YP_002346837.1;transl_table=11
NC_003143.1	RefSeq	region	2088729	2088794	.	+	.	ID=id1252;Note=Predicted helix-turn-helix motif with score 1242 %28%2B3.42 SD%29 at aa 205-226%2C sequence LNLKEIGAVLEVGESRVSQLHS;Dbxref=GeneID:1174678;gbkey=misc_feature;gene=fliA
NC_003143.1	RefSeq	region	2088732	2088812	.	+	.	ID=id1253;Note=PS00716 Sigma-70 factors family signature 2.;Dbxref=GeneID:1174678;gbkey=misc_feature;gene=fliA
NC_003143.1	RefSeq	gene	2089061	2089570	.	+	.	ID=gene1789;Name=fliZ;Dbxref=GeneID:1174679;gbkey=Gene;gene=fliZ;locus_tag=YPO1844
NC_003143.1	RefSeq	CDS	2089061	2089570	.	+	0	ID=cds1712;Name=YP_002346838.1;Parent=gene1789;Note=expression activator of the class 2 type of flagellar operons%2C essential to achieve maximal cell motility%3B activator of type 1 fimbrial gene expression%3B cell density-responsive regulator%3B FliZ in Salmonella typhimurium induces HilA%2C an activator of invasion genes necessary to achieve full virulence;Dbxref=InterPro:IPR004107,UniProtKB%2FTrEMBL:Q7CI02,Genbank:YP_002346838.1,GeneID:1174679;gbkey=CDS;gene=fliZ;product=flagella biosynthesis protein FliZ;protein_id=YP_002346838.1;transl_table=11
NC_003143.1	RefSeq	gene	2089859	2090851	.	+	.	ID=gene1790;Name=yedO;Dbxref=GeneID:1174680;gbkey=Gene;gene=yedO;locus_tag=YPO1845
NC_003143.1	RefSeq	CDS	2089859	2090851	.	+	0	ID=cds1713;Name=YP_002346839.1;Parent=gene1790;Note=catalyzes the formation of pyruvate from D-cysteine;Dbxref=InterPro:IPR001926,InterPro:IPR005966,UniProtKB%2FTrEMBL:Q0WFU9,Genbank:YP_002346839.1,GeneID:1174680;gbkey=CDS;gene=yedO;product=D-cysteine desulfhydrase;protein_id=YP_002346839.1;transl_table=11
NC_003143.1	RefSeq	gene	2090975	2091775	.	+	.	ID=gene1791;Name=fliY;Dbxref=GeneID:1174681;gbkey=Gene;gene=fliY;locus_tag=YPO1846
NC_003143.1	RefSeq	CDS	2090975	2091775	.	+	0	ID=cds1714;Name=YP_002346840.1;Parent=gene1791;Dbxref=InterPro:IPR001638,UniProtKB%2FTrEMBL:Q7CI03,Genbank:YP_002346840.1,GeneID:1174681;gbkey=CDS;gene=fliY;product=cystine transporter subunit;protein_id=YP_002346840.1;transl_table=11
NC_003143.1	RefSeq	region	2091167	2091208	.	+	.	ID=id1254;Note=PS01039 Bacterial extracellular solute-binding proteins%2C family 3 signature.;Dbxref=GeneID:1174681;gbkey=misc_feature;gene=fliY
NC_003143.1	RefSeq	gene	2091775	2092437	.	+	.	ID=gene1792;Name=yecS;Dbxref=GeneID:1174682;gbkey=Gene;gene=yecS;locus_tag=YPO1847
NC_003143.1	RefSeq	CDS	2091775	2092437	.	+	0	ID=cds1715;Name=YP_002346841.1;Parent=gene1792;Dbxref=InterPro:IPR000515,InterPro:IPR010065,UniProtKB%2FTrEMBL:Q7CI04,Genbank:YP_002346841.1,GeneID:1174682;gbkey=CDS;gene=yecS;product=amino-acid ABC transporter permease;protein_id=YP_002346841.1;transl_table=11
NC_003143.1	RefSeq	region	2092105	2092191	.	+	.	ID=id1255;Note=PS00402 Binding-protein-dependent transport systems inner membrane comp. sign.;Dbxref=GeneID:1174682;gbkey=misc_feature;gene=yecS
NC_003143.1	RefSeq	gene	2092440	2093201	.	+	.	ID=gene1793;Name=yecC;Dbxref=GeneID:1174683;gbkey=Gene;gene=yecC;locus_tag=YPO1848
NC_003143.1	RefSeq	CDS	2092440	2093201	.	+	0	ID=cds1716;Name=YP_002346842.1;Parent=gene1793;Dbxref=InterPro:IPR003439,InterPro:IPR003593,UniProtKB%2FTrEMBL:Q7CI05,Genbank:YP_002346842.1,GeneID:1174683;gbkey=CDS;gene=yecC;product=amino-acid ABC transporter ATP-binding protein YecC;protein_id=YP_002346842.1;transl_table=11
NC_003143.1	RefSeq	region	2092545	2092568	.	+	.	ID=id1256;Note=PS00017 ATP%2FGTP-binding site motif A %28P-loop%29.;Dbxref=GeneID:1174683;gbkey=misc_feature;gene=yecC
NC_003143.1	RefSeq	region	2092872	2092916	.	+	.	ID=id1257;Note=PS00211 ABC transporters family signature.;Dbxref=GeneID:1174683;gbkey=misc_feature;gene=yecC
NC_003143.1	RefSeq	gene	2093493	2093831	.	-	.	ID=gene1794;Name=YPO1849;Dbxref=GeneID:1174684;gbkey=Gene;locus_tag=YPO1849
NC_003143.1	RefSeq	CDS	2093493	2093831	.	-	0	ID=cds1717;Name=YP_002346843.1;Parent=gene1794;Dbxref=InterPro:IPR000835,UniProtKB%2FTrEMBL:Q0WFU5,Genbank:YP_002346843.1,GeneID:1174684;gbkey=CDS;product=hypothetical protein;protein_id=YP_002346843.1;transl_table=11
NC_003143.1	RefSeq	gene	2093865	2094200	.	-	.	ID=gene1795;Name=YPO1850;Dbxref=GeneID:1174685;gbkey=Gene;locus_tag=YPO1850
NC_003143.1	RefSeq	CDS	2093865	2094200	.	-	0	ID=cds1718;Name=YP_002346844.1;Parent=gene1795;Note=No significant database hits;Dbxref=UniProtKB%2FTrEMBL:Q7CI06,Genbank:YP_002346844.1,GeneID:1174685;gbkey=CDS;product=hypothetical protein;protein_id=YP_002346844.1;transl_table=11
NC_003143.1	RefSeq	gene	2094664	2098635	.	-	.	ID=gene1796;Name=putA;Dbxref=GeneID:1174686;gbkey=Gene;gene=putA;locus_tag=YPO1851
NC_003143.1	RefSeq	CDS	2094664	2098635	.	-	0	ID=cds1719;Name=YP_002346845.1;Parent=gene1796;Note=proline utilization protein A%3B multifunctional protein that functions in proline catabolism in the first two enzymatic steps resulting in the conversion of proline to glutamate%3B in Escherichai coli this protein also self-regulates transcription via a DNA-binding domain at the N-terminus%3B forms dimers and is a peripherally membrane-associated protein;Dbxref=InterPro:IPR002086,InterPro:IPR002872,InterPro:IPR005933,InterPro:IPR010985,InterPro:IPR011350,UniProtKB%2FTrEMBL:Q0WFU3,Genbank:YP_002346845.1,GeneID:1174686;gbkey=CDS;gene=putA;product=trifunctional transcriptional regulator%2Fproline dehydrogenase%2Fpyrroline-5-carboxylate dehydrogenase;protein_id=YP_002346845.1;transl_table=11
NC_003143.1	RefSeq	region	2095870	2095905	.	-	.	ID=id1258;Note=PS00070 Aldehyde dehydrogenases cysteine active site.;Dbxref=GeneID:1174686;gbkey=misc_feature;gene=putA
NC_003143.1	RefSeq	region	2095966	2095989	.	-	.	ID=id1259;Note=PS00687 Aldehyde dehydrogenases glutamic acid active site.;Dbxref=GeneID:1174686;gbkey=misc_feature;gene=putA
NC_003143.1	RefSeq	region	2099007	2099075	.	+	.	ID=id1260;Note=1 probable transmembrane helix predicted;gbkey=misc_feature
NC_003143.1	RefSeq	gene	2099207	2100691	.	+	.	ID=gene1797;Name=putP;Dbxref=GeneID:1174688;gbkey=Gene;gene=putP;locus_tag=YPO1853
NC_003143.1	RefSeq	CDS	2099207	2100691	.	+	0	ID=cds1720;Name=YP_002346847.1;Parent=gene1797;Dbxref=InterPro:IPR001734,InterPro:IPR011851,UniProtKB%2FTrEMBL:Q7CI08,Genbank:YP_002346847.1,GeneID:1174688;gbkey=CDS;gene=putP;product=proline permease;protein_id=YP_002346847.1;transl_table=11
NC_003143.1	RefSeq	region	2099675	2099752	.	+	.	ID=id1261;Note=PS00456 Sodium:solute symporter family signature 1.;Dbxref=GeneID:1174688;gbkey=misc_feature;gene=putP
NC_003143.1	RefSeq	region	2100461	2100523	.	+	.	ID=id1262;Note=PS00457 Sodium:solute symporter family signature 2.;Dbxref=GeneID:1174688;gbkey=misc_feature;gene=putP
NC_003143.1	RefSeq	gene	2101024	2101872	.	+	.	ID=gene1798;Name=YPO1854;Dbxref=GeneID:1174689;gbkey=Gene;locus_tag=YPO1854
NC_003143.1	RefSeq	CDS	2101024	2101872	.	+	0	ID=cds1721;Name=YP_002346848.1;Parent=gene1798;Dbxref=InterPro:IPR002016,InterPro:IPR004923,UniProtKB%2FTrEMBL:Q0WFU0,Genbank:YP_002346848.1,GeneID:1174689;gbkey=CDS;product=hypothetical protein;protein_id=YP_002346848.1;transl_table=11
NC_003143.1	RefSeq	gene	2101902	2103032	.	+	.	ID=gene1799;Name=YPO1855;Dbxref=GeneID:1174690;gbkey=Gene;locus_tag=YPO1855
NC_003143.1	RefSeq	CDS	2101902	2103032	.	+	0	ID=cds1722;Name=YP_002346849.1;Parent=gene1799;Dbxref=InterPro:IPR007399,InterPro:IPR008972,UniProtKB%2FTrEMBL:Q0WFT9,Genbank:YP_002346849.1,GeneID:1174690;gbkey=CDS;product=hypothetical protein;protein_id=YP_002346849.1;transl_table=11
NC_003143.1	RefSeq	gene	2103043	2104347	.	+	.	ID=gene1800;Name=YPO1856;Dbxref=GeneID:1174691;gbkey=Gene;locus_tag=YPO1856
NC_003143.1	RefSeq	CDS	2103043	2104347	.	+	0	ID=cds1723;Name=YP_002346850.1;Parent=gene1800;Dbxref=InterPro:IPR006311,InterPro:IPR006313,InterPro:IPR006314,UniProtKB%2FTrEMBL:Q7CI09,Genbank:YP_002346850.1,GeneID:1174691;gbkey=CDS;product=hypothetical protein;protein_id=YP_002346850.1;transl_table=11
NC_003143.1	RefSeq	gene	2104433	2105032	.	-	.	ID=gene1801;Name=wrbA;Dbxref=GeneID:1174692;gbkey=Gene;gene=wrbA;locus_tag=YPO1857
NC_003143.1	RefSeq	CDS	2104433	2105032	.	-	0	ID=cds1724;Name=YP_002346851.1;Parent=gene1801;Note=stationary phase protein that binds TrpR repressor;Dbxref=InterPro:IPR008254,InterPro:IPR010089,UniProtKB%2FTrEMBL:Q0WFT7,Genbank:YP_002346851.1,GeneID:1174692;gbkey=CDS;gene=wrbA;product=TrpR binding protein WrbA;protein_id=YP_002346851.1;transl_table=11
NC_003143.1	RefSeq	gene	2105426	2106604	.	+	.	ID=gene1802;Name=YPO1858;Dbxref=GeneID:1174693;gbkey=Gene;locus_tag=YPO1858
NC_003143.1	RefSeq	CDS	2105426	2106604	.	+	0	ID=cds1725;Name=YP_002346852.1;Parent=gene1802;Dbxref=InterPro:IPR006652,InterPro:IPR011043,UniProtKB%2FTrEMBL:Q7CI10,Genbank:YP_002346852.1,GeneID:1174693;gbkey=CDS;product=N-acetylneuraminic acid mutarotase;protein_id=YP_002346852.1;transl_table=11
NC_003143.1	RefSeq	gene	2106730	2108154	.	-	.	ID=gene1803;Name=cycA;Dbxref=GeneID:1174694;gbkey=Gene;gene=cycA;gene_synonym=dagA;locus_tag=YPO1859
NC_003143.1	RefSeq	CDS	2106730	2108154	.	-	0	ID=cds1726;Name=YP_002346853.1;Parent=gene1803;Note=involved in the transport across the cytoplasmic membrane of D-alanine%2C D-serine and glycine;Dbxref=InterPro:IPR002293,InterPro:IPR004840,InterPro:IPR004841,UniProtKB%2FTrEMBL:Q7CI11,Genbank:YP_002346853.1,GeneID:1174694;gbkey=CDS;gene=cycA;product=D-alanine%2FD-serine%2Fglycine permease;protein_id=YP_002346853.1;transl_table=11
NC_003143.1	RefSeq	region	2107900	2107992	.	-	.	ID=id1263;Note=PS00218 Amino acid permeases signature.;Dbxref=GeneID:1174694;gbkey=misc_feature;gene=cycA
NC_003143.1	RefSeq	gene	2108507	2108582	.	+	.	ID=gene1804;Name=YPt_22;Dbxref=GeneID:1174695;gbkey=Gene;locus_tag=YPt_22
NC_003143.1	RefSeq	tRNA	2108507	2108582	.	+	.	ID=rna35;Parent=gene1804;Note=tRNA Lys anticodon CTT%2C Cove score 96.54;Dbxref=GeneID:1174695;gbkey=tRNA;product=tRNA-Lys
NC_003143.1	RefSeq	exon	2108507	2108582	.	+	.	ID=id1264;Parent=rna35;Note=tRNA Lys anticodon CTT%2C Cove score 96.54;Dbxref=GeneID:1174695;gbkey=tRNA;product=tRNA-Lys
NC_003143.1	RefSeq	gene	2109269	2109820	.	+	.	ID=gene1805;Name=ail;Dbxref=GeneID:1174696;gbkey=Gene;gene=ail;locus_tag=YPO1860
NC_003143.1	RefSeq	CDS	2109269	2109820	.	+	0	ID=cds1727;Name=YP_002346854.1;Parent=gene1805;Dbxref=InterPro:IPR000758,UniProtKB%2FTrEMBL:Q7CI12,Genbank:YP_002346854.1,GeneID:1174696;gbkey=CDS;gene=ail;product=attachment invasion locus protein;protein_id=YP_002346854.1;transl_table=11
NC_003143.1	RefSeq	region	2109791	2109817	.	+	.	ID=id1265;Note=PS00695 Enterobacterial virulence outer membrane protein signature 2.;Dbxref=GeneID:1174696;gbkey=misc_feature;gene=ail
NC_003143.1	RefSeq	gene	2110160	2110414	.	+	.	ID=gene1806;Name=YPO1862;Dbxref=GeneID:1174698;gbkey=Gene;locus_tag=YPO1862
NC_003143.1	RefSeq	CDS	2110160	2110414	.	+	0	ID=cds1728;Name=YP_002346856.1;Parent=gene1806;Dbxref=UniProtKB%2FTrEMBL:Q7CI13,Genbank:YP_002346856.1,GeneID:1174698;gbkey=CDS;product=hypothetical protein;protein_id=YP_002346856.1;transl_table=11
NC_003143.1	RefSeq	gene	2110442	2110783	.	-	.	ID=gene1807;Name=glpM;Dbxref=GeneID:1174699;gbkey=Gene;gene=glpM;gene_synonym=ydgC;locus_tag=YPO1863
NC_003143.1	RefSeq	CDS	2110442	2110783	.	-	0	ID=cds1729;Name=YP_002346857.1;Parent=gene1807;Dbxref=InterPro:IPR009707,UniProtKB%2FTrEMBL:Q0WFT1,Genbank:YP_002346857.1,GeneID:1174699;gbkey=CDS;gene=glpM;product=hypothetical protein;protein_id=YP_002346857.1;transl_table=11
NC_003143.1	RefSeq	gene	2110911	2111135	.	-	.	ID=gene1808;Name=YPO1864;Dbxref=GeneID:1174700;gbkey=Gene;locus_tag=YPO1864
NC_003143.1	RefSeq	CDS	2110911	2111135	.	-	0	ID=cds1730;Name=YP_002346858.1;Parent=gene1808;Dbxref=UniProtKB%2FTrEMBL:Q74V09,Genbank:YP_002346858.1,GeneID:1174700;gbkey=CDS;product=hypothetical protein;protein_id=YP_002346858.1;transl_table=11
NC_003143.1	RefSeq	gene	2111798	2112454	.	+	.	ID=gene1809;Name=uvrY;Dbxref=GeneID:1174701;gbkey=Gene;gene=uvrY;locus_tag=YPO1865
NC_003143.1	RefSeq	CDS	2111798	2112454	.	+	0	ID=cds1731;Name=YP_002346859.1;Parent=gene1809;Note=in Escherichia coli the protein UvrY is part of a two-component system along with BarA that is needed for efficient switching between glycolytic and gluconeogenic carbon sources possibly by regulating the Csr system%3B in Salmonella SirA and BarA regulate virulence gene expression also via the Csr system;Dbxref=InterPro:IPR000792,InterPro:IPR001789,InterPro:IPR011006,InterPro:IPR011991,UniProtKB%2FTrEMBL:Q7CI14,Genbank:YP_002346859.1,GeneID:1174701;gbkey=CDS;gene=uvrY;product=response regulator;protein_id=YP_002346859.1;transl_table=11
NC_003143.1	RefSeq	region	2112284	2112367	.	+	.	ID=id1266;Note=PS00622 Bacterial regulatory proteins%2C luxR family signature.;Dbxref=GeneID:1174701;gbkey=misc_feature;gene=uvrY
NC_003143.1	RefSeq	gene	2112426	2114279	.	+	.	ID=gene1810;Name=uvrC;Dbxref=GeneID:1174702;gbkey=Gene;gene=uvrC;locus_tag=YPO1866
NC_003143.1	RefSeq	CDS	2112426	2114279	.	+	0	ID=cds1732;Name=YP_002346860.1;Parent=gene1810;Note=The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5%27 and 3%27 sides of the lesion. The N-terminal half is responsible for the 3%27 incision and the C-terminal half is responsible for the 5%27 incision;Dbxref=InterPro:IPR000305,InterPro:IPR000445,InterPro:IPR001162,InterPro:IPR001943,InterPro:IPR003583,InterPro:IPR004791,InterPro:IPR009055,InterPro:IPR010994,UniProtKB%2FTrEMBL:Q0WFS8,Genbank:YP_002346860.1,GeneID:1174702;gbkey=CDS;gene=uvrC;product=excinuclease ABC subunit C;protein_id=YP_002346860.1;transl_table=11
NC_003143.1	RefSeq	region	2113434	2113481	.	+	.	ID=id1267;Note=PS00216 Sugar transport proteins signature 1.;Dbxref=GeneID:1174702;gbkey=misc_feature;gene=uvrC
NC_003143.1	RefSeq	gene	2114338	2114886	.	+	.	ID=gene1811;Name=pgsA;Dbxref=GeneID:1174703;gbkey=Gene;gene=pgsA;locus_tag=YPO1867
NC_003143.1	RefSeq	CDS	2114338	2114886	.	+	0	ID=cds1733;Name=YP_002346861.1;Parent=gene1811;Dbxref=InterPro:IPR000462,InterPro:IPR004570,UniProtKB%2FTrEMBL:Q0WFS7,Genbank:YP_002346861.1,GeneID:1174703;gbkey=CDS;gene=pgsA;product=phosphatidylglycerophosphate synthetase;protein_id=YP_002346861.1;transl_table=11
NC_003143.1	RefSeq	region	2114482	2114550	.	+	.	ID=id1268;Note=PS00379 CDP-alcohol phosphatidyltransferases signature.;Dbxref=GeneID:1174703;gbkey=misc_feature;gene=pgsA
NC_003143.1	RefSeq	gene	2115031	2115106	.	+	.	ID=gene1812;Name=YPt_23;Dbxref=GeneID:1174704;gbkey=Gene;locus_tag=YPt_23
NC_003143.1	RefSeq	tRNA	2115031	2115106	.	+	.	ID=rna36;Parent=gene1812;Note=tRNA Gly anticodon GCC%2C Cove score 93.74;Dbxref=GeneID:1174704;gbkey=tRNA;product=tRNA-Gly
NC_003143.1	RefSeq	exon	2115031	2115106	.	+	.	ID=id1269;Parent=rna36;Note=tRNA Gly anticodon GCC%2C Cove score 93.74;Dbxref=GeneID:1174704;gbkey=tRNA;product=tRNA-Gly
NC_003143.1	RefSeq	gene	2115159	2115232	.	+	.	ID=gene1813;Name=YPt_24;Dbxref=GeneID:1174705;gbkey=Gene;locus_tag=YPt_24
NC_003143.1	RefSeq	tRNA	2115159	2115232	.	+	.	ID=rna37;Parent=gene1813;Note=tRNA Cys anticodon GCA%2C Cove score 58.23;Dbxref=GeneID:1174705;gbkey=tRNA;product=tRNA-Cys
NC_003143.1	RefSeq	exon	2115159	2115232	.	+	.	ID=id1270;Parent=rna37;Note=tRNA Cys anticodon GCA%2C Cove score 58.23;Dbxref=GeneID:1174705;gbkey=tRNA;product=tRNA-Cys
NC_003143.1	RefSeq	gene	2115243	2115328	.	+	.	ID=gene1814;Name=YPt_25;Dbxref=GeneID:1174706;gbkey=Gene;locus_tag=YPt_25
NC_003143.1	RefSeq	tRNA	2115243	2115328	.	+	.	ID=rna38;Parent=gene1814;Note=tRNA Leu anticodon TAA%2C Cove score 73.10;Dbxref=GeneID:1174706;gbkey=tRNA;product=tRNA-Leu
NC_003143.1	RefSeq	exon	2115243	2115328	.	+	.	ID=id1271;Parent=rna38;Note=tRNA Leu anticodon TAA%2C Cove score 73.10;Dbxref=GeneID:1174706;gbkey=tRNA;product=tRNA-Leu
NC_003143.1	RefSeq	gene	2115626	2116141	.	-	.	ID=gene1815;Name=YPO1868;Dbxref=GeneID:1174707;gbkey=Gene;locus_tag=YPO1868
NC_003143.1	RefSeq	CDS	2115626	2116141	.	-	0	ID=cds1734;Name=YP_002346862.1;Parent=gene1815;Dbxref=InterPro:IPR011010,InterPro:IPR013762,UniProtKB%2FTrEMBL:Q0WFS6,Genbank:YP_002346862.1,GeneID:1174707;gbkey=CDS;product=hypothetical protein;protein_id=YP_002346862.1;transl_table=11
NC_003143.1	RefSeq	gene	2116848	2116994	.	+	.	ID=gene1816;Name=YPO1870;Dbxref=GeneID:1174709;gbkey=Gene;locus_tag=YPO1870
NC_003143.1	RefSeq	CDS	2116848	2116994	.	+	0	ID=cds1735;Name=YP_002346864.1;Parent=gene1816;Note=No significant database hits;Dbxref=UniProtKB%2FTrEMBL:Q74V13,Genbank:YP_002346864.1,GeneID:1174709;gbkey=CDS;product=hypothetical protein;protein_id=YP_002346864.1;transl_table=11
NC_003143.1	RefSeq	gene	2117239	2117412	.	+	.	ID=gene1817;Name=YPO1870a;Dbxref=GeneID:16744761;gbkey=Gene;locus_tag=YPO1870a
NC_003143.1	RefSeq	CDS	2117239	2117412	.	+	0	ID=cds1736;Name=YP_008479710.1;Parent=gene1817;Dbxref=Genbank:YP_008479710.1,GeneID:16744761;gbkey=CDS;product=hypothetical protein;protein_id=YP_008479710.1;transl_table=11
NC_003143.1	RefSeq	gene	2117850	2118347	.	-	.	ID=gene1818;Name=YPO1871;Dbxref=GeneID:1174710;gbkey=Gene;locus_tag=YPO1871;pseudo=true
NC_003143.1	RefSeq	gene	2118567	2119526	.	-	.	ID=gene1819;Name=tnpA;Dbxref=GeneID:1174712;gbkey=Gene;gene=tnpA;locus_tag=YPO1873
NC_003143.1	RefSeq	CDS	2118567	2119526	.	-	0	ID=cds1737;Name=YP_002346867.1;Parent=gene1819;Dbxref=InterPro:IPR001584,InterPro:IPR012337,UniProtKB%2FTrEMBL:Q7CI17,Genbank:YP_002346867.1,GeneID:1174712;gbkey=CDS;gene=tnpA;product=transposase;protein_id=YP_002346867.1;transl_table=11
NC_003143.1	RefSeq	gene	2119598	2120044	.	-	.	ID=gene1820;Name=YPO1874;Dbxref=GeneID:1174713;gbkey=Gene;locus_tag=YPO1874
NC_003143.1	RefSeq	CDS	2119598	2120044	.	-	0	ID=cds1738;Name=YP_002346868.1;Parent=gene1820;Dbxref=InterPro:IPR002514,UniProtKB%2FTrEMBL:Q7CI18,Genbank:YP_002346868.1,GeneID:1174713;gbkey=CDS;product=hypothetical protein;protein_id=YP_002346868.1;transl_table=11
NC_003143.1	RefSeq	region	2119952	2120017	.	-	.	ID=id1272;Note=Predicted helix-turn-helix motif with score 1957 %28%2B5.85 SD%29 at aa 10-31%2C sequence MTVTAVAQMEGISEATLYNWRN;Dbxref=GeneID:1174713;gbkey=misc_feature
NC_003143.1	RefSeq	gene	2120433	2120687	.	-	.	ID=gene1821;Name=YPO1876;Dbxref=GeneID:1174715;gbkey=Gene;locus_tag=YPO1876
NC_003143.1	RefSeq	CDS	2120433	2120687	.	-	0	ID=cds1739;Name=YP_002346870.1;Parent=gene1821;Dbxref=UniProtKB%2FTrEMBL:Q74V19,Genbank:YP_002346870.1,GeneID:1174715;gbkey=CDS;product=hypothetical protein;protein_id=YP_002346870.1;transl_table=11
NC_003143.1	RefSeq	gene	2120692	2121209	.	-	.	ID=gene1822;Name=YPO1877;Dbxref=GeneID:1174716;gbkey=Gene;locus_tag=YPO1877;pseudo=true
NC_003143.1	RefSeq	region	2121123	2121188	.	-	.	ID=id1273;Note=1 probable transmembrane helix predicted;Dbxref=GeneID:1174716;gbkey=misc_feature
NC_003143.1	RefSeq	gene	2121644	2121931	.	-	.	ID=gene1823;Name=YPO1879;Dbxref=GeneID:1174718;gbkey=Gene;locus_tag=YPO1879
NC_003143.1	RefSeq	CDS	2121644	2121931	.	-	0	ID=cds1740;Name=YP_002346873.1;Parent=gene1823;Dbxref=UniProtKB%2FTrEMBL:Q7CI21,Genbank:YP_002346873.1,GeneID:1174718;gbkey=CDS;product=hypothetical protein;protein_id=YP_002346873.1;transl_table=11
NC_003143.1	RefSeq	gene	2121948	2122247	.	-	.	ID=gene1824;Name=YPO1880;Dbxref=GeneID:1174719;gbkey=Gene;locus_tag=YPO1880
NC_003143.1	RefSeq	CDS	2121948	2122247	.	-	0	ID=cds1741;Name=YP_002346874.1;Parent=gene1824;Dbxref=InterPro:IPR007048,UniProtKB%2FTrEMBL:Q74V23,Genbank:YP_002346874.1,GeneID:1174719;gbkey=CDS;product=hypothetical protein;protein_id=YP_002346874.1;transl_table=11
NC_003143.1	RefSeq	gene	2122244	2122603	.	-	.	ID=gene1825;Name=YPO1881;Dbxref=GeneID:1174720;gbkey=Gene;locus_tag=YPO1881
NC_003143.1	RefSeq	CDS	2122244	2122603	.	-	0	ID=cds1742;Name=YP_002346875.1;Parent=gene1825;Dbxref=InterPro:IPR006531,UniProtKB%2FTrEMBL:Q7CI22,Genbank:YP_002346875.1,GeneID:1174720;gbkey=CDS;product=hypothetical protein;protein_id=YP_002346875.1;transl_table=11
NC_003143.1	RefSeq	gene	2122887	2123177	.	+	.	ID=gene1826;Name=YPO1882;Dbxref=GeneID:1174721;gbkey=Gene;locus_tag=YPO1882
NC_003143.1	RefSeq	CDS	2122887	2123177	.	+	0	ID=cds1743;Name=YP_002346876.1;Parent=gene1826;Dbxref=UniProtKB%2FTrEMBL:Q7CI23,Genbank:YP_002346876.1,GeneID:1174721;gbkey=CDS;product=hypothetical protein;protein_id=YP_002346876.1;transl_table=11
NC_003143.1	RefSeq	gene	2123243	2124319	.	+	.	ID=gene1827;Name=YPO1883;Dbxref=GeneID:1174722;gbkey=Gene;locus_tag=YPO1883
NC_003143.1	RefSeq	CDS	2123243	2124319	.	+	0	ID=cds1744;Name=YP_008479711.1;Parent=gene1827;Dbxref=Genbank:YP_008479711.1,GeneID:1174722;gbkey=CDS;product=hypothetical protein;protein_id=YP_008479711.1;transl_table=11
NC_003143.1	RefSeq	repeat_region	2124296	2125600	.	+	.	ID=id1274;Note=insertion sequence:IS285;gbkey=repeat_region
NC_003143.1	RefSeq	gene	2124367	2125565	.	+	.	ID=gene1828;Name=y1062;Dbxref=GeneID:1174723;gbkey=Gene;gene=y1062;gene_synonym=ypmt1.80C;locus_tag=YPO1884;pseudo=true
NC_003143.1	RefSeq	region	2125060	2125134	.	+	.	ID=id1275;Note=PS01007 Transposases%2C Mutator family%2C signature.;Dbxref=GeneID:1174723;gbkey=misc_feature;gene=y1062
NC_003143.1	RefSeq	gene	2125983	2126552	.	-	.	ID=gene1829;Name=YPO1886;Dbxref=GeneID:1174724;gbkey=Gene;locus_tag=YPO1886
NC_003143.1	RefSeq	CDS	2125983	2126552	.	-	0	ID=cds1745;Name=YP_002346877.1;Parent=gene1829;Dbxref=UniProtKB%2FTrEMBL:Q7CI24,Genbank:YP_002346877.1,GeneID:1174724;gbkey=CDS;product=hypothetical protein;protein_id=YP_002346877.1;transl_table=11
NC_003143.1	RefSeq	gene	2126564	2126998	.	-	.	ID=gene1830;Name=YPO1887;Dbxref=GeneID:1174725;gbkey=Gene;locus_tag=YPO1887
NC_003143.1	RefSeq	CDS	2126564	2126998	.	-	0	ID=cds1746;Name=YP_002346878.1;Parent=gene1830;Dbxref=UniProtKB%2FTrEMBL:Q7CI25,Genbank:YP_002346878.1,GeneID:1174725;gbkey=CDS;product=hypothetical protein;protein_id=YP_002346878.1;transl_table=11
NC_003143.1	RefSeq	gene	2127967	2128764	.	+	.	ID=gene1831;Name=YPO1890;Dbxref=GeneID:1174728;gbkey=Gene;locus_tag=YPO1890
NC_003143.1	RefSeq	CDS	2127967	2128764	.	+	0	ID=cds1747;Name=YP_002346880.1;Parent=gene1831;Dbxref=InterPro:IPR000524,InterPro:IPR011663,UniProtKB%2FTrEMBL:Q7CI26,Genbank:YP_002346880.1,GeneID:1174728;gbkey=CDS;product=GntR family transcriptional regulator;protein_id=YP_002346880.1;transl_table=11
NC_003143.1	RefSeq	region	2128129	2128203	.	+	.	ID=id1276;Note=PS00043 Bacterial regulatory proteins%2C gntR family signature.;Dbxref=GeneID:1174728;gbkey=misc_feature
NC_003143.1	RefSeq	region	2128132	2128197	.	+	.	ID=id1277;Note=Predicted helix-turn-helix motif with score 1651 %28%2B4.81 SD%29 at aa 56-77%2C sequence PSERELSERLNLSRVTVRRALS;Dbxref=GeneID:1174728;gbkey=misc_feature
NC_003143.1	RefSeq	gene	2129432	2130445	.	+	.	ID=gene1832;Name=YPO1892;Dbxref=GeneID:1174730;gbkey=Gene;locus_tag=YPO1892
NC_003143.1	RefSeq	CDS	2129432	2130445	.	+	0	ID=cds1748;Name=YP_002346882.1;Parent=gene1832;Dbxref=InterPro:IPR000683,InterPro:IPR004104,UniProtKB%2FTrEMBL:Q7CI27,Genbank:YP_002346882.1,GeneID:1174730;gbkey=CDS;product=oxidoreductase;protein_id=YP_002346882.1;transl_table=11
NC_003143.1	RefSeq	gene	2130475	2131743	.	+	.	ID=gene1833;Name=YPO1893;Dbxref=GeneID:1174731;gbkey=Gene;locus_tag=YPO1893
NC_003143.1	RefSeq	CDS	2130475	2131743	.	+	0	ID=cds1749;Name=YP_002346883.1;Parent=gene1833;Dbxref=InterPro:IPR006059,UniProtKB%2FTrEMBL:Q9ZC22,Genbank:YP_002346883.1,GeneID:1174731;gbkey=CDS;product=exported solute-binding protein;protein_id=YP_002346883.1;transl_table=11
NC_003143.1	RefSeq	gene	2131810	2132670	.	+	.	ID=gene1834;Name=YPO1894;Dbxref=GeneID:1174732;gbkey=Gene;locus_tag=YPO1894
NC_003143.1	RefSeq	CDS	2131810	2132670	.	+	0	ID=cds1750;Name=YP_002346884.1;Parent=gene1834;Dbxref=InterPro:IPR000515,UniProtKB%2FTrEMBL:Q9ZC23,Genbank:YP_002346884.1,GeneID:1174732;gbkey=CDS;product=binding-protein-dependent transporter inner membrane component;protein_id=YP_002346884.1;transl_table=11
NC_003143.1	RefSeq	region	2132335	2132421	.	+	.	ID=id1278;Note=PS00402 Binding-protein-dependent transport systems inner membrane comp. sign.;Dbxref=GeneID:1174732;gbkey=misc_feature
NC_003143.1	RefSeq	gene	2132663	2133490	.	+	.	ID=gene1835;Name=YPO1895;Dbxref=GeneID:1174733;gbkey=Gene;locus_tag=YPO1895
NC_003143.1	RefSeq	CDS	2132663	2133490	.	+	0	ID=cds1751;Name=YP_002346885.1;Parent=gene1835;Dbxref=InterPro:IPR000515,UniProtKB%2FTrEMBL:Q9ZC24,Genbank:YP_002346885.1,GeneID:1174733;gbkey=CDS;product=binding-protein-dependent transporter inner membrane component;protein_id=YP_002346885.1;transl_table=11
NC_003143.1	RefSeq	region	2133146	2133232	.	+	.	ID=id1279;Note=PS00402 Binding-protein-dependent transport systems inner membrane comp. sign.;Dbxref=GeneID:1174733;gbkey=misc_feature
NC_003143.1	RefSeq	gene	2133515	2134632	.	+	.	ID=gene1836;Name=YPO1896;Dbxref=GeneID:1174734;gbkey=Gene;locus_tag=YPO1896;pseudo=true
NC_003143.1	RefSeq	region	2133620	2133643	.	+	.	ID=id1280;Note=PS00017 ATP%2FGTP-binding site motif A %28P-loop%29.;Dbxref=GeneID:1174734;gbkey=misc_feature
NC_003143.1	RefSeq	region	2133914	2133958	.	+	.	ID=id1281;Note=PS00211 ABC transporters family signature.;Dbxref=GeneID:1174734;gbkey=misc_feature
NC_003143.1	RefSeq	gene	2134882	2135067	.	-	.	ID=gene1837;Name=YPO1898;Dbxref=GeneID:1174736;gbkey=Gene;locus_tag=YPO1898
NC_003143.1	RefSeq	CDS	2134882	2135067	.	-	0	ID=cds1752;Name=YP_002346888.1;Parent=gene1837;Dbxref=UniProtKB%2FTrEMBL:Q74V39,Genbank:YP_002346888.1,GeneID:1174736;gbkey=CDS;product=hypothetical protein;protein_id=YP_002346888.1;transl_table=11
NC_003143.1	RefSeq	repeat_region	2134922	2134946	.	+	.	ID=id1282;Note=imperfect 24 bp direct repeat flanking the pathogenicity island YP-HPI;gbkey=repeat_region
NC_003143.1	RefSeq	region	2134947	2171283	.	+	.	ID=id1283;Note=Pathogenicity island YP-HPI;gbkey=misc_feature
NC_003143.1	RefSeq	repeat_region	2135459	2137412	.	+	.	ID=id1284;Note=insertion sequence:IS100;gbkey=repeat_region
NC_003143.1	RefSeq	repeat_region	2135459	2135486	.	+	.	ID=id1285;Note=IS100 inverted repeat;gbkey=repeat_region
NC_003143.1	RefSeq	gene	2135545	2136567	.	+	.	ID=gene1838;Name=y1093;Dbxref=GeneID:1174738;gbkey=Gene;gene=y1093;gene_synonym=ypmt1;locus_tag=YPO1900
NC_003143.1	RefSeq	CDS	2135545	2136567	.	+	0	ID=cds1753;Name=YP_002346890.1;Parent=gene1838;Dbxref=InterPro:IPR001584,InterPro:IPR006120,InterPro:IPR009057,InterPro:IPR012287,InterPro:IPR012337,UniProtKB%2FTrEMBL:Q7ARN5,Genbank:YP_002346890.1,GeneID:1174738;gbkey=CDS;gene=y1093;product=transposase for insertion sequence IS100;protein_id=YP_002346890.1;transl_table=11
NC_003143.1	RefSeq	region	2135596	2135661	.	+	.	ID=id1286;Note=Predicted helix-turn-helix motif with score 2147 %28%2B6.50 SD%29 at aa 18-39%2C sequence MSSRAIARELGISRNTVKRYLQ;Dbxref=GeneID:1174738;gbkey=misc_feature;gene=y1093
NC_003143.1	RefSeq	gene	2136564	2137346	.	+	.	ID=gene1839;Name=YPO1901;Note=ypmt1.57c;Dbxref=GeneID:1174739;gbkey=Gene;locus_tag=YPO1901
NC_003143.1	RefSeq	CDS	2136564	2137346	.	+	0	ID=cds1754;Name=YP_002346891.1;Parent=gene1839;Dbxref=InterPro:IPR001270,InterPro:IPR002611,InterPro:IPR003593,UniProtKB%2FTrEMBL:Q7ARK4,Genbank:YP_002346891.1,GeneID:1174739;gbkey=CDS;product=transposase%2FIS protein;protein_id=YP_002346891.1;transl_table=11
NC_003143.1	RefSeq	region	2136891	2136914	.	+	.	ID=id1287;Note=PS00017 ATP%2FGTP-binding site motif A %28P-loop%29.;Dbxref=GeneID:1174739;gbkey=misc_feature
NC_003143.1	RefSeq	repeat_region	2137385	2137412	.	-	.	ID=id1288;Note=IS100 inverted repeat;gbkey=repeat_region
NC_003143.1	RefSeq	gene	2137945	2138526	.	-	.	ID=gene1840;Name=YPO1902;Dbxref=GeneID:1174740;gbkey=Gene;locus_tag=YPO1902
NC_003143.1	RefSeq	CDS	2137945	2138526	.	-	0	ID=cds1755;Name=YP_002346892.1;Parent=gene1840;Dbxref=UniProtKB%2FTrEMBL:Q9Z381,Genbank:YP_002346892.1,GeneID:1174740;gbkey=CDS;product=hypothetical protein;protein_id=YP_002346892.1;transl_table=11
NC_003143.1	RefSeq	gene	2138532	2138696	.	-	.	ID=gene1841;Name=YPO1903;Dbxref=GeneID:1174741;gbkey=Gene;locus_tag=YPO1903
NC_003143.1	RefSeq	CDS	2138532	2138696	.	-	0	ID=cds1756;Name=YP_002346893.1;Parent=gene1841;Dbxref=UniProtKB%2FTrEMBL:Q9ZFZ7,Genbank:YP_002346893.1,GeneID:1174741;gbkey=CDS;product=hypothetical protein;protein_id=YP_002346893.1;transl_table=11
NC_003143.1	RefSeq	gene	2138715	2138900	.	-	.	ID=gene1842;Name=YPO1904;Dbxref=GeneID:1174742;gbkey=Gene;locus_tag=YPO1904
NC_003143.1	RefSeq	CDS	2138715	2138900	.	-	0	ID=cds1757;Name=YP_002346894.2;Parent=gene1842;Dbxref=InterPro:IPR010260,UniProtKB%2FTrEMBL:Q9ZFZ8,Genbank:YP_002346894.2,GeneID:1174742;gbkey=CDS;product=transcriptional regulator;protein_id=YP_002346894.2;transl_table=11
NC_003143.1	RefSeq	region	2138817	2138882	.	-	.	ID=id1289;Note=Predicted helix-turn-helix motif with score 1251 %28%2B3.45 SD%29 at aa 39-60%2C sequence LRLRQVEQKTGLKRSQIYLYMK;Dbxref=GeneID:1174742;gbkey=misc_feature
NC_003143.1	RefSeq	gene	2139040	2139967	.	-	.	ID=gene1843;Name=YPO1905;Dbxref=GeneID:1174743;gbkey=Gene;locus_tag=YPO1905;pseudo=true
NC_003143.1	RefSeq	gene	2140840	2142861	.	-	.	ID=gene1844;Name=fyuA;Dbxref=GeneID:1174745;gbkey=Gene;gene=fyuA;gene_synonym=psn;locus_tag=YPO1906
NC_003143.1	RefSeq	CDS	2140840	2142861	.	-	0	ID=cds1758;Name=YP_002346897.1;Parent=gene1844;Dbxref=InterPro:IPR000531,InterPro:IPR010105,InterPro:IPR010916,InterPro:IPR010917,InterPro:IPR012910,UniProtKB%2FTrEMBL:Q0WFP1,Genbank:YP_002346897.1,GeneID:1174745;gbkey=CDS;gene=fyuA;product=pesticin%2Fyersiniabactin receptor protein;protein_id=YP_002346897.1;transl_table=11
NC_003143.1	RefSeq	gene	2142992	2144569	.	-	.	ID=gene1845;Name=irp5;Dbxref=GeneID:1174746;gbkey=Gene;gene=irp5;gene_synonym=ybtE;locus_tag=YPO1907
NC_003143.1	RefSeq	CDS	2142992	2144569	.	-	0	ID=cds1759;Name=YP_002346898.1;Parent=gene1845;Dbxref=InterPro:IPR000873,UniProtKB%2FTrEMBL:Q56950,Genbank:YP_002346898.1,GeneID:1174746;gbkey=CDS;gene=irp5;product=yersiniabactin siderophore biosynthetic protein;protein_id=YP_002346898.1;transl_table=11
NC_003143.1	RefSeq	region	2143346	2143387	.	-	.	ID=id1290;Note=PS00761 Signal peptidases I signature 3.;Dbxref=GeneID:1174746;gbkey=misc_feature;gene=irp5
NC_003143.1	RefSeq	region	2143919	2143984	.	-	.	ID=id1291;Note=Predicted helix-turn-helix motif with score 1075 %28%2B2.85 SD%29 at aa 196-217%2C sequence YNFSASAELCGISQQSVYLAVL;Dbxref=GeneID:1174746;gbkey=misc_feature;gene=irp5
NC_003143.1	RefSeq	region	2144015	2144050	.	-	.	ID=id1292;Note=PS00455  AMP-binding domain signature.;Dbxref=GeneID:1174746;gbkey=misc_feature;gene=irp5
NC_003143.1	RefSeq	gene	2144573	2145376	.	-	.	ID=gene1846;Name=irp4;Dbxref=GeneID:1174747;gbkey=Gene;gene=irp4;gene_synonym=ybtT;locus_tag=YPO1908
NC_003143.1	RefSeq	CDS	2144573	2145376	.	-	0	ID=cds1760;Name=YP_002346899.1;Parent=gene1846;Dbxref=InterPro:IPR001031,InterPro:IPR002016,InterPro:IPR012223,UniProtKB%2FTrEMBL:Q56949,Genbank:YP_002346899.1,GeneID:1174747;gbkey=CDS;gene=irp4;product=yersiniabactin biosynthetic protein YbtT;protein_id=YP_002346899.1;transl_table=11
NC_003143.1	RefSeq	region	2145092	2145124	.	-	.	ID=id1293;Note=PS00435 Peroxidases proximal heme-ligand signature.;Dbxref=GeneID:1174747;gbkey=misc_feature;gene=irp4
NC_003143.1	RefSeq	gene	2145373	2146473	.	-	.	ID=gene1847;Name=irp3;Dbxref=GeneID:1174748;gbkey=Gene;gene=irp3;gene_synonym=ybtU;locus_tag=YPO1909
NC_003143.1	RefSeq	CDS	2145373	2146473	.	-	0	ID=cds1761;Name=YP_002346900.1;Parent=gene1847;Dbxref=InterPro:IPR000683,InterPro:IPR010091,UniProtKB%2FTrEMBL:Q0WFN8,Genbank:YP_002346900.1,GeneID:1174748;gbkey=CDS;gene=irp3;product=yersiniabactin biosynthetic protein YbtU;protein_id=YP_002346900.1;transl_table=11
NC_003143.1	RefSeq	gene	2146470	2155961	.	-	.	ID=gene1848;Name=irp1;Dbxref=GeneID:1174749;gbkey=Gene;gene=irp1;locus_tag=YPO1910
NC_003143.1	RefSeq	CDS	2146470	2155961	.	-	0	ID=cds1762;Name=YP_002346901.1;Parent=gene1848;Dbxref=InterPro:IPR000794,InterPro:IPR001031,InterPro:IPR001227,InterPro:IPR001242,InterPro:IPR002198,InterPro:IPR006162,InterPro:IPR006163,InterPro:IPR009081,InterPro:IPR013217,InterPro:IPR013624,UniProtKB%2FTrEMBL:Q9Z373,Genbank:YP_002346901.1,GeneID:1174749;gbkey=CDS;gene=irp1;product=yersiniabactin biosynthetic protein;protein_id=YP_002346901.1;transl_table=11
NC_003143.1	RefSeq	region	2147358	2147405	.	-	.	ID=id1294;Note=PS00012 Phosphopantetheine attachment site.;Dbxref=GeneID:1174749;gbkey=misc_feature;gene=irp1
NC_003143.1	RefSeq	region	2150373	2150420	.	-	.	ID=id1295;Note=PS00012 Phosphopantetheine attachment site.;Dbxref=GeneID:1174749;gbkey=misc_feature;gene=irp1
NC_003143.1	RefSeq	region	2155131	2155187	.	-	.	ID=id1296;Note=PS00095 C-5 cytosine-specific DNA methylases C-terminal signature.;Dbxref=GeneID:1174749;gbkey=misc_feature;gene=irp1
NC_003143.1	RefSeq	region	2155347	2155397	.	-	.	ID=id1297;Note=PS00606 Beta-ketoacyl synthases active site.;Dbxref=GeneID:1174749;gbkey=misc_feature;gene=irp1
NC_003143.1	RefSeq	gene	2156049	2162156	.	-	.	ID=gene1849;Name=irp2;Dbxref=GeneID:1174750;gbkey=Gene;gene=irp2;locus_tag=YPO1911
NC_003143.1	RefSeq	CDS	2156049	2162156	.	-	0	ID=cds1763;Name=YP_002346902.1;Parent=gene1849;Dbxref=InterPro:IPR000873,InterPro:IPR001242,InterPro:IPR002047,InterPro:IPR006162,InterPro:IPR006163,InterPro:IPR009081,InterPro:IPR010071,InterPro:IPR013217,InterPro:IPR013624,UniProtKB%2FTrEMBL:Q7CI41,Genbank:YP_002346902.1,GeneID:1174750;gbkey=CDS;gene=irp2;product=yersiniabactin biosynthetic protein;protein_id=YP_002346902.1;transl_table=11
NC_003143.1	RefSeq	region	2159997	2160032	.	-	.	ID=id1298;Note=PS00455  AMP-binding domain signature.;Dbxref=GeneID:1174750;gbkey=misc_feature;gene=irp2
NC_003143.1	RefSeq	region	2160870	2160893	.	-	.	ID=id1299;Note=PS00256 Adipokinetic hormone family signature.;Dbxref=GeneID:1174750;gbkey=misc_feature;gene=irp2
NC_003143.1	RefSeq	region	2161971	2162018	.	-	.	ID=id1300;Note=PS00012 Phosphopantetheine attachment site.;Dbxref=GeneID:1174750;gbkey=misc_feature;gene=irp2
NC_003143.1	RefSeq	gene	2162347	2163306	.	-	.	ID=gene1850;Name=ybtA;Dbxref=GeneID:1174751;gbkey=Gene;gene=ybtA;locus_tag=YPO1912
NC_003143.1	RefSeq	CDS	2162347	2163306	.	-	0	ID=cds1764;Name=YP_002346903.1;Parent=gene1850;Dbxref=InterPro:IPR000005,InterPro:IPR009057,InterPro:IPR012287,UniProtKB%2FTrEMBL:Q56951,Genbank:YP_002346903.1,GeneID:1174751;gbkey=CDS;gene=ybtA;product=transcriptional regulator YbtA;protein_id=YP_002346903.1;transl_table=11
NC_003143.1	RefSeq	region	2162371	2162499	.	-	.	ID=id1301;Note=PS00041 Bacterial regulatory proteins%2C araC family signature.;Dbxref=GeneID:1174751;gbkey=misc_feature;gene=ybtA
NC_003143.1	RefSeq	gene	2163473	2165275	.	+	.	ID=gene1851;Name=irp6;Dbxref=GeneID:1174752;gbkey=Gene;gene=irp6;gene_synonym=ybtP;locus_tag=YPO1913
NC_003143.1	RefSeq	CDS	2163473	2165275	.	+	0	ID=cds1765;Name=YP_002346904.1;Parent=gene1851;Dbxref=InterPro:IPR001140,InterPro:IPR003439,InterPro:IPR003593,InterPro:IPR011527,UniProtKB%2FTrEMBL:Q9R7V3,Genbank:YP_002346904.1,GeneID:1174752;gbkey=CDS;gene=irp6;product=lipoprotein inner membrane ABC transporter;protein_id=YP_002346904.1;transl_table=11
NC_003143.1	RefSeq	region	2164601	2164624	.	+	.	ID=id1302;Note=PS00017 ATP%2FGTP-binding site motif A %28P-loop%29.;Dbxref=GeneID:1174752;gbkey=misc_feature;gene=irp6
NC_003143.1	RefSeq	region	2164913	2164957	.	+	.	ID=id1303;Note=PS00211 ABC transporters family signature.;Dbxref=GeneID:1174752;gbkey=misc_feature;gene=irp6
NC_003143.1	RefSeq	gene	2165262	2167064	.	+	.	ID=gene1852;Name=irp7;Dbxref=GeneID:1174753;gbkey=Gene;gene=irp7;gene_synonym=ybtQ;locus_tag=YPO1914
NC_003143.1	RefSeq	CDS	2165262	2167064	.	+	0	ID=cds1766;Name=YP_002346905.1;Parent=gene1852;Dbxref=InterPro:IPR003439,InterPro:IPR003593,InterPro:IPR011527,InterPro:IPR012337,UniProtKB%2FTrEMBL:Q9Z375,Genbank:YP_002346905.1,GeneID:1174753;gbkey=CDS;gene=irp7;product=ABC transporter permease;protein_id=YP_002346905.1;transl_table=11
NC_003143.1	RefSeq	region	2165379	2165411	.	+	.	ID=id1304;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site.;Dbxref=GeneID:1174753;gbkey=misc_feature;gene=irp7
NC_003143.1	RefSeq	region	2166393	2166416	.	+	.	ID=id1305;Note=PS00017 ATP%2FGTP-binding site motif A %28P-loop%29.;Dbxref=GeneID:1174753;gbkey=misc_feature;gene=irp7
NC_003143.1	RefSeq	region	2166705	2166749	.	+	.	ID=id1306;Note=PS00211 ABC transporters family signature.;Dbxref=GeneID:1174753;gbkey=misc_feature;gene=irp7
NC_003143.1	RefSeq	gene	2167057	2168337	.	+	.	ID=gene1853;Name=irp8;Dbxref=GeneID:1174754;gbkey=Gene;gene=irp8;gene_synonym=ybtX;locus_tag=YPO1915
NC_003143.1	RefSeq	CDS	2167057	2168337	.	+	0	ID=cds1767;Name=YP_002346906.1;Parent=gene1853;Dbxref=InterPro:IPR011701,UniProtKB%2FTrEMBL:Q0WFN2,Genbank:YP_002346906.1,GeneID:1174754;gbkey=CDS;gene=irp8;product=signal transducer;protein_id=YP_002346906.1;transl_table=11
NC_003143.1	RefSeq	region	2168053	2168085	.	+	.	ID=id1307;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site.;Dbxref=GeneID:1174754;gbkey=misc_feature;gene=irp8
NC_003143.1	RefSeq	gene	2168365	2169669	.	+	.	ID=gene1854;Name=ybtS;Dbxref=GeneID:1174755;gbkey=Gene;gene=ybtS;locus_tag=YPO1916
NC_003143.1	RefSeq	CDS	2168365	2169669	.	+	0	ID=cds1768;Name=YP_002346907.1;Parent=gene1854;Note=catalyzes the conversion of chorismate to salicylate in the biosynthesis of the siderophore yersiniabactin;Dbxref=InterPro:IPR005801,UniProtKB%2FTrEMBL:Q9Z396,Genbank:YP_002346907.1,GeneID:1174755;gbkey=CDS;gene=ybtS;product=salicylate synthase Irp9;protein_id=YP_002346907.1;transl_table=11
NC_003143.1	RefSeq	gene	2169863	2171125	.	-	.	ID=gene1855;Name=int;Dbxref=GeneID:1174756;gbkey=Gene;gene=int;locus_tag=YPO1917
NC_003143.1	RefSeq	CDS	2169863	2171125	.	-	0	ID=cds1769;Name=YP_002346908.1;Parent=gene1855;Dbxref=InterPro:IPR002104,InterPro:IPR011010,InterPro:IPR013762,UniProtKB%2FTrEMBL:Q9Z3B4,Genbank:YP_002346908.1,GeneID:1174756;gbkey=CDS;gene=int;product=integrase;protein_id=YP_002346908.1;transl_table=11
NC_003143.1	RefSeq	repeat_region	2171284	2171307	.	+	.	ID=id1308;Note=imperfect 24 bp direct repeat flanking the pathogenicity island YP-HPI;gbkey=repeat_region
NC_003143.1	RefSeq	gene	2171287	2171362	.	-	.	ID=gene1856;Name=YPt_26;Dbxref=GeneID:1174757;gbkey=Gene;locus_tag=YPt_26
NC_003143.1	RefSeq	tRNA	2171287	2171362	.	-	.	ID=rna39;Parent=gene1856;Note=tRNA Asn anticodon GTT%2C Cove score 87.13;Dbxref=GeneID:1174757;gbkey=tRNA;product=tRNA-Asn
NC_003143.1	RefSeq	exon	2171287	2171362	.	-	.	ID=id1309;Parent=rna39;Note=tRNA Asn anticodon GTT%2C Cove score 87.13;Dbxref=GeneID:1174757;gbkey=tRNA;product=tRNA-Asn
NC_003143.1	RefSeq	gene	2171665	2172405	.	-	.	ID=gene1857;Name=YPO1918;Dbxref=GeneID:1174758;gbkey=Gene;locus_tag=YPO1918
NC_003143.1	RefSeq	CDS	2171665	2172405	.	-	0	ID=cds1770;Name=YP_002346909.1;Parent=gene1857;Dbxref=InterPro:IPR001829,InterPro:IPR008962,UniProtKB%2FTrEMBL:Q9Z394,Genbank:YP_002346909.1,GeneID:1174758;gbkey=CDS;product=pili assembly chaperone;protein_id=YP_002346909.1;transl_table=11
NC_003143.1	RefSeq	gene	2172402	2173751	.	-	.	ID=gene1858;Name=YPO1919;Dbxref=GeneID:1174759;gbkey=Gene;locus_tag=YPO1919
NC_003143.1	RefSeq	CDS	2172402	2173751	.	-	0	ID=cds1771;Name=YP_002346910.1;Parent=gene1858;Dbxref=InterPro:IPR000259,InterPro:IPR008966,InterPro:IPR011228,UniProtKB%2FTrEMBL:Q9ZC29,Genbank:YP_002346910.1,GeneID:1174759;gbkey=CDS;product=hypothetical protein;protein_id=YP_002346910.1;transl_table=11
NC_003143.1	RefSeq	gene	2173767	2176358	.	-	.	ID=gene1859;Name=YPO1920;Dbxref=GeneID:1174760;gbkey=Gene;locus_tag=YPO1920
NC_003143.1	RefSeq	CDS	2173767	2176358	.	-	0	ID=cds1772;Name=YP_002346911.1;Parent=gene1859;Dbxref=InterPro:IPR000015,UniProtKB%2FTrEMBL:Q9ZC30,Genbank:YP_002346911.1,GeneID:1174760;gbkey=CDS;product=fimbrial usher protein;protein_id=YP_002346911.1;transl_table=11
NC_003143.1	RefSeq	gene	2176407	2177051	.	-	.	ID=gene1860;Name=YPO1921;Dbxref=GeneID:1174761;gbkey=Gene;locus_tag=YPO1921
NC_003143.1	RefSeq	CDS	2176407	2177051	.	-	0	ID=cds1773;Name=YP_002346912.1;Parent=gene1860;Dbxref=InterPro:IPR001829,InterPro:IPR008962,UniProtKB%2FTrEMBL:Q9ZC31,Genbank:YP_002346912.1,GeneID:1174761;gbkey=CDS;product=pili assembly chaperone;protein_id=YP_002346912.1;transl_table=11
NC_003143.1	RefSeq	gene	2177144	2177674	.	-	.	ID=gene1861;Name=YPO1922;Dbxref=GeneID:1174762;gbkey=Gene;locus_tag=YPO1922
NC_003143.1	RefSeq	CDS	2177144	2177674	.	-	0	ID=cds1774;Name=YP_002346913.1;Parent=gene1861;Dbxref=InterPro:IPR000259,InterPro:IPR008966,UniProtKB%2FTrEMBL:Q9ZC32,Genbank:YP_002346913.1,GeneID:1174762;gbkey=CDS;product=fimbrial protein;protein_id=YP_002346913.1;transl_table=11
NC_003143.1	RefSeq	gene	2178187	2181914	.	-	.	ID=gene1862;Name=YPO1923;Dbxref=GeneID:1174763;gbkey=Gene;locus_tag=YPO1923;pseudo=true
NC_003143.1	RefSeq	region	2180278	2180343	.	-	.	ID=id1310;Note=1 probable transmembrane helix predicted;Dbxref=GeneID:1174763;gbkey=misc_feature
NC_003143.1	RefSeq	gene	2182012	2182644	.	-	.	ID=gene1863;Name=YPO1925;Dbxref=GeneID:1174764;gbkey=Gene;locus_tag=YPO1925
NC_003143.1	RefSeq	CDS	2182012	2182644	.	-	0	ID=cds1775;Name=YP_002346914.1;Parent=gene1863;Dbxref=InterPro:IPR000792,InterPro:IPR001789,InterPro:IPR011006,InterPro:IPR011991,UniProtKB%2FTrEMBL:Q9ZC35,Genbank:YP_002346914.1,GeneID:1174764;gbkey=CDS;product=two-component response regulator;protein_id=YP_002346914.1;transl_table=11
NC_003143.1	RefSeq	region	2182072	2182155	.	-	.	ID=id1311;Note=PS00622 Bacterial regulatory proteins%2C luxR family signature.;Dbxref=GeneID:1174764;gbkey=misc_feature
NC_003143.1	RefSeq	region	2182087	2182152	.	-	.	ID=id1312;Note=Predicted helix-turn-helix motif with score 1245 %28%2B3.43 SD%29 at aa 165-186%2C sequence LSNKQIADEMFISNKTVSTYKT;Dbxref=GeneID:1174764;gbkey=misc_feature
NC_003143.1	RefSeq	gene	2183470	2184792	.	-	.	ID=gene1864;Name=YPO1926;Dbxref=GeneID:1174765;gbkey=Gene;locus_tag=YPO1926
NC_003143.1	RefSeq	CDS	2183470	2184792	.	-	0	ID=cds1776;Name=YP_002346915.1;Parent=gene1864;Dbxref=InterPro:IPR003702,UniProtKB%2FTrEMBL:Q9ZC36,Genbank:YP_002346915.1,GeneID:1174765;gbkey=CDS;product=4-hydroxybutyrate CoA-transferase;protein_id=YP_002346915.1;transl_table=11
NC_003143.1	RefSeq	gene	2184815	2185357	.	-	.	ID=gene1865;Name=YPO1927;Dbxref=GeneID:1174766;gbkey=Gene;locus_tag=YPO1927
NC_003143.1	RefSeq	CDS	2184815	2185357	.	-	0	ID=cds1777;Name=YP_002346916.1;Parent=gene1865;Dbxref=InterPro:IPR002539,UniProtKB%2FTrEMBL:Q9ZC37,Genbank:YP_002346916.1,GeneID:1174766;gbkey=CDS;product=transcription regulatory protein;protein_id=YP_002346916.1;transl_table=11
NC_003143.1	RefSeq	gene	2185407	2186249	.	-	.	ID=gene1866;Name=YPO1928;Dbxref=GeneID:1174767;gbkey=Gene;locus_tag=YPO1928
NC_003143.1	RefSeq	CDS	2185407	2186249	.	-	0	ID=cds1778;Name=YP_002346917.1;Parent=gene1866;Dbxref=InterPro:IPR005000,InterPro:IPR011076,InterPro:IPR011206,UniProtKB%2FTrEMBL:Q9ZC38,Genbank:YP_002346917.1,GeneID:1174767;gbkey=CDS;product=citrate lyase subunit beta;protein_id=YP_002346917.1;transl_table=11
NC_003143.1	RefSeq	gene	2186344	2187222	.	+	.	ID=gene1867;Name=YPO1929;Dbxref=GeneID:1174768;gbkey=Gene;locus_tag=YPO1929
NC_003143.1	RefSeq	CDS	2186344	2187222	.	+	0	ID=cds1779;Name=YP_002346918.1;Parent=gene1867;Dbxref=InterPro:IPR000847,InterPro:IPR005119,InterPro:IPR011991,UniProtKB%2FTrEMBL:Q0WFM0,Genbank:YP_002346918.1,GeneID:1174768;gbkey=CDS;product=LysR family transcriptional regulator;protein_id=YP_002346918.1;transl_table=11
NC_003143.1	RefSeq	region	2186389	2186454	.	+	.	ID=id1313;Note=Predicted helix-turn-helix motif with score 1576 %28%2B4.55 SD%29 at aa 16-37%2C sequence RHFTRAAARLGIGQPPLSQQIK;Dbxref=GeneID:1174768;gbkey=misc_feature
NC_003143.1	RefSeq	gene	2187297	2187770	.	-	.	ID=gene1868;Name=YPO1930;Dbxref=GeneID:1174769;gbkey=Gene;locus_tag=YPO1930
NC_003143.1	RefSeq	CDS	2187297	2187770	.	-	0	ID=cds1780;Name=YP_002346919.1;Parent=gene1868;Dbxref=InterPro:IPR013784,UniProtKB%2FTrEMBL:Q9ZC40,Genbank:YP_002346919.1,GeneID:1174769;gbkey=CDS;product=lipoprotein;protein_id=YP_002346919.1;transl_table=11
NC_003143.1	RefSeq	region	2187690	2187722	.	-	.	ID=id1314;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site.;Dbxref=GeneID:1174769;gbkey=misc_feature
NC_003143.1	RefSeq	gene	2187795	2188355	.	-	.	ID=gene1869;Name=YPO1931;Dbxref=GeneID:1174770;gbkey=Gene;locus_tag=YPO1931
NC_003143.1	RefSeq	CDS	2187795	2188355	.	-	0	ID=cds1781;Name=YP_002346920.1;Parent=gene1869;Dbxref=UniProtKB%2FTrEMBL:Q9ZC41,Genbank:YP_002346920.1,GeneID:1174770;gbkey=CDS;product=hypothetical protein;protein_id=YP_002346920.1;transl_table=11
NC_003143.1	RefSeq	gene	2188575	2189804	.	-	.	ID=gene1870;Name=YPO1932;Dbxref=GeneID:1174771;gbkey=Gene;locus_tag=YPO1932
NC_003143.1	RefSeq	CDS	2188575	2189804	.	-	0	ID=cds1782;Name=YP_002346921.1;Parent=gene1870;Dbxref=InterPro:IPR005829,InterPro:IPR007114,InterPro:IPR011701,UniProtKB%2FTrEMBL:Q9ZC42,Genbank:YP_002346921.1,GeneID:1174771;gbkey=CDS;product=sugar transporter;protein_id=YP_002346921.1;transl_table=11
NC_003143.1	RefSeq	region	2189400	2189477	.	-	.	ID=id1315;Note=PS00217 Sugar transport proteins signature 2.;Dbxref=GeneID:1174771;gbkey=misc_feature
NC_003143.1	RefSeq	gene	2189870	2190739	.	-	.	ID=gene1871;Name=YPO1933;Dbxref=GeneID:1174772;gbkey=Gene;locus_tag=YPO1933
NC_003143.1	RefSeq	CDS	2189870	2190739	.	-	0	ID=cds1783;Name=YP_002346922.1;Parent=gene1871;Dbxref=InterPro:IPR006992,UniProtKB%2FTrEMBL:Q9ZC43,Genbank:YP_002346922.1,GeneID:1174772;gbkey=CDS;product=dicarboxylic acid hydrolase;protein_id=YP_002346922.1;transl_table=11
NC_003143.1	RefSeq	gene	2190851	2191813	.	+	.	ID=gene1872;Name=YPO1934;Dbxref=GeneID:1174773;gbkey=Gene;locus_tag=YPO1934
NC_003143.1	RefSeq	CDS	2190851	2191813	.	+	0	ID=cds1784;Name=YP_002346923.1;Parent=gene1872;Dbxref=InterPro:IPR000847,InterPro:IPR005119,InterPro:IPR011991,UniProtKB%2FTrEMBL:Q9ZC44,Genbank:YP_002346923.1,GeneID:1174773;gbkey=CDS;product=LysR family transcriptional regulator;protein_id=YP_002346923.1;transl_table=11
NC_003143.1	RefSeq	region	2190896	2190961	.	+	.	ID=id1316;Note=Predicted helix-turn-helix motif with score 1128 %28%2B3.03 SD%29 at aa 16-37%2C sequence SNFSIAAERLHISISSLSKRIV;Dbxref=GeneID:1174773;gbkey=misc_feature
NC_003143.1	RefSeq	region	2190899	2190991	.	+	.	ID=id1317;Note=PS00044 Bacterial regulatory proteins%2C lysR family signature.;Dbxref=GeneID:1174773;gbkey=misc_feature
NC_003143.1	RefSeq	gene	2192118	2192717	.	-	.	ID=gene1873;Name=YPO1935;Dbxref=GeneID:1174774;gbkey=Gene;locus_tag=YPO1935
NC_003143.1	RefSeq	CDS	2192118	2192717	.	-	0	ID=cds1785;Name=YP_002346924.1;Parent=gene1873;Note=Part of the NQR complex which has six subunits NqrA%2C NqrB%2C NqrC%2C NqrD%2C NqrE and NqrF. NQR complex catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions%2C coupled with the transport of Na%28%2B%29 ions from the cytoplasm to the periplasm. NqrA to nqrE are probably involved in the second step%2C the conversion of ubisemiquinone to ubiquinol;Dbxref=InterPro:IPR003667,InterPro:IPR010967,UniProtKB%2FTrEMBL:Q0WFL4,Genbank:YP_002346924.1,GeneID:1174774;gbkey=CDS;product=Na%28%2B%29-translocating NADH-quinone reductase subunit E;protein_id=YP_002346924.1;transl_table=11
NC_003143.1	RefSeq	gene	2193069	2194229	.	+	.	ID=gene1874;Name=YPO1936;Dbxref=GeneID:1174775;gbkey=Gene;locus_tag=YPO1936
NC_003143.1	RefSeq	CDS	2193069	2194229	.	+	0	ID=cds1786;Name=YP_002346925.1;Parent=gene1874;Dbxref=InterPro:IPR004839,UniProtKB%2FTrEMBL:Q9ZC46,Genbank:YP_002346925.1,GeneID:1174775;gbkey=CDS;product=aminotransferase;protein_id=YP_002346925.1;transl_table=11
NC_003143.1	RefSeq	gene	2194425	2195951	.	-	.	ID=gene1875;Name=ansP;Dbxref=GeneID:1174776;gbkey=Gene;gene=ansP;locus_tag=YPO1937
NC_003143.1	RefSeq	CDS	2194425	2195951	.	-	0	ID=cds1787;Name=YP_002346926.1;Parent=gene1875;Dbxref=InterPro:IPR002293,InterPro:IPR004840,InterPro:IPR004841,UniProtKB%2FTrEMBL:Q0WFL2,Genbank:YP_002346926.1,GeneID:1174776;gbkey=CDS;gene=ansP;product=L-asparagine permease;protein_id=YP_002346926.1;transl_table=11
NC_003143.1	RefSeq	region	2195688	2195780	.	-	.	ID=id1318;Note=PS00218 Amino acid permeases signature.;Dbxref=GeneID:1174776;gbkey=misc_feature;gene=ansP
NC_003143.1	RefSeq	gene	2196676	2197446	.	-	.	ID=gene1876;Name=YPO1938;Dbxref=GeneID:1174777;gbkey=Gene;locus_tag=YPO1938
NC_003143.1	RefSeq	CDS	2196676	2197446	.	-	0	ID=cds1788;Name=YP_002346927.1;Parent=gene1876;Dbxref=InterPro:IPR000485,InterPro:IPR001034,InterPro:IPR011991,UniProtKB%2FTrEMBL:Q9ZC48,Genbank:YP_002346927.1,GeneID:1174777;gbkey=CDS;product=deoR family transcriptional regulator;protein_id=YP_002346927.1;transl_table=11
NC_003143.1	RefSeq	region	2197324	2197389	.	-	.	ID=id1319;Note=Predicted helix-turn-helix motif with score 1817 %28%2B5.38 SD%29 at aa 20-41%2C sequence VSIAELTERLGVSHMTIRRDVQ;Dbxref=GeneID:1174777;gbkey=misc_feature
NC_003143.1	RefSeq	region	2197327	2197431	.	-	.	ID=id1320;Note=PS00894 Bacterial regulatory proteins%2C deoR family signature.;Dbxref=GeneID:1174777;gbkey=misc_feature
NC_003143.1	RefSeq	gene	2198642	2199664	.	+	.	ID=gene1877;Name=YPO1939;Dbxref=GeneID:1174778;gbkey=Gene;locus_tag=YPO1939
NC_003143.1	RefSeq	CDS	2198642	2199664	.	+	0	ID=cds1789;Name=YP_002346928.1;Parent=gene1877;Note=catalyzes the formation of glutamate from glutamine;Dbxref=InterPro:IPR000871,InterPro:IPR007043,InterPro:IPR012338,UniProtKB%2FTrEMBL:Q0WFL0,Genbank:YP_002346928.1,GeneID:1174778;gbkey=CDS;product=glutaminase;protein_id=YP_002346928.1;transl_table=11
NC_003143.1	RefSeq	region	2198894	2198941	.	+	.	ID=id1321;Note=PS00146 Beta-lactamase class-A active site.;Dbxref=GeneID:1174778;gbkey=misc_feature
NC_003143.1	RefSeq	gene	2199775	2201415	.	+	.	ID=gene1878;Name=YPO1940;Dbxref=GeneID:1174779;gbkey=Gene;locus_tag=YPO1940
NC_003143.1	RefSeq	CDS	2199775	2201415	.	+	0	ID=cds1790;Name=YP_002346929.1;Parent=gene1878;Dbxref=InterPro:IPR007114,InterPro:IPR011701,UniProtKB%2FTrEMBL:Q9ZC50,Genbank:YP_002346929.1,GeneID:1174779;gbkey=CDS;product=hypothetical protein;protein_id=YP_002346929.1;transl_table=11
NC_003143.1	RefSeq	gene	2201996	2203915	.	+	.	ID=gene1879;Name=YPO1941;Dbxref=GeneID:1174780;gbkey=Gene;locus_tag=YPO1941
NC_003143.1	RefSeq	CDS	2201996	2203915	.	+	0	ID=cds1791;Name=YP_002346930.1;Parent=gene1879;Dbxref=InterPro:IPR004923,UniProtKB%2FTrEMBL:Q9ZC51,Genbank:YP_002346930.1,GeneID:1174780;gbkey=CDS;product=hypothetical protein;protein_id=YP_002346930.1;transl_table=11
NC_003143.1	RefSeq	region	2203712	2203735	.	+	.	ID=id1322;Note=PS00017 ATP%2FGTP-binding site motif A %28P-loop%29.;Dbxref=GeneID:1174780;gbkey=misc_feature
NC_003143.1	RefSeq	gene	2204119	2204646	.	+	.	ID=gene1880;Name=YPO1942;Dbxref=GeneID:1174781;gbkey=Gene;locus_tag=YPO1942
NC_003143.1	RefSeq	CDS	2204119	2204646	.	+	0	ID=cds1792;Name=YP_002346931.1;Parent=gene1880;Dbxref=UniProtKB%2FTrEMBL:Q9ZC52,Genbank:YP_002346931.1,GeneID:1174781;gbkey=CDS;product=hypothetical protein;protein_id=YP_002346931.1;transl_table=11
NC_003143.1	RefSeq	gene	2204944	2206356	.	+	.	ID=gene1881;Name=YPO1943;Dbxref=GeneID:1174782;gbkey=Gene;locus_tag=YPO1943
NC_003143.1	RefSeq	CDS	2204947	2206356	.	+	0	ID=cds1793;Name=YP_002346932.1;Parent=gene1881;Dbxref=InterPro:IPR007029,InterPro:IPR009078,UniProtKB%2FTrEMBL:Q9ZC53,Genbank:YP_002346932.1,GeneID:1174782;gbkey=CDS;product=hypothetical protein;protein_id=YP_002346932.1;transl_table=11
NC_003143.1	RefSeq	gene	2206359	2207651	.	+	.	ID=gene1882;Name=YPO1944;Dbxref=GeneID:1174783;gbkey=Gene;locus_tag=YPO1944
NC_003143.1	RefSeq	CDS	2206359	2207651	.	+	0	ID=cds1794;Name=YP_002346933.1;Parent=gene1882;Dbxref=InterPro:IPR003838,UniProtKB%2FTrEMBL:Q9ZC54,Genbank:YP_002346933.1,GeneID:1174783;gbkey=CDS;product=hypothetical protein;protein_id=YP_002346933.1;transl_table=11
NC_003143.1	RefSeq	gene	2207641	2208804	.	+	.	ID=gene1883;Name=YPO1945;Dbxref=GeneID:1174784;gbkey=Gene;locus_tag=YPO1945
NC_003143.1	RefSeq	CDS	2207641	2208804	.	+	0	ID=cds1795;Name=YP_002346934.1;Parent=gene1883;Dbxref=InterPro:IPR003838,UniProtKB%2FTrEMBL:Q9ZC55,Genbank:YP_002346934.1,GeneID:1174784;gbkey=CDS;product=hypothetical protein;protein_id=YP_002346934.1;transl_table=11
NC_003143.1	RefSeq	gene	2208808	2209521	.	+	.	ID=gene1884;Name=YPO1946;Dbxref=GeneID:1174785;gbkey=Gene;locus_tag=YPO1946
NC_003143.1	RefSeq	CDS	2208808	2209521	.	+	0	ID=cds1796;Name=YP_002346935.1;Parent=gene1884;Dbxref=InterPro:IPR003439,InterPro:IPR003593,UniProtKB%2FTrEMBL:Q9ZC56,Genbank:YP_002346935.1,GeneID:1174785;gbkey=CDS;product=ABC transporter ATP-binding protein;protein_id=YP_002346935.1;transl_table=11
NC_003143.1	RefSeq	region	2208955	2208978	.	+	.	ID=id1323;Note=PS00017 ATP%2FGTP-binding site motif A %28P-loop%29.;Dbxref=GeneID:1174785;gbkey=misc_feature
NC_003143.1	RefSeq	region	2209258	2209302	.	+	.	ID=id1324;Note=PS00211 ABC transporters family signature.;Dbxref=GeneID:1174785;gbkey=misc_feature
NC_003143.1	RefSeq	gene	2209511	2210008	.	+	.	ID=gene1885;Name=YPO1947;Dbxref=GeneID:1174786;gbkey=Gene;locus_tag=YPO1947
NC_003143.1	RefSeq	CDS	2209511	2210008	.	+	0	ID=cds1797;Name=YP_002346936.1;Parent=gene1885;Dbxref=InterPro:IPR011594,InterPro:IPR012335,InterPro:IPR012336,InterPro:IPR013740,UniProtKB%2FTrEMBL:Q9ZC57,Genbank:YP_002346936.1,GeneID:1174786;gbkey=CDS;product=thioredoxin;protein_id=YP_002346936.1;transl_table=11
NC_003143.1	RefSeq	region	2209538	2209570	.	+	.	ID=id1325;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site.;Dbxref=GeneID:1174786;gbkey=misc_feature
NC_003143.1	RefSeq	gene	2210008	2210319	.	+	.	ID=gene1886;Name=YPO1948;Dbxref=GeneID:1174787;gbkey=Gene;locus_tag=YPO1948
NC_003143.1	RefSeq	CDS	2210008	2210319	.	+	0	ID=cds1798;Name=YP_002346937.1;Parent=gene1886;Dbxref=InterPro:IPR003088,InterPro:IPR009056,InterPro:IPR012282,UniProtKB%2FTrEMBL:Q0WFK1,Genbank:YP_002346937.1,GeneID:1174787;gbkey=CDS;product=cytochrome;protein_id=YP_002346937.1;transl_table=11
NC_003143.1	RefSeq	region	2210095	2210112	.	+	.	ID=id1326;Note=PS00190 Cytochrome c family heme-binding site signature.;Dbxref=GeneID:1174787;gbkey=misc_feature
NC_003143.1	RefSeq	gene	2210492	2211379	.	+	.	ID=gene1887;Name=tehB;Dbxref=GeneID:1174788;gbkey=Gene;gene=tehB;locus_tag=YPO1949
NC_003143.1	RefSeq	CDS	2210492	2211379	.	+	0	ID=cds1799;Name=YP_002346938.1;Parent=gene1887;Note=with TehA confers resistance to tellurite;Dbxref=InterPro:IPR004537,UniProtKB%2FTrEMBL:Q9ZC59,Genbank:YP_002346938.1,GeneID:1174788;gbkey=CDS;gene=tehB;product=tellurite resistance protein TehB;protein_id=YP_002346938.1;transl_table=11
NC_003143.1	RefSeq	gene	2211520	2212737	.	+	.	ID=gene1888;Name=YPO1950;Dbxref=GeneID:1174789;gbkey=Gene;locus_tag=YPO1950
NC_003143.1	RefSeq	CDS	2211520	2212737	.	+	0	ID=cds1800;Name=YP_002346939.1;Parent=gene1888;Dbxref=InterPro:IPR000994,UniProtKB%2FTrEMBL:Q9ZC60,Genbank:YP_002346939.1,GeneID:1174789;gbkey=CDS;product=endopeptidase;protein_id=YP_002346939.1;transl_table=11
NC_003143.1	RefSeq	region	2212757	2220065	.	+	.	ID=id1327;Note=hms hemin storage or pigmentation locus. Required for the blocking proventriculae of fleas.;gbkey=misc_feature
NC_003143.1	RefSeq	gene	2213406	2215874	.	+	.	ID=gene1889;Name=hmsH;Dbxref=GeneID:1174790;gbkey=Gene;gene=hmsH;locus_tag=YPO1951
NC_003143.1	RefSeq	CDS	2213406	2215874	.	+	0	ID=cds1801;Name=YP_002346940.1;Parent=gene1889;Note=in Yersinia this protein is important for biofilm  formation and hemin adsorption;Dbxref=InterPro:IPR011990,InterPro:IPR013105,UniProtKB%2FTrEMBL:Q56939,Genbank:YP_002346940.1,GeneID:1174790;gbkey=CDS;gene=hmsH;product=hypothetical protein;protein_id=YP_002346940.1;transl_table=11
NC_003143.1	RefSeq	gene	2215887	2217908	.	+	.	ID=gene1890;Name=hmsF;Dbxref=GeneID:1174791;gbkey=Gene;gene=hmsF;locus_tag=YPO1952
NC_003143.1	RefSeq	CDS	2215887	2217908	.	+	0	ID=cds1802;Name=YP_002346941.1;Parent=gene1890;Note=in Yersinia this protein is involved in biofilm formation and hemin adsorption%3B related protein PgaB in Escherichia coli is an outer membrane N-deacetylase involved in poly-beta-1%2C6-N-acetyl-D-glucosamine %28PGA%29 export;Dbxref=InterPro:IPR002509,UniProtKB%2FTrEMBL:Q9R7V4,Genbank:YP_002346941.1,GeneID:1174791;gbkey=CDS;gene=hmsF;product=outer membrane N-deacetylase;protein_id=YP_002346941.1;transl_table=11
NC_003143.1	RefSeq	region	2215923	2215955	.	+	.	ID=id1328;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site.;Dbxref=GeneID:1174791;gbkey=misc_feature;gene=hmsF
NC_003143.1	RefSeq	region	2217327	2217374	.	+	.	ID=id1329;Note=PS00225 Crystallins beta and gamma %27Greek key%27 motif signature.;Dbxref=GeneID:1174791;gbkey=misc_feature;gene=hmsF
NC_003143.1	RefSeq	gene	2217898	2219232	.	+	.	ID=gene1891;Name=hmsR;Dbxref=GeneID:1174792;gbkey=Gene;gene=hmsR;locus_tag=YPO1953
NC_003143.1	RefSeq	CDS	2217898	2219232	.	+	0	ID=cds1803;Name=YP_002346942.1;Parent=gene1891;Note=predicted polysaccharide polymerase involved in biofilm formation%3B in Escherichia coli the related protein PgaC is required for the synthesis of the beta-1%2C6-N-acetylglucosamine polysaccharide%3B in Yersinia the HmsR protein is an inner membrane protein;Dbxref=InterPro:IPR001173,UniProtKB%2FTrEMBL:Q0WFJ6,Genbank:YP_002346942.1,GeneID:1174792;gbkey=CDS;gene=hmsR;product=N-glycosyltransferase;protein_id=YP_002346942.1;transl_table=11
NC_003143.1	RefSeq	gene	2219229	2219696	.	+	.	ID=gene1892;Name=hmsS;Dbxref=GeneID:1174793;gbkey=Gene;gene=hmsS;locus_tag=YPO1954
NC_003143.1	RefSeq	CDS	2219229	2219696	.	+	0	ID=cds1804;Name=YP_002346943.1;Parent=gene1892;Note=in Yersinia this gene is involved in biofilm formation and hemin adsorption;Dbxref=UniProtKB%2FTrEMBL:P74989,Genbank:YP_002346943.1,GeneID:1174793;gbkey=CDS;gene=hmsS;product=hemin storage system protein;protein_id=YP_002346943.1;transl_table=11
NC_003143.1	RefSeq	gene	2220029	2220928	.	+	.	ID=gene1893;Name=YPO1955;Dbxref=GeneID:1174794;gbkey=Gene;locus_tag=YPO1955
NC_003143.1	RefSeq	CDS	2220029	2220928	.	+	0	ID=cds1805;Name=YP_002346944.1;Parent=gene1893;Dbxref=InterPro:IPR000182,UniProtKB%2FTrEMBL:Q9ZC61,Genbank:YP_002346944.1,GeneID:1174794;gbkey=CDS;product=acetyltransferase;protein_id=YP_002346944.1;transl_table=11
NC_003143.1	RefSeq	region	2220110	2220178	.	+	.	ID=id1330;Note=1 probable transmembrane helix predicted;Dbxref=GeneID:1174794;gbkey=misc_feature
NC_003143.1	RefSeq	gene	2221367	2221645	.	+	.	ID=gene1894;Name=YPO1956;Dbxref=GeneID:1174795;gbkey=Gene;locus_tag=YPO1956
NC_003143.1	RefSeq	CDS	2221367	2221645	.	+	0	ID=cds1806;Name=YP_002346945.1;Parent=gene1894;Dbxref=UniProtKB%2FTrEMBL:Q0WFJ3,Genbank:YP_002346945.1,GeneID:1174795;gbkey=CDS;product=hypothetical protein;protein_id=YP_002346945.1;transl_table=11
NC_003143.1	RefSeq	gene	2221705	2222493	.	+	.	ID=gene1895;Name=phoH;Dbxref=GeneID:1174796;gbkey=Gene;gene=phoH;gene_synonym=psiH;locus_tag=YPO1957
NC_003143.1	RefSeq	CDS	2221705	2222493	.	+	0	ID=cds1807;Name=YP_002346946.1;Parent=gene1895;Dbxref=InterPro:IPR003714,UniProtKB%2FTrEMBL:Q9ZC62,Genbank:YP_002346946.1,GeneID:1174796;gbkey=CDS;gene=phoH;product=hypothetical protein;protein_id=YP_002346946.1;transl_table=11
NC_003143.1	RefSeq	region	2221945	2221968	.	+	.	ID=id1331;Note=PS00017 ATP%2FGTP-binding site motif A %28P-loop%29.;Dbxref=GeneID:1174796;gbkey=misc_feature;gene=phoH
NC_003143.1	RefSeq	gene	2222596	2223696	.	-	.	ID=gene1896;Name=chaA;Dbxref=GeneID:1174797;gbkey=Gene;gene=chaA;locus_tag=YPO1958
NC_003143.1	RefSeq	CDS	2222596	2223696	.	-	0	ID=cds1808;Name=YP_002346947.1;Parent=gene1896;Dbxref=InterPro:IPR004713,InterPro:IPR004837,UniProtKB%2FTrEMBL:Q9ZC63,Genbank:YP_002346947.1,GeneID:1174797;gbkey=CDS;gene=chaA;product=calcium%2Fsodium:proton antiporter;protein_id=YP_002346947.1;transl_table=11
NC_003143.1	RefSeq	gene	2224245	2226026	.	-	.	ID=gene1897;Name=narX;Dbxref=GeneID:1174798;gbkey=Gene;gene=narX;locus_tag=YPO1959
NC_003143.1	RefSeq	CDS	2224245	2226026	.	-	0	ID=cds1809;Name=YP_002346948.1;Parent=gene1897;Dbxref=InterPro:IPR003594,InterPro:IPR003660,InterPro:IPR005467,InterPro:IPR011712,UniProtKB%2FTrEMBL:Q9ZC64,Genbank:YP_002346948.1,GeneID:1174798;gbkey=CDS;gene=narX;product=nitrate%2Fnitrite sensor protein NarX;protein_id=YP_002346948.1;transl_table=11
NC_003143.1	RefSeq	gene	2226336	2227757	.	+	.	ID=gene1898;Name=YPO1960;Dbxref=GeneID:1174799;gbkey=Gene;locus_tag=YPO1960
NC_003143.1	RefSeq	CDS	2226336	2227757	.	+	0	ID=cds1810;Name=YP_002346949.1;Parent=gene1898;Dbxref=InterPro:IPR000524,InterPro:IPR004839,UniProtKB%2FTrEMBL:Q9ZC65,Genbank:YP_002346949.1,GeneID:1174799;gbkey=CDS;product=GntR family transcriptional regulator;protein_id=YP_002346949.1;transl_table=11
NC_003143.1	RefSeq	region	2228092	2228151	.	+	.	ID=id1332;Note=1 probable transmembrane helix predicted;gbkey=misc_feature
NC_003143.1	RefSeq	gene	2228394	2229638	.	+	.	ID=gene1899;Name=argD;Dbxref=GeneID:1174801;gbkey=Gene;gene=argD;gene_synonym=astC,cstC;locus_tag=YPO1962
NC_003143.1	RefSeq	CDS	2228394	2229638	.	+	0	ID=cds1811;Name=YP_002346951.1;Parent=gene1899;Note=catalyzes the transamination of 2-N-succinylornithine and alpha-ketoglutarate into 2-N-succinylglutamate semialdehyde and glutamate%3B also functions as the catabolic acetylornithine aminotransferase catalyzing the formation of 2-N-acetylglutamate semialdehyde and glutamate from 2-N-acetylornithine and alpha-ketoglutarate;Dbxref=InterPro:IPR004636,InterPro:IPR005814,UniProtKB%2FTrEMBL:Q0WFI7,Genbank:YP_002346951.1,GeneID:1174801;gbkey=CDS;gene=argD;product=bifunctional succinylornithine transaminase%2Facetylornithine transaminase;protein_id=YP_002346951.1;transl_table=11
NC_003143.1	RefSeq	region	2229075	2229188	.	+	.	ID=id1333;Note=PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site.;Dbxref=GeneID:1174801;gbkey=misc_feature;gene=argD
NC_003143.1	RefSeq	gene	2229668	2230720	.	+	.	ID=gene1900;Name=astA;Dbxref=GeneID:1174802;gbkey=Gene;gene=astA;locus_tag=YPO1963
NC_003143.1	RefSeq	CDS	2229668	2230720	.	+	0	ID=cds1812;Name=YP_002346952.1;Parent=gene1900;Dbxref=UniProtKB%2FTrEMBL:Q9ZC67,Genbank:YP_002346952.1,GeneID:1174802;gbkey=CDS;gene=astA;product=arginine succinyltransferase;protein_id=YP_002346952.1;transl_table=11
NC_003143.1	RefSeq	gene	2230717	2232234	.	+	.	ID=gene1901;Name=astD;Dbxref=GeneID:1174803;gbkey=Gene;gene=astD;locus_tag=YPO1964
NC_003143.1	RefSeq	CDS	2230717	2232234	.	+	0	ID=cds1813;Name=YP_002346953.1;Parent=gene1901;Note=a high throughput screen identified this enzyme as an aldehyde dehydrogenase with broad substrate specificity%3B converts succinylglutamate semialdehyde and NAD to succinylglutamate and NADH;Dbxref=UniProtKB%2FTrEMBL:Q9ZC68,Genbank:YP_002346953.1,GeneID:1174803;gbkey=CDS;gene=astD;product=succinylglutamic semialdehyde dehydrogenase;protein_id=YP_002346953.1;transl_table=11
NC_003143.1	RefSeq	region	2231482	2231505	.	+	.	ID=id1334;Note=PS00687 Aldehyde dehydrogenases glutamic acid active site.;Dbxref=GeneID:1174803;gbkey=misc_feature;gene=astD
NC_003143.1	RefSeq	region	2231566	2231601	.	+	.	ID=id1335;Note=PS00070 Aldehyde dehydrogenases cysteine active site.;Dbxref=GeneID:1174803;gbkey=misc_feature;gene=astD
NC_003143.1	RefSeq	gene	2232258	2233601	.	+	.	ID=gene1902;Name=astB;Dbxref=GeneID:1174804;gbkey=Gene;gene=astB;locus_tag=YPO1965
NC_003143.1	RefSeq	CDS	2232258	2233601	.	+	0	ID=cds1814;Name=YP_002346954.1;Parent=gene1902;Note=catalyzes the hydrolysis of 2-N-succinylarginine into 2-N-succinylornithine%2C ammonia and carbon dioxide in arginine degradation;Dbxref=UniProtKB%2FTrEMBL:Q9ZC69,Genbank:YP_002346954.1,GeneID:1174804;gbkey=CDS;gene=astB;product=succinylarginine dihydrolase;protein_id=YP_002346954.1;transl_table=11
NC_003143.1	RefSeq	gene	2233662	2234654	.	+	.	ID=gene1903;Name=astE;Dbxref=GeneID:1174805;gbkey=Gene;gene=astE;locus_tag=YPO1966
NC_003143.1	RefSeq	CDS	2233662	2234654	.	+	0	ID=cds1815;Name=YP_002346955.1;Parent=gene1903;Note=catalyzes the formation of succinate and glutamate from N%282%29-succinylglutamate in arginine catabolism;Dbxref=InterPro:IPR007036,UniProtKB%2FTrEMBL:Q0WFI3,Genbank:YP_002346955.1,GeneID:1174805;gbkey=CDS;gene=astE;product=succinylglutamate desuccinylase;protein_id=YP_002346955.1;transl_table=11
NC_003143.1	RefSeq	region	2235390	2236259	.	+	.	ID=id1336;Note=Previously sequenced Yersinia pestis hypothetical protein TR:Q9ZC71 %28EMBL:AL031866%29 %28315 aa%29 fasta scores: E%28%29: 0%2C 100.0%25 id in 315 aa. This CDS is disrupted by the insertion of an IS100 element. The full length CDS is similar to Escherichia coli outer membrane porin protein NmpC protein NmpC SW:NMPC_ECOLI %28P21420%29 %28365 aa%29 fasta scores: E%28%29: 0%2C 56.2%25 id in 370 aa;gbkey=misc_feature;part=1%2F2;pseudo=true
NC_003143.1	RefSeq	region	2238223	2238426	.	+	.	ID=id1336;Note=Previously sequenced Yersinia pestis hypothetical protein TR:Q9ZC71 %28EMBL:AL031866%29 %28315 aa%29 fasta scores: E%28%29: 0%2C 100.0%25 id in 315 aa. This CDS is disrupted by the insertion of an IS100 element. The full length CDS is similar to Escherichia coli outer membrane porin protein NmpC protein NmpC SW:NMPC_ECOLI %28P21420%29 %28365 aa%29 fasta scores: E%28%29: 0%2C 56.2%25 id in 370 aa;gbkey=misc_feature;part=2%2F2;pseudo=true
NC_003143.1	RefSeq	region	2236259	2236264	.	+	.	ID=id1337;Note=sequence duplication around IS insertion;gbkey=misc_feature
NC_003143.1	RefSeq	repeat_region	2236265	2238215	.	+	.	ID=id1338;Note=insertion sequence:IS100;gbkey=repeat_region
NC_003143.1	RefSeq	repeat_region	2236265	2236292	.	+	.	ID=id1339;Note=IS100 inverted repeat;gbkey=repeat_region
NC_003143.1	RefSeq	gene	2236351	2237397	.	+	.	ID=gene1904;Name=y1093;Dbxref=GeneID:1174807;gbkey=Gene;gene=y1093;gene_synonym=ypmt1;locus_tag=YPO1968
NC_003143.1	RefSeq	CDS	2236351	2237397	.	+	0	ID=cds1816;Name=YP_002346956.1;Parent=gene1904;Dbxref=InterPro:IPR001584,InterPro:IPR006120,InterPro:IPR009057,InterPro:IPR012287,InterPro:IPR012337,UniProtKB%2FTrEMBL:Q0WFI2,Genbank:YP_002346956.1,GeneID:1174807;gbkey=CDS;gene=y1093;product=transposase for insertion sequence IS100;protein_id=YP_002346956.1;transl_table=11
NC_003143.1	RefSeq	region	2236402	2236467	.	+	.	ID=id1340;Note=Predicted helix-turn-helix motif with score 2147 %28%2B6.50 SD%29 at aa 18-39%2C sequence MSSRAIARELGISRNTVKRYLQ;Dbxref=GeneID:1174807;gbkey=misc_feature;gene=y1093
NC_003143.1	RefSeq	gene	2237397	2238149	.	+	.	ID=gene1905;Name=YPO1969;Note=y0016%3B y1054%3B ypmt1.02%3B ypmt1.57c%3B yppcp1.02;Dbxref=GeneID:1174808;gbkey=Gene;locus_tag=YPO1969
NC_003143.1	RefSeq	CDS	2237397	2238149	.	+	0	ID=cds1817;Name=YP_002346957.1;Parent=gene1905;Dbxref=InterPro:IPR001270,InterPro:IPR002611,InterPro:IPR003593,UniProtKB%2FTrEMBL:Q0WFI1,Genbank:YP_002346957.1,GeneID:1174808;gbkey=CDS;product=transposase%2FIS protein;protein_id=YP_002346957.1;transl_table=11
NC_003143.1	RefSeq	region	2237694	2237717	.	+	.	ID=id1341;Note=PS00017 ATP%2FGTP-binding site motif A %28P-loop%29.;Dbxref=GeneID:1174808;gbkey=misc_feature
NC_003143.1	RefSeq	repeat_region	2238188	2238215	.	-	.	ID=id1342;Note=IS100 inverted repeat;gbkey=repeat_region
NC_003143.1	RefSeq	region	2238216	2238221	.	+	.	ID=id1343;Note=sequence duplication around IS insertion;gbkey=misc_feature
NC_003143.1	RefSeq	gene	2238726	2239532	.	-	.	ID=gene1906;Name=hutG;Dbxref=GeneID:1174809;gbkey=Gene;gene=hutG;locus_tag=YPO1971
NC_003143.1	RefSeq	CDS	2238726	2239532	.	-	0	ID=cds1818;Name=YP_002346958.1;Parent=gene1906;Dbxref=InterPro:IPR007709,InterPro:IPR010247,UniProtKB%2FTrEMBL:Q9ZC73,Genbank:YP_002346958.1,GeneID:1174809;gbkey=CDS;gene=hutG;product=N-formylglutamate amidohydrolase;protein_id=YP_002346958.1;transl_table=11
NC_003143.1	RefSeq	region	2239206	2239229	.	-	.	ID=id1344;Note=PS00017 ATP%2FGTP-binding site motif A %28P-loop%29.;Dbxref=GeneID:1174809;gbkey=misc_feature;gene=hutG
NC_003143.1	RefSeq	gene	2239529	2240749	.	-	.	ID=gene1907;Name=hutI;Dbxref=GeneID:1174810;gbkey=Gene;gene=hutI;locus_tag=YPO1972
NC_003143.1	RefSeq	CDS	2239529	2240749	.	-	0	ID=cds1819;Name=YP_002346959.1;Parent=gene1907;Note=catalyzing the hydrolysis of 4-imidazolone-5-propionate to N-formimidoyl-L-glutamate%2C the third step in the histidine degradation pathway;Dbxref=InterPro:IPR005920,InterPro:IPR006680,InterPro:IPR011059,InterPro:IPR011550,UniProtKB%2FTrEMBL:Q0WFH9,Genbank:YP_002346959.1,GeneID:1174810;gbkey=CDS;gene=hutI;product=imidazolonepropionase;protein_id=YP_002346959.1;transl_table=11
NC_003143.1	RefSeq	gene	2240953	2241720	.	-	.	ID=gene1908;Name=hutC;Dbxref=GeneID:1174811;gbkey=Gene;gene=hutC;locus_tag=YPO1973
NC_003143.1	RefSeq	CDS	2240953	2241720	.	-	0	ID=cds1820;Name=YP_002346960.1;Parent=gene1908;Dbxref=InterPro:IPR000524,InterPro:IPR010248,InterPro:IPR011663,UniProtKB%2FTrEMBL:Q9ZC75,Genbank:YP_002346960.1,GeneID:1174811;gbkey=CDS;gene=hutC;product=GntR family transcriptional regulator;protein_id=YP_002346960.1;transl_table=11
NC_003143.1	RefSeq	region	2241517	2241591	.	-	.	ID=id1345;Note=PS00043 Bacterial regulatory proteins%2C gntR family signature.;Dbxref=GeneID:1174811;gbkey=misc_feature;gene=hutC
NC_003143.1	RefSeq	region	2241523	2241588	.	-	.	ID=id1346;Note=Predicted helix-turn-helix motif with score 1438 %28%2B4.08 SD%29 at aa 45-66%2C sequence PSESELVTELGVSRMTINRALR;Dbxref=GeneID:1174811;gbkey=misc_feature;gene=hutC
NC_003143.1	RefSeq	gene	2241868	2243238	.	+	.	ID=gene1909;Name=YPO1974;Dbxref=GeneID:1174812;gbkey=Gene;locus_tag=YPO1974
NC_003143.1	RefSeq	CDS	2241868	2243238	.	+	0	ID=cds1821;Name=YP_002346961.1;Parent=gene1909;Note=catalyzes the deimination of N-formimino-L-glutamate to ammonia and N-formyl-L-glutamate;Dbxref=InterPro:IPR006680,InterPro:IPR010252,InterPro:IPR011059,UniProtKB%2FTrEMBL:Q9ZC76,Genbank:YP_002346961.1,GeneID:1174812;gbkey=CDS;product=N-formimino-L-glutamate deiminase;protein_id=YP_002346961.1;transl_table=11
NC_003143.1	RefSeq	gene	2243238	2243810	.	+	.	ID=gene1910;Name=YPO1975;Dbxref=GeneID:1174813;gbkey=Gene;locus_tag=YPO1975
NC_003143.1	RefSeq	CDS	2243238	2243810	.	+	0	ID=cds1822;Name=YP_002346962.1;Parent=gene1910;Dbxref=InterPro:IPR010282,UniProtKB%2FTrEMBL:Q9ZC77,Genbank:YP_002346962.1,GeneID:1174813;gbkey=CDS;product=hypothetical protein;protein_id=YP_002346962.1;transl_table=11
NC_003143.1	RefSeq	gene	2243988	2245964	.	-	.	ID=gene1911;Name=YPO1976;Dbxref=GeneID:1174814;gbkey=Gene;locus_tag=YPO1976
NC_003143.1	RefSeq	CDS	2243988	2245964	.	-	0	ID=cds1823;Name=YP_002346963.1;Parent=gene1911;Dbxref=InterPro:IPR005801,UniProtKB%2FTrEMBL:Q9ZC78,Genbank:YP_002346963.1,GeneID:1174814;gbkey=CDS;product=hypothetical protein;protein_id=YP_002346963.1;transl_table=11
NC_003143.1	RefSeq	repeat_region	2245873	2245901	.	-	.	ID=id1347;Note=repeat region with 4.8xGTGTAG.;Dbxref=GeneID:1174814;gbkey=repeat_region
NC_003143.1	RefSeq	gene	2246601	2247609	.	+	.	ID=gene1912;Name=YPO1977;Dbxref=GeneID:1174815;gbkey=Gene;locus_tag=YPO1977;pseudo=true
NC_003143.1	RefSeq	gene	2247623	2248639	.	+	.	ID=gene1913;Name=YPO1979;Dbxref=GeneID:1174816;gbkey=Gene;locus_tag=YPO1979
NC_003143.1	RefSeq	CDS	2247623	2248639	.	+	0	ID=cds1824;Name=YP_002346964.1;Parent=gene1913;Dbxref=InterPro:IPR000169,InterPro:IPR001509,UniProtKB%2FTrEMBL:Q9ZC81,Genbank:YP_002346964.1,GeneID:1174816;gbkey=CDS;product=dehydrogenase;protein_id=YP_002346964.1;transl_table=11
NC_003143.1	RefSeq	region	2247689	2247721	.	+	.	ID=id1348;Note=PS00639 Eukaryotic thiol %28cysteine%29 proteases histidine active site.;Dbxref=GeneID:1174816;gbkey=misc_feature
NC_003143.1	RefSeq	gene	2248632	2249438	.	+	.	ID=gene1914;Name=YPO1980;Dbxref=GeneID:1174817;gbkey=Gene;locus_tag=YPO1980
NC_003143.1	RefSeq	CDS	2248632	2249438	.	+	0	ID=cds1825;Name=YP_002346965.1;Parent=gene1914;Dbxref=InterPro:IPR001279,UniProtKB%2FTrEMBL:Q9ZC82,Genbank:YP_002346965.1,GeneID:1174817;gbkey=CDS;product=hypothetical protein;protein_id=YP_002346965.1;transl_table=11
NC_003143.1	RefSeq	gene	2249435	2250721	.	+	.	ID=gene1915;Name=YPO1981;Dbxref=GeneID:1174818;gbkey=Gene;locus_tag=YPO1981
NC_003143.1	RefSeq	CDS	2249435	2250721	.	+	0	ID=cds1826;Name=YP_002346966.1;Parent=gene1915;Dbxref=InterPro:IPR012685,UniProtKB%2FTrEMBL:Q74UA4,Genbank:YP_002346966.1,GeneID:1174818;gbkey=CDS;product=coenzyme synthetase;protein_id=YP_002346966.1;transl_table=11
NC_003143.1	RefSeq	gene	2250855	2251817	.	+	.	ID=gene1916;Name=YPO1982;Dbxref=GeneID:1174819;gbkey=Gene;locus_tag=YPO1982
NC_003143.1	RefSeq	CDS	2250855	2251817	.	+	0	ID=cds1827;Name=YP_002346967.1;Parent=gene1916;Dbxref=InterPro:IPR001509,UniProtKB%2FTrEMBL:Q7CI79,Genbank:YP_002346967.1,GeneID:1174819;gbkey=CDS;product=dehydrogenase;protein_id=YP_002346967.1;transl_table=11
NC_003143.1	RefSeq	gene	2251817	2252971	.	+	.	ID=gene1917;Name=YPO1983;Dbxref=GeneID:1174820;gbkey=Gene;locus_tag=YPO1983
NC_003143.1	RefSeq	CDS	2251817	2252971	.	+	0	ID=cds1828;Name=YP_002346968.1;Parent=gene1917;Dbxref=UniProtKB%2FTrEMBL:Q0WFH0,Genbank:YP_002346968.1,GeneID:1174820;gbkey=CDS;product=glycosyl transferase;protein_id=YP_002346968.1;transl_table=11
NC_003143.1	RefSeq	gene	2252968	2253552	.	+	.	ID=gene1918;Name=YPO1984;Dbxref=GeneID:1174821;gbkey=Gene;locus_tag=YPO1984
NC_003143.1	RefSeq	CDS	2252968	2253552	.	+	0	ID=cds1829;Name=YP_002346969.1;Parent=gene1918;Note=Doubtful CDS. No significant database hits;Dbxref=UniProtKB%2FTrEMBL:Q7CI80,Genbank:YP_002346969.1,GeneID:1174821;gbkey=CDS;product=hypothetical protein;protein_id=YP_002346969.1;transl_table=11
NC_003143.1	RefSeq	gene	2253549	2254736	.	+	.	ID=gene1919;Name=YPO1985;Dbxref=GeneID:1174822;gbkey=Gene;locus_tag=YPO1985
NC_003143.1	RefSeq	CDS	2253549	2254736	.	+	0	ID=cds1830;Name=YP_002346970.1;Parent=gene1919;Dbxref=InterPro:IPR002213,UniProtKB%2FTrEMBL:Q7CI81,Genbank:YP_002346970.1,GeneID:1174822;gbkey=CDS;product=glycosyl transferase;protein_id=YP_002346970.1;transl_table=11
NC_003143.1	RefSeq	gene	2254897	2255361	.	-	.	ID=gene1920;Name=YPO1986;Dbxref=GeneID:1174823;gbkey=Gene;locus_tag=YPO1986
NC_003143.1	RefSeq	CDS	2254897	2255361	.	-	0	ID=cds1831;Name=YP_002346971.1;Parent=gene1920;Dbxref=UniProtKB%2FTrEMBL:Q7CI82,Genbank:YP_002346971.1,GeneID:1174823;gbkey=CDS;product=hypothetical protein;protein_id=YP_002346971.1;transl_table=11
NC_003143.1	RefSeq	gene	2255531	2257189	.	-	.	ID=gene1921;Name=YPO1987;Dbxref=GeneID:1174824;gbkey=Gene;locus_tag=YPO1987
NC_003143.1	RefSeq	CDS	2255531	2257189	.	-	0	ID=cds1832;Name=YP_002346972.1;Parent=gene1921;Note=No significant database hits;Dbxref=InterPro:IPR011990,UniProtKB%2FTrEMBL:Q7CI83,Genbank:YP_002346972.1,GeneID:1174824;gbkey=CDS;product=hypothetical protein;protein_id=YP_002346972.1;transl_table=11
NC_003143.1	RefSeq	repeat_region	2257237	2258551	.	+	.	ID=id1349;Note=insertion sequence:IS285;gbkey=repeat_region
NC_003143.1	RefSeq	repeat_region	2257237	2257265	.	+	.	ID=id1350;Note=IS285 inverted repeat;gbkey=repeat_region
NC_003143.1	RefSeq	gene	2257308	2258516	.	+	.	ID=gene1922;Name=y1062;Dbxref=GeneID:1174825;gbkey=Gene;gene=y1062;gene_synonym=ypmt1.80C;locus_tag=YPO1988
NC_003143.1	RefSeq	CDS	2257308	2258516	.	+	0	ID=cds1833;Name=YP_002346973.1;Parent=gene1922;Dbxref=InterPro:IPR001207,UniProtKB%2FTrEMBL:Q7ARB0,Genbank:YP_002346973.1,GeneID:1174825;gbkey=CDS;gene=y1062;product=transposase for the IS285 insertion element;protein_id=YP_002346973.1;transl_table=11
NC_003143.1	RefSeq	region	2258001	2258075	.	+	.	ID=id1351;Note=PS01007 Transposases%2C Mutator family%2C signature.;Dbxref=GeneID:1174825;gbkey=misc_feature;gene=y1062
NC_003143.1	RefSeq	repeat_region	2258523	2258551	.	-	.	ID=id1352;Note=IS285 inverted repeat;gbkey=repeat_region
NC_003143.1	RefSeq	gene	2258636	2260798	.	-	.	ID=gene1923;Name=YPO1989;Dbxref=GeneID:1174826;gbkey=Gene;locus_tag=YPO1989
NC_003143.1	RefSeq	CDS	2258636	2260798	.	-	0	ID=cds1834;Name=YP_002346974.1;Parent=gene1923;Dbxref=InterPro:IPR006597,InterPro:IPR011652,InterPro:IPR011990,UniProtKB%2FTrEMBL:Q7CI85,Genbank:YP_002346974.1,GeneID:1174826;gbkey=CDS;product=hypothetical protein;protein_id=YP_002346974.1;transl_table=11
NC_003143.1	RefSeq	gene	2261376	2263487	.	+	.	ID=gene1924;Name=YPO1990;Dbxref=GeneID:1174827;gbkey=Gene;locus_tag=YPO1990
NC_003143.1	RefSeq	CDS	2261376	2263487	.	+	0	ID=cds1835;Name=YP_002346975.1;Parent=gene1924;Dbxref=InterPro:IPR006597,InterPro:IPR011990,UniProtKB%2FTrEMBL:Q0WFG3,Genbank:YP_002346975.1,GeneID:1174827;gbkey=CDS;product=hypothetical protein;protein_id=YP_002346975.1;transl_table=11
NC_003143.1	RefSeq	gene	2263734	2264372	.	+	.	ID=gene1925;Name=YPO1991;Dbxref=GeneID:1174828;gbkey=Gene;locus_tag=YPO1991
NC_003143.1	RefSeq	CDS	2263734	2264372	.	+	0	ID=cds1836;Name=YP_002346976.1;Parent=gene1925;Dbxref=InterPro:IPR010553,UniProtKB%2FTrEMBL:Q7CI86,Genbank:YP_002346976.1,GeneID:1174828;gbkey=CDS;product=hypothetical protein;protein_id=YP_002346976.1;transl_table=11
NC_003143.1	RefSeq	gene	2264507	2265166	.	-	.	ID=gene1926;Name=YPO1992;Dbxref=GeneID:1174829;gbkey=Gene;locus_tag=YPO1992
NC_003143.1	RefSeq	CDS	2264507	2265166	.	-	0	ID=cds1837;Name=YP_002346977.1;Parent=gene1926;Dbxref=InterPro:IPR013217,UniProtKB%2FTrEMBL:Q7CI87,Genbank:YP_002346977.1,GeneID:1174829;gbkey=CDS;product=hypothetical protein;protein_id=YP_002346977.1;transl_table=11
NC_003143.1	RefSeq	gene	2265271	2265951	.	-	.	ID=gene1927;Name=YPO1993;Dbxref=GeneID:1174830;gbkey=Gene;locus_tag=YPO1993
NC_003143.1	RefSeq	CDS	2265271	2265951	.	-	0	ID=cds1838;Name=YP_002346978.1;Parent=gene1927;Dbxref=InterPro:IPR002198,InterPro:IPR002347,UniProtKB%2FTrEMBL:Q7CI88,Genbank:YP_002346978.1,GeneID:1174830;gbkey=CDS;product=dehydrogenase;protein_id=YP_002346978.1;transl_table=11
NC_003143.1	RefSeq	region	2265451	2265537	.	-	.	ID=id1353;Note=PS00061 Short-chain dehydrogenases%2Freductases family signature.;Dbxref=GeneID:1174830;gbkey=misc_feature
NC_003143.1	RefSeq	gene	2266292	2267242	.	-	.	ID=gene1928;Name=YPO1994;Dbxref=GeneID:1174831;gbkey=Gene;locus_tag=YPO1994
NC_003143.1	RefSeq	CDS	2266292	2267242	.	-	0	ID=cds1839;Name=YP_002346979.1;Parent=gene1928;Dbxref=UniProtKB%2FTrEMBL:Q7CI89,Genbank:YP_002346979.1,GeneID:1174831;gbkey=CDS;product=hypothetical protein;protein_id=YP_002346979.1;transl_table=11
NC_003143.1	RefSeq	gene	2267229	2268161	.	-	.	ID=gene1929;Name=YPO1995;Dbxref=GeneID:1174832;gbkey=Gene;locus_tag=YPO1995
NC_003143.1	RefSeq	CDS	2267229	2268161	.	-	0	ID=cds1840;Name=YP_002346980.1;Parent=gene1929;Dbxref=UniProtKB%2FTrEMBL:Q7CI90,Genbank:YP_002346980.1,GeneID:1174832;gbkey=CDS;product=hypothetical protein;protein_id=YP_002346980.1;transl_table=11
NC_003143.1	RefSeq	gene	2268167	2269072	.	-	.	ID=gene1930;Name=YPO1996;Dbxref=GeneID:1174833;gbkey=Gene;locus_tag=YPO1996
NC_003143.1	RefSeq	CDS	2268167	2269072	.	-	0	ID=cds1841;Name=YP_002346981.1;Parent=gene1930;Note=No significant database hits;Dbxref=UniProtKB%2FTrEMBL:Q7CI91,Genbank:YP_002346981.1,GeneID:1174833;gbkey=CDS;product=hypothetical protein;protein_id=YP_002346981.1;transl_table=11
NC_003143.1	RefSeq	gene	2269863	2270936	.	-	.	ID=gene1931;Name=YPO1997;Dbxref=GeneID:1174834;gbkey=Gene;locus_tag=YPO1997
NC_003143.1	RefSeq	CDS	2269863	2270936	.	-	0	ID=cds1842;Name=YP_002346982.1;Parent=gene1931;Dbxref=UniProtKB%2FTrEMBL:Q7CI92,Genbank:YP_002346982.1,GeneID:1174834;gbkey=CDS;product=hypothetical protein;protein_id=YP_002346982.1;transl_table=11
NC_003143.1	RefSeq	gene	2271149	2271619	.	-	.	ID=gene1932;Name=YPO1998;Dbxref=GeneID:1174835;gbkey=Gene;locus_tag=YPO1998
NC_003143.1	RefSeq	CDS	2271149	2271619	.	-	0	ID=cds1843;Name=YP_002346983.1;Parent=gene1932;Dbxref=InterPro:IPR011051,InterPro:IPR013096,UniProtKB%2FTrEMBL:Q7CI93,Genbank:YP_002346983.1,GeneID:1174835;gbkey=CDS;product=hypothetical protein;protein_id=YP_002346983.1;transl_table=11
NC_003143.1	RefSeq	gene	2271674	2272096	.	-	.	ID=gene1933;Name=YPO1999;Dbxref=GeneID:1174836;gbkey=Gene;locus_tag=YPO1999
NC_003143.1	RefSeq	CDS	2271674	2272096	.	-	0	ID=cds1844;Name=YP_002346984.1;Parent=gene1933;Dbxref=InterPro:IPR003779,UniProtKB%2FTrEMBL:Q74U89,Genbank:YP_002346984.1,GeneID:1174836;gbkey=CDS;product=decarboxylase;protein_id=YP_002346984.1;transl_table=11
NC_003143.1	RefSeq	gene	2272373	2273764	.	-	.	ID=gene1934;Name=YPO2000;Dbxref=GeneID:1174837;gbkey=Gene;locus_tag=YPO2000
NC_003143.1	RefSeq	CDS	2272373	2273764	.	-	0	ID=cds1845;Name=YP_002346985.1;Parent=gene1934;Dbxref=InterPro:IPR003594,InterPro:IPR003660,InterPro:IPR003661,InterPro:IPR005467,InterPro:IPR006290,InterPro:IPR009082,UniProtKB%2FTrEMBL:Q0WFF3,Genbank:YP_002346985.1,GeneID:1174837;gbkey=CDS;product=two-component system sensor protein;protein_id=YP_002346985.1;transl_table=11
NC_003143.1	RefSeq	gene	2273770	2274462	.	-	.	ID=gene1935;Name=copR;Dbxref=GeneID:1174838;gbkey=Gene;gene=copR;locus_tag=YPO2001
NC_003143.1	RefSeq	CDS	2273770	2274462	.	-	0	ID=cds1846;Name=YP_002346986.1;Parent=gene1935;Dbxref=InterPro:IPR001789,InterPro:IPR001867,InterPro:IPR006291,InterPro:IPR011006,InterPro:IPR011991,UniProtKB%2FTrEMBL:Q7CI94,Genbank:YP_002346986.1,GeneID:1174838;gbkey=CDS;gene=copR;product=transcriptional activator;protein_id=YP_002346986.1;transl_table=11
NC_003143.1	RefSeq	ribosome_entry_site	2274471	2274474	.	-	.	ID=id1354;gbkey=RBS
NC_003143.1	RefSeq	ribosome_entry_site	2274713	2274716	.	+	.	ID=id1355;gbkey=RBS
NC_003143.1	RefSeq	gene	2274727	2275818	.	+	.	ID=gene1936;Name=YPO2002;Dbxref=GeneID:1174839;gbkey=Gene;locus_tag=YPO2002
NC_003143.1	RefSeq	CDS	2274727	2275818	.	+	0	ID=cds1847;Name=YP_002346987.1;Parent=gene1936;Dbxref=InterPro:IPR002925,UniProtKB%2FTrEMBL:Q7CI95,Genbank:YP_002346987.1,GeneID:1174839;gbkey=CDS;product=hypothetical protein;protein_id=YP_002346987.1;transl_table=11
NC_003143.1	RefSeq	repeat_region	2274741	2274783	.	+	.	ID=id1356;Note=repeat region with 2.5xTTTTAAAACGACATCCGT repeats.;Dbxref=GeneID:1174839;gbkey=repeat_region
NC_003143.1	RefSeq	region	2275504	2275527	.	+	.	ID=id1357;Note=PS00017 ATP%2FGTP-binding site motif A %28P-loop%29.;Dbxref=GeneID:1174839;gbkey=misc_feature
NC_003143.1	RefSeq	gene	2275967	2276674	.	+	.	ID=gene1937;Name=YPO2003;Dbxref=GeneID:1174840;gbkey=Gene;locus_tag=YPO2003
NC_003143.1	RefSeq	CDS	2275967	2276674	.	+	0	ID=cds1848;Name=YP_002346988.1;Parent=gene1937;Note=An electron-transfer protein%3B flavodoxin binds one FMN molecule%2C which serves as a redox-active prosthetic group;Dbxref=UniProtKB%2FTrEMBL:Q7CI96,Genbank:YP_002346988.1,GeneID:1174840;gbkey=CDS;product=flavodoxin;protein_id=YP_002346988.1;transl_table=11
NC_003143.1	RefSeq	gene	2276689	2277384	.	+	.	ID=gene1938;Name=YPO2004;Dbxref=GeneID:1174841;gbkey=Gene;locus_tag=YPO2004
NC_003143.1	RefSeq	CDS	2276689	2277384	.	+	0	ID=cds1849;Name=YP_002346989.1;Parent=gene1938;Dbxref=UniProtKB%2FTrEMBL:Q7CI97,Genbank:YP_002346989.1,GeneID:1174841;gbkey=CDS;product=hypothetical protein;protein_id=YP_002346989.1;transl_table=11
NC_003143.1	RefSeq	gene	2277593	2278435	.	-	.	ID=gene1939;Name=YPO2005;Dbxref=GeneID:1174842;gbkey=Gene;locus_tag=YPO2005
NC_003143.1	RefSeq	CDS	2277593	2278435	.	-	0	ID=cds1850;Name=YP_002346990.1;Parent=gene1939;Dbxref=UniProtKB%2FTrEMBL:Q0WFE8,Genbank:YP_002346990.1,GeneID:1174842;gbkey=CDS;product=hypothetical protein;protein_id=YP_002346990.1;transl_table=11
NC_003143.1	RefSeq	ribosome_entry_site	2278442	2278446	.	-	.	ID=id1358;gbkey=RBS
NC_003143.1	RefSeq	gene	2279186	2279722	.	+	.	ID=gene1940;Name=YPO2006;Dbxref=GeneID:1174843;gbkey=Gene;locus_tag=YPO2006
NC_003143.1	RefSeq	CDS	2279186	2279722	.	+	0	ID=cds1851;Name=YP_002346991.1;Parent=gene1940;Note=No significant database hits;Dbxref=UniProtKB%2FTrEMBL:Q0WFE7,Genbank:YP_002346991.1,GeneID:1174843;gbkey=CDS;product=hypothetical protein;protein_id=YP_002346991.1;transl_table=11
NC_003143.1	RefSeq	ribosome_entry_site	2279708	2279712	.	+	.	ID=id1359;Dbxref=GeneID:1174843;gbkey=RBS
NC_003143.1	RefSeq	gene	2279719	2280549	.	+	.	ID=gene1941;Name=YPO2007;Dbxref=GeneID:1174844;gbkey=Gene;locus_tag=YPO2007
NC_003143.1	RefSeq	CDS	2279719	2280549	.	+	0	ID=cds1852;Name=YP_002346992.1;Parent=gene1941;Dbxref=InterPro:IPR013094,UniProtKB%2FTrEMBL:Q7CI98,Genbank:YP_002346992.1,GeneID:1174844;gbkey=CDS;product=esterase;protein_id=YP_002346992.1;transl_table=11
NC_003143.1	RefSeq	ribosome_entry_site	2280548	2280552	.	+	.	ID=id1360;gbkey=RBS
NC_003143.1	RefSeq	gene	2280557	2280955	.	+	.	ID=gene1942;Name=YPO2008;Dbxref=GeneID:1174845;gbkey=Gene;locus_tag=YPO2008
NC_003143.1	RefSeq	CDS	2280557	2280955	.	+	0	ID=cds1853;Name=YP_002346993.1;Parent=gene1942;Dbxref=InterPro:IPR001763,UniProtKB%2FTrEMBL:Q0WFE5,Genbank:YP_002346993.1,GeneID:1174845;gbkey=CDS;product=rhodanese-like protein;protein_id=YP_002346993.1;transl_table=11
NC_003143.1	RefSeq	gene	2281003	2281512	.	-	.	ID=gene1943;Name=YPO2009;Dbxref=GeneID:1174846;gbkey=Gene;locus_tag=YPO2009
NC_003143.1	RefSeq	CDS	2281003	2281512	.	-	0	ID=cds1854;Name=YP_002346994.1;Parent=gene1943;Dbxref=InterPro:IPR001584,InterPro:IPR012337,UniProtKB%2FTrEMBL:Q7CI99,Genbank:YP_002346994.1,GeneID:1174846;gbkey=CDS;product=integrase core domain-containing protein;protein_id=YP_002346994.1;transl_table=11
NC_003143.1	RefSeq	gene	2281530	2281931	.	-	.	ID=gene1944;Name=YPO2009a;Dbxref=GeneID:1174847;gbkey=Gene;locus_tag=YPO2009a;pseudo=true
NC_003143.1	RefSeq	gene	2282141	2283232	.	-	.	ID=gene1945;Name=ychF;Dbxref=GeneID:1174848;gbkey=Gene;gene=ychF;locus_tag=YPO2010
NC_003143.1	RefSeq	CDS	2282141	2283232	.	-	0	ID=cds1855;Name=YP_002346996.1;Parent=gene1945;Note=translation-associated GTPase%3B the crystal structure of the Haemophilus influenzae YchF protein showed similarity to the yeast structure %28PDB: 1NI3%29%3B fluorescence spectroscopy revealed nucleic acid binding%3B the yeast protein YBR025c interacts with the translation elongation factor eEF1;Dbxref=InterPro:IPR000583,InterPro:IPR002917,InterPro:IPR004396,InterPro:IPR006073,InterPro:IPR012676,InterPro:IPR013029,UniProtKB%2FTrEMBL:Q7CIA0,Genbank:YP_002346996.1,GeneID:1174848;gbkey=CDS;gene=ychF;product=GTP-dependent nucleic acid-binding protein EngD;protein_id=YP_002346996.1;transl_table=11
NC_003143.1	RefSeq	region	2283185	2283208	.	-	.	ID=id1361;Note=PS00017 ATP%2FGTP-binding site motif A %28P-loop%29.;Dbxref=GeneID:1174848;gbkey=misc_feature;gene=ychF
NC_003143.1	RefSeq	gene	2283396	2283986	.	-	.	ID=gene1946;Name=pth;Dbxref=GeneID:1174849;gbkey=Gene;gene=pth;locus_tag=YPO2011
NC_003143.1	RefSeq	CDS	2283396	2283986	.	-	0	ID=cds1856;Name=YP_002346997.1;Parent=gene1946;Note=Enables the recycling of peptidyl-tRNAs produced at termination of translation;Dbxref=InterPro:IPR001328,UniProtKB%2FTrEMBL:Q0WFE1,Genbank:YP_002346997.1,GeneID:1174849;gbkey=CDS;gene=pth;product=peptidyl-tRNA hydrolase;protein_id=YP_002346997.1;transl_table=11
NC_003143.1	RefSeq	region	2283624	2283656	.	-	.	ID=id1362;Note=PS01196 Peptidyl-tRNA hydrolase signature 2.;Dbxref=GeneID:1174849;gbkey=misc_feature;gene=pth
NC_003143.1	RefSeq	ribosome_entry_site	2284337	2284344	.	+	.	ID=id1363;gbkey=RBS
NC_003143.1	RefSeq	gene	2284348	2284620	.	+	.	ID=gene1947;Name=YPO2012;Dbxref=GeneID:1174850;gbkey=Gene;locus_tag=YPO2012
NC_003143.1	RefSeq	CDS	2284348	2284620	.	+	0	ID=cds1857;Name=YP_002346998.1;Parent=gene1947;Note=YchH%3B transcription activated by CRP %28cyclic AMP receptor protein%29%2C a global transcription factor involved in regulation of metabolism in enteric bacteria%3B ychH presents a class II promoter to bind CRP%3B unknown function;Dbxref=UniProtKB%2FTrEMBL:Q7CIA1,Genbank:YP_002346998.1,GeneID:1174850;gbkey=CDS;product=hypothetical protein;protein_id=YP_002346998.1;transl_table=11
NC_003143.1	RefSeq	gene	2284822	2285769	.	-	.	ID=gene1948;Name=prsA;Dbxref=GeneID:1174851;gbkey=Gene;gene=prsA;locus_tag=YPO2013
NC_003143.1	RefSeq	CDS	2284822	2285769	.	-	0	ID=cds1858;Name=YP_002346999.1;Parent=gene1948;Note=catalyzes the formation of 5-phospho-alpha-D-ribose 1-phosphate from D-ribose 5-phosphate and ATP;Dbxref=InterPro:IPR000836,InterPro:IPR000842,InterPro:IPR002375,InterPro:IPR005946,UniProtKB%2FTrEMBL:Q0WFD9,Genbank:YP_002346999.1,GeneID:1174851;gbkey=CDS;gene=prsA;product=ribose-phosphate pyrophosphokinase;protein_id=YP_002346999.1;transl_table=11
NC_003143.1	RefSeq	region	2285086	2285124	.	-	.	ID=id1364;Note=PS00103 Purine%2Fpyrimidine phosphoribosyl transferases signature.;Dbxref=GeneID:1174851;gbkey=misc_feature;gene=prsA
NC_003143.1	RefSeq	region	2285338	2285385	.	-	.	ID=id1365;Note=PS00114 Phosphoribosyl pyrophosphate synthetase signature.;Dbxref=GeneID:1174851;gbkey=misc_feature;gene=prsA
NC_003143.1	RefSeq	region	2285386	2285415	.	-	.	ID=id1366;Note=PS00339 Aminoacyl-transfer RNA synthetases class-II signature 2.;Dbxref=GeneID:1174851;gbkey=misc_feature;gene=prsA
NC_003143.1	RefSeq	ribosome_entry_site	2285778	2285781	.	-	.	ID=id1367;gbkey=RBS
NC_003143.1	RefSeq	gene	2286110	2287009	.	-	.	ID=gene1949;Name=ipk;Dbxref=GeneID:1174852;gbkey=Gene;gene=ipk;locus_tag=YPO2014
NC_003143.1	RefSeq	CDS	2286110	2287009	.	-	0	ID=cds1859;Name=YP_002347000.1;Parent=gene1949;Note=An essential enzyme in the nonmevalonate pathway of isopentenyl diphosphate and dimethylallyl diphosphate biosynthesis;Dbxref=InterPro:IPR004424,InterPro:IPR006204,InterPro:IPR013750,UniProtKB%2FTrEMBL:Q0WFD8,Genbank:YP_002347000.1,GeneID:1174852;gbkey=CDS;gene=ipk;product=4-diphosphocytidyl-2-C-methyl-D-erythritol kinase;protein_id=YP_002347000.1;transl_table=11
NC_003143.1	RefSeq	gene	2287011	2287634	.	-	.	ID=gene1950;Name=lolB;Dbxref=GeneID:1174853;gbkey=Gene;gene=lolB;locus_tag=YPO2015
NC_003143.1	RefSeq	CDS	2287011	2287634	.	-	0	ID=cds1860;Name=YP_002347001.1;Parent=gene1950;Note=Incorporates lipoproteins in the outer membrane after they are released by the LolA protein;Dbxref=InterPro:IPR004565,UniProtKB%2FTrEMBL:Q0WFD7,Genbank:YP_002347001.1,GeneID:1174853;gbkey=CDS;gene=lolB;product=molecular chaperone LolB;protein_id=YP_002347001.1;transl_table=11
NC_003143.1	RefSeq	region	2287569	2287601	.	-	.	ID=id1368;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site.;Dbxref=GeneID:1174853;gbkey=misc_feature;gene=lolB
NC_003143.1	RefSeq	gene	2287940	2289202	.	+	.	ID=gene1951;Name=hemA;Dbxref=GeneID:1174854;gbkey=Gene;gene=hemA;locus_tag=YPO2016
NC_003143.1	RefSeq	CDS	2287940	2289202	.	+	0	ID=cds1861;Name=YP_002347002.1;Parent=gene1951;Note=catalyzes the formation of glutamate-1-semialdehyde from glutamyl-tRNA%28Glu%29 and NADPH%3B the second step of the pathway is catalyzed by glutamate-1-semialdehyde aminomutase which results in the formation of 5-aminolevulinic acid%3B functions in porphyrin %28tetrapyrroles%29 biosynthesis%3B the crystal structure showed a C-terminal dimerization domain that appears to be absent in Chlamydial proteins;Dbxref=InterPro:IPR000343,InterPro:IPR003462,InterPro:IPR006151,UniProtKB%2FTrEMBL:Q0WFD6,Genbank:YP_002347002.1,GeneID:1174854;gbkey=CDS;gene=hemA;product=glutamyl-tRNA reductase;protein_id=YP_002347002.1;transl_table=11
NC_003143.1	RefSeq	gene	2289235	2290317	.	+	.	ID=gene1952;Name=prfA;Dbxref=GeneID:1174855;gbkey=Gene;gene=prfA;gene_synonym=sueB,uar;locus_tag=YPO2017
NC_003143.1	RefSeq	CDS	2289235	2290317	.	+	0	ID=cds1862;Name=YP_002347003.1;Parent=gene1952;Note=recognizes the termination signals UAG and UAA during protein translation a specificity which is dependent on amino acid residues residing in loops of the L-shaped tRNA-like molecule of RF1%3B this protein is similar to release factor 2;Dbxref=InterPro:IPR000352,InterPro:IPR004373,InterPro:IPR005139,InterPro:IPR012086,UniProtKB%2FTrEMBL:Q0WFD5,Genbank:YP_002347003.1,GeneID:1174855;gbkey=CDS;gene=prfA;product=peptide chain release factor 1;protein_id=YP_002347003.1;transl_table=11
NC_003143.1	RefSeq	region	2289916	2289966	.	+	.	ID=id1369;Note=PS00745 Prokaryotic-type class I peptide chain release factors signature.;Dbxref=GeneID:1174855;gbkey=misc_feature;gene=prfA
NC_003143.1	RefSeq	gene	2290317	2291147	.	+	.	ID=gene1953;Name=prfA;Dbxref=GeneID:1174856;gbkey=Gene;gene=prfA;locus_tag=YPO2018
NC_003143.1	RefSeq	CDS	2290317	2291147	.	+	0	ID=cds1863;Name=YP_002347004.1;Parent=gene1953;Note=HemK%3B PrmC%3B transfers a methyl group from S-adenosylmethionine to amide nitrogen of specific glutamine residues in protein chain release factors PrfA and PrfB;Dbxref=InterPro:IPR002052,InterPro:IPR004556,InterPro:IPR013217,UniProtKB%2FTrEMBL:Q7CIA2,Genbank:YP_002347004.1,GeneID:1174856;gbkey=CDS;product=N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase;protein_id=YP_002347004.1;transl_table=11
NC_003143.1	RefSeq	gene	2291211	2291612	.	+	.	ID=gene1954;Name=YPO2019;Dbxref=GeneID:1174857;gbkey=Gene;locus_tag=YPO2019
NC_003143.1	RefSeq	CDS	2291211	2291612	.	+	0	ID=cds1864;Name=YP_002347005.1;Parent=gene1954;Dbxref=InterPro:IPR007360,UniProtKB%2FTrEMBL:Q7CIA3,Genbank:YP_002347005.1,GeneID:1174857;gbkey=CDS;product=hypothetical protein;protein_id=YP_002347005.1;transl_table=11
NC_003143.1	RefSeq	gene	2291609	2292418	.	+	.	ID=gene1955;Name=YPO2020;Dbxref=GeneID:1174858;gbkey=Gene;locus_tag=YPO2020
NC_003143.1	RefSeq	CDS	2291609	2292418	.	+	0	ID=cds1865;Name=YP_002347006.1;Parent=gene1955;Dbxref=InterPro:IPR011990,UniProtKB%2FTrEMBL:Q7CIA4,Genbank:YP_002347006.1,GeneID:1174858;gbkey=CDS;product=transcriptional regulator;protein_id=YP_002347006.1;transl_table=11
NC_003143.1	RefSeq	gene	2292514	2293368	.	+	.	ID=gene1956;Name=kdsA;Dbxref=GeneID:1174859;gbkey=Gene;gene=kdsA;locus_tag=YPO2021
NC_003143.1	RefSeq	CDS	2292514	2293368	.	+	0	ID=cds1866;Name=YP_002347007.1;Parent=gene1956;Note=catalyzes the formation of 2-dehydro-3-deoxy-D-octonate 8-phosphate from phosphoenolpyruvate and D-arabinose 5-phosphate in LPS biosynthesis;Dbxref=InterPro:IPR006218,InterPro:IPR006269,UniProtKB%2FTrEMBL:Q0WFD1,Genbank:YP_002347007.1,GeneID:1174859;gbkey=CDS;gene=kdsA;product=2-dehydro-3-deoxyphosphooctonate aldolase;protein_id=YP_002347007.1;transl_table=11
NC_003143.1	RefSeq	repeat_region	2293705	2294416	.	+	.	ID=id1370;Note=Contains a %27G%27 at nucleotide position 315%7EIS200-like insertion sequence:IS1541;gbkey=repeat_region
NC_003143.1	RefSeq	gene	2293850	2294308	.	+	.	ID=gene1957;Name=tnp;Dbxref=GeneID:1174860;gbkey=Gene;gene=tnp;locus_tag=YPO2023
NC_003143.1	RefSeq	CDS	2293850	2294308	.	+	0	ID=cds1867;Name=YP_002347008.1;Parent=gene1957;Dbxref=InterPro:IPR002686,UniProtKB%2FTrEMBL:Q74YM6,Genbank:YP_002347008.1,GeneID:1174860;gbkey=CDS;gene=tnp;product=transposase for the IS1541 insertion element;protein_id=YP_002347008.1;transl_table=11
NC_003143.1	RefSeq	region	2296817	2298088	.	-	.	ID=id1371;Note=Similar to Escherichia coli hypothetical protein YchM SW:YCHM_ECOLI %28P40877%29 %28550 aa%29 fasta scores: E%28%29: 7.4e-159%2C 71.558%25 id in 552 aa%2C and to Pasteurella multocida hypothetical protein PM0948 TR:Q9CM88 %28EMBL:AE006134%29 %28569 aa%29 fasta scores: E%28%29: 9.3e-127%2C57.651%25 id in 562 aa. CDS disrupted by the insertion sequence IS100 after codon 424.;Dbxref=PSEUDO:CAL20660.1;gbkey=misc_feature;part=1%2F2;pseudo=true
NC_003143.1	RefSeq	region	2294432	2294857	.	-	.	ID=id1371;Note=Similar to Escherichia coli hypothetical protein YchM SW:YCHM_ECOLI %28P40877%29 %28550 aa%29 fasta scores: E%28%29: 7.4e-159%2C 71.558%25 id in 552 aa%2C and to Pasteurella multocida hypothetical protein PM0948 TR:Q9CM88 %28EMBL:AE006134%29 %28569 aa%29 fasta scores: E%28%29: 9.3e-127%2C57.651%25 id in 562 aa. CDS disrupted by the insertion sequence IS100 after codon 424.;Dbxref=PSEUDO:CAL20660.1;gbkey=misc_feature;part=2%2F2;pseudo=true
NC_003143.1	RefSeq	repeat_region	2294862	2296815	.	-	.	ID=id1372;Note=insertion sequence:IS100;gbkey=repeat_region
NC_003143.1	RefSeq	repeat_region	2294862	2294889	.	+	.	ID=id1373;Note=IS100 inverted repeat;gbkey=repeat_region
NC_003143.1	RefSeq	gene	2294928	2295710	.	-	.	ID=gene1958;Name=YPO2025;Note=ypmt1.57c;Dbxref=GeneID:1174862;gbkey=Gene;locus_tag=YPO2025
NC_003143.1	RefSeq	CDS	2294928	2295710	.	-	0	ID=cds1868;Name=YP_002347009.1;Parent=gene1958;Dbxref=InterPro:IPR001270,InterPro:IPR002611,InterPro:IPR003593,UniProtKB%2FTrEMBL:Q7ARK4,Genbank:YP_002347009.1,GeneID:1174862;gbkey=CDS;product=transposase%2FIS protein;protein_id=YP_002347009.1;transl_table=11
NC_003143.1	RefSeq	region	2295360	2295383	.	-	.	ID=id1374;Note=PS00017 ATP%2FGTP-binding site motif A %28P-loop%29.;Dbxref=GeneID:1174862;gbkey=misc_feature
NC_003143.1	RefSeq	gene	2295707	2296729	.	-	.	ID=gene1959;Name=y1093;Dbxref=GeneID:1174863;gbkey=Gene;gene=y1093;gene_synonym=ypmt1;locus_tag=YPO2026
NC_003143.1	RefSeq	CDS	2295707	2296729	.	-	0	ID=cds1869;Name=YP_002347010.1;Parent=gene1959;Dbxref=InterPro:IPR001584,InterPro:IPR006120,InterPro:IPR009057,InterPro:IPR012287,InterPro:IPR012337,UniProtKB%2FTrEMBL:Q7ARN5,Genbank:YP_002347010.1,GeneID:1174863;gbkey=CDS;gene=y1093;product=transposase for insertion sequence IS100;protein_id=YP_002347010.1;transl_table=11
NC_003143.1	RefSeq	region	2296613	2296678	.	-	.	ID=id1375;Note=Predicted helix-turn-helix motif with score 2147 %28%2B6.50 SD%29 at aa 18-39%2C sequence MSSRAIARELGISRNTVKRYLQ;Dbxref=GeneID:1174863;gbkey=misc_feature;gene=y1093
NC_003143.1	RefSeq	repeat_region	2296788	2296815	.	-	.	ID=id1376;Note=IS100 inverted repeat;gbkey=repeat_region
NC_003143.1	RefSeq	region	2297852	2297917	.	-	.	ID=id1377;Note=PS01130 Sulfate transporters signature.;gbkey=misc_feature
NC_003143.1	RefSeq	gene	2298924	2299013	.	-	.	ID=gene1960;Name=YPt_27;Dbxref=GeneID:1174865;gbkey=Gene;locus_tag=YPt_27
NC_003143.1	RefSeq	tRNA	2298924	2299013	.	-	.	ID=rna40;Parent=gene1960;Note=tRNA Ser anticodon GGA%2C Cove score 59.10;Dbxref=GeneID:1174865;gbkey=tRNA;product=tRNA-Ser
NC_003143.1	RefSeq	exon	2298924	2299013	.	-	.	ID=id1378;Parent=rna40;Note=tRNA Ser anticodon GGA%2C Cove score 59.10;Dbxref=GeneID:1174865;gbkey=tRNA;product=tRNA-Ser
NC_003143.1	RefSeq	gene	2299155	2300030	.	-	.	ID=gene1961;Name=YPO2028;Dbxref=GeneID:1174866;gbkey=Gene;locus_tag=YPO2028
NC_003143.1	RefSeq	CDS	2299155	2300030	.	-	0	ID=cds1870;Name=YP_002347012.1;Parent=gene1961;Dbxref=InterPro:IPR004129,UniProtKB%2FTrEMBL:Q7CIA5,Genbank:YP_002347012.1,GeneID:1174866;gbkey=CDS;product=hypothetical protein;protein_id=YP_002347012.1;transl_table=11
NC_003143.1	RefSeq	ribosome_entry_site	2300037	2300042	.	-	.	ID=id1379;gbkey=RBS
NC_003143.1	RefSeq	gene	2300331	2301413	.	-	.	ID=gene1962;Name=YPO2029;Dbxref=GeneID:1174867;gbkey=Gene;locus_tag=YPO2029
NC_003143.1	RefSeq	CDS	2300331	2301413	.	-	0	ID=cds1871;Name=YP_002347013.1;Parent=gene1962;Dbxref=InterPro:IPR006059,UniProtKB%2FTrEMBL:Q0WFC5,Genbank:YP_002347013.1,GeneID:1174867;gbkey=CDS;product=hypothetical protein;protein_id=YP_002347013.1;transl_table=11
NC_003143.1	RefSeq	ribosome_entry_site	2301422	2301426	.	-	.	ID=id1380;gbkey=RBS
NC_003143.1	RefSeq	gene	2301433	2302269	.	-	.	ID=gene1963;Name=YPO2030;Dbxref=GeneID:1174868;gbkey=Gene;locus_tag=YPO2030
NC_003143.1	RefSeq	CDS	2301433	2302269	.	-	0	ID=cds1872;Name=YP_002347014.1;Parent=gene1963;Dbxref=InterPro:IPR000515,UniProtKB%2FTrEMBL:Q7CIA6,Genbank:YP_002347014.1,GeneID:1174868;gbkey=CDS;product=binding-protein-dependent transporter membrane protein;protein_id=YP_002347014.1;transl_table=11
NC_003143.1	RefSeq	gene	2302266	2303132	.	-	.	ID=gene1964;Name=YPO2031;Dbxref=GeneID:1174869;gbkey=Gene;locus_tag=YPO2031
NC_003143.1	RefSeq	CDS	2302266	2303132	.	-	0	ID=cds1873;Name=YP_002347015.1;Parent=gene1964;Dbxref=InterPro:IPR000515,UniProtKB%2FTrEMBL:Q7CIA7,Genbank:YP_002347015.1,GeneID:1174869;gbkey=CDS;product=binding-protein-dependent transporter membrane protein;protein_id=YP_002347015.1;transl_table=11
NC_003143.1	RefSeq	ribosome_entry_site	2302277	2302283	.	-	.	ID=id1381;Dbxref=GeneID:1174869;gbkey=RBS
NC_003143.1	RefSeq	gene	2303141	2304921	.	-	.	ID=gene1965;Name=YPO2034;Dbxref=GeneID:1174870;gbkey=Gene;locus_tag=YPO2034;pseudo=true
NC_003143.1	RefSeq	region	2304601	2304921	.	-	.	ID=id1382;Note=Similar to Vibrio cholerae iron %28III%29 transpoter ATP-inding protein VCA0687 TR:Q9KLQ5 %28EMBL:AE004398%29 %28351 aa%29 fasta scores: E%28%29: 0%2C 41.2%25 id in 352 aa%2C and to Vibrio cholerae ABC transporter%2C ATP-binding protein VCA0602 TR:Q9KLY9 %28EMBL:AE004390%29 %28403 aa%29 fasta scores: E%28%29: 9.2e-47%2C 43.831%25 id in 308 aa. N-terminal of CDS is similar to N-terminal region of Yersinia pestis %28369 aa%29 YPO3712 fasta scores: E%28%29: 6.6e-14%2C 51.5%25 id in 101 aa overlap. CDS is disrupted by the insertion of an IS1541 element after codon 107;Dbxref=GeneID:1174870;gbkey=misc_feature;part=1%2F2;pseudo=true
NC_003143.1	RefSeq	region	2303141	2303890	.	-	.	ID=id1382;Note=Similar to Vibrio cholerae iron %28III%29 transpoter ATP-inding protein VCA0687 TR:Q9KLQ5 %28EMBL:AE004398%29 %28351 aa%29 fasta scores: E%28%29: 0%2C 41.2%25 id in 352 aa%2C and to Vibrio cholerae ABC transporter%2C ATP-binding protein VCA0602 TR:Q9KLY9 %28EMBL:AE004390%29 %28403 aa%29 fasta scores: E%28%29: 9.2e-47%2C 43.831%25 id in 308 aa. N-terminal of CDS is similar to N-terminal region of Yersinia pestis %28369 aa%29 YPO3712 fasta scores: E%28%29: 6.6e-14%2C 51.5%25 id in 101 aa overlap. CDS is disrupted by the insertion of an IS1541 element after codon 107;Dbxref=GeneID:1174870;gbkey=misc_feature;part=2%2F2;pseudo=true
NC_003143.1	RefSeq	ribosome_entry_site	2303141	2303144	.	-	.	ID=id1383;Dbxref=GeneID:1174870;gbkey=RBS
NC_003143.1	RefSeq	region	2303753	2303797	.	-	.	ID=id1384;Note=PS00211 ABC transporters family signature.;Dbxref=GeneID:1174870;gbkey=misc_feature
NC_003143.1	RefSeq	repeat_region	2303889	2304600	.	+	.	ID=id1385;Note=Contains a %27A%27 at nucleotide position 315%7EIS200-like insertion sequence:IS1541;gbkey=repeat_region
NC_003143.1	RefSeq	gene	2304034	2304492	.	+	.	ID=gene1966;Name=tnp;Dbxref=GeneID:1174871;gbkey=Gene;gene=tnp;locus_tag=YPO2033
NC_003143.1	RefSeq	CDS	2304034	2304492	.	+	0	ID=cds1874;Name=YP_002347016.1;Parent=gene1966;Dbxref=InterPro:IPR002686,UniProtKB%2FTrEMBL:Q56938,Genbank:YP_002347016.1,GeneID:1174871;gbkey=CDS;gene=tnp;product=transposase for the IS1541 insertion element;protein_id=YP_002347016.1;transl_table=11
NC_003143.1	RefSeq	region	2304778	2304801	.	-	.	ID=id1386;Note=PS00017 ATP%2FGTP-binding site motif A %28P-loop%29.;Dbxref=GeneID:1174870;gbkey=misc_feature
NC_003143.1	RefSeq	gene	2305121	2305951	.	+	.	ID=gene1967;Name=YPO2035;Dbxref=GeneID:1174872;gbkey=Gene;locus_tag=YPO2035
NC_003143.1	RefSeq	CDS	2305121	2305951	.	+	0	ID=cds1875;Name=YP_002347017.1;Parent=gene1967;Dbxref=InterPro:IPR004129,UniProtKB%2FTrEMBL:Q7CIA8,Genbank:YP_002347017.1,GeneID:1174872;gbkey=CDS;product=hypothetical protein;protein_id=YP_002347017.1;transl_table=11
NC_003143.1	RefSeq	ribosome_entry_site	2305956	2305960	.	+	.	ID=id1387;gbkey=RBS
NC_003143.1	RefSeq	gene	2305965	2307077	.	+	.	ID=gene1968;Name=YPO2036;Dbxref=GeneID:1174873;gbkey=Gene;locus_tag=YPO2036
NC_003143.1	RefSeq	CDS	2305965	2307077	.	+	0	ID=cds1876;Name=YP_002347018.1;Parent=gene1968;Dbxref=InterPro:IPR000600,InterPro:IPR011991,UniProtKB%2FTrEMBL:Q0WFC0,Genbank:YP_002347018.1,GeneID:1174873;gbkey=CDS;product=transcriptional regulator;protein_id=YP_002347018.1;transl_table=11
NC_003143.1	RefSeq	region	2306043	2306108	.	+	.	ID=id1388;Note=Predicted helix-turn-helix motif with score 1561 %28%2B4.50 SD%29 at aa 27-48%2C sequence VTRAELARLSNLTAGAITQQCR;Dbxref=GeneID:1174873;gbkey=misc_feature
NC_003143.1	RefSeq	gene	2307334	2307423	.	-	.	ID=gene1969;Name=YPt_28;Dbxref=GeneID:1174874;gbkey=Gene;locus_tag=YPt_28
NC_003143.1	RefSeq	tRNA	2307334	2307423	.	-	.	ID=rna41;Parent=gene1969;Note=tRNA Ser anticodon GGA%2C Cove score 62.70;Dbxref=GeneID:1174874;gbkey=tRNA;product=tRNA-Ser
NC_003143.1	RefSeq	exon	2307334	2307423	.	-	.	ID=id1389;Parent=rna41;Note=tRNA Ser anticodon GGA%2C Cove score 62.70;Dbxref=GeneID:1174874;gbkey=tRNA;product=tRNA-Ser
NC_003143.1	RefSeq	ribosome_entry_site	2307703	2307706	.	+	.	ID=id1390;gbkey=RBS
NC_003143.1	RefSeq	gene	2307712	2308449	.	+	.	ID=gene1970;Name=YPO2037;Dbxref=GeneID:1174875;gbkey=Gene;locus_tag=YPO2037
NC_003143.1	RefSeq	CDS	2307712	2308449	.	+	0	ID=cds1877;Name=YP_002347019.1;Parent=gene1970;Dbxref=InterPro:IPR003141,InterPro:IPR004013,UniProtKB%2FTrEMBL:Q0WFB9,Genbank:YP_002347019.1,GeneID:1174875;gbkey=CDS;product=hydrolase;protein_id=YP_002347019.1;transl_table=11
NC_003143.1	RefSeq	gene	2308486	2309046	.	+	.	ID=gene1971;Name=YPO2038;Dbxref=GeneID:1174876;gbkey=Gene;locus_tag=YPO2038
NC_003143.1	RefSeq	CDS	2308486	2309046	.	+	0	ID=cds1878;Name=YP_002347020.1;Parent=gene1971;Dbxref=InterPro:IPR010395,UniProtKB%2FTrEMBL:Q7CIA9,Genbank:YP_002347020.1,GeneID:1174876;gbkey=CDS;product=hypothetical protein;protein_id=YP_002347020.1;transl_table=11
NC_003143.1	RefSeq	gene	2309500	2310063	.	-	.	ID=gene1972;Name=YPO2039;Dbxref=GeneID:1174877;gbkey=Gene;locus_tag=YPO2039
NC_003143.1	RefSeq	CDS	2309500	2310063	.	-	0	ID=cds1879;Name=YP_002347021.1;Parent=gene1972;Dbxref=InterPro:IPR010835,UniProtKB%2FTrEMBL:Q0WFB7,Genbank:YP_002347021.1,GeneID:1174877;gbkey=CDS;product=hypothetical protein;protein_id=YP_002347021.1;transl_table=11
NC_003143.1	RefSeq	region	2310004	2310036	.	-	.	ID=id1391;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site.;Dbxref=GeneID:1174877;gbkey=misc_feature
NC_003143.1	RefSeq	ribosome_entry_site	2310069	2310072	.	-	.	ID=id1392;gbkey=RBS
NC_003143.1	RefSeq	gene	2310458	2311663	.	-	.	ID=gene1973;Name=YPO2040;Dbxref=GeneID:1174878;gbkey=Gene;locus_tag=YPO2040
NC_003143.1	RefSeq	CDS	2310458	2311663	.	-	0	ID=cds1880;Name=YP_002347022.1;Parent=gene1973;Note=Confers resistance to norfloxacin and enoxacin;Dbxref=InterPro:IPR007114,InterPro:IPR011701,UniProtKB%2FTrEMBL:Q0WFB6,Genbank:YP_002347022.1,GeneID:1174878;gbkey=CDS;product=multidrug resistance protein MdtH;protein_id=YP_002347022.1;transl_table=11
NC_003143.1	RefSeq	ribosome_entry_site	2311950	2311953	.	+	.	ID=id1393;gbkey=RBS
NC_003143.1	RefSeq	gene	2311957	2312541	.	+	.	ID=gene1974;Name=rimJ;Dbxref=GeneID:1174879;gbkey=Gene;gene=rimJ;locus_tag=YPO2041
NC_003143.1	RefSeq	CDS	2311957	2312541	.	+	0	ID=cds1881;Name=YP_002347023.1;Parent=gene1974;Dbxref=InterPro:IPR000182,UniProtKB%2FTrEMBL:Q7CIB1,Genbank:YP_002347023.1,GeneID:1174879;gbkey=CDS;gene=rimJ;product=ribosomal-protein-S5-alanine N-acetyltransferase;protein_id=YP_002347023.1;transl_table=11
NC_003143.1	RefSeq	ribosome_entry_site	2312540	2312544	.	+	.	ID=id1394;gbkey=RBS;gene=rimJ
NC_003143.1	RefSeq	gene	2312549	2314159	.	+	.	ID=gene1975;Name=YPO2042;Dbxref=GeneID:1174880;gbkey=Gene;locus_tag=YPO2042
NC_003143.1	RefSeq	CDS	2312549	2314159	.	+	0	ID=cds1882;Name=YP_002347024.1;Parent=gene1975;Dbxref=InterPro:IPR000683,InterPro:IPR004104,InterPro:IPR007432,UniProtKB%2FTrEMBL:Q7CIB2,Genbank:YP_002347024.1,GeneID:1174880;gbkey=CDS;product=oxidoreductase;protein_id=YP_002347024.1;transl_table=11
NC_003143.1	RefSeq	gene	2314426	2315961	.	+	.	ID=gene1976;Name=mviN;Dbxref=GeneID:1174881;gbkey=Gene;gene=mviN;locus_tag=YPO2043
NC_003143.1	RefSeq	CDS	2314426	2315961	.	+	0	ID=cds1883;Name=YP_002347025.1;Parent=gene1976;Dbxref=InterPro:IPR004268,UniProtKB%2FTrEMBL:Q7CIB3,Genbank:YP_002347025.1,GeneID:1174881;gbkey=CDS;gene=mviN;product=hypothetical protein;protein_id=YP_002347025.1;transl_table=11
NC_003143.1	RefSeq	gene	2316429	2318102	.	+	.	ID=gene1977;Name=YPO2044;Dbxref=GeneID:1174882;gbkey=Gene;locus_tag=YPO2044
NC_003143.1	RefSeq	CDS	2316429	2318102	.	+	0	ID=cds1884;Name=YP_002347026.1;Parent=gene1977;Dbxref=InterPro:IPR005565,InterPro:IPR013686,UniProtKB%2FTrEMBL:Q0WFB2,Genbank:YP_002347026.1,GeneID:1174882;gbkey=CDS;product=hemolysin activator protein;protein_id=YP_002347026.1;transl_table=11
NC_003143.1	RefSeq	gene	2318132	2322862	.	+	.	ID=gene1978;Name=YPO2045;Dbxref=GeneID:1174883;gbkey=Gene;locus_tag=YPO2045
NC_003143.1	RefSeq	CDS	2318132	2322862	.	+	0	ID=cds1885;Name=YP_002347027.1;Parent=gene1978;Dbxref=InterPro:IPR008619,InterPro:IPR008638,InterPro:IPR011050,UniProtKB%2FTrEMBL:Q7CIB4,Genbank:YP_002347027.1,GeneID:1174883;gbkey=CDS;product=hemolysin;protein_id=YP_002347027.1;transl_table=11
NC_003143.1	RefSeq	gene	2323093	2324823	.	-	.	ID=gene1979;Name=argS;Dbxref=GeneID:1174884;gbkey=Gene;gene=argS;locus_tag=YPO2046
NC_003143.1	RefSeq	CDS	2323093	2324823	.	-	0	ID=cds1886;Name=YP_002347028.1;Parent=gene1979;Note=catalyzes a two-step reaction%2C first charging an arginine molecule by linking its carboxyl group to the alpha-phosphate of ATP%2C followed by transfer of the aminoacyl-adenylate to its tRNA%3B class-I aminoacyl-tRNA synthetase;Dbxref=InterPro:IPR001278,InterPro:IPR001412,InterPro:IPR005148,InterPro:IPR008909,InterPro:IPR009080,UniProtKB%2FTrEMBL:Q0WFB0,Genbank:YP_002347028.1,GeneID:1174884;gbkey=CDS;gene=argS;product=arginyl-tRNA synthetase;protein_id=YP_002347028.1;transl_table=11
NC_003143.1	RefSeq	region	2324425	2324460	.	-	.	ID=id1395;Note=PS00178 Aminoacyl-transfer RNA synthetases class-I signature.;Dbxref=GeneID:1174884;gbkey=misc_feature;gene=argS
NC_003143.1	RefSeq	ribosome_entry_site	2325436	2325439	.	+	.	ID=id1396;gbkey=RBS
NC_003143.1	RefSeq	gene	2325446	2326021	.	+	.	ID=gene1980;Name=YPO2047;Dbxref=GeneID:1174885;gbkey=Gene;locus_tag=YPO2047
NC_003143.1	RefSeq	CDS	2325446	2326021	.	+	0	ID=cds1887;Name=YP_002347029.1;Parent=gene1980;Dbxref=InterPro:IPR010393,UniProtKB%2FTrEMBL:Q7CIB5,Genbank:YP_002347029.1,GeneID:1174885;gbkey=CDS;product=hypothetical protein;protein_id=YP_002347029.1;transl_table=11
NC_003143.1	RefSeq	ribosome_entry_site	2326246	2326249	.	+	.	ID=id1397;gbkey=RBS
NC_003143.1	RefSeq	gene	2326253	2327017	.	+	.	ID=gene1981;Name=cutC;Dbxref=GeneID:1174886;gbkey=Gene;gene=cutC;locus_tag=YPO2048
NC_003143.1	RefSeq	CDS	2326253	2327017	.	+	0	ID=cds1888;Name=YP_002347030.1;Parent=gene1981;Dbxref=InterPro:IPR005627,UniProtKB%2FTrEMBL:Q0WFA8,Genbank:YP_002347030.1,GeneID:1174886;gbkey=CDS;gene=cutC;product=copper homeostasis protein CutC;protein_id=YP_002347030.1;transl_table=11
NC_003143.1	RefSeq	gene	2327210	2328181	.	-	.	ID=gene1982;Name=YPO2049;Dbxref=GeneID:1174887;gbkey=Gene;locus_tag=YPO2049
NC_003143.1	RefSeq	CDS	2327210	2328181	.	-	0	ID=cds1889;Name=YP_002347031.1;Parent=gene1982;Dbxref=InterPro:IPR010017,UniProtKB%2FTrEMBL:Q7CIB6,Genbank:YP_002347031.1,GeneID:1174887;gbkey=CDS;product=hypothetical protein;protein_id=YP_002347031.1;transl_table=11
NC_003143.1	RefSeq	gene	2328178	2328981	.	-	.	ID=gene1983;Name=YPO2050;Dbxref=GeneID:1174888;gbkey=Gene;locus_tag=YPO2050
NC_003143.1	RefSeq	CDS	2328178	2328981	.	-	0	ID=cds1890;Name=YP_002347032.1;Parent=gene1983;Dbxref=InterPro:IPR005271,InterPro:IPR013216,UniProtKB%2FTrEMBL:Q7CIB7,Genbank:YP_002347032.1,GeneID:1174888;gbkey=CDS;product=hypothetical protein;protein_id=YP_002347032.1;transl_table=11
NC_003143.1	RefSeq	ribosome_entry_site	2328186	2328190	.	-	.	ID=id1398;Dbxref=GeneID:1174888;gbkey=RBS
NC_003143.1	RefSeq	gene	2329172	2329567	.	-	.	ID=gene1984;Name=YPO2051;Dbxref=GeneID:1174889;gbkey=Gene;locus_tag=YPO2051
NC_003143.1	RefSeq	CDS	2329172	2329567	.	-	0	ID=cds1891;Name=YP_002347033.1;Parent=gene1984;Dbxref=UniProtKB%2FTrEMBL:Q7CIB8,Genbank:YP_002347033.1,GeneID:1174889;gbkey=CDS;product=hypothetical protein;protein_id=YP_002347033.1;transl_table=11
NC_003143.1	RefSeq	ribosome_entry_site	2329574	2329577	.	-	.	ID=id1399;gbkey=RBS
NC_003143.1	RefSeq	gene	2329747	2330562	.	-	.	ID=gene1985;Name=YPO2052;Dbxref=GeneID:1174890;gbkey=Gene;locus_tag=YPO2052
NC_003143.1	RefSeq	CDS	2329747	2330562	.	-	0	ID=cds1892;Name=YP_002347034.1;Parent=gene1985;Dbxref=InterPro:IPR002763,UniProtKB%2FTrEMBL:Q7CIB9,Genbank:YP_002347034.1,GeneID:1174890;gbkey=CDS;product=hypothetical protein;protein_id=YP_002347034.1;transl_table=11
NC_003143.1	RefSeq	gene	2331620	2333416	.	+	.	ID=gene1986;Name=aspS;Dbxref=GeneID:1174891;gbkey=Gene;gene=aspS;gene_synonym=tls;locus_tag=YPO2053
NC_003143.1	RefSeq	CDS	2331620	2333416	.	+	0	ID=cds1893;Name=YP_002347035.1;Parent=gene1986;Note=catalyzes a two-step reaction%2C first charging an aspartate molecule by linking its carboxyl group to the alpha-phosphate of ATP%2C followed by transfer of the aminoacyl-adenylate to its tRNA%3B contains discriminating and non-discriminating subtypes;Dbxref=InterPro:IPR002312,InterPro:IPR004115,InterPro:IPR004364,InterPro:IPR004365,InterPro:IPR004524,InterPro:IPR006195,InterPro:IPR008994,InterPro:IPR012340,UniProtKB%2FTrEMBL:Q0WFA3,Genbank:YP_002347035.1,GeneID:1174891;gbkey=CDS;gene=aspS;product=aspartyl-tRNA synthetase;protein_id=YP_002347035.1;transl_table=11
NC_003143.1	RefSeq	region	2332265	2332318	.	+	.	ID=id1400;Note=PS00179 Aminoacyl-transfer RNA synthetases class-II signature 1.;Dbxref=GeneID:1174891;gbkey=misc_feature;gene=aspS
NC_003143.1	RefSeq	region	2333213	2333242	.	+	.	ID=id1401;Note=PS00339 Aminoacyl-transfer RNA synthetases class-II signature 2.;Dbxref=GeneID:1174891;gbkey=misc_feature;gene=aspS
NC_003143.1	RefSeq	gene	2333416	2333859	.	+	.	ID=gene1987;Name=ntpA;Dbxref=GeneID:1174892;gbkey=Gene;gene=ntpA;gene_synonym=nudB;locus_tag=YPO2054
NC_003143.1	RefSeq	CDS	2333416	2333859	.	+	0	ID=cds1894;Name=YP_002347036.1;Parent=gene1987;Note=converts dATP to dAMP and pyrophosphate;Dbxref=InterPro:IPR000086,InterPro:IPR002667,InterPro:IPR003564,UniProtKB%2FTrEMBL:Q7CIC0,Genbank:YP_002347036.1,GeneID:1174892;gbkey=CDS;gene=ntpA;product=dATP pyrophosphohydrolase;protein_id=YP_002347036.1;transl_table=11
NC_003143.1	RefSeq	region	2333527	2333586	.	+	.	ID=id1402;Note=PS00893 mutT domain signature.;Dbxref=GeneID:1174892;gbkey=misc_feature;gene=ntpA
NC_003143.1	RefSeq	gene	2333917	2334660	.	+	.	ID=gene1988;Name=YPO2055;Dbxref=GeneID:1174893;gbkey=Gene;locus_tag=YPO2055
NC_003143.1	RefSeq	CDS	2333917	2334660	.	+	0	ID=cds1895;Name=YP_002347037.1;Parent=gene1988;Dbxref=InterPro:IPR002876,UniProtKB%2FTrEMBL:Q0WFA1,Genbank:YP_002347037.1,GeneID:1174893;gbkey=CDS;product=hypothetical protein;protein_id=YP_002347037.1;transl_table=11
NC_003143.1	RefSeq	gene	2334869	2335390	.	+	.	ID=gene1989;Name=ruvC;Dbxref=GeneID:1174894;gbkey=Gene;gene=ruvC;locus_tag=YPO2056
NC_003143.1	RefSeq	CDS	2334869	2335390	.	+	0	ID=cds1896;Name=YP_002347038.1;Parent=gene1989;Note=endonuclease%3B resolves Holliday structures%3B forms a complex of RuvABC%3B the junction binding protein RuvA forms a hexameric ring along with the RuvB helicase and catalyzes branch migration%3B RuvC then interacts with RuvAB to resolve the Holliday junction by nicking DNA strands of like polarity;Dbxref=InterPro:IPR002176,InterPro:IPR012337,UniProtKB%2FTrEMBL:Q0WFA0,Genbank:YP_002347038.1,GeneID:1174894;gbkey=CDS;gene=ruvC;product=Holliday junction resolvase;protein_id=YP_002347038.1;transl_table=11
NC_003143.1	RefSeq	region	2335205	2335309	.	+	.	ID=id1403;Note=PS01321 Crossover junction endodeoxyribonuclease ruvC signature.;Dbxref=GeneID:1174894;gbkey=misc_feature;gene=ruvC
NC_003143.1	RefSeq	ribosome_entry_site	2335659	2335663	.	+	.	ID=id1404;gbkey=RBS
NC_003143.1	RefSeq	gene	2335673	2336287	.	+	.	ID=gene1990;Name=ruvA;Dbxref=GeneID:1174895;gbkey=Gene;gene=ruvA;locus_tag=YPO2057
NC_003143.1	RefSeq	CDS	2335673	2336287	.	+	0	ID=cds1897;Name=YP_002347039.1;Parent=gene1990;Note=plays an essential role in ATP-dependent branch migration of the Holliday junction;Dbxref=InterPro:IPR000085,InterPro:IPR000445,InterPro:IPR003583,InterPro:IPR008994,InterPro:IPR010994,InterPro:IPR011114,InterPro:IPR011132,InterPro:IPR012340,InterPro:IPR013849,InterPro:IPR013850,UniProtKB%2FTrEMBL:Q0WF99,Genbank:YP_002347039.1,GeneID:1174895;gbkey=CDS;gene=ruvA;product=Holliday junction DNA helicase RuvA;protein_id=YP_002347039.1;transl_table=11
NC_003143.1	RefSeq	gene	2336449	2337453	.	+	.	ID=gene1991;Name=ruvB;Dbxref=GeneID:1174896;gbkey=Gene;gene=ruvB;locus_tag=YPO2058
NC_003143.1	RefSeq	CDS	2336449	2337453	.	+	0	ID=cds1898;Name=YP_002347040.1;Parent=gene1991;Note=promotes strand exchange during homologous recombination%3B RuvAB complex promotes branch migration%3B RuvABC complex scans the DNA during branch migration and resolves Holliday junctions at consensus sequences%3B forms hexameric rings around opposite DNA arms%3B requires ATP for branch migration and orientation of RuvAB complex determines direction of migration;Dbxref=InterPro:IPR003593,InterPro:IPR003959,InterPro:IPR004605,InterPro:IPR008823,InterPro:IPR008824,InterPro:IPR011991,UniProtKB%2FTrEMBL:Q0WF98,Genbank:YP_002347040.1,GeneID:1174896;gbkey=CDS;gene=ruvB;product=Holliday junction DNA helicase RuvB;protein_id=YP_002347040.1;transl_table=11
NC_003143.1	RefSeq	region	2336632	2336655	.	+	.	ID=id1405;Note=PS00017 ATP%2FGTP-binding site motif A %28P-loop%29.;Dbxref=GeneID:1174896;gbkey=misc_feature;gene=ruvB
NC_003143.1	RefSeq	gene	2337508	2338293	.	-	.	ID=gene1992;Name=znuB;Dbxref=GeneID:1174897;gbkey=Gene;gene=znuB;locus_tag=YPO2059
NC_003143.1	RefSeq	CDS	2337508	2338293	.	-	0	ID=cds1899;Name=YP_002347041.1;Parent=gene1992;Note=involved in transport of zinc%28II%29 with ZnuA and C;Dbxref=InterPro:IPR001626,UniProtKB%2FTrEMBL:Q7CIC1,Genbank:YP_002347041.1,GeneID:1174897;gbkey=CDS;gene=znuB;product=high-affinity zinc transporter membrane protein;protein_id=YP_002347041.1;transl_table=11
NC_003143.1	RefSeq	gene	2338290	2339048	.	-	.	ID=gene1993;Name=znuC;Dbxref=GeneID:1174898;gbkey=Gene;gene=znuC;locus_tag=YPO2060
NC_003143.1	RefSeq	CDS	2338290	2339048	.	-	0	ID=cds1900;Name=YP_002347042.1;Parent=gene1993;Note=involved in transport of zinc%28II%29 with ZnuA and C;Dbxref=InterPro:IPR003439,InterPro:IPR003593,UniProtKB%2FTrEMBL:Q7CIC2,Genbank:YP_002347042.1,GeneID:1174898;gbkey=CDS;gene=znuC;product=high-affinity zinc transporter ATPase;protein_id=YP_002347042.1;transl_table=11
NC_003143.1	RefSeq	ribosome_entry_site	2338303	2338306	.	-	.	ID=id1406;Dbxref=GeneID:1174898;gbkey=RBS;gene=znuC
NC_003143.1	RefSeq	region	2338917	2338940	.	-	.	ID=id1407;Note=PS00017 ATP%2FGTP-binding site motif A %28P-loop%29.;Dbxref=GeneID:1174898;gbkey=misc_feature;gene=znuC
NC_003143.1	RefSeq	gene	2339124	2340080	.	+	.	ID=gene1994;Name=znuA;Dbxref=GeneID:1174899;gbkey=Gene;gene=znuA;locus_tag=YPO2061
NC_003143.1	RefSeq	CDS	2339124	2340080	.	+	0	ID=cds1901;Name=YP_002347043.1;Parent=gene1994;Note=involved in transport of zinc%28II%29 with ZnuA and C;Dbxref=InterPro:IPR006127,UniProtKB%2FTrEMBL:Q0WF95,Genbank:YP_002347043.1,GeneID:1174899;gbkey=CDS;gene=znuA;product=high-affinity zinc transporter substrate-binding protein;protein_id=YP_002347043.1;transl_table=11
NC_003143.1	RefSeq	gene	2340101	2341417	.	+	.	ID=gene1995;Name=YPO2062;Dbxref=GeneID:1174900;gbkey=Gene;locus_tag=YPO2062
NC_003143.1	RefSeq	CDS	2340101	2341417	.	+	0	ID=cds1902;Name=YP_002347044.1;Parent=gene1995;Dbxref=InterPro:IPR002482,InterPro:IPR002886,InterPro:IPR011055,UniProtKB%2FTrEMBL:Q0WF94,Genbank:YP_002347044.1,GeneID:1174900;gbkey=CDS;product=hypothetical protein;protein_id=YP_002347044.1;transl_table=11
NC_003143.1	RefSeq	gene	2341684	2342646	.	+	.	ID=gene1996;Name=msbB;Dbxref=GeneID:1174901;gbkey=Gene;gene=msbB;locus_tag=YPO2063
NC_003143.1	RefSeq	CDS	2341684	2342646	.	+	0	ID=cds1903;Name=YP_002347045.1;Parent=gene1996;Note=Transfers myristate or laurate%2C activated on ACP%2C to the lipid IVA moiety of %28KDO%292-%28lauroyl%29-lipid IVA;Dbxref=InterPro:IPR004960,InterPro:IPR011921,UniProtKB%2FTrEMBL:Q7CIC3,Genbank:YP_002347045.1,GeneID:1174901;gbkey=CDS;gene=msbB;product=lipid A biosynthesis %28KDO%292-%28lauroyl%29-lipid IVA acyltransferase;protein_id=YP_002347045.1;transl_table=11
NC_003143.1	RefSeq	region	2341753	2341806	.	+	.	ID=id1408;Note=1 probable transmembrane helix predicted;Dbxref=GeneID:1174901;gbkey=misc_feature;gene=msbB
NC_003143.1	RefSeq	gene	2342991	2344433	.	-	.	ID=gene1997;Name=pykA;Dbxref=GeneID:1174902;gbkey=Gene;gene=pykA;locus_tag=YPO2064
NC_003143.1	RefSeq	CDS	2342991	2344433	.	-	0	ID=cds1904;Name=YP_002347046.1;Parent=gene1997;Note=catalyzes the formation of phosphoenolpyruvate from pyruvate;Dbxref=InterPro:IPR001697,UniProtKB%2FTrEMBL:Q7CIC4,Genbank:YP_002347046.1,GeneID:1174902;gbkey=CDS;gene=pykA;product=pyruvate kinase;protein_id=YP_002347046.1;transl_table=11
NC_003143.1	RefSeq	region	2343744	2343782	.	-	.	ID=id1409;Note=PS00110 Pyruvate kinase active site signature.;Dbxref=GeneID:1174902;gbkey=misc_feature;gene=pykA
NC_003143.1	RefSeq	ribosome_entry_site	2344440	2344443	.	-	.	ID=id1410;gbkey=RBS
NC_003143.1	RefSeq	gene	2344763	2345632	.	-	.	ID=gene1998;Name=hexR;Dbxref=GeneID:1174903;gbkey=Gene;gene=hexR;locus_tag=YPO2065
NC_003143.1	RefSeq	CDS	2344763	2345632	.	-	0	ID=cds1905;Name=YP_002347047.1;Parent=gene1998;Note=Represses the expression of the zwf%2C eda%2C glp and gap;Dbxref=InterPro:IPR000281,InterPro:IPR001347,InterPro:IPR011991,UniProtKB%2FTrEMBL:Q0WF91,Genbank:YP_002347047.1,GeneID:1174903;gbkey=CDS;gene=hexR;product=DNA-binding transcriptional regulator HexR;protein_id=YP_002347047.1;transl_table=11
NC_003143.1	RefSeq	region	2345465	2345530	.	-	.	ID=id1411;Note=Predicted helix-turn-helix motif with score 1685 %28%2B4.93 SD%29 at aa 87-108%2C sequence SSIATLAKMANVSEPTVNRFCR;Dbxref=GeneID:1174903;gbkey=misc_feature;gene=hexR
NC_003143.1	RefSeq	ribosome_entry_site	2345974	2345978	.	+	.	ID=id1412;gbkey=RBS
NC_003143.1	RefSeq	gene	2345994	2347469	.	+	.	ID=gene1999;Name=zwf;Dbxref=GeneID:1174904;gbkey=Gene;gene=zwf;locus_tag=YPO2066
NC_003143.1	RefSeq	CDS	2345994	2347469	.	+	0	ID=cds1906;Name=YP_002347048.1;Parent=gene1999;Note=catalyzes the formation of D-glucono-1%2C5-lactone 6-phosphate from D-glucose 6-phosphate;Dbxref=InterPro:IPR001282,UniProtKB%2FTrEMBL:Q0WF90,Genbank:YP_002347048.1,GeneID:1174904;gbkey=CDS;gene=zwf;product=glucose-6-phosphate 1-dehydrogenase;protein_id=YP_002347048.1;transl_table=11
NC_003143.1	RefSeq	region	2346519	2346539	.	+	.	ID=id1413;Note=PS00069 Glucose-6-phosphate dehydrogenase active site.;Dbxref=GeneID:1174904;gbkey=misc_feature;gene=zwf
NC_003143.1	RefSeq	ribosome_entry_site	2347697	2347700	.	+	.	ID=id1414;gbkey=RBS
NC_003143.1	RefSeq	gene	2347711	2348352	.	+	.	ID=gene2000;Name=eda;Dbxref=GeneID:1174905;gbkey=Gene;gene=eda;gene_synonym=hga,kdgA;locus_tag=YPO2067
NC_003143.1	RefSeq	CDS	2347711	2348352	.	+	0	ID=cds1907;Name=YP_002347049.1;Parent=gene2000;Note=catalyzes the formation of pyruvate and glyoxylate from 4-hydroxy-2-oxoglutarate%3B or pyruvate and D-glyceraldehyde 3-phosphate from 2-dehydro-3-deoxy-D-glyconate 6-phosphate;Dbxref=InterPro:IPR000887,UniProtKB%2FTrEMBL:Q7CIC5,Genbank:YP_002347049.1,GeneID:1174905;gbkey=CDS;gene=eda;product=keto-hydroxyglutarate-aldolase%2Fketo-deoxy-phosphogluconate aldolase;protein_id=YP_002347049.1;transl_table=11
NC_003143.1	RefSeq	region	2347828	2347857	.	+	.	ID=id1415;Note=PS00159 KDPG and KHG aldolases active site.;Dbxref=GeneID:1174905;gbkey=misc_feature;gene=eda
NC_003143.1	RefSeq	region	2348092	2348133	.	+	.	ID=id1416;Note=PS00160 KDPG and KHG aldolases Schiff-base forming residue.;Dbxref=GeneID:1174905;gbkey=misc_feature;gene=eda
NC_003143.1	RefSeq	gene	2349046	2349510	.	+	.	ID=gene2001;Name=YPO2068;Dbxref=GeneID:1174906;gbkey=Gene;locus_tag=YPO2068
NC_003143.1	RefSeq	CDS	2349046	2349510	.	+	0	ID=cds1908;Name=YP_002347050.1;Parent=gene2001;Dbxref=InterPro:IPR000390,UniProtKB%2FTrEMBL:Q7CIC6,Genbank:YP_002347050.1,GeneID:1174906;gbkey=CDS;product=hypothetical protein;protein_id=YP_002347050.1;transl_table=11
NC_003143.1	RefSeq	gene	2349530	2349826	.	+	.	ID=gene2002;Name=YPO2069;Dbxref=GeneID:1174907;gbkey=Gene;locus_tag=YPO2069
NC_003143.1	RefSeq	CDS	2349530	2349826	.	+	0	ID=cds1909;Name=YP_002347051.1;Parent=gene2002;Note=with MdtJ is involved in resistance to deoxycholate%2C nalidixic acid%2C fosfomycin%2C and SDS;Dbxref=InterPro:IPR000390,UniProtKB%2FTrEMBL:Q0WF87,Genbank:YP_002347051.1,GeneID:1174907;gbkey=CDS;product=multidrug efflux system protein MdtI;protein_id=YP_002347051.1;transl_table=11
NC_003143.1	RefSeq	gene	2349958	2350302	.	-	.	ID=gene2003;Name=YPO2070;Dbxref=GeneID:1174908;gbkey=Gene;locus_tag=YPO2070
NC_003143.1	RefSeq	CDS	2349958	2350302	.	-	0	ID=cds1910;Name=YP_002347052.1;Parent=gene2003;Dbxref=InterPro:IPR006056,InterPro:IPR006175,InterPro:IPR013813,UniProtKB%2FTrEMBL:Q7CIC7,Genbank:YP_002347052.1,GeneID:1174908;gbkey=CDS;product=hypothetical protein;protein_id=YP_002347052.1;transl_table=11
NC_003143.1	RefSeq	region	2349979	2350035	.	-	.	ID=id1417;Note=PS01094 Uncharacterized protein family UPF0076 signature.;Dbxref=GeneID:1174908;gbkey=misc_feature
NC_003143.1	RefSeq	ribosome_entry_site	2350307	2350311	.	-	.	ID=id1418;gbkey=RBS
NC_003143.1	RefSeq	gene	2350433	2352337	.	+	.	ID=gene2004;Name=YPO2071;Dbxref=GeneID:1174909;gbkey=Gene;locus_tag=YPO2071
NC_003143.1	RefSeq	CDS	2350433	2352337	.	+	0	ID=cds1911;Name=YP_002347053.1;Parent=gene2004;Dbxref=InterPro:IPR006555,InterPro:IPR014001,InterPro:IPR014013,UniProtKB%2FTrEMBL:Q7CIC8,Genbank:YP_002347053.1,GeneID:1174909;gbkey=CDS;product=DEAD box family helicase;protein_id=YP_002347053.1;transl_table=11
NC_003143.1	RefSeq	region	2350565	2350588	.	+	.	ID=id1419;Note=PS00017 ATP%2FGTP-binding site motif A %28P-loop%29.;Dbxref=GeneID:1174909;gbkey=misc_feature
NC_003143.1	RefSeq	ribosome_entry_site	2352400	2352404	.	+	.	ID=id1420;gbkey=RBS
NC_003143.1	RefSeq	gene	2352409	2353107	.	+	.	ID=gene2005;Name=YPO2072;Dbxref=GeneID:1174910;gbkey=Gene;locus_tag=YPO2072
NC_003143.1	RefSeq	CDS	2352409	2353107	.	+	0	ID=cds1912;Name=YP_002347054.1;Parent=gene2005;Dbxref=InterPro:IPR000905,UniProtKB%2FTrEMBL:Q0WF84,Genbank:YP_002347054.1,GeneID:1174910;gbkey=CDS;product=hypothetical protein;protein_id=YP_002347054.1;transl_table=11
NC_003143.1	RefSeq	gene	2353262	2353849	.	+	.	ID=gene2006;Name=YPO2073;Dbxref=GeneID:1174911;gbkey=Gene;locus_tag=YPO2073
NC_003143.1	RefSeq	CDS	2353262	2353849	.	+	0	ID=cds1913;Name=YP_002347055.1;Parent=gene2006;Dbxref=InterPro:IPR004658,UniProtKB%2FTrEMBL:Q0WF83,Genbank:YP_002347055.1,GeneID:1174911;gbkey=CDS;product=lipoprotein;protein_id=YP_002347055.1;transl_table=11
NC_003143.1	RefSeq	region	2353310	2353342	.	+	.	ID=id1421;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site.;Dbxref=GeneID:1174911;gbkey=misc_feature
NC_003143.1	RefSeq	ribosome_entry_site	2354480	2354484	.	+	.	ID=id1422;gbkey=RBS
NC_003143.1	RefSeq	gene	2354492	2356180	.	+	.	ID=gene2007;Name=fadD;Dbxref=GeneID:1174912;gbkey=Gene;gene=fadD;locus_tag=YPO2074
NC_003143.1	RefSeq	CDS	2354492	2356180	.	+	0	ID=cds1914;Name=YP_002347056.1;Parent=gene2007;Note=Activates fatty acids by binding to coenzyme A;Dbxref=InterPro:IPR000873,UniProtKB%2FTrEMBL:Q0WF82,Genbank:YP_002347056.1,GeneID:1174912;gbkey=CDS;gene=fadD;product=long-chain-fatty-acid--CoA ligase;protein_id=YP_002347056.1;transl_table=11
NC_003143.1	RefSeq	region	2355122	2355157	.	+	.	ID=id1423;Note=PS00455  AMP-binding domain signature.;Dbxref=GeneID:1174912;gbkey=misc_feature;gene=fadD
NC_003143.1	RefSeq	gene	2356340	2357461	.	+	.	ID=gene2008;Name=rnd;Dbxref=GeneID:1174913;gbkey=Gene;gene=rnd;locus_tag=YPO2075
NC_003143.1	RefSeq	CDS	2356340	2357461	.	+	0	ID=cds1915;Name=YP_002347057.1;Parent=gene2008;Dbxref=InterPro:IPR002121,InterPro:IPR002562,InterPro:IPR006292,InterPro:IPR012337,UniProtKB%2FTrEMBL:Q0WF81,Genbank:YP_002347057.1,GeneID:1174913;gbkey=CDS;gene=rnd;product=ribonuclease D;protein_id=YP_002347057.1;transl_table=11
NC_003143.1	RefSeq	gene	2357698	2357967	.	-	.	ID=gene2009;Name=minE;Dbxref=GeneID:1174914;gbkey=Gene;gene=minE;locus_tag=YPO2076
NC_003143.1	RefSeq	CDS	2357698	2357967	.	-	0	ID=cds1916;Name=YP_002347058.1;Parent=gene2009;Note=works in conjunction with MinC and MinD to enable cell division at the midpoint of the long axis of the cell;Dbxref=InterPro:IPR005527,UniProtKB%2FTrEMBL:Q0WF80,Genbank:YP_002347058.1,GeneID:1174914;gbkey=CDS;gene=minE;product=cell division topological specificity factor MinE;protein_id=YP_002347058.1;transl_table=11
NC_003143.1	RefSeq	gene	2357971	2358783	.	-	.	ID=gene2010;Name=minD;Dbxref=GeneID:1174915;gbkey=Gene;gene=minD;locus_tag=YPO2077
NC_003143.1	RefSeq	CDS	2357971	2358783	.	-	0	ID=cds1917;Name=YP_002347059.1;Parent=gene2010;Note=ATPase%3B with MinC inhibits cell division by blocking formation of the polar Z ring septums;Dbxref=InterPro:IPR002586,InterPro:IPR010223,UniProtKB%2FTrEMBL:Q7CIC9,Genbank:YP_002347059.1,GeneID:1174915;gbkey=CDS;gene=minD;product=cell division inhibitor MinD;protein_id=YP_002347059.1;transl_table=11
NC_003143.1	RefSeq	region	2358733	2358756	.	-	.	ID=id1424;Note=PS00017 ATP%2FGTP-binding site motif A %28P-loop%29.;Dbxref=GeneID:1174915;gbkey=misc_feature;gene=minD
NC_003143.1	RefSeq	ribosome_entry_site	2358793	2358797	.	-	.	ID=id1425;gbkey=RBS
NC_003143.1	RefSeq	gene	2358808	2359494	.	-	.	ID=gene2011;Name=minC;Dbxref=GeneID:1174916;gbkey=Gene;gene=minC;locus_tag=YPO2078
NC_003143.1	RefSeq	CDS	2358808	2359494	.	-	0	ID=cds1918;Name=YP_002347060.1;Parent=gene2011;Note=blocks the formation of polar Z-ring septums;Dbxref=InterPro:IPR005526,InterPro:IPR007874,InterPro:IPR013033,UniProtKB%2FTrEMBL:Q0WF78,Genbank:YP_002347060.1,GeneID:1174916;gbkey=CDS;gene=minC;product=septum formation inhibitor;protein_id=YP_002347060.1;transl_table=11
NC_003143.1	RefSeq	gene	2360215	2360487	.	+	.	ID=gene2012;Name=YPO2080;Dbxref=GeneID:1174918;gbkey=Gene;locus_tag=YPO2080
NC_003143.1	RefSeq	CDS	2360215	2360487	.	+	0	ID=cds1919;Name=YP_002347062.1;Parent=gene2012;Dbxref=InterPro:IPR007840,UniProtKB%2FTrEMBL:Q7CID0,Genbank:YP_002347062.1,GeneID:1174918;gbkey=CDS;product=hypothetical protein;protein_id=YP_002347062.1;transl_table=11
NC_003143.1	RefSeq	gene	2360628	2361713	.	+	.	ID=gene2013;Name=YPO2081;Dbxref=GeneID:1174919;gbkey=Gene;locus_tag=YPO2081
NC_003143.1	RefSeq	CDS	2360628	2361713	.	+	0	ID=cds1920;Name=YP_002347063.1;Parent=gene2013;Dbxref=InterPro:IPR011970,UniProtKB%2FTrEMBL:Q74U30,Genbank:YP_002347063.1,GeneID:1174919;gbkey=CDS;product=lipoprotein;protein_id=YP_002347063.1;transl_table=11
NC_003143.1	RefSeq	region	2360649	2360681	.	+	.	ID=id1426;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site.;Dbxref=GeneID:1174919;gbkey=misc_feature
NC_003143.1	RefSeq	ribosome_entry_site	2361776	2361779	.	+	.	ID=id1427;gbkey=RBS
NC_003143.1	RefSeq	gene	2361784	2362440	.	+	.	ID=gene2014;Name=YPO2082;Dbxref=GeneID:1174920;gbkey=Gene;locus_tag=YPO2082
NC_003143.1	RefSeq	CDS	2361784	2362440	.	+	0	ID=cds1921;Name=YP_002347064.1;Parent=gene2014;Dbxref=InterPro:IPR002529,UniProtKB%2FTrEMBL:Q0WF74,Genbank:YP_002347064.1,GeneID:1174920;gbkey=CDS;product=hypothetical protein;protein_id=YP_002347064.1;transl_table=11
NC_003143.1	RefSeq	gene	2362543	2362989	.	+	.	ID=gene2015;Name=YPO2083;Dbxref=GeneID:1174921;gbkey=Gene;locus_tag=YPO2083
NC_003143.1	RefSeq	CDS	2362543	2362989	.	+	0	ID=cds1922;Name=YP_002347065.1;Parent=gene2015;Dbxref=InterPro:IPR005358,InterPro:IPR008228,UniProtKB%2FTrEMBL:Q0WF73,Genbank:YP_002347065.1,GeneID:1174921;gbkey=CDS;product=hypothetical protein;protein_id=YP_002347065.1;transl_table=11
NC_003143.1	RefSeq	gene	2363016	2364254	.	-	.	ID=gene2016;Name=YOP2083;Dbxref=GeneID:16744762;gbkey=Gene;locus_tag=YOP2083
NC_003143.1	RefSeq	CDS	2363016	2364254	.	-	0	ID=cds1923;Name=YP_008479712.1;Parent=gene2016;Dbxref=Genbank:YP_008479712.1,GeneID:16744762;gbkey=CDS;product=integrase;protein_id=YP_008479712.1;transl_table=11
NC_003143.1	RefSeq	region	2366193	2366264	.	-	.	ID=id1428;Note=Similar to Escherichia coli O157:H7 integrase Int TR:Q9EY96 %28EMBL:AP000400%29 %28428 aa%29 fasta scores: E%28%29: 3.9e-94%2C 54.118%25 id in 425 aa%2C and to Escherichia coli  lambdoid prophage RAC integrase IntR SW:INTR_ECOLI %28P76056%29 %28411 aa%29 fasta scores: E%28%29: 2e-66%2C 41.346%25 id in 416 aa. CDS is disrupted by the insertion of an IS100 element after codon 24;gbkey=misc_feature;part=1%2F2;pseudo=true
NC_003143.1	RefSeq	region	2363019	2364233	.	-	.	ID=id1428;Note=Similar to Escherichia coli O157:H7 integrase Int TR:Q9EY96 %28EMBL:AP000400%29 %28428 aa%29 fasta scores: E%28%29: 3.9e-94%2C 54.118%25 id in 425 aa%2C and to Escherichia coli  lambdoid prophage RAC integrase IntR SW:INTR_ECOLI %28P76056%29 %28411 aa%29 fasta scores: E%28%29: 2e-66%2C 41.346%25 id in 416 aa. CDS is disrupted by the insertion of an IS100 element after codon 24;gbkey=misc_feature;part=2%2F2;pseudo=true
NC_003143.1	RefSeq	ribosome_entry_site	2364180	2364186	.	-	.	ID=id1429;Dbxref=GeneID:16744762;gbkey=RBS
NC_003143.1	RefSeq	repeat_region	2364238	2366191	.	+	.	ID=id1430;Note=insertion sequence:IS100;gbkey=repeat_region
NC_003143.1	RefSeq	repeat_region	2364238	2364265	.	+	.	ID=id1431;Note=IS100 inverted repeat;gbkey=repeat_region
NC_003143.1	RefSeq	gene	2364324	2365346	.	+	.	ID=gene2017;Name=y1093;Dbxref=GeneID:1174923;gbkey=Gene;gene=y1093;gene_synonym=ypmt1;locus_tag=YPO2085
NC_003143.1	RefSeq	CDS	2364324	2365346	.	+	0	ID=cds1924;Name=YP_002347066.1;Parent=gene2017;Dbxref=InterPro:IPR001584,InterPro:IPR006120,InterPro:IPR009057,InterPro:IPR012287,InterPro:IPR012337,UniProtKB%2FTrEMBL:Q7ARN5,Genbank:YP_002347066.1,GeneID:1174923;gbkey=CDS;gene=y1093;product=transposase for insertion sequence IS100;protein_id=YP_002347066.1;transl_table=11
NC_003143.1	RefSeq	region	2364375	2364440	.	+	.	ID=id1432;Note=Predicted helix-turn-helix motif with score 2147 %28%2B6.50 SD%29 at aa 18-39%2C sequence MSSRAIARELGISRNTVKRYLQ;Dbxref=GeneID:1174923;gbkey=misc_feature;gene=y1093
NC_003143.1	RefSeq	gene	2365343	2366125	.	+	.	ID=gene2018;Name=YPO2086;Note=ypmt1.57c;Dbxref=GeneID:1174924;gbkey=Gene;locus_tag=YPO2086
NC_003143.1	RefSeq	CDS	2365343	2366125	.	+	0	ID=cds1925;Name=YP_002347067.1;Parent=gene2018;Dbxref=InterPro:IPR001270,InterPro:IPR002611,InterPro:IPR003593,UniProtKB%2FTrEMBL:Q7ARK4,Genbank:YP_002347067.1,GeneID:1174924;gbkey=CDS;product=transposase%2FIS protein;protein_id=YP_002347067.1;transl_table=11
NC_003143.1	RefSeq	region	2365670	2365693	.	+	.	ID=id1433;Note=PS00017 ATP%2FGTP-binding site motif A %28P-loop%29.;Dbxref=GeneID:1174924;gbkey=misc_feature
NC_003143.1	RefSeq	repeat_region	2366164	2366191	.	-	.	ID=id1434;Note=IS100 inverted repeat;gbkey=repeat_region
NC_003143.1	RefSeq	gene	2366293	2366553	.	-	.	ID=gene2019;Name=YPO2087;Dbxref=GeneID:1174925;gbkey=Gene;locus_tag=YPO2087
NC_003143.1	RefSeq	CDS	2366293	2366553	.	-	0	ID=cds1926;Name=YP_002347068.1;Parent=gene2019;Dbxref=InterPro:IPR009634,UniProtKB%2FTrEMBL:Q74U26,Genbank:YP_002347068.1,GeneID:1174925;gbkey=CDS;product=phage excisionase;protein_id=YP_002347068.1;transl_table=11
NC_003143.1	RefSeq	ribosome_entry_site	2366558	2366562	.	-	.	ID=id1435;gbkey=RBS
NC_003143.1	RefSeq	gene	2366853	2367497	.	-	.	ID=gene2020;Name=YPO2088;Dbxref=GeneID:1174927;gbkey=Gene;locus_tag=YPO2088
NC_003143.1	RefSeq	CDS	2366853	2367497	.	-	0	ID=cds1927;Name=YP_002347070.1;Parent=gene2020;Dbxref=UniProtKB%2FTrEMBL:Q7CID3,Genbank:YP_002347070.1,GeneID:1174927;gbkey=CDS;product=methyltransferase;protein_id=YP_002347070.1;transl_table=11
NC_003143.1	RefSeq	gene	2367596	2368024	.	+	.	ID=gene2021;Name=ninB;Dbxref=GeneID:1174928;gbkey=Gene;gene=ninB;locus_tag=YPO2089
NC_003143.1	RefSeq	CDS	2367596	2368024	.	+	0	ID=cds1928;Name=YP_002347071.1;Parent=gene2021;Dbxref=InterPro:IPR008711,UniProtKB%2FTrEMBL:Q0WF67,Genbank:YP_002347071.1,GeneID:1174928;gbkey=CDS;gene=ninB;product=hypothetical protein;protein_id=YP_002347071.1;transl_table=11
NC_003143.1	RefSeq	ribosome_entry_site	2368085	2368088	.	+	.	ID=id1436;gbkey=RBS
NC_003143.1	RefSeq	gene	2368098	2368703	.	+	.	ID=gene2022;Name=YPO2090;Dbxref=GeneID:1174929;gbkey=Gene;locus_tag=YPO2090
NC_003143.1	RefSeq	CDS	2368098	2368703	.	+	0	ID=cds1929;Name=YP_002347072.1;Parent=gene2022;Dbxref=InterPro:IPR008713,UniProtKB%2FTrEMBL:Q7CID4,Genbank:YP_002347072.1,GeneID:1174929;gbkey=CDS;product=hypothetical protein;protein_id=YP_002347072.1;transl_table=11
NC_003143.1	RefSeq	ribosome_entry_site	2368692	2368695	.	+	.	ID=id1437;Dbxref=GeneID:1174929;gbkey=RBS
NC_003143.1	RefSeq	gene	2368704	2369093	.	+	.	ID=gene2023;Name=YPO2091;Dbxref=GeneID:1174930;gbkey=Gene;locus_tag=YPO2091
NC_003143.1	RefSeq	CDS	2368704	2369093	.	+	0	ID=cds1930;Name=YP_002347073.1;Parent=gene2023;Dbxref=InterPro:IPR010534,InterPro:IPR013838,UniProtKB%2FTrEMBL:Q7CID5,Genbank:YP_002347073.1,GeneID:1174930;gbkey=CDS;product=phage antitermination protein;protein_id=YP_002347073.1;transl_table=11
NC_003143.1	RefSeq	ribosome_entry_site	2369349	2369353	.	+	.	ID=id1438;gbkey=RBS
NC_003143.1	RefSeq	gene	2369364	2369927	.	+	.	ID=gene2024;Name=YPO2093;Dbxref=GeneID:1174932;gbkey=Gene;locus_tag=YPO2093
NC_003143.1	RefSeq	CDS	2369364	2369927	.	+	0	ID=cds1931;Name=YP_002347075.1;Parent=gene2024;Dbxref=UniProtKB%2FTrEMBL:Q7CID6,Genbank:YP_002347075.1,GeneID:1174932;gbkey=CDS;product=hypothetical protein;protein_id=YP_002347075.1;transl_table=11
NC_003143.1	RefSeq	ribosome_entry_site	2370342	2370346	.	+	.	ID=id1439;gbkey=RBS
NC_003143.1	RefSeq	gene	2370351	2370560	.	+	.	ID=gene2025;Name=YPO2095;Dbxref=GeneID:1174934;gbkey=Gene;locus_tag=YPO2095
NC_003143.1	RefSeq	CDS	2370351	2370560	.	+	0	ID=cds1932;Name=YP_002347077.1;Parent=gene2025;Dbxref=UniProtKB%2FTrEMBL:Q7CID7,Genbank:YP_002347077.1,GeneID:1174934;gbkey=CDS;product=hypothetical protein;protein_id=YP_002347077.1;transl_table=11
NC_003143.1	RefSeq	gene	2370557	2370832	.	-	.	ID=gene2026;Name=YPO2096;Dbxref=GeneID:1174935;gbkey=Gene;locus_tag=YPO2096
NC_003143.1	RefSeq	CDS	2370557	2370832	.	-	0	ID=cds1933;Name=YP_002347078.1;Parent=gene2026;Dbxref=UniProtKB%2FTrEMBL:Q0WF60,Genbank:YP_002347078.1,GeneID:1174935;gbkey=CDS;product=hypothetical protein;protein_id=YP_002347078.1;transl_table=11
NC_003143.1	RefSeq	region	2371162	2371221	.	+	.	ID=id1440;Note=1 probable transmembrane helix predicted;gbkey=misc_feature
NC_003143.1	RefSeq	gene	2371306	2371818	.	+	.	ID=gene2027;Name=YPO2098;Dbxref=GeneID:1174937;gbkey=Gene;locus_tag=YPO2098
NC_003143.1	RefSeq	CDS	2371306	2371818	.	+	0	ID=cds1934;Name=YP_002347080.1;Parent=gene2027;Dbxref=InterPro:IPR002196,UniProtKB%2FTrEMBL:Q0WF58,Genbank:YP_002347080.1,GeneID:1174937;gbkey=CDS;product=phage lysozyme;protein_id=YP_002347080.1;transl_table=11
NC_003143.1	RefSeq	region	2371324	2371392	.	+	.	ID=id1441;Note=1 probable transmembrane helix predicted;Dbxref=GeneID:1174937;gbkey=misc_feature
NC_003143.1	RefSeq	ribosome_entry_site	2371789	2371794	.	+	.	ID=id1442;Dbxref=GeneID:1174937;gbkey=RBS
NC_003143.1	RefSeq	gene	2371803	2372261	.	+	.	ID=gene2028;Name=rzpR;Dbxref=GeneID:1174938;gbkey=Gene;gene=rzpR;locus_tag=YPO2099
NC_003143.1	RefSeq	CDS	2371803	2372261	.	+	0	ID=cds1935;Name=YP_002347081.1;Parent=gene2028;Dbxref=InterPro:IPR004929,InterPro:IPR012338,UniProtKB%2FTrEMBL:Q7CID8,Genbank:YP_002347081.1,GeneID:1174938;gbkey=CDS;gene=rzpR;product=prophage endopeptidase;protein_id=YP_002347081.1;transl_table=11
NC_003143.1	RefSeq	gene	2372723	2373520	.	+	.	ID=gene2029;Name=YPO2100;Dbxref=GeneID:1174939;gbkey=Gene;locus_tag=YPO2100
NC_003143.1	RefSeq	CDS	2372723	2373520	.	+	0	ID=cds1936;Name=YP_002347082.1;Parent=gene2029;Dbxref=UniProtKB%2FTrEMBL:Q7CID9,Genbank:YP_002347082.1,GeneID:1174939;gbkey=CDS;product=phage regulatory protein;protein_id=YP_002347082.1;transl_table=11
NC_003143.1	RefSeq	gene	2373977	2374612	.	+	.	ID=gene2030;Name=YPO2101;Dbxref=GeneID:1174940;gbkey=Gene;locus_tag=YPO2101
NC_003143.1	RefSeq	CDS	2373977	2374612	.	+	0	ID=cds1937;Name=YP_002347083.1;Parent=gene2030;Dbxref=InterPro:IPR006025,UniProtKB%2FTrEMBL:Q7CIE0,Genbank:YP_002347083.1,GeneID:1174940;gbkey=CDS;product=hypothetical protein;protein_id=YP_002347083.1;transl_table=11
NC_003143.1	RefSeq	region	2374364	2374393	.	+	.	ID=id1443;Note=PS00142 Neutral zinc metallopeptidases%2C zinc-binding region signature.;Dbxref=GeneID:1174940;gbkey=misc_feature
NC_003143.1	RefSeq	gene	2374643	2375092	.	+	.	ID=gene2031;Name=YPO2102;Dbxref=GeneID:1174941;gbkey=Gene;locus_tag=YPO2102
NC_003143.1	RefSeq	CDS	2374643	2375092	.	+	0	ID=cds1938;Name=YP_002347084.1;Parent=gene2031;Dbxref=UniProtKB%2FTrEMBL:Q7CIE1,Genbank:YP_002347084.1,GeneID:1174941;gbkey=CDS;product=hypothetical protein;protein_id=YP_002347084.1;transl_table=11
NC_003143.1	RefSeq	ribosome_entry_site	2375091	2375096	.	+	.	ID=id1444;gbkey=RBS
NC_003143.1	RefSeq	repeat_region	2375657	2376971	.	+	.	ID=id1445;Note=insertion sequence:IS285;gbkey=repeat_region
NC_003143.1	RefSeq	repeat_region	2375657	2375685	.	+	.	ID=id1446;Note=IS285 inverted repeat;gbkey=repeat_region
NC_003143.1	RefSeq	gene	2375728	2376936	.	+	.	ID=gene2032;Name=y1062;Dbxref=GeneID:1174943;gbkey=Gene;gene=y1062;gene_synonym=ypmt1.80C;locus_tag=YPO2104
NC_003143.1	RefSeq	CDS	2375728	2376936	.	+	0	ID=cds1939;Name=YP_002347085.1;Parent=gene2032;Dbxref=InterPro:IPR001207,UniProtKB%2FTrEMBL:Q7ARB0,Genbank:YP_002347085.1,GeneID:1174943;gbkey=CDS;gene=y1062;product=transposase for the IS285 insertion element;protein_id=YP_002347085.1;transl_table=11
NC_003143.1	RefSeq	region	2376421	2376495	.	+	.	ID=id1447;Note=PS01007 Transposases%2C Mutator family%2C signature.;Dbxref=GeneID:1174943;gbkey=misc_feature;gene=y1062
NC_003143.1	RefSeq	gene	2376941	2377915	.	+	.	ID=gene2033;Name=YPO2104a;Dbxref=GeneID:16744763;gbkey=Gene;locus_tag=YPO2104a
NC_003143.1	RefSeq	CDS	2376941	2377915	.	+	0	ID=cds1940;Name=YP_008479713.1;Parent=gene2033;Dbxref=Genbank:YP_008479713.1,GeneID:16744763;gbkey=CDS;product=hypothetical protein;protein_id=YP_008479713.1;transl_table=11
NC_003143.1	RefSeq	repeat_region	2376943	2376971	.	-	.	ID=id1448;Note=IS285 inverted repeat;gbkey=repeat_region
NC_003143.1	RefSeq	gene	2377915	2379300	.	+	.	ID=gene2034;Name=YPO2106;Dbxref=GeneID:1174944;gbkey=Gene;locus_tag=YPO2106;pseudo=true
NC_003143.1	RefSeq	region	2377915	2378640	.	+	.	ID=id1449;Note=Similar to the N-terminal region of bacteriophage MB78 60 kDa protein gp62 TR:Q9T0Q3 %28EMBL:Y19202%29 %28540 aa%29 fasta scores: E%28%29: 1.5e-19%2C 30.689%25 id in 479 aa. CDS contains a nonsence mutation %28ochre%29 after codon 242;Dbxref=GeneID:1174944;gbkey=misc_feature;part=1%2F2;pseudo=true
NC_003143.1	RefSeq	region	2378644	2379300	.	+	.	ID=id1449;Note=Similar to the N-terminal region of bacteriophage MB78 60 kDa protein gp62 TR:Q9T0Q3 %28EMBL:Y19202%29 %28540 aa%29 fasta scores: E%28%29: 1.5e-19%2C 30.689%25 id in 479 aa. CDS contains a nonsence mutation %28ochre%29 after codon 242;Dbxref=GeneID:1174944;gbkey=misc_feature;part=2%2F2;pseudo=true
NC_003143.1	RefSeq	gene	2379304	2380416	.	+	.	ID=gene2035;Name=YPO2108;Dbxref=GeneID:1174945;gbkey=Gene;locus_tag=YPO2108
NC_003143.1	RefSeq	CDS	2379304	2380416	.	+	0	ID=cds1941;Name=YP_002347086.1;Parent=gene2035;Dbxref=UniProtKB%2FTrEMBL:Q7CIE3,Genbank:YP_002347086.1,GeneID:1174945;gbkey=CDS;product=hypothetical protein;protein_id=YP_002347086.1;transl_table=11
NC_003143.1	RefSeq	gene	2380538	2381311	.	+	.	ID=gene2036;Name=YPO2109;Dbxref=GeneID:1174946;gbkey=Gene;locus_tag=YPO2109
NC_003143.1	RefSeq	CDS	2380538	2381311	.	+	0	ID=cds1942;Name=YP_002347087.1;Parent=gene2036;Dbxref=UniProtKB%2FTrEMBL:Q7CIE4,Genbank:YP_002347087.1,GeneID:1174946;gbkey=CDS;product=hypothetical protein;protein_id=YP_002347087.1;transl_table=11
NC_003143.1	RefSeq	gene	2381325	2382530	.	+	.	ID=gene2037;Name=YPO2110;Dbxref=GeneID:1174947;gbkey=Gene;locus_tag=YPO2110
NC_003143.1	RefSeq	CDS	2381325	2382530	.	+	0	ID=cds1943;Name=YP_002347088.1;Parent=gene2037;Dbxref=InterPro:IPR003343,InterPro:IPR008964,UniProtKB%2FTrEMBL:Q7CIE5,Genbank:YP_002347088.1,GeneID:1174947;gbkey=CDS;product=hypothetical protein;protein_id=YP_002347088.1;transl_table=11
NC_003143.1	RefSeq	gene	2382530	2383060	.	+	.	ID=gene2038;Name=YPO2111;Dbxref=GeneID:1174948;gbkey=Gene;locus_tag=YPO2111
NC_003143.1	RefSeq	CDS	2382530	2383060	.	+	0	ID=cds1944;Name=YP_002347089.1;Parent=gene2038;Dbxref=UniProtKB%2FTrEMBL:Q0WF49,Genbank:YP_002347089.1,GeneID:1174948;gbkey=CDS;product=hypothetical protein;protein_id=YP_002347089.1;transl_table=11
NC_003143.1	RefSeq	ribosome_entry_site	2383048	2383051	.	+	.	ID=id1450;Dbxref=GeneID:1174948;gbkey=RBS
NC_003143.1	RefSeq	gene	2383057	2383311	.	+	.	ID=gene2039;Name=YPO2112;Dbxref=GeneID:1174949;gbkey=Gene;locus_tag=YPO2112
NC_003143.1	RefSeq	CDS	2383057	2383311	.	+	0	ID=cds1945;Name=YP_002347090.1;Parent=gene2039;Dbxref=UniProtKB%2FTrEMBL:Q7CIE6,Genbank:YP_002347090.1,GeneID:1174949;gbkey=CDS;product=hypothetical protein;protein_id=YP_002347090.1;transl_table=11
NC_003143.1	RefSeq	gene	2383313	2383663	.	+	.	ID=gene2040;Name=YPO2113;Dbxref=GeneID:1174950;gbkey=Gene;locus_tag=YPO2113
NC_003143.1	RefSeq	CDS	2383313	2383663	.	+	0	ID=cds1946;Name=YP_002347091.1;Parent=gene2040;Dbxref=UniProtKB%2FTrEMBL:Q7CIE7,Genbank:YP_002347091.1,GeneID:1174950;gbkey=CDS;product=hypothetical protein;protein_id=YP_002347091.1;transl_table=11
NC_003143.1	RefSeq	ribosome_entry_site	2383654	2383657	.	+	.	ID=id1451;Dbxref=GeneID:1174950;gbkey=RBS
NC_003143.1	RefSeq	gene	2383665	2384249	.	+	.	ID=gene2041;Name=YPO2114;Dbxref=GeneID:1174951;gbkey=Gene;locus_tag=YPO2114
NC_003143.1	RefSeq	CDS	2383665	2384249	.	+	0	ID=cds1947;Name=YP_002347092.1;Parent=gene2041;Dbxref=UniProtKB%2FTrEMBL:Q7CIE8,Genbank:YP_002347092.1,GeneID:1174951;gbkey=CDS;product=hypothetical protein;protein_id=YP_002347092.1;transl_table=11
NC_003143.1	RefSeq	ribosome_entry_site	2384235	2384241	.	+	.	ID=id1452;Dbxref=GeneID:1174951;gbkey=RBS
NC_003143.1	RefSeq	gene	2384246	2384653	.	+	.	ID=gene2042;Name=YPO2115;Dbxref=GeneID:1174952;gbkey=Gene;locus_tag=YPO2115
NC_003143.1	RefSeq	CDS	2384246	2384653	.	+	0	ID=cds1948;Name=YP_002347093.1;Parent=gene2042;Dbxref=UniProtKB%2FTrEMBL:Q7CIE9,Genbank:YP_002347093.1,GeneID:1174952;gbkey=CDS;product=hypothetical protein;protein_id=YP_002347093.1;transl_table=11
NC_003143.1	RefSeq	ribosome_entry_site	2384708	2384711	.	+	.	ID=id1453;gbkey=RBS
NC_003143.1	RefSeq	gene	2384719	2385639	.	+	.	ID=gene2043;Name=YPO2116;Dbxref=GeneID:1174953;gbkey=Gene;locus_tag=YPO2116
NC_003143.1	RefSeq	CDS	2384719	2385639	.	+	0	ID=cds1949;Name=YP_002347094.1;Parent=gene2043;Dbxref=InterPro:IPR003343,InterPro:IPR008964,UniProtKB%2FTrEMBL:Q7CIF0,Genbank:YP_002347094.1,GeneID:1174953;gbkey=CDS;product=hypothetical protein;protein_id=YP_002347094.1;transl_table=11
NC_003143.1	RefSeq	gene	2385652	2385963	.	+	.	ID=gene2044;Name=YPO2117;Dbxref=GeneID:1174954;gbkey=Gene;locus_tag=YPO2117
NC_003143.1	RefSeq	CDS	2385652	2385963	.	+	0	ID=cds1950;Name=YP_002347095.1;Parent=gene2044;Dbxref=UniProtKB%2FTrEMBL:Q7CIF1,Genbank:YP_002347095.1,GeneID:1174954;gbkey=CDS;product=hypothetical protein;protein_id=YP_002347095.1;transl_table=11
NC_003143.1	RefSeq	gene	2386050	2386271	.	+	.	ID=gene2045;Name=YPO2118;Dbxref=GeneID:1174955;gbkey=Gene;locus_tag=YPO2118
NC_003143.1	RefSeq	CDS	2386050	2386271	.	+	0	ID=cds1951;Name=YP_002347096.1;Parent=gene2045;Dbxref=UniProtKB%2FTrEMBL:Q0WF42,Genbank:YP_002347096.1,GeneID:1174955;gbkey=CDS;product=hypothetical protein;protein_id=YP_002347096.1;transl_table=11
NC_003143.1	RefSeq	ribosome_entry_site	2386261	2386264	.	+	.	ID=id1454;Dbxref=GeneID:1174955;gbkey=RBS
NC_003143.1	RefSeq	gene	2386272	2389775	.	+	.	ID=gene2046;Name=YPO2119;Dbxref=GeneID:1174956;gbkey=Gene;locus_tag=YPO2119
NC_003143.1	RefSeq	CDS	2386272	2389775	.	+	0	ID=cds1952;Name=YP_002347097.1;Parent=gene2046;Dbxref=InterPro:IPR006431,InterPro:IPR009628,InterPro:IPR010978,UniProtKB%2FTrEMBL:Q7CIF2,Genbank:YP_002347097.1,GeneID:1174956;gbkey=CDS;product=phage tail protein;protein_id=YP_002347097.1;transl_table=11
NC_003143.1	RefSeq	gene	2389778	2390119	.	+	.	ID=gene2047;Name=YPO2120;Dbxref=GeneID:1174957;gbkey=Gene;locus_tag=YPO2120
NC_003143.1	RefSeq	CDS	2389778	2390119	.	+	0	ID=cds1953;Name=YP_002347098.1;Parent=gene2047;Dbxref=InterPro:IPR010265,UniProtKB%2FTrEMBL:Q7CIF3,Genbank:YP_002347098.1,GeneID:1174957;gbkey=CDS;product=hypothetical protein;protein_id=YP_002347098.1;transl_table=11
NC_003143.1	RefSeq	repeat_region	2390279	2390990	.	+	.	ID=id1455;Note=Contains a %27A%27 at nucleotide position 315%7EIS200-like insertion sequence:IS1541;gbkey=repeat_region
NC_003143.1	RefSeq	gene	2390424	2390882	.	+	.	ID=gene2048;Name=tnp;Dbxref=GeneID:1174958;gbkey=Gene;gene=tnp;locus_tag=YPO2121
NC_003143.1	RefSeq	CDS	2390424	2390882	.	+	0	ID=cds1954;Name=YP_002347099.1;Parent=gene2048;Dbxref=InterPro:IPR002686,UniProtKB%2FTrEMBL:Q56938,Genbank:YP_002347099.1,GeneID:1174958;gbkey=CDS;gene=tnp;product=transposase for the IS1541 insertion element;protein_id=YP_002347099.1;transl_table=11
NC_003143.1	RefSeq	gene	2391003	2391755	.	+	.	ID=gene2049;Name=YPO2122;Dbxref=GeneID:1174959;gbkey=Gene;locus_tag=YPO2122
NC_003143.1	RefSeq	CDS	2391003	2391755	.	+	0	ID=cds1955;Name=YP_002347100.1;Parent=gene2049;Dbxref=InterPro:IPR006487,UniProtKB%2FTrEMBL:Q7CIF4,Genbank:YP_002347100.1,GeneID:1174959;gbkey=CDS;product=hypothetical protein;protein_id=YP_002347100.1;transl_table=11
NC_003143.1	RefSeq	ribosome_entry_site	2391749	2391753	.	+	.	ID=id1456;Dbxref=GeneID:1174959;gbkey=RBS
NC_003143.1	RefSeq	gene	2391758	2392468	.	+	.	ID=gene2050;Name=YPO2123;Dbxref=GeneID:1174960;gbkey=Gene;locus_tag=YPO2123
NC_003143.1	RefSeq	CDS	2391758	2392468	.	+	0	ID=cds1956;Name=YP_002347101.1;Parent=gene2050;Dbxref=InterPro:IPR000064,InterPro:IPR000555,UniProtKB%2FTrEMBL:Q7CIF5,Genbank:YP_002347101.1,GeneID:1174960;gbkey=CDS;product=phage minor tail protein;protein_id=YP_002347101.1;transl_table=11
NC_003143.1	RefSeq	ribosome_entry_site	2392719	2392724	.	+	.	ID=id1457;gbkey=RBS
NC_003143.1	RefSeq	gene	2392729	2393361	.	+	.	ID=gene2051;Name=YPO2124;Dbxref=GeneID:1174961;gbkey=Gene;locus_tag=YPO2124
NC_003143.1	RefSeq	CDS	2392729	2393361	.	+	0	ID=cds1957;Name=YP_002347102.1;Parent=gene2051;Dbxref=UniProtKB%2FTrEMBL:Q7CIF6,Genbank:YP_002347102.1,GeneID:1174961;gbkey=CDS;product=hypothetical protein;protein_id=YP_002347102.1;transl_table=11
NC_003143.1	RefSeq	gene	2394149	2395243	.	+	.	ID=gene2052;Name=YPO2126;Dbxref=GeneID:1174963;gbkey=Gene;locus_tag=YPO2126
NC_003143.1	RefSeq	CDS	2394149	2395243	.	+	0	ID=cds1958;Name=YP_002347104.1;Parent=gene2052;Dbxref=InterPro:IPR003497,UniProtKB%2FTrEMBL:Q7CIF7,Genbank:YP_002347104.1,GeneID:1174963;gbkey=CDS;product=hypothetical protein;protein_id=YP_002347104.1;transl_table=11
NC_003143.1	RefSeq	gene	2395342	2395893	.	+	.	ID=gene2053;Name=YPO2127;Dbxref=GeneID:1174964;gbkey=Gene;locus_tag=YPO2127
NC_003143.1	RefSeq	CDS	2395342	2395893	.	+	0	ID=cds1959;Name=YP_002347105.1;Parent=gene2053;Dbxref=UniProtKB%2FTrEMBL:Q7CIF8,Genbank:YP_002347105.1,GeneID:1174964;gbkey=CDS;product=phage-like membrane protein;protein_id=YP_002347105.1;transl_table=11
NC_003143.1	RefSeq	gene	2395901	2396251	.	+	.	ID=gene2054;Name=YPO2128;Dbxref=GeneID:1174965;gbkey=Gene;locus_tag=YPO2128
NC_003143.1	RefSeq	CDS	2395901	2396251	.	+	0	ID=cds1960;Name=YP_002347106.1;Parent=gene2054;Dbxref=UniProtKB%2FTrEMBL:Q0WF32,Genbank:YP_002347106.1,GeneID:1174965;gbkey=CDS;product=phage-like lipoprotein;protein_id=YP_002347106.1;transl_table=11
NC_003143.1	RefSeq	region	2395916	2395948	.	+	.	ID=id1458;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site.;Dbxref=GeneID:1174965;gbkey=misc_feature
NC_003143.1	RefSeq	ribosome_entry_site	2396298	2396301	.	+	.	ID=id1459;gbkey=RBS
NC_003143.1	RefSeq	gene	2396307	2396927	.	+	.	ID=gene2055;Name=YPO2129;Dbxref=GeneID:1174966;gbkey=Gene;locus_tag=YPO2129
NC_003143.1	RefSeq	CDS	2396307	2396927	.	+	0	ID=cds1961;Name=YP_002347107.1;Parent=gene2055;Dbxref=InterPro:IPR010654,UniProtKB%2FTrEMBL:Q7CIF9,Genbank:YP_002347107.1,GeneID:1174966;gbkey=CDS;product=phage tail assembly protein;protein_id=YP_002347107.1;transl_table=11
NC_003143.1	RefSeq	region	2396814	2396885	.	+	.	ID=id1460;Note=PS00583 pfkB family of carbohydrate kinases signature 1.;Dbxref=GeneID:1174966;gbkey=misc_feature
NC_003143.1	RefSeq	gene	2397499	2400702	.	+	.	ID=gene2056;Name=YPO2131;Dbxref=GeneID:1174968;gbkey=Gene;locus_tag=YPO2131
NC_003143.1	RefSeq	CDS	2397499	2400702	.	+	0	ID=cds1962;Name=YP_002347109.1;Parent=gene2056;Dbxref=InterPro:IPR003961,InterPro:IPR008957,UniProtKB%2FTrEMBL:Q7CIG0,Genbank:YP_002347109.1,GeneID:1174968;gbkey=CDS;product=phage host specificity protein;protein_id=YP_002347109.1;transl_table=11
NC_003143.1	RefSeq	gene	2400702	2401700	.	+	.	ID=gene2057;Name=YPO2132;Dbxref=GeneID:1174969;gbkey=Gene;locus_tag=YPO2132
NC_003143.1	RefSeq	CDS	2400702	2401700	.	+	0	ID=cds1963;Name=YP_002347110.1;Parent=gene2057;Dbxref=UniProtKB%2FTrEMBL:Q0WF28,Genbank:YP_002347110.1,GeneID:1174969;gbkey=CDS;product=hypothetical protein;protein_id=YP_002347110.1;transl_table=11
NC_003143.1	RefSeq	gene	2401717	2402634	.	+	.	ID=gene2058;Name=YPO2133;Dbxref=GeneID:1174970;gbkey=Gene;locus_tag=YPO2133
NC_003143.1	RefSeq	CDS	2401717	2402634	.	+	0	ID=cds1964;Name=YP_002347111.1;Parent=gene2058;Dbxref=UniProtKB%2FTrEMBL:Q7CIG1,Genbank:YP_002347111.1,GeneID:1174970;gbkey=CDS;product=hypothetical protein;protein_id=YP_002347111.1;transl_table=11
NC_003143.1	RefSeq	ribosome_entry_site	2402636	2402639	.	+	.	ID=id1461;gbkey=RBS
NC_003143.1	RefSeq	gene	2402645	2403064	.	+	.	ID=gene2059;Name=YPO2134;Dbxref=GeneID:1174971;gbkey=Gene;locus_tag=YPO2134
NC_003143.1	RefSeq	CDS	2402645	2403064	.	+	0	ID=cds1965;Name=YP_002347112.1;Parent=gene2059;Dbxref=InterPro:IPR003458,UniProtKB%2FTrEMBL:Q7CIG2,Genbank:YP_002347112.1,GeneID:1174971;gbkey=CDS;product=phage tail fiber assembly protein;protein_id=YP_002347112.1;transl_table=11
NC_003143.1	RefSeq	gene	2403061	2403216	.	+	.	ID=gene2060;Name=YPO2135;Dbxref=GeneID:1174972;gbkey=Gene;locus_tag=YPO2135
NC_003143.1	RefSeq	CDS	2403061	2403216	.	+	0	ID=cds1966;Name=YP_002347113.1;Parent=gene2060;Dbxref=UniProtKB%2FTrEMBL:Q0WF25,Genbank:YP_002347113.1,GeneID:1174972;gbkey=CDS;product=hypothetical protein;protein_id=YP_002347113.1;transl_table=11
NC_003143.1	RefSeq	repeat_region	2403250	2404564	.	-	.	ID=id1462;Note=insertion sequence:IS285;gbkey=repeat_region
NC_003143.1	RefSeq	repeat_region	2403250	2403278	.	+	.	ID=id1463;Note=IS285 inverted repeat;gbkey=repeat_region
NC_003143.1	RefSeq	gene	2403285	2404493	.	-	.	ID=gene2061;Name=y1062;Dbxref=GeneID:1174973;gbkey=Gene;gene=y1062;gene_synonym=ypmt1.80C;locus_tag=YPO2136
NC_003143.1	RefSeq	CDS	2403285	2404493	.	-	0	ID=cds1967;Name=YP_002347114.1;Parent=gene2061;Dbxref=InterPro:IPR001207,UniProtKB%2FTrEMBL:Q7ARB0,Genbank:YP_002347114.1,GeneID:1174973;gbkey=CDS;gene=y1062;product=transposase for the IS285 insertion element;protein_id=YP_002347114.1;transl_table=11
NC_003143.1	RefSeq	region	2403726	2403800	.	-	.	ID=id1464;Note=PS01007 Transposases%2C Mutator family%2C signature.;Dbxref=GeneID:1174973;gbkey=misc_feature;gene=y1062
NC_003143.1	RefSeq	repeat_region	2404536	2404564	.	-	.	ID=id1465;Note=IS285 inverted repeat;gbkey=repeat_region
NC_003143.1	RefSeq	gene	2404798	2405970	.	-	.	ID=gene2062;Name=YPO2137;Dbxref=GeneID:1174974;gbkey=Gene;locus_tag=YPO2137
NC_003143.1	RefSeq	CDS	2404798	2405970	.	-	0	ID=cds1968;Name=YP_002347115.1;Parent=gene2062;Dbxref=InterPro:IPR011701,UniProtKB%2FTrEMBL:Q7CIG4,Genbank:YP_002347115.1,GeneID:1174974;gbkey=CDS;product=hypothetical protein;protein_id=YP_002347115.1;transl_table=11
NC_003143.1	RefSeq	gene	2405974	2407173	.	-	.	ID=gene2063;Name=YPO2138;Dbxref=GeneID:1174975;gbkey=Gene;locus_tag=YPO2138
NC_003143.1	RefSeq	CDS	2405974	2407173	.	-	0	ID=cds1969;Name=YP_002347116.1;Parent=gene2063;Dbxref=InterPro:IPR000192,UniProtKB%2FTrEMBL:Q7CIG5,Genbank:YP_002347116.1,GeneID:1174975;gbkey=CDS;product=aminotransferase;protein_id=YP_002347116.1;transl_table=11
NC_003143.1	RefSeq	ribosome_entry_site	2405979	2405984	.	-	.	ID=id1466;Dbxref=GeneID:1174975;gbkey=RBS
NC_003143.1	RefSeq	gene	2407190	2407930	.	-	.	ID=gene2064;Name=YPO2139;Dbxref=GeneID:1174976;gbkey=Gene;locus_tag=YPO2139
NC_003143.1	RefSeq	CDS	2407190	2407930	.	-	0	ID=cds1970;Name=YP_002347117.1;Parent=gene2064;Dbxref=UniProtKB%2FTrEMBL:Q0WF21,Genbank:YP_002347117.1,GeneID:1174976;gbkey=CDS;product=hypothetical protein;protein_id=YP_002347117.1;transl_table=11
NC_003143.1	RefSeq	gene	2409022	2409378	.	+	.	ID=gene2065;Name=YPO2140;Dbxref=GeneID:1174977;gbkey=Gene;locus_tag=YPO2140
NC_003143.1	RefSeq	CDS	2409022	2409378	.	+	0	ID=cds1971;Name=YP_002347118.1;Parent=gene2065;Dbxref=UniProtKB%2FTrEMBL:Q7CIG6,Genbank:YP_002347118.1,GeneID:1174977;gbkey=CDS;product=hypothetical protein;protein_id=YP_002347118.1;transl_table=11
NC_003143.1	RefSeq	gene	2409795	2410325	.	-	.	ID=gene2066;Name=dsbB;Dbxref=GeneID:1174978;gbkey=Gene;gene=dsbB;gene_synonym=roxB;locus_tag=YPO2141
NC_003143.1	RefSeq	CDS	2409795	2410325	.	-	0	ID=cds1972;Name=YP_002347119.1;Parent=gene2066;Note=disulfide oxidoreductase%3B integral membrane protein%3B required for perioplasmic disulfide bond formation%3B oxidizes DsbA protein;Dbxref=InterPro:IPR003752,InterPro:IPR012139,UniProtKB%2FTrEMBL:Q0WF19,Genbank:YP_002347119.1,GeneID:1174978;gbkey=CDS;gene=dsbB;product=disulfide bond formation protein B;protein_id=YP_002347119.1;transl_table=11
NC_003143.1	RefSeq	gene	2410561	2412135	.	-	.	ID=gene2067;Name=nhaB;Dbxref=GeneID:1174979;gbkey=Gene;gene=nhaB;locus_tag=YPO2142
NC_003143.1	RefSeq	CDS	2410561	2412135	.	-	0	ID=cds1973;Name=YP_002347120.1;Parent=gene2067;Note=involved in regulation of intracellular pH under alkaline conditions;Dbxref=InterPro:IPR004671,UniProtKB%2FTrEMBL:Q74U12,Genbank:YP_002347120.1,GeneID:1174979;gbkey=CDS;gene=nhaB;product=sodium%2Fproton antiporter;protein_id=YP_002347120.1;transl_table=11
NC_003143.1	RefSeq	gene	2412379	2413098	.	+	.	ID=gene2068;Name=fadR;Dbxref=GeneID:1174980;gbkey=Gene;gene=fadR;gene_synonym=oleR,thdB;locus_tag=YPO2144
NC_003143.1	RefSeq	CDS	2412379	2413098	.	+	0	ID=cds1974;Name=YP_002347121.1;Parent=gene2068;Note=Multifunctional regulator of fatty acid metabolism;Dbxref=InterPro:IPR000524,InterPro:IPR008920,UniProtKB%2FTrEMBL:Q0WF17,Genbank:YP_002347121.1,GeneID:1174980;gbkey=CDS;gene=fadR;product=fatty acid metabolism regulator;protein_id=YP_002347121.1;transl_table=11
NC_003143.1	RefSeq	gene	2413316	2414851	.	-	.	ID=gene2069;Name=YPO2145;Dbxref=GeneID:1174981;gbkey=Gene;locus_tag=YPO2145
NC_003143.1	RefSeq	CDS	2413316	2414851	.	-	0	ID=cds1975;Name=YP_002347122.1;Parent=gene2069;Dbxref=InterPro:IPR007390,UniProtKB%2FTrEMBL:Q7CIG7,Genbank:YP_002347122.1,GeneID:1174981;gbkey=CDS;product=SpoVR family protein;protein_id=YP_002347122.1;transl_table=11
NC_003143.1	RefSeq	ribosome_entry_site	2415307	2415310	.	+	.	ID=id1467;gbkey=RBS
NC_003143.1	RefSeq	gene	2415316	2416620	.	+	.	ID=gene2070;Name=dadA;Dbxref=GeneID:1174982;gbkey=Gene;gene=dadA;gene_synonym=dadR;locus_tag=YPO2147
NC_003143.1	RefSeq	CDS	2415316	2416620	.	+	0	ID=cds1976;Name=YP_002347123.1;Parent=gene2070;Note=catalyzes the oxidative deamination of D-amino acids;Dbxref=InterPro:IPR001327,InterPro:IPR006076,UniProtKB%2FTrEMBL:Q0WF15,Genbank:YP_002347123.1,GeneID:1174982;gbkey=CDS;gene=dadA;product=D-amino acid dehydrogenase small subunit;protein_id=YP_002347123.1;transl_table=11
NC_003143.1	RefSeq	gene	2416636	2417838	.	-	.	ID=gene2071;Name=YPO2148;Dbxref=GeneID:1174983;gbkey=Gene;locus_tag=YPO2148
NC_003143.1	RefSeq	CDS	2416636	2417838	.	-	0	ID=cds1977;Name=YP_002347124.1;Parent=gene2071;Dbxref=InterPro:IPR001958,InterPro:IPR004812,InterPro:IPR005829,InterPro:IPR007114,InterPro:IPR011701,UniProtKB%2FTrEMBL:Q7CIG8,Genbank:YP_002347124.1,GeneID:1174983;gbkey=CDS;product=multidrug resistance protein;protein_id=YP_002347124.1;transl_table=11
NC_003143.1	RefSeq	STS	2416820	2417505	.	+	.	ID=id1468;Dbxref=UniSTS:474270;gbkey=STS
NC_003143.1	RefSeq	region	2417617	2417667	.	-	.	ID=id1469;Note=PS00216 Sugar transport proteins signature 1.;Dbxref=GeneID:1174983;gbkey=misc_feature
NC_003143.1	RefSeq	gene	2418103	2418972	.	-	.	ID=gene2072;Name=YPO2149;Dbxref=GeneID:1174984;gbkey=Gene;locus_tag=YPO2149
NC_003143.1	RefSeq	CDS	2418103	2418972	.	-	0	ID=cds1978;Name=YP_002347125.1;Parent=gene2072;Dbxref=InterPro:IPR003829,InterPro:IPR008778,InterPro:IPR011051,InterPro:IPR012093,UniProtKB%2FTrEMBL:Q74U09,Genbank:YP_002347125.1,GeneID:1174984;gbkey=CDS;product=hypothetical protein;protein_id=YP_002347125.1;transl_table=11
NC_003143.1	RefSeq	ribosome_entry_site	2418979	2418984	.	-	.	ID=id1470;gbkey=RBS
NC_003143.1	RefSeq	ribosome_entry_site	2419161	2419164	.	+	.	ID=id1471;gbkey=RBS
NC_003143.1	RefSeq	gene	2419170	2420075	.	+	.	ID=gene2073;Name=YPO2150;Dbxref=GeneID:1174985;gbkey=Gene;locus_tag=YPO2150
NC_003143.1	RefSeq	CDS	2419170	2420075	.	+	0	ID=cds1979;Name=YP_002347126.1;Parent=gene2073;Dbxref=InterPro:IPR000847,InterPro:IPR005119,InterPro:IPR006025,InterPro:IPR011991,UniProtKB%2FTrEMBL:Q0WF12,Genbank:YP_002347126.1,GeneID:1174985;gbkey=CDS;product=LysR family transcriptional regulator;protein_id=YP_002347126.1;transl_table=11
NC_003143.1	RefSeq	region	2419218	2419283	.	+	.	ID=id1472;Note=Predicted helix-turn-helix motif with score 1228 %28%2B3.37 SD%29 at aa 17-38%2C sequence GGFSAAARVLGLPKSKLSRRLA;Dbxref=GeneID:1174985;gbkey=misc_feature
NC_003143.1	RefSeq	gene	2420110	2421231	.	-	.	ID=gene2074;Name=YPO2151;Dbxref=GeneID:1174986;gbkey=Gene;locus_tag=YPO2151
NC_003143.1	RefSeq	CDS	2420110	2421231	.	-	0	ID=cds1980;Name=YP_002347127.1;Parent=gene2074;Dbxref=InterPro:IPR000620,UniProtKB%2FTrEMBL:Q7CIG9,Genbank:YP_002347127.1,GeneID:1174986;gbkey=CDS;product=hypothetical protein;protein_id=YP_002347127.1;transl_table=11
NC_003143.1	RefSeq	repeat_region	2420116	2420152	.	-	.	ID=id1473;Note=repeat region with 2.5xCTTATGTTGATGATA repeat.;Dbxref=GeneID:1174986;gbkey=repeat_region
NC_003143.1	RefSeq	gene	2421336	2422610	.	-	.	ID=gene2075;Name=YPO2152;Dbxref=GeneID:1174987;gbkey=Gene;locus_tag=YPO2152
NC_003143.1	RefSeq	CDS	2421336	2422610	.	-	0	ID=cds1981;Name=YP_002347128.1;Parent=gene2075;Dbxref=InterPro:IPR006698,UniProtKB%2FTrEMBL:Q0WF10,Genbank:YP_002347128.1,GeneID:1174987;gbkey=CDS;product=hypothetical protein;protein_id=YP_002347128.1;transl_table=11
NC_003143.1	RefSeq	gene	2422760	2424694	.	-	.	ID=gene2076;Name=YPO2153;Dbxref=GeneID:1174988;gbkey=Gene;locus_tag=YPO2153
NC_003143.1	RefSeq	CDS	2422760	2424694	.	-	0	ID=cds1982;Name=YP_002347129.1;Parent=gene2076;Dbxref=InterPro:IPR010650,InterPro:IPR013153,UniProtKB%2FTrEMBL:Q7CIH0,Genbank:YP_002347129.1,GeneID:1174988;gbkey=CDS;product=hypothetical protein;protein_id=YP_002347129.1;transl_table=11
NC_003143.1	RefSeq	region	2424344	2424367	.	-	.	ID=id1474;Note=PS00017 ATP%2FGTP-binding site motif A %28P-loop%29.;Dbxref=GeneID:1174988;gbkey=misc_feature
NC_003143.1	RefSeq	gene	2425117	2425887	.	+	.	ID=gene2077;Name=YPO2155;Dbxref=GeneID:1174989;gbkey=Gene;locus_tag=YPO2155
NC_003143.1	RefSeq	CDS	2425117	2425887	.	+	0	ID=cds1983;Name=YP_002347130.1;Parent=gene2077;Dbxref=InterPro:IPR010583,UniProtKB%2FTrEMBL:Q7CIH1,Genbank:YP_002347130.1,GeneID:1174989;gbkey=CDS;product=hypothetical protein;protein_id=YP_002347130.1;transl_table=11
NC_003143.1	RefSeq	gene	2425960	2426835	.	-	.	ID=gene2078;Name=YPO2156;Dbxref=GeneID:1174990;gbkey=Gene;locus_tag=YPO2156
NC_003143.1	RefSeq	CDS	2425960	2426835	.	-	0	ID=cds1984;Name=YP_002347131.1;Parent=gene2078;Dbxref=InterPro:IPR008183,InterPro:IPR011013,UniProtKB%2FTrEMBL:Q7CIH2,Genbank:YP_002347131.1,GeneID:1174990;gbkey=CDS;product=hypothetical protein;protein_id=YP_002347131.1;transl_table=11
NC_003143.1	RefSeq	gene	2427149	2428153	.	-	.	ID=gene2079;Name=gapA;Dbxref=GeneID:1174991;gbkey=Gene;gene=gapA;locus_tag=YPO2157
NC_003143.1	RefSeq	CDS	2427149	2428153	.	-	0	ID=cds1985;Name=YP_002347132.1;Parent=gene2079;Dbxref=InterPro:IPR000173,InterPro:IPR006424,UniProtKB%2FTrEMBL:Q7CIH3,Genbank:YP_002347132.1,GeneID:1174991;gbkey=CDS;gene=gapA;product=glyceraldehyde 3-phosphate dehydrogenase A;protein_id=YP_002347132.1;transl_table=11
NC_003143.1	RefSeq	region	2427680	2427703	.	-	.	ID=id1475;Note=PS00071 Glyceraldehyde 3-phosphate dehydrogenase active site.;Dbxref=GeneID:1174991;gbkey=misc_feature;gene=gapA
NC_003143.1	RefSeq	gene	2428492	2428905	.	+	.	ID=gene2080;Name=YPO2158;Dbxref=GeneID:1174992;gbkey=Gene;locus_tag=YPO2158
NC_003143.1	RefSeq	CDS	2428492	2428905	.	+	0	ID=cds1986;Name=YP_002347133.1;Parent=gene2080;Note=this stereospecific enzymes reduces the R isomer of methionine sulfoxide while MsrA reduces the S form%3B provides protection against oxidative stress;Dbxref=InterPro:IPR002579,InterPro:IPR011057,UniProtKB%2FTrEMBL:Q0WF05,Genbank:YP_002347133.1,GeneID:1174992;gbkey=CDS;product=methionine sulfoxide reductase B;protein_id=YP_002347133.1;transl_table=11
NC_003143.1	RefSeq	ribosome_entry_site	2428964	2428967	.	+	.	ID=id1476;gbkey=RBS
NC_003143.1	RefSeq	gene	2428976	2429248	.	+	.	ID=gene2081;Name=YPO2159;Dbxref=GeneID:1174993;gbkey=Gene;locus_tag=YPO2159
NC_003143.1	RefSeq	CDS	2428976	2429248	.	+	0	ID=cds1987;Name=YP_002347134.1;Parent=gene2081;Dbxref=InterPro:IPR009749,UniProtKB%2FTrEMBL:Q0WF04,Genbank:YP_002347134.1,GeneID:1174993;gbkey=CDS;product=hypothetical protein;protein_id=YP_002347134.1;transl_table=11
NC_003143.1	RefSeq	gene	2429382	2430029	.	-	.	ID=gene2082;Name=pncA;Dbxref=GeneID:1174994;gbkey=Gene;gene=pncA;locus_tag=YPO2160
NC_003143.1	RefSeq	CDS	2429382	2430029	.	-	0	ID=cds1988;Name=YP_002347135.1;Parent=gene2082;Note=catalyzes the formation of nicotinate from nicotinamide in NAD biosynthesis and the formation of pyrazinoate from pyrazinamide;Dbxref=InterPro:IPR000868,UniProtKB%2FTrEMBL:Q7CIH4,Genbank:YP_002347135.1,GeneID:1174994;gbkey=CDS;gene=pncA;product=nicotinamidase%2Fpyrazinamidase;protein_id=YP_002347135.1;transl_table=11
NC_003143.1	RefSeq	gene	2430044	2431060	.	-	.	ID=gene2083;Name=ansA;Dbxref=GeneID:1174995;gbkey=Gene;gene=ansA;locus_tag=YPO2161
NC_003143.1	RefSeq	CDS	2430044	2431060	.	-	0	ID=cds1989;Name=YP_002347136.1;Parent=gene2083;Note=converts asparagine to aspartate and ammonia;Dbxref=InterPro:IPR006033,InterPro:IPR006034,UniProtKB%2FTrEMBL:Q7CIH5,Genbank:YP_002347136.1,GeneID:1174995;gbkey=CDS;gene=ansA;product=cytoplasmic asparaginase I;protein_id=YP_002347136.1;transl_table=11
NC_003143.1	RefSeq	region	2430779	2430811	.	-	.	ID=id1477;Note=PS00917 Asparaginase %2F glutaminase active site signature 2.;Dbxref=GeneID:1174995;gbkey=misc_feature;gene=ansA
NC_003143.1	RefSeq	region	2431013	2431039	.	-	.	ID=id1478;Note=PS00144 Asparaginase %2F glutaminase active site signature 1.;Dbxref=GeneID:1174995;gbkey=misc_feature;gene=ansA
NC_003143.1	RefSeq	gene	2431177	2433027	.	-	.	ID=gene2084;Name=sppA;Dbxref=GeneID:1174996;gbkey=Gene;gene=sppA;locus_tag=YPO2162
NC_003143.1	RefSeq	CDS	2431177	2433027	.	-	0	ID=cds1990;Name=YP_002347137.1;Parent=gene2084;Note=SppA%3B catalyzes the degradation of cleaved signal peptides%3B essential to maintain secretion of mature proteins across the membrane;Dbxref=InterPro:IPR002142,InterPro:IPR004634,InterPro:IPR004635,UniProtKB%2FTrEMBL:Q7CIH6,Genbank:YP_002347137.1,GeneID:1174996;gbkey=CDS;gene=sppA;product=protease 4;protein_id=YP_002347137.1;transl_table=11
NC_003143.1	RefSeq	region	2432899	2432964	.	-	.	ID=id1479;Note=1 probable transmembrane helix predicted;Dbxref=GeneID:1174996;gbkey=misc_feature;gene=sppA
NC_003143.1	RefSeq	ribosome_entry_site	2433178	2433183	.	+	.	ID=id1480;gbkey=RBS
NC_003143.1	RefSeq	gene	2433190	2433741	.	+	.	ID=gene2085;Name=YPO2163;Dbxref=GeneID:1174997;gbkey=Gene;locus_tag=YPO2163
NC_003143.1	RefSeq	CDS	2433190	2433741	.	+	0	ID=cds1991;Name=YP_002347138.1;Parent=gene2085;Dbxref=InterPro:IPR000415,UniProtKB%2FTrEMBL:Q7CIH7,Genbank:YP_002347138.1,GeneID:1174997;gbkey=CDS;product=hypothetical protein;protein_id=YP_002347138.1;transl_table=11
NC_003143.1	RefSeq	ribosome_entry_site	2433956	2433959	.	+	.	ID=id1481;gbkey=RBS
NC_003143.1	RefSeq	gene	2433966	2435012	.	+	.	ID=gene2086;Name=selD;Dbxref=GeneID:1174998;gbkey=Gene;gene=selD;locus_tag=YPO2164
NC_003143.1	RefSeq	CDS	2433966	2435012	.	+	0	ID=cds1992;Name=YP_002347139.1;Parent=gene2086;Note=catalyzes the formation of selenophosphate from selenide and ATP;Dbxref=InterPro:IPR000728,InterPro:IPR004536,InterPro:IPR010918,UniProtKB%2FTrEMBL:Q0WEZ9,Genbank:YP_002347139.1,GeneID:1174998;gbkey=CDS;gene=selD;product=selenophosphate synthetase;protein_id=YP_002347139.1;transl_table=11
NC_003143.1	RefSeq	region	2433990	2434022	.	+	.	ID=id1482;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site.;Dbxref=GeneID:1174998;gbkey=misc_feature;gene=selD
NC_003143.1	RefSeq	gene	2435071	2436999	.	+	.	ID=gene2087;Name=topB;Dbxref=GeneID:1174999;gbkey=Gene;gene=topB;locus_tag=YPO2165
NC_003143.1	RefSeq	CDS	2435071	2436999	.	+	0	ID=cds1993;Name=YP_002347140.1;Parent=gene2087;Note=decatenates replicating daughter chromosomes;Dbxref=InterPro:IPR000380,InterPro:IPR003601,InterPro:IPR003602,InterPro:IPR005738,InterPro:IPR006154,InterPro:IPR006171,InterPro:IPR013497,InterPro:IPR013824,UniProtKB%2FTrEMBL:Q0WEZ8,Genbank:YP_002347140.1,GeneID:1174999;gbkey=CDS;gene=topB;product=DNA topoisomerase III;protein_id=YP_002347140.1;transl_table=11
NC_003143.1	RefSeq	region	2435959	2436024	.	+	.	ID=id1483;Note=Predicted helix-turn-helix motif with score 1028 %28%2B2.69 SD%29 at aa 297-318%2C sequence TLQIEAAKRFGLSAQQVLDICQ;Dbxref=GeneID:1174999;gbkey=misc_feature;gene=topB
NC_003143.1	RefSeq	region	2436022	2436069	.	+	.	ID=id1484;Note=PS00396 Prokaryotic DNA topoisomerase I active site.;Dbxref=GeneID:1174999;gbkey=misc_feature;gene=topB
NC_003143.1	RefSeq	ribosome_entry_site	2436980	2436987	.	+	.	ID=id1485;Dbxref=GeneID:1174999;gbkey=RBS;gene=topB
NC_003143.1	RefSeq	gene	2436996	2437286	.	+	.	ID=gene2088;Name=topB;Dbxref=GeneID:1175000;gbkey=Gene;gene=topB;locus_tag=YPO2166
NC_003143.1	RefSeq	CDS	2436996	2437286	.	+	0	ID=cds1994;Name=YP_002347141.1;Parent=gene2088;Dbxref=InterPro:IPR009971,UniProtKB%2FTrEMBL:Q7CIH8,Genbank:YP_002347141.1,GeneID:1175000;gbkey=CDS;product=hypothetical protein;protein_id=YP_002347141.1;transl_table=11
NC_003143.1	RefSeq	gene	2437299	2437685	.	-	.	ID=gene2089;Name=nudG;Dbxref=GeneID:1175001;gbkey=Gene;gene=nudG;locus_tag=YPO2167
NC_003143.1	RefSeq	CDS	2437299	2437685	.	-	0	ID=cds1995;Name=YP_002347142.1;Parent=gene2089;Dbxref=InterPro:IPR000086,UniProtKB%2FTrEMBL:Q7CIH9,Genbank:YP_002347142.1,GeneID:1175001;gbkey=CDS;gene=nudG;product=pyrimidine %28deoxy%29nucleoside triphosphate pyrophosphohydrolase;protein_id=YP_002347142.1;transl_table=11
NC_003143.1	RefSeq	region	2437524	2437583	.	-	.	ID=id1486;Note=PS00893 mutT domain signature.;Dbxref=GeneID:1175001;gbkey=misc_feature;gene=nudG
NC_003143.1	RefSeq	gene	2437783	2438589	.	-	.	ID=gene2090;Name=xthA;Dbxref=GeneID:1175002;gbkey=Gene;gene=xthA;locus_tag=YPO2168
NC_003143.1	RefSeq	CDS	2437783	2438589	.	-	0	ID=cds1996;Name=YP_002347143.1;Parent=gene2090;Note=removes the damaged DNA at cytosines and guanines by cleaving on the 3%27 side of the AP site by a beta-elimination reaction;Dbxref=InterPro:IPR000097,InterPro:IPR004808,InterPro:IPR005135,UniProtKB%2FTrEMBL:Q0WEZ5,Genbank:YP_002347143.1,GeneID:1175002;gbkey=CDS;gene=xthA;product=exonuclease III;protein_id=YP_002347143.1;transl_table=11
NC_003143.1	RefSeq	region	2437888	2437923	.	-	.	ID=id1487;Note=PS00728 AP endonucleases family 1 signature 3.;Dbxref=GeneID:1175002;gbkey=misc_feature;gene=xthA
NC_003143.1	RefSeq	region	2438482	2438511	.	-	.	ID=id1488;Note=PS00726 AP endonucleases family 1 signature 1.;Dbxref=GeneID:1175002;gbkey=misc_feature;gene=xthA
NC_003143.1	RefSeq	gene	2439399	2440259	.	+	.	ID=gene2091;Name=YPO2169;Dbxref=GeneID:1175003;gbkey=Gene;locus_tag=YPO2169
NC_003143.1	RefSeq	CDS	2439399	2440259	.	+	0	ID=cds1997;Name=YP_002347144.1;Parent=gene2091;Dbxref=InterPro:IPR000847,InterPro:IPR011991,UniProtKB%2FTrEMBL:Q7CII0,Genbank:YP_002347144.1,GeneID:1175003;gbkey=CDS;product=LysR family transcriptional regulator;protein_id=YP_002347144.1;transl_table=11
NC_003143.1	RefSeq	region	2439450	2439542	.	+	.	ID=id1489;Note=PS00044 Bacterial regulatory proteins%2C lysR family signature.;Dbxref=GeneID:1175003;gbkey=misc_feature
NC_003143.1	RefSeq	gene	2440767	2440851	.	-	.	ID=gene2092;Name=YPt_29;Dbxref=GeneID:1175004;gbkey=Gene;locus_tag=YPt_29
NC_003143.1	RefSeq	tRNA	2440767	2440851	.	-	.	ID=rna42;Parent=gene2092;Note=tRNA Tyr anticodon GTA%2C Cove score 66.93;Dbxref=GeneID:1175004;gbkey=tRNA;product=tRNA-Tyr
NC_003143.1	RefSeq	exon	2440767	2440851	.	-	.	ID=id1490;Parent=rna42;Note=tRNA Tyr anticodon GTA%2C Cove score 66.93;Dbxref=GeneID:1175004;gbkey=tRNA;product=tRNA-Tyr
NC_003143.1	RefSeq	repeat_region	2441060	2442374	.	+	.	ID=id1491;Note=insertion sequence:IS285;gbkey=repeat_region
NC_003143.1	RefSeq	repeat_region	2441060	2441088	.	+	.	ID=id1492;Note=IS285 inverted repeat;gbkey=repeat_region
NC_003143.1	RefSeq	gene	2441131	2442339	.	+	.	ID=gene2093;Name=y1062;Dbxref=GeneID:1175006;gbkey=Gene;gene=y1062;gene_synonym=ypmt1.80C;locus_tag=YPO2170
NC_003143.1	RefSeq	CDS	2441131	2442339	.	+	0	ID=cds1998;Name=YP_002347145.1;Parent=gene2093;Dbxref=InterPro:IPR001207,UniProtKB%2FTrEMBL:Q7ARB0,Genbank:YP_002347145.1,GeneID:1175006;gbkey=CDS;gene=y1062;product=transposase for the IS285 insertion element;protein_id=YP_002347145.1;transl_table=11
NC_003143.1	RefSeq	region	2441824	2441898	.	+	.	ID=id1493;Note=PS01007 Transposases%2C Mutator family%2C signature.;Dbxref=GeneID:1175006;gbkey=misc_feature;gene=y1062
NC_003143.1	RefSeq	gene	2442302	2443171	.	-	.	ID=gene2094;Name=YPO2171;Dbxref=GeneID:1175005;gbkey=Gene;locus_tag=YPO2171
NC_003143.1	RefSeq	CDS	2442302	2443171	.	-	0	ID=cds1999;Name=YP_008479714.1;Parent=gene2094;Dbxref=Genbank:YP_008479714.1,GeneID:1175005;gbkey=CDS;product=formyltetrahydrofolate deformylase;protein_id=YP_008479714.1;transl_table=11
NC_003143.1	RefSeq	repeat_region	2442346	2442374	.	-	.	ID=id1494;Note=IS285 inverted repeat;Dbxref=GeneID:1175005;gbkey=repeat_region
NC_003143.1	RefSeq	gene	2443255	2443719	.	-	.	ID=gene2095;Name=YPO2172;Dbxref=GeneID:1175007;gbkey=Gene;locus_tag=YPO2172
NC_003143.1	RefSeq	CDS	2443255	2443719	.	-	0	ID=cds2000;Name=YP_002347146.1;Parent=gene2095;Dbxref=InterPro:IPR004027,UniProtKB%2FTrEMBL:Q0WEZ2,Genbank:YP_002347146.1,GeneID:1175007;gbkey=CDS;product=hypothetical protein;protein_id=YP_002347146.1;transl_table=11
NC_003143.1	RefSeq	ribosome_entry_site	2443725	2443728	.	-	.	ID=id1495;gbkey=RBS
NC_003143.1	RefSeq	gene	2445053	2446069	.	+	.	ID=gene2096;Name=YPO2173;Dbxref=GeneID:1175008;gbkey=Gene;locus_tag=YPO2173
NC_003143.1	RefSeq	CDS	2445053	2446069	.	+	0	ID=cds2001;Name=YP_002347147.1;Parent=gene2096;Dbxref=InterPro:IPR001789,InterPro:IPR011006,UniProtKB%2FTrEMBL:Q7CII2,Genbank:YP_002347147.1,GeneID:1175008;gbkey=CDS;product=response regulator of RpoS;protein_id=YP_002347147.1;transl_table=11
NC_003143.1	RefSeq	ribosome_entry_site	2446363	2446366	.	+	.	ID=id1496;gbkey=RBS
NC_003143.1	RefSeq	gene	2446376	2447722	.	+	.	ID=gene2097;Name=YPO2174;Dbxref=GeneID:1175009;gbkey=Gene;locus_tag=YPO2174
NC_003143.1	RefSeq	CDS	2446376	2447722	.	+	0	ID=cds2002;Name=YP_002347148.1;Parent=gene2097;Dbxref=InterPro:IPR001732,InterPro:IPR008927,UniProtKB%2FTrEMBL:Q0WEZ0,Genbank:YP_002347148.1,GeneID:1175009;gbkey=CDS;product=nucleotide sugar dehydrogenase;protein_id=YP_002347148.1;transl_table=11
NC_003143.1	RefSeq	gene	2448157	2448555	.	-	.	ID=gene2098;Name=hns;Dbxref=GeneID:1175010;gbkey=Gene;gene=hns;gene_synonym=cur,drdX,hns,hnsA,msyA,osmZ,pilG,topS;locus_tag=YPO2175
NC_003143.1	RefSeq	CDS	2448157	2448555	.	-	0	ID=cds2003;Name=YP_002347149.1;Parent=gene2098;Dbxref=InterPro:IPR001801,UniProtKB%2FTrEMBL:Q0WEY9,Genbank:YP_002347149.1,GeneID:1175010;gbkey=CDS;gene=hns;product=global DNA-binding transcriptional dual regulator H-NS;protein_id=YP_002347149.1;transl_table=11
NC_003143.1	RefSeq	region	2448178	2448201	.	-	.	ID=id1497;Note=PS00017 ATP%2FGTP-binding site motif A %28P-loop%29.;Dbxref=GeneID:1175010;gbkey=misc_feature;gene=hns
NC_003143.1	RefSeq	ribosome_entry_site	2449291	2449294	.	+	.	ID=id1498;gbkey=RBS
NC_003143.1	RefSeq	gene	2449305	2449895	.	+	.	ID=gene2099;Name=tdk;Dbxref=GeneID:1175011;gbkey=Gene;gene=tdk;locus_tag=YPO2176
NC_003143.1	RefSeq	CDS	2449305	2449895	.	+	0	ID=cds2004;Name=YP_002347150.1;Parent=gene2099;Note=catalyzes the formation of thymidine 5%27-phosphate from thymidine;Dbxref=InterPro:IPR001267,UniProtKB%2FTrEMBL:Q0WEY8,Genbank:YP_002347150.1,GeneID:1175011;gbkey=CDS;gene=tdk;product=thymidine kinase;protein_id=YP_002347150.1;transl_table=11
NC_003143.1	RefSeq	region	2449821	2449862	.	+	.	ID=id1499;Note=PS00603 Thymidine kinase cellular-type signature.;Dbxref=GeneID:1175011;gbkey=misc_feature;gene=tdk
NC_003143.1	RefSeq	repeat_region	2450198	2452151	.	-	.	ID=id1500;Note=insertion sequence:IS100;gbkey=repeat_region
NC_003143.1	RefSeq	repeat_region	2450198	2450225	.	+	.	ID=id1501;Note=IS100 inverted repeat;gbkey=repeat_region
NC_003143.1	RefSeq	gene	2450264	2451046	.	-	.	ID=gene2100;Name=YPO2177;Note=ypmt1.57c;Dbxref=GeneID:1175012;gbkey=Gene;locus_tag=YPO2177
NC_003143.1	RefSeq	CDS	2450264	2451046	.	-	0	ID=cds2005;Name=YP_002347151.1;Parent=gene2100;Dbxref=InterPro:IPR001270,InterPro:IPR002611,InterPro:IPR003593,UniProtKB%2FTrEMBL:Q7ARK4,Genbank:YP_002347151.1,GeneID:1175012;gbkey=CDS;product=transposase%2FIS protein;protein_id=YP_002347151.1;transl_table=11
NC_003143.1	RefSeq	region	2450696	2450719	.	-	.	ID=id1502;Note=PS00017 ATP%2FGTP-binding site motif A %28P-loop%29.;Dbxref=GeneID:1175012;gbkey=misc_feature
NC_003143.1	RefSeq	gene	2451043	2452065	.	-	.	ID=gene2101;Name=y1093;Dbxref=GeneID:1175013;gbkey=Gene;gene=y1093;gene_synonym=ypmt1;locus_tag=YPO2178
NC_003143.1	RefSeq	CDS	2451043	2452065	.	-	0	ID=cds2006;Name=YP_002347152.1;Parent=gene2101;Dbxref=InterPro:IPR001584,InterPro:IPR006120,InterPro:IPR009057,InterPro:IPR012287,InterPro:IPR012337,UniProtKB%2FTrEMBL:Q7ARN5,Genbank:YP_002347152.1,GeneID:1175013;gbkey=CDS;gene=y1093;product=transposase for insertion sequence IS100;protein_id=YP_002347152.1;transl_table=11
NC_003143.1	RefSeq	region	2451949	2452014	.	-	.	ID=id1503;Note=Predicted helix-turn-helix motif with score 2147 %28%2B6.50 SD%29 at aa 18-39%2C sequence MSSRAIARELGISRNTVKRYLQ;Dbxref=GeneID:1175013;gbkey=misc_feature;gene=y1093
NC_003143.1	RefSeq	repeat_region	2452124	2452151	.	-	.	ID=id1504;Note=IS100 inverted repeat;gbkey=repeat_region
NC_003143.1	RefSeq	gene	2452605	2455280	.	-	.	ID=gene2102;Name=adhE;Dbxref=GeneID:1175014;gbkey=Gene;gene=adhE;gene_synonym=ana;locus_tag=YPO2180
NC_003143.1	RefSeq	CDS	2452605	2455280	.	-	0	ID=cds2007;Name=YP_002347153.1;Parent=gene2102;Dbxref=InterPro:IPR001670,InterPro:IPR002086,InterPro:IPR012079,UniProtKB%2FTrEMBL:Q74TY8,Genbank:YP_002347153.1,GeneID:1175014;gbkey=CDS;gene=adhE;product=bifunctional acetaldehyde-CoA%2Falcohol dehydrogenase;protein_id=YP_002347153.1;transl_table=11
NC_003143.1	RefSeq	region	2452899	2452964	.	-	.	ID=id1505;Note=Predicted helix-turn-helix motif with score 1036 %28%2B2.72 SD%29 at aa 773-794%2C sequence RRYAEIADHLGLSAPGDRTAQK;Dbxref=GeneID:1175014;gbkey=misc_feature;gene=adhE
NC_003143.1	RefSeq	region	2453061	2453123	.	-	.	ID=id1506;Note=PS00060 Iron-containing alcohol dehydrogenases signature 2.;Dbxref=GeneID:1175014;gbkey=misc_feature;gene=adhE
NC_003143.1	RefSeq	region	2453301	2453387	.	-	.	ID=id1507;Note=PS00913 Iron-containing alcohol dehydrogenases signature 1.;Dbxref=GeneID:1175014;gbkey=misc_feature;gene=adhE
NC_003143.1	RefSeq	ribosome_entry_site	2455287	2455292	.	-	.	ID=id1508;gbkey=RBS
NC_003143.1	RefSeq	ribosome_entry_site	2456077	2456080	.	+	.	ID=id1509;gbkey=RBS
NC_003143.1	RefSeq	gene	2456087	2456731	.	+	.	ID=gene2103;Name=YPO2181;Dbxref=GeneID:1175015;gbkey=Gene;locus_tag=YPO2181
NC_003143.1	RefSeq	CDS	2456087	2456731	.	+	0	ID=cds2008;Name=YP_002347154.1;Parent=gene2103;Dbxref=InterPro:IPR002771,UniProtKB%2FTrEMBL:Q7CIN5,Genbank:YP_002347154.1,GeneID:1175015;gbkey=CDS;product=hypothetical protein;protein_id=YP_002347154.1;transl_table=11
NC_003143.1	RefSeq	ribosome_entry_site	2457554	2457557	.	+	.	ID=id1510;gbkey=RBS
NC_003143.1	RefSeq	gene	2457569	2459206	.	+	.	ID=gene2104;Name=oppA;Dbxref=GeneID:1175016;gbkey=Gene;gene=oppA;locus_tag=YPO2182
NC_003143.1	RefSeq	CDS	2457569	2459206	.	+	0	ID=cds2009;Name=YP_002347155.1;Parent=gene2104;Dbxref=InterPro:IPR000914,UniProtKB%2FTrEMBL:Q7CIN4,Genbank:YP_002347155.1,GeneID:1175016;gbkey=CDS;gene=oppA;product=periplasmic oligopeptide-binding protein;protein_id=YP_002347155.1;transl_table=11
NC_003143.1	RefSeq	region	2457830	2457898	.	+	.	ID=id1511;Note=PS01040 Bacterial extracellular solute-binding proteins%2C family 5 signature.;Dbxref=GeneID:1175016;gbkey=misc_feature;gene=oppA
NC_003143.1	RefSeq	gene	2459293	2460213	.	+	.	ID=gene2105;Name=oppB;Dbxref=GeneID:1175017;gbkey=Gene;gene=oppB;locus_tag=YPO2183
NC_003143.1	RefSeq	CDS	2459293	2460213	.	+	0	ID=cds2010;Name=YP_002347156.1;Parent=gene2105;Dbxref=InterPro:IPR000515,UniProtKB%2FTrEMBL:Q7CIN3,Genbank:YP_002347156.1,GeneID:1175017;gbkey=CDS;gene=oppB;product=oligopeptide transporter permease;protein_id=YP_002347156.1;transl_table=11
NC_003143.1	RefSeq	region	2459884	2459970	.	+	.	ID=id1512;Note=PS00402 Binding-protein-dependent transport systems inner membrane comp. sign.;Dbxref=GeneID:1175017;gbkey=misc_feature;gene=oppB
NC_003143.1	RefSeq	ribosome_entry_site	2460218	2460221	.	+	.	ID=id1513;gbkey=RBS
NC_003143.1	RefSeq	gene	2460232	2461137	.	+	.	ID=gene2106;Name=oppC;Dbxref=GeneID:1175018;gbkey=Gene;gene=oppC;locus_tag=YPO2184
NC_003143.1	RefSeq	CDS	2460232	2461137	.	+	0	ID=cds2011;Name=YP_002347157.1;Parent=gene2106;Dbxref=InterPro:IPR000515,UniProtKB%2FTrEMBL:Q7CIN2,Genbank:YP_002347157.1,GeneID:1175018;gbkey=CDS;gene=oppC;product=oligopeptide transport system permease;protein_id=YP_002347157.1;transl_table=11
NC_003143.1	RefSeq	region	2460790	2460876	.	+	.	ID=id1514;Note=PS00402 Binding-protein-dependent transport systems inner membrane comp. sign.;Dbxref=GeneID:1175018;gbkey=misc_feature;gene=oppC
NC_003143.1	RefSeq	ribosome_entry_site	2461137	2461141	.	+	.	ID=id1515;gbkey=RBS;gene=oppC
NC_003143.1	RefSeq	gene	2461149	2462150	.	+	.	ID=gene2107;Name=oppD;Dbxref=GeneID:1175019;gbkey=Gene;gene=oppD;locus_tag=YPO2185
NC_003143.1	RefSeq	CDS	2461149	2462150	.	+	0	ID=cds2012;Name=YP_002347158.1;Parent=gene2107;Dbxref=InterPro:IPR003439,InterPro:IPR003593,InterPro:IPR010066,InterPro:IPR013563,UniProtKB%2FTrEMBL:Q7CIN1,Genbank:YP_002347158.1,GeneID:1175019;gbkey=CDS;gene=oppD;product=oligopeptide transporter ATP-binding component;protein_id=YP_002347158.1;transl_table=11
NC_003143.1	RefSeq	region	2461302	2461325	.	+	.	ID=id1516;Note=PS00017 ATP%2FGTP-binding site motif A %28P-loop%29.;Dbxref=GeneID:1175019;gbkey=misc_feature;gene=oppD
NC_003143.1	RefSeq	region	2461641	2461685	.	+	.	ID=id1517;Note=PS00211 ABC transporters family signature.;Dbxref=GeneID:1175019;gbkey=misc_feature;gene=oppD
NC_003143.1	RefSeq	gene	2462147	2463148	.	+	.	ID=gene2108;Name=oppF;Dbxref=GeneID:1175020;gbkey=Gene;gene=oppF;locus_tag=YPO2186
NC_003143.1	RefSeq	CDS	2462147	2463148	.	+	0	ID=cds2013;Name=YP_002347159.1;Parent=gene2108;Dbxref=InterPro:IPR003439,InterPro:IPR003593,InterPro:IPR010066,InterPro:IPR013563,UniProtKB%2FTrEMBL:Q7CIN0,Genbank:YP_002347159.1,GeneID:1175020;gbkey=CDS;gene=oppF;product=oligopeptide transport ATP-binding protein;protein_id=YP_002347159.1;transl_table=11
NC_003143.1	RefSeq	region	2462312	2462335	.	+	.	ID=id1518;Note=PS00017 ATP%2FGTP-binding site motif A %28P-loop%29.;Dbxref=GeneID:1175020;gbkey=misc_feature;gene=oppF
NC_003143.1	RefSeq	region	2462636	2462680	.	+	.	ID=id1519;Note=PS00211 ABC transporters family signature.;Dbxref=GeneID:1175020;gbkey=misc_feature;gene=oppF
NC_003143.1	RefSeq	gene	2463709	2463924	.	+	.	ID=gene2109;Name=YPO2186a;Dbxref=GeneID:16744764;gbkey=Gene;locus_tag=YPO2186a
NC_003143.1	RefSeq	CDS	2463709	2463924	.	+	0	ID=cds2014;Name=YP_008479715.1;Parent=gene2109;Dbxref=Genbank:YP_008479715.1,GeneID:16744764;gbkey=CDS;product=hypothetical protein;protein_id=YP_008479715.1;transl_table=11
NC_003143.1	RefSeq	gene	2464223	2464546	.	-	.	ID=gene2110;Name=YPO2187;Dbxref=GeneID:1175021;gbkey=Gene;locus_tag=YPO2187
NC_003143.1	RefSeq	CDS	2464223	2464546	.	-	0	ID=cds2015;Name=YP_002347160.1;Parent=gene2110;Note=highly acidic protein%3B the structure of the Haemophilus influenzae protein shows similarity to uracil DNA glycosylase inhibitor %28Ugi%29%3B binds heat-unstable protein %28HU-alpha%29 which is a histone-like protein;Dbxref=InterPro:IPR007376,UniProtKB%2FTrEMBL:Q0WEX8,Genbank:YP_002347160.1,GeneID:1175021;gbkey=CDS;product=dsDNA-mimic protein;protein_id=YP_002347160.1;transl_table=11
NC_003143.1	RefSeq	gene	2464711	2466171	.	-	.	ID=gene2111;Name=cls;Dbxref=GeneID:1175022;gbkey=Gene;gene=cls;gene_synonym=nov;locus_tag=YPO2188
NC_003143.1	RefSeq	CDS	2464711	2466171	.	-	0	ID=cds2016;Name=YP_002347161.1;Parent=gene2111;Note=catalyzes the transfer of a phosphatidyl group to phosphodidylglycerol to form cardiolipin %28diphosphatidylglycerol%29;Dbxref=InterPro:IPR001736,UniProtKB%2FTrEMBL:Q0WEX7,Genbank:YP_002347161.1,GeneID:1175022;gbkey=CDS;gene=cls;product=cardiolipin synthetase;protein_id=YP_002347161.1;transl_table=11
NC_003143.1	RefSeq	gene	2466240	2466488	.	-	.	ID=gene2112;Name=YPO2189;Dbxref=GeneID:1175023;gbkey=Gene;locus_tag=YPO2189
NC_003143.1	RefSeq	CDS	2466240	2466488	.	-	0	ID=cds2017;Name=YP_002347162.1;Parent=gene2112;Note=No significant database matches. Similar to CDS YPO2920 %288s aa%29 E%28%29: 2.5e-23%2C 95.1%25 identity in 61 aa overlap;Dbxref=UniProtKB%2FTrEMBL:Q74TX9,Genbank:YP_002347162.1,GeneID:1175023;gbkey=CDS;product=hypothetical protein;protein_id=YP_002347162.1;transl_table=11
NC_003143.1	RefSeq	gene	2467211	2467750	.	+	.	ID=gene2113;Name=ail;Dbxref=GeneID:1175024;gbkey=Gene;gene=ail;locus_tag=YPO2190
NC_003143.1	RefSeq	CDS	2467211	2467750	.	+	0	ID=cds2018;Name=YP_002347163.1;Parent=gene2113;Dbxref=InterPro:IPR000758,UniProtKB%2FTrEMBL:Q7CIM9,Genbank:YP_002347163.1,GeneID:1175024;gbkey=CDS;gene=ail;product=attachment invasion locus protein;protein_id=YP_002347163.1;transl_table=11
NC_003143.1	RefSeq	region	2467721	2467747	.	+	.	ID=id1520;Note=PS00695 Enterobacterial virulence outer membrane protein signature 2.;Dbxref=GeneID:1175024;gbkey=misc_feature;gene=ail
NC_003143.1	RefSeq	gene	2467971	2468234	.	+	.	ID=gene2114;Name=YPO2191;Dbxref=GeneID:1175025;gbkey=Gene;locus_tag=YPO2191
NC_003143.1	RefSeq	CDS	2467971	2468234	.	+	0	ID=cds2019;Name=YP_002347164.1;Parent=gene2114;Note=No significant database hits;Dbxref=UniProtKB%2FTrEMBL:Q74TX7,Genbank:YP_002347164.1,GeneID:1175025;gbkey=CDS;product=hypothetical protein;protein_id=YP_002347164.1;transl_table=11
NC_003143.1	RefSeq	gene	2468818	2469114	.	-	.	ID=gene2115;Name=YPO2192;Dbxref=GeneID:1175026;gbkey=Gene;locus_tag=YPO2192
NC_003143.1	RefSeq	CDS	2468818	2469114	.	-	0	ID=cds2020;Name=YP_002347165.1;Parent=gene2115;Note=unknown function%3B YciI from Haemophilus influenzae presents crystal structure similarity to a muconolactone isomerase%2C but does not seem to catalyze any of the predicted reactions based on sequence and structure similarity;Dbxref=InterPro:IPR005545,UniProtKB%2FTrEMBL:Q7CIM8,Genbank:YP_002347165.1,GeneID:1175026;gbkey=CDS;product=hypothetical protein;protein_id=YP_002347165.1;transl_table=11
NC_003143.1	RefSeq	gene	2469415	2470173	.	+	.	ID=gene2116;Name=tonB;Dbxref=GeneID:1175027;gbkey=Gene;gene=tonB;locus_tag=YPO2193
NC_003143.1	RefSeq	CDS	2469415	2470173	.	+	0	ID=cds2021;Name=YP_002347166.1;Parent=gene2116;Note=membrane spanning protein in TonB-ExbB-ExbD complex%3B transduces proton motive force of the cytoplasmic membrane to outer membrane transporters%3B involved in the transport of ron-siderophore complexes%2C vitamin B12 and colicins;Dbxref=InterPro:IPR003538,InterPro:IPR006260,UniProtKB%2FTrEMBL:Q7CIM7,Genbank:YP_002347166.1,GeneID:1175027;gbkey=CDS;gene=tonB;product=transport protein TonB;protein_id=YP_002347166.1;transl_table=11
NC_003143.1	RefSeq	repeat_region	2470174	2471488	.	-	.	ID=id1521;Note=insertion sequence:IS285;gbkey=repeat_region
NC_003143.1	RefSeq	repeat_region	2470174	2470202	.	+	.	ID=id1522;Note=IS285 inverted repeat;gbkey=repeat_region
NC_003143.1	RefSeq	gene	2470209	2471417	.	-	.	ID=gene2117;Name=y1062;Dbxref=GeneID:1175028;gbkey=Gene;gene=y1062;gene_synonym=ypmt1.80C;locus_tag=YPO2194
NC_003143.1	RefSeq	CDS	2470209	2471417	.	-	0	ID=cds2022;Name=YP_002347167.1;Parent=gene2117;Dbxref=InterPro:IPR001207,UniProtKB%2FTrEMBL:Q7ARB0,Genbank:YP_002347167.1,GeneID:1175028;gbkey=CDS;gene=y1062;product=transposase for the IS285 insertion element;protein_id=YP_002347167.1;transl_table=11
NC_003143.1	RefSeq	region	2470650	2470724	.	-	.	ID=id1523;Note=PS01007 Transposases%2C Mutator family%2C signature.;Dbxref=GeneID:1175028;gbkey=misc_feature;gene=y1062
NC_003143.1	RefSeq	repeat_region	2471460	2471488	.	-	.	ID=id1524;Note=IS285 inverted repeat;gbkey=repeat_region
NC_003143.1	RefSeq	gene	2471565	2472014	.	-	.	ID=gene2118;Name=YPO2195;Dbxref=GeneID:1175029;gbkey=Gene;locus_tag=YPO2195
NC_003143.1	RefSeq	CDS	2471565	2472014	.	-	0	ID=cds2023;Name=YP_002347168.1;Parent=gene2118;Note=YciA%3B hydrolase that catalyzes the hydrolysis of the thioester bond in palmitoyl-CoA and malonyl-CoA%3B member of the the acyl coenzyme A hydrolase family of proteins;Dbxref=InterPro:IPR006683,UniProtKB%2FTrEMBL:Q7CIM6,Genbank:YP_002347168.1,GeneID:1175029;gbkey=CDS;product=acyl-CoA thioester hydrolase;protein_id=YP_002347168.1;transl_table=11
NC_003143.1	RefSeq	gene	2472094	2472636	.	-	.	ID=gene2119;Name=ispZ;Dbxref=GeneID:1175030;gbkey=Gene;gene=ispZ;locus_tag=YPO2196
NC_003143.1	RefSeq	CDS	2472094	2472636	.	-	0	ID=cds2024;Name=YP_002347169.1;Parent=gene2119;Note=Involved in cell division%3B probably involved in intracellular septation;Dbxref=InterPro:IPR006008,UniProtKB%2FTrEMBL:Q0WEW9,Genbank:YP_002347169.1,GeneID:1175030;gbkey=CDS;gene=ispZ;product=intracellular septation protein A;protein_id=YP_002347169.1;transl_table=11
NC_003143.1	RefSeq	gene	2472867	2474601	.	+	.	ID=gene2120;Name=YPO2197;Dbxref=GeneID:1175031;gbkey=Gene;locus_tag=YPO2197;pseudo=true
NC_003143.1	RefSeq	gene	2474722	2475492	.	-	.	ID=gene2121;Name=YPO2199;Dbxref=GeneID:1175032;gbkey=Gene;locus_tag=YPO2199
NC_003143.1	RefSeq	CDS	2474722	2475492	.	-	0	ID=cds2025;Name=YP_002347170.1;Parent=gene2121;Dbxref=InterPro:IPR009627,Genbank:YP_002347170.1,GeneID:1175032;gbkey=CDS;product=hypothetical protein;protein_id=YP_002347170.1;transl_table=11
NC_003143.1	RefSeq	ribosome_entry_site	2475498	2475503	.	-	.	ID=id1525;gbkey=RBS
NC_003143.1	RefSeq	gene	2475654	2475869	.	+	.	ID=gene2122;Name=YPO2200;Dbxref=GeneID:1175033;gbkey=Gene;locus_tag=YPO2200
NC_003143.1	RefSeq	CDS	2475654	2475869	.	+	0	ID=cds2026;Name=YP_002347171.1;Parent=gene2122;Note=No significant database hits;Dbxref=UniProtKB%2FTrEMBL:Q7CIM5,Genbank:YP_002347171.1,GeneID:1175033;gbkey=CDS;product=hypothetical protein;protein_id=YP_002347171.1;transl_table=11
NC_003143.1	RefSeq	gene	2475978	2476613	.	+	.	ID=gene2123;Name=ompW;Dbxref=GeneID:1175034;gbkey=Gene;gene=ompW;locus_tag=YPO2201
NC_003143.1	RefSeq	CDS	2475978	2476613	.	+	0	ID=cds2027;Name=YP_002347172.1;Parent=gene2123;Note=receptor for colicin S4;Dbxref=InterPro:IPR000758,InterPro:IPR005618,UniProtKB%2FTrEMBL:Q0WEW6,Genbank:YP_002347172.1,GeneID:1175034;gbkey=CDS;gene=ompW;product=outer membrane protein W;protein_id=YP_002347172.1;transl_table=11
NC_003143.1	RefSeq	region	2476584	2476610	.	+	.	ID=id1526;Note=PS00695 Enterobacterial virulence outer membrane protein signature 2.;Dbxref=GeneID:1175034;gbkey=misc_feature;gene=ompW
NC_003143.1	RefSeq	gene	2476760	2477074	.	-	.	ID=gene2124;Name=YPO2202;Dbxref=GeneID:1175035;gbkey=Gene;locus_tag=YPO2202
NC_003143.1	RefSeq	CDS	2476760	2477074	.	-	0	ID=cds2028;Name=YP_002347173.1;Parent=gene2124;Dbxref=InterPro:IPR007055,InterPro:IPR014004,UniProtKB%2FTrEMBL:Q7CIM4,Genbank:YP_002347173.1,GeneID:1175035;gbkey=CDS;product=lipoprotein;protein_id=YP_002347173.1;transl_table=11
NC_003143.1	RefSeq	region	2477006	2477038	.	-	.	ID=id1527;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site.;Dbxref=GeneID:1175035;gbkey=misc_feature
NC_003143.1	RefSeq	ribosome_entry_site	2477083	2477086	.	-	.	ID=id1528;gbkey=RBS
NC_003143.1	RefSeq	gene	2477417	2478223	.	-	.	ID=gene2125;Name=trpA;Dbxref=GeneID:1175036;gbkey=Gene;gene=trpA;locus_tag=YPO2203
NC_003143.1	RefSeq	CDS	2477417	2478223	.	-	0	ID=cds2029;Name=YP_002347174.1;Parent=gene2125;Note=catalyzes the formation of indole and glyceraldehyde 3-phosphate from indoleglycerol phosphate in tryptophan biosynthesis;Dbxref=InterPro:IPR002028,InterPro:IPR011060,UniProtKB%2FTrEMBL:Q0WEW4,Genbank:YP_002347174.1,GeneID:1175036;gbkey=CDS;gene=trpA;product=tryptophan synthase subunit alpha;protein_id=YP_002347174.1;transl_table=11
NC_003143.1	RefSeq	region	2478041	2478082	.	-	.	ID=id1529;Note=PS00167 Tryptophan synthase alpha chain signature.;Dbxref=GeneID:1175036;gbkey=misc_feature;gene=trpA
NC_003143.1	RefSeq	gene	2478223	2479413	.	-	.	ID=gene2126;Name=trpB;Dbxref=GeneID:1175037;gbkey=Gene;gene=trpB;locus_tag=YPO2204
NC_003143.1	RefSeq	CDS	2478223	2479413	.	-	0	ID=cds2030;Name=YP_002347175.1;Parent=gene2126;Note=catalyzes the formation of L-tryptophan from L-serine and 1-%28indol-3-yl%29glycerol 3-phosphate;Dbxref=InterPro:IPR001926,InterPro:IPR006653,InterPro:IPR006654,UniProtKB%2FTrEMBL:Q0WEW3,Genbank:YP_002347175.1,GeneID:1175037;gbkey=CDS;gene=trpB;product=tryptophan synthase subunit beta;protein_id=YP_002347175.1;transl_table=11
NC_003143.1	RefSeq	ribosome_entry_site	2478231	2478234	.	-	.	ID=id1530;Dbxref=GeneID:1175037;gbkey=RBS;gene=trpB
NC_003143.1	RefSeq	region	2479150	2479179	.	-	.	ID=id1531;Note=PS00168 Tryptophan synthase beta chain pyridoxal-phosphate attachment site.;Dbxref=GeneID:1175037;gbkey=misc_feature;gene=trpB
NC_003143.1	RefSeq	gene	2479570	2480997	.	-	.	ID=gene2127;Name=trpC;Dbxref=GeneID:1175038;gbkey=Gene;gene=trpC;locus_tag=YPO2205
NC_003143.1	RefSeq	CDS	2479570	2480997	.	-	0	ID=cds2031;Name=YP_002347176.1;Parent=gene2127;Note=monomeric bifunctional protein%3B functions in tryptophan biosynthesis pathway%3B phosphoribosylanthranilate is rearranged to carboxyphenylaminodeoxyribulosephosphate which is then closed to form indole-3-glycerol phosphate;Dbxref=InterPro:IPR001240,InterPro:IPR001468,InterPro:IPR011060,InterPro:IPR013798,UniProtKB%2FTrEMBL:Q0WEW2,Genbank:YP_002347176.1,GeneID:1175038;gbkey=CDS;gene=trpC;product=bifunctional indole-3-glycerol phosphate synthase%2Fphosphoribosylanthranilate isomerase;protein_id=YP_002347176.1;transl_table=11
NC_003143.1	RefSeq	region	2480737	2480781	.	-	.	ID=id1532;Note=PS00614 Indole-3-glycerol phosphate synthase signature.;Dbxref=GeneID:1175038;gbkey=misc_feature;gene=trpC
NC_003143.1	RefSeq	gene	2481001	2481999	.	-	.	ID=gene2128;Name=trpD;Dbxref=GeneID:1175039;gbkey=Gene;gene=trpD;locus_tag=YPO2206
NC_003143.1	RefSeq	CDS	2481001	2481999	.	-	0	ID=cds2032;Name=YP_002347177.1;Parent=gene2128;Note=Catalyzes the conversion of N-%285-phospho-D-ribosyl%29-anthranilate and diphosphate to anthranilate and 5-phospho-alpha-D-ribose 1-diphosphate;Dbxref=InterPro:IPR000312,InterPro:IPR005940,UniProtKB%2FTrEMBL:Q0WEW1,Genbank:YP_002347177.1,GeneID:1175039;gbkey=CDS;gene=trpD;product=anthranilate phosphoribosyltransferase;protein_id=YP_002347177.1;transl_table=11
NC_003143.1	RefSeq	ribosome_entry_site	2481005	2481008	.	-	.	ID=id1533;Dbxref=GeneID:1175039;gbkey=RBS;gene=trpD
NC_003143.1	RefSeq	ribosome_entry_site	2482006	2482011	.	-	.	ID=id1534;gbkey=RBS
NC_003143.1	RefSeq	gene	2482014	2482592	.	-	.	ID=gene2129;Name=trpG;Dbxref=GeneID:1175040;gbkey=Gene;gene=trpG;locus_tag=YPO2207
NC_003143.1	RefSeq	CDS	2482014	2482592	.	-	0	ID=cds2033;Name=YP_002347178.1;Parent=gene2129;Note=TrpG%3B with TrpE catalyzes the formation of anthranilate and glutamate from chorismate and glutamine%3B TrpG provides the glutamine amidotransferase activity;Dbxref=InterPro:IPR000991,InterPro:IPR001317,InterPro:IPR006220,InterPro:IPR006221,InterPro:IPR011702,InterPro:IPR012998,UniProtKB%2FTrEMBL:Q0WEW0,Genbank:YP_002347178.1,GeneID:1175040;gbkey=CDS;gene=trpG;product=anthranilate synthase component II;protein_id=YP_002347178.1;transl_table=11
NC_003143.1	RefSeq	region	2482323	2482358	.	-	.	ID=id1535;Note=PS00442 Glutamine amidotransferases class-I active site.;Dbxref=GeneID:1175040;gbkey=misc_feature;gene=trpG
NC_003143.1	RefSeq	gene	2482592	2484157	.	-	.	ID=gene2130;Name=trpE;Dbxref=GeneID:1175041;gbkey=Gene;gene=trpE;locus_tag=YPO2208
NC_003143.1	RefSeq	CDS	2482592	2484157	.	-	0	ID=cds2034;Name=YP_002347179.1;Parent=gene2130;Note=with component II%2C the glutamine amidotransferase%2C catalyzes the formation of anthranilate from chorismate and glutamine;Dbxref=InterPro:IPR005257,InterPro:IPR005801,InterPro:IPR006805,UniProtKB%2FTrEMBL:Q7CIM3,Genbank:YP_002347179.1,GeneID:1175041;gbkey=CDS;gene=trpE;product=anthranilate synthase component I;protein_id=YP_002347179.1;transl_table=11
NC_003143.1	RefSeq	ribosome_entry_site	2482601	2482606	.	-	.	ID=id1536;Dbxref=GeneID:1175041;gbkey=RBS;gene=trpE
NC_003143.1	RefSeq	gene	2484273	2484335	.	-	.	ID=gene2131;Name=YPO2209;Dbxref=GeneID:1175042;gbkey=Gene;locus_tag=YPO2209
NC_003143.1	RefSeq	CDS	2484273	2484335	.	-	0	ID=cds2035;Name=YP_002347180.1;Parent=gene2131;Note=trp operon leader peptide;Dbxref=InterPro:IPR013205,UniProtKB%2FTrEMBL:Q74TW7,Genbank:YP_002347180.1,GeneID:1175042;gbkey=CDS;product=trp operon leader peptide;protein_id=YP_002347180.1;transl_table=11
NC_003143.1	RefSeq	gene	2484364	2484492	.	-	.	ID=gene2132;Name=YPO2210;Dbxref=GeneID:1175043;gbkey=Gene;locus_tag=YPO2210
NC_003143.1	RefSeq	CDS	2484364	2484492	.	-	0	ID=cds2036;Name=YP_002347181.1;Parent=gene2132;Note=No significant database hits;Dbxref=UniProtKB%2FTrEMBL:Q0WEV7,Genbank:YP_002347181.1,GeneID:1175043;gbkey=CDS;product=hypothetical protein;protein_id=YP_002347181.1;transl_table=11
NC_003143.1	RefSeq	gene	2484609	2485508	.	+	.	ID=gene2133;Name=trpH;Dbxref=GeneID:1175044;gbkey=Gene;gene=trpH;locus_tag=YPO2211
NC_003143.1	RefSeq	CDS	2484609	2485508	.	+	0	ID=cds2037;Name=YP_002347182.1;Parent=gene2133;Dbxref=InterPro:IPR003141,InterPro:IPR004013,UniProtKB%2FTrEMBL:Q74TW6,Genbank:YP_002347182.1,GeneID:1175044;gbkey=CDS;gene=trpH;product=hypothetical protein;protein_id=YP_002347182.1;transl_table=11
NC_003143.1	RefSeq	ribosome_entry_site	2485514	2485518	.	+	.	ID=id1537;gbkey=RBS
NC_003143.1	RefSeq	gene	2485525	2486145	.	+	.	ID=gene2134;Name=YPO2212;Dbxref=GeneID:1175045;gbkey=Gene;locus_tag=YPO2212
NC_003143.1	RefSeq	CDS	2485525	2486145	.	+	0	ID=cds2038;Name=YP_002347183.1;Parent=gene2134;Dbxref=InterPro:IPR004388,InterPro:IPR006070,InterPro:IPR012200,UniProtKB%2FTrEMBL:Q7CIM2,Genbank:YP_002347183.1,GeneID:1175045;gbkey=CDS;product=hypothetical protein;protein_id=YP_002347183.1;transl_table=11
NC_003143.1	RefSeq	region	2485609	2485647	.	+	.	ID=id1538;Note=PS01147 SUA5%2FyciO%2FyrdC family signature.;Dbxref=GeneID:1175045;gbkey=misc_feature
NC_003143.1	RefSeq	ribosome_entry_site	2486481	2486485	.	+	.	ID=id1539;gbkey=RBS
NC_003143.1	RefSeq	gene	2486492	2487526	.	+	.	ID=gene2135;Name=YPO2213;Dbxref=GeneID:1175046;gbkey=Gene;locus_tag=YPO2213
NC_003143.1	RefSeq	CDS	2486492	2487526	.	+	0	ID=cds2039;Name=YP_002347184.1;Parent=gene2135;Note=catalyzes the synthesis of pseudouridine from uracil-2605 in 23S ribosomal RNA;Dbxref=InterPro:IPR000748,InterPro:IPR002942,InterPro:IPR006145,UniProtKB%2FTrEMBL:Q0WEV4,Genbank:YP_002347184.1,GeneID:1175046;gbkey=CDS;product=23S rRNA pseudouridylate synthase B;protein_id=YP_002347184.1;transl_table=11
NC_003143.1	RefSeq	region	2486888	2486932	.	+	.	ID=id1540;Note=PS01149 Rsu family of pseudouridine synthase signature.;Dbxref=GeneID:1175046;gbkey=misc_feature
NC_003143.1	RefSeq	gene	2487649	2488239	.	-	.	ID=gene2136;Name=btuR;Dbxref=GeneID:1175047;gbkey=Gene;gene=btuR;gene_synonym=cobA;locus_tag=YPO2214
NC_003143.1	RefSeq	CDS	2487649	2488239	.	-	0	ID=cds2040;Name=YP_002347185.1;Parent=gene2136;Note=catalyzes the formation of adenosylcob%28III%29yrinic acid a%2Cc-diamide from cob%28I%29yrinic acid a%2Cc-diamide;Dbxref=InterPro:IPR003724,UniProtKB%2FTrEMBL:Q7CIM1,Genbank:YP_002347185.1,GeneID:1175047;gbkey=CDS;gene=btuR;product=cob%28I%29yrinic acid a%2Cc-diamide adenosyltransferase;protein_id=YP_002347185.1;transl_table=11
NC_003143.1	RefSeq	ribosome_entry_site	2488251	2488256	.	-	.	ID=id1541;gbkey=RBS
NC_003143.1	RefSeq	gene	2488256	2489017	.	-	.	ID=gene2137;Name=YPO2215;Dbxref=GeneID:1175048;gbkey=Gene;locus_tag=YPO2215
NC_003143.1	RefSeq	CDS	2488256	2489017	.	-	0	ID=cds2041;Name=YP_002347186.1;Parent=gene2137;Dbxref=InterPro:IPR002198,InterPro:IPR002347,UniProtKB%2FTrEMBL:Q0WEV2,Genbank:YP_002347186.1,GeneID:1175048;gbkey=CDS;product=short chain dehydrogenase;protein_id=YP_002347186.1;transl_table=11
NC_003143.1	RefSeq	region	2488478	2488564	.	-	.	ID=id1542;Note=PS00061 Short-chain dehydrogenases%2Freductases family signature.;Dbxref=GeneID:1175048;gbkey=misc_feature
NC_003143.1	RefSeq	ribosome_entry_site	2489025	2489028	.	-	.	ID=id1543;gbkey=RBS
NC_003143.1	RefSeq	gene	2489189	2490235	.	+	.	ID=gene2138;Name=sohB;Dbxref=GeneID:1175049;gbkey=Gene;gene=sohB;locus_tag=YPO2216
NC_003143.1	RefSeq	CDS	2489189	2490235	.	+	0	ID=cds2042;Name=YP_002347187.1;Parent=gene2138;Note=SohB%3B periplasmic protein%3B member of the peptidase S49 family;Dbxref=InterPro:IPR002142,InterPro:IPR013703,UniProtKB%2FTrEMBL:Q7CIM0,Genbank:YP_002347187.1,GeneID:1175049;gbkey=CDS;gene=sohB;product=periplasmic protease;protein_id=YP_002347187.1;transl_table=11
NC_003143.1	RefSeq	region	2489207	2489275	.	+	.	ID=id1544;Note=1 probable transmembrane helix predicted;Dbxref=GeneID:1175049;gbkey=misc_feature;gene=sohB
NC_003143.1	RefSeq	gene	2490354	2490605	.	-	.	ID=gene2139;Name=YPO2217;Dbxref=GeneID:1175050;gbkey=Gene;locus_tag=YPO2217
NC_003143.1	RefSeq	CDS	2490354	2490605	.	-	0	ID=cds2043;Name=YP_002347188.1;Parent=gene2139;Dbxref=UniProtKB%2FTrEMBL:Q7CIL9,Genbank:YP_002347188.1,GeneID:1175050;gbkey=CDS;product=hypothetical protein;protein_id=YP_002347188.1;transl_table=11
NC_003143.1	RefSeq	ribosome_entry_site	2490613	2490616	.	-	.	ID=id1545;gbkey=RBS
NC_003143.1	RefSeq	gene	2490623	2490997	.	+	.	ID=gene2140;Name=YPO2217a;Dbxref=GeneID:1175051;gbkey=Gene;locus_tag=YPO2217a
NC_003143.1	RefSeq	CDS	2490623	2490997	.	+	0	ID=cds2044;Name=YP_002347189.1;Parent=gene2140;Note=Doubtful CDS. No significant database hits;Dbxref=UniProtKB%2FTrEMBL:Q0WEU9,Genbank:YP_002347189.1,GeneID:1175051;gbkey=CDS;product=hypothetical protein;protein_id=YP_002347189.1;transl_table=11
NC_003143.1	RefSeq	gene	2491024	2493639	.	+	.	ID=gene2141;Name=topA;Dbxref=GeneID:1175052;gbkey=Gene;gene=topA;locus_tag=YPO2218
NC_003143.1	RefSeq	CDS	2491024	2493639	.	+	0	ID=cds2045;Name=YP_002347190.1;Parent=gene2141;Note=catalyzes the ATP-dependent breakage of single-stranded DNA followed by passage and rejoining%2C maintains net negative superhelicity;Dbxref=InterPro:IPR000380,InterPro:IPR003601,InterPro:IPR003602,InterPro:IPR005733,InterPro:IPR006154,InterPro:IPR006171,InterPro:IPR013263,InterPro:IPR013497,InterPro:IPR013498,InterPro:IPR013824,UniProtKB%2FTrEMBL:Q7CIL8,Genbank:YP_002347190.1,GeneID:1175052;gbkey=CDS;gene=topA;product=DNA topoisomerase I;protein_id=YP_002347190.1;transl_table=11
NC_003143.1	RefSeq	region	2491966	2492010	.	+	.	ID=id1546;Note=PS00396 Prokaryotic DNA topoisomerase I active site.;Dbxref=GeneID:1175052;gbkey=misc_feature;gene=topA
NC_003143.1	RefSeq	gene	2494036	2495010	.	+	.	ID=gene2142;Name=cysB;Dbxref=GeneID:1175053;gbkey=Gene;gene=cysB;locus_tag=YPO2219
NC_003143.1	RefSeq	CDS	2494036	2495010	.	+	0	ID=cds2046;Name=YP_002347191.1;Parent=gene2142;Note=LysR-type transcriptional regulator%3B contains helix-turn-helix %28HTH%29 motif%3B in Escherichia coli this protein regulates cysteine biosynthesis by controlling expression of the cys regulon%3B autoregulates expression%3B crystal structure of Klebsiella aerogenes showed tetramer formation;Dbxref=InterPro:IPR000847,InterPro:IPR005119,InterPro:IPR011991,UniProtKB%2FTrEMBL:Q7CIL7,Genbank:YP_002347191.1,GeneID:1175053;gbkey=CDS;gene=cysB;product=transcriptional regulator CysB;protein_id=YP_002347191.1;transl_table=11
NC_003143.1	RefSeq	region	2494087	2494179	.	+	.	ID=id1547;Note=PS00044 Bacterial regulatory proteins%2C lysR family signature.;Dbxref=GeneID:1175053;gbkey=misc_feature;gene=cysB
NC_003143.1	RefSeq	region	2494249	2494290	.	+	.	ID=id1548;Note=PS00165 Serine%2Fthreonine dehydratases pyridoxal-phosphate attachment site.;Dbxref=GeneID:1175053;gbkey=misc_feature;gene=cysB
NC_003143.1	RefSeq	ribosome_entry_site	2495337	2495340	.	+	.	ID=id1549;gbkey=RBS
NC_003143.1	RefSeq	gene	2495346	2496203	.	+	.	ID=gene2143;Name=YPO2220;Dbxref=GeneID:1175054;gbkey=Gene;locus_tag=YPO2220
NC_003143.1	RefSeq	CDS	2495346	2496203	.	+	0	ID=cds2047;Name=YP_002347192.1;Parent=gene2143;Note=No significant database hits;Dbxref=UniProtKB%2FTrEMBL:Q7CIL6,Genbank:YP_002347192.1,GeneID:1175054;gbkey=CDS;product=hypothetical protein;protein_id=YP_002347192.1;transl_table=11
NC_003143.1	RefSeq	ribosome_entry_site	2496558	2496562	.	+	.	ID=id1550;gbkey=RBS
NC_003143.1	RefSeq	gene	2496567	2499239	.	+	.	ID=gene2144;Name=acnA;Dbxref=GeneID:1175055;gbkey=Gene;gene=acnA;locus_tag=YPO2221
NC_003143.1	RefSeq	CDS	2496567	2499239	.	+	0	ID=cds2048;Name=YP_002347193.1;Parent=gene2144;Note=Catalyzes the conversion of citrate to isocitrate;Dbxref=InterPro:IPR000573,InterPro:IPR001030,InterPro:IPR006249,InterPro:IPR012084,UniProtKB%2FTrEMBL:Q7CIL5,Genbank:YP_002347193.1,GeneID:1175055;gbkey=CDS;gene=acnA;product=aconitate hydratase;protein_id=YP_002347193.1;transl_table=11
NC_003143.1	RefSeq	region	2497800	2497823	.	+	.	ID=id1551;Note=PS00017 ATP%2FGTP-binding site motif A %28P-loop%29.;Dbxref=GeneID:1175055;gbkey=misc_feature;gene=acnA
NC_003143.1	RefSeq	region	2497845	2497895	.	+	.	ID=id1552;Note=PS00450 Aconitase family signature 1.;Dbxref=GeneID:1175055;gbkey=misc_feature;gene=acnA
NC_003143.1	RefSeq	region	2498043	2498084	.	+	.	ID=id1553;Note=PS01244 Aconitase family signature 2.;Dbxref=GeneID:1175055;gbkey=misc_feature;gene=acnA
NC_003143.1	RefSeq	gene	2499403	2499993	.	-	.	ID=gene2145;Name=ribA;Dbxref=GeneID:1175056;gbkey=Gene;gene=ribA;locus_tag=YPO2222
NC_003143.1	RefSeq	CDS	2499403	2499993	.	-	0	ID=cds2049;Name=YP_002347194.1;Parent=gene2145;Note=catalyzes the conversion of GTP to formate and 2%2C5-diamino-6-hydroxy-4-%285-phosphoribosylamino%29pyrimidine and diphosphate;Dbxref=InterPro:IPR000408,InterPro:IPR000926,UniProtKB%2FTrEMBL:Q0WEU4,Genbank:YP_002347194.1,GeneID:1175056;gbkey=CDS;gene=ribA;product=GTP cyclohydrolase II;protein_id=YP_002347194.1;transl_table=11
NC_003143.1	RefSeq	region	2499886	2499918	.	-	.	ID=id1554;Note=PS00626 Regulator of chromosome condensation %28RCC1%29 signature 2.;Dbxref=GeneID:1175056;gbkey=misc_feature;gene=ribA
NC_003143.1	RefSeq	gene	2500499	2501260	.	+	.	ID=gene2146;Name=pgpB;Dbxref=GeneID:1175057;gbkey=Gene;gene=pgpB;locus_tag=YPO2223
NC_003143.1	RefSeq	CDS	2500499	2501260	.	+	0	ID=cds2050;Name=YP_002347195.1;Parent=gene2146;Dbxref=InterPro:IPR000326,InterPro:IPR008934,UniProtKB%2FTrEMBL:Q7CIL4,Genbank:YP_002347195.1,GeneID:1175057;gbkey=CDS;gene=pgpB;product=phosphatidylglycerophosphatase B;protein_id=YP_002347195.1;transl_table=11
NC_003143.1	RefSeq	gene	2501429	2501740	.	+	.	ID=gene2147;Name=YPO2224;Dbxref=GeneID:1175058;gbkey=Gene;locus_tag=YPO2224
NC_003143.1	RefSeq	CDS	2501429	2501740	.	+	0	ID=cds2051;Name=YP_002347196.1;Parent=gene2147;Dbxref=InterPro:IPR002355,InterPro:IPR010445,UniProtKB%2FTrEMBL:Q0WEU2,Genbank:YP_002347196.1,GeneID:1175058;gbkey=CDS;product=hypothetical protein;protein_id=YP_002347196.1;transl_table=11
NC_003143.1	RefSeq	region	2501537	2501599	.	+	.	ID=id1555;Note=PS00079 Multicopper oxidases signature 1.;Dbxref=GeneID:1175058;gbkey=misc_feature
NC_003143.1	RefSeq	gene	2501747	2502916	.	+	.	ID=gene2148;Name=YPO2225;Dbxref=GeneID:1175059;gbkey=Gene;locus_tag=YPO2225
NC_003143.1	RefSeq	CDS	2501747	2502916	.	+	0	ID=cds2052;Name=YP_002347197.1;Parent=gene2148;Dbxref=InterPro:IPR011990,InterPro:IPR013026,InterPro:IPR013105,UniProtKB%2FTrEMBL:Q7CIL3,Genbank:YP_002347197.1,GeneID:1175059;gbkey=CDS;product=hypothetical protein;protein_id=YP_002347197.1;transl_table=11
NC_003143.1	RefSeq	gene	2503038	2503340	.	-	.	ID=gene2149;Name=YPO2226;Dbxref=GeneID:1175060;gbkey=Gene;locus_tag=YPO2226
NC_003143.1	RefSeq	CDS	2503038	2503340	.	-	0	ID=cds2053;Name=YP_002347198.1;Parent=gene2149;Note=No significant database hits;Dbxref=InterPro:IPR010985,InterPro:IPR013321,UniProtKB%2FTrEMBL:Q7CIL2,Genbank:YP_002347198.1,GeneID:1175060;gbkey=CDS;product=hypothetical protein;protein_id=YP_002347198.1;transl_table=11
NC_003143.1	RefSeq	gene	2503807	2504544	.	+	.	ID=gene2150;Name=pyrF;Dbxref=GeneID:1175061;gbkey=Gene;gene=pyrF;locus_tag=YPO2227
NC_003143.1	RefSeq	CDS	2503807	2504544	.	+	0	ID=cds2054;Name=YP_002347199.1;Parent=gene2150;Note=type 1 subfamily%3B involved in last step of pyrimidine biosynthesis%3B converts orotidine 5%27-phosphate to UMP and carbon dioxide%3B OMP decarboxylase%3B OMPDCase%3B OMPdecase;Dbxref=InterPro:IPR001754,InterPro:IPR011060,UniProtKB%2FTrEMBL:Q0WET9,Genbank:YP_002347199.1,GeneID:1175061;gbkey=CDS;gene=pyrF;product=orotidine 5%27-phosphate decarboxylase;protein_id=YP_002347199.1;transl_table=11
NC_003143.1	RefSeq	region	2504008	2504049	.	+	.	ID=id1556;Note=PS00156 Orotidine 5%27-phosphate decarboxylase active site.;Dbxref=GeneID:1175061;gbkey=misc_feature;gene=pyrF
NC_003143.1	RefSeq	gene	2504544	2504870	.	+	.	ID=gene2151;Name=pyrF;Dbxref=GeneID:1175062;gbkey=Gene;gene=pyrF;locus_tag=YPO2228
NC_003143.1	RefSeq	CDS	2504544	2504870	.	+	0	ID=cds2055;Name=YP_002347200.1;Parent=gene2151;Note=involved in start site selection during the initiation of translation;Dbxref=InterPro:IPR001950,InterPro:IPR005872,UniProtKB%2FTrEMBL:Q7CIL1,Genbank:YP_002347200.1,GeneID:1175062;gbkey=CDS;product=translation initiation factor Sui1;protein_id=YP_002347200.1;transl_table=11
NC_003143.1	RefSeq	region	2504787	2504810	.	+	.	ID=id1557;Note=PS01118 Translation initiation factor SUI1 signature.;Dbxref=GeneID:1175062;gbkey=misc_feature
NC_003143.1	RefSeq	gene	2505108	2505323	.	-	.	ID=gene2152;Name=osmB;Dbxref=GeneID:1175063;gbkey=Gene;gene=osmB;locus_tag=YPO2229
NC_003143.1	RefSeq	CDS	2505108	2505323	.	-	0	ID=cds2056;Name=YP_002347201.1;Parent=gene2152;Dbxref=UniProtKB%2FTrEMBL:Q7CIL0,Genbank:YP_002347201.1,GeneID:1175063;gbkey=CDS;gene=osmB;product=lipoprotein;protein_id=YP_002347201.1;transl_table=11
NC_003143.1	RefSeq	region	2505153	2505218	.	-	.	ID=id1558;Note=1 probable transmembrane helix predicted;Dbxref=GeneID:1175063;gbkey=misc_feature;gene=osmB
NC_003143.1	RefSeq	region	2505252	2505284	.	-	.	ID=id1559;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site.;Dbxref=GeneID:1175063;gbkey=misc_feature;gene=osmB
NC_003143.1	RefSeq	gene	2505803	2506498	.	+	.	ID=gene2153;Name=araD;Dbxref=GeneID:1175064;gbkey=Gene;gene=araD;locus_tag=YPO2230
NC_003143.1	RefSeq	CDS	2505803	2506498	.	+	0	ID=cds2057;Name=YP_002347202.1;Parent=gene2153;Note=catalyzes the isomerization of L-ribulose 5-phosphate to D-xylulose 5-phosphate in the anaerobic catabolism of L-ascorbate%3B links the arabinose metabolic pathway to the pentose phosphate pathway and allows the bacteria to use arabinose as an energy source;Dbxref=InterPro:IPR001303,InterPro:IPR004661,UniProtKB%2FTrEMBL:Q0WET6,Genbank:YP_002347202.1,GeneID:1175064;gbkey=CDS;gene=araD;product=L-ribulose-5-phosphate 4-epimerase;protein_id=YP_002347202.1;transl_table=11
NC_003143.1	RefSeq	gene	2506527	2506775	.	-	.	ID=gene2154;Name=YPO2231;Dbxref=GeneID:1175065;gbkey=Gene;locus_tag=YPO2231
NC_003143.1	RefSeq	CDS	2506527	2506775	.	-	0	ID=cds2058;Name=YP_002347203.1;Parent=gene2154;Note=No significant database hits;Dbxref=UniProtKB%2FTrEMBL:Q7CIK9,Genbank:YP_002347203.1,GeneID:1175065;gbkey=CDS;product=hypothetical protein;protein_id=YP_002347203.1;transl_table=11
NC_003143.1	RefSeq	ribosome_entry_site	2506784	2506787	.	-	.	ID=id1560;gbkey=RBS
NC_003143.1	RefSeq	gene	2507109	2507774	.	+	.	ID=gene2155;Name=mipB;Dbxref=GeneID:1175066;gbkey=Gene;gene=mipB;locus_tag=YPO2232
NC_003143.1	RefSeq	CDS	2507109	2507774	.	+	0	ID=cds2059;Name=YP_002347204.1;Parent=gene2155;Note=similar to transaldolase from Escherichia coli%3B many organisms have multiple copies;Dbxref=InterPro:IPR001585,InterPro:IPR004731,InterPro:IPR013785,UniProtKB%2FTrEMBL:Q0WET4,Genbank:YP_002347204.1,GeneID:1175066;gbkey=CDS;gene=mipB;product=fructose-6-phosphate aldolase;protein_id=YP_002347204.1;transl_table=11
NC_003143.1	RefSeq	region	2507178	2507204	.	+	.	ID=id1561;Note=PS01054 Transaldolase signature 1.;Dbxref=GeneID:1175066;gbkey=misc_feature;gene=mipB
NC_003143.1	RefSeq	region	2507352	2507405	.	+	.	ID=id1562;Note=PS00958 Transaldolase active site.;Dbxref=GeneID:1175066;gbkey=misc_feature;gene=mipB
NC_003143.1	RefSeq	gene	2507891	2508196	.	-	.	ID=gene2156;Name=YPO2233;Dbxref=GeneID:1175067;gbkey=Gene;locus_tag=YPO2233
NC_003143.1	RefSeq	CDS	2507891	2508196	.	-	0	ID=cds2060;Name=YP_002347205.1;Parent=gene2156;Dbxref=InterPro:IPR007423,UniProtKB%2FTrEMBL:Q0WET3,Genbank:YP_002347205.1,GeneID:1175067;gbkey=CDS;product=hypothetical protein;protein_id=YP_002347205.1;transl_table=11
NC_003143.1	RefSeq	gene	2508189	2510255	.	-	.	ID=gene2157;Name=cstA;Dbxref=GeneID:1175068;gbkey=Gene;gene=cstA;locus_tag=YPO2234
NC_003143.1	RefSeq	CDS	2508189	2510255	.	-	0	ID=cds2061;Name=YP_002347206.1;Parent=gene2157;Dbxref=InterPro:IPR003706,UniProtKB%2FTrEMBL:Q0WET2,Genbank:YP_002347206.1,GeneID:1175068;gbkey=CDS;gene=cstA;product=carbon starvation protein A;protein_id=YP_002347206.1;transl_table=11
NC_003143.1	RefSeq	ribosome_entry_site	2508202	2508208	.	-	.	ID=id1563;Dbxref=GeneID:1175068;gbkey=RBS;gene=cstA
NC_003143.1	RefSeq	ribosome_entry_site	2510265	2510270	.	-	.	ID=id1564;gbkey=RBS
NC_003143.1	RefSeq	gene	2510605	2512539	.	-	.	ID=gene2158;Name=rnb;Dbxref=GeneID:1175069;gbkey=Gene;gene=rnb;locus_tag=YPO2235
NC_003143.1	RefSeq	CDS	2510605	2512539	.	-	0	ID=cds2062;Name=YP_002347207.1;Parent=gene2158;Note=Involved in mRNA degradation. Hydrolyzes single-stranded polyribonucleotides processively in the 3%27 to 5%27 direction;Dbxref=InterPro:IPR001900,InterPro:IPR003029,InterPro:IPR004476,InterPro:IPR008994,InterPro:IPR011129,InterPro:IPR011804,InterPro:IPR012340,InterPro:IPR013223,UniProtKB%2FTrEMBL:Q0WET1,Genbank:YP_002347207.1,GeneID:1175069;gbkey=CDS;gene=rnb;product=exoribonuclease II;protein_id=YP_002347207.1;transl_table=11
NC_003143.1	RefSeq	region	2511016	2511090	.	-	.	ID=id1565;Note=PS01175 Ribonuclease II family signature.;Dbxref=GeneID:1175069;gbkey=misc_feature;gene=rnb
NC_003143.1	RefSeq	ribosome_entry_site	2513177	2513181	.	+	.	ID=id1566;gbkey=RBS
NC_003143.1	RefSeq	gene	2513188	2514498	.	+	.	ID=gene2159;Name=YPO2237;Dbxref=GeneID:1175070;gbkey=Gene;locus_tag=YPO2237
NC_003143.1	RefSeq	CDS	2513188	2514498	.	+	0	ID=cds2063;Name=YP_002347208.1;Parent=gene2159;Dbxref=InterPro:IPR007114,InterPro:IPR011701,UniProtKB%2FTrEMBL:Q7CIK8,Genbank:YP_002347208.1,GeneID:1175070;gbkey=CDS;product=hypothetical protein;protein_id=YP_002347208.1;transl_table=11
NC_003143.1	RefSeq	ribosome_entry_site	2514521	2514527	.	+	.	ID=id1567;gbkey=RBS
NC_003143.1	RefSeq	gene	2514533	2515534	.	+	.	ID=gene2160;Name=YPO2238;Dbxref=GeneID:1175071;gbkey=Gene;locus_tag=YPO2238
NC_003143.1	RefSeq	CDS	2514533	2515534	.	+	0	ID=cds2064;Name=YP_002347209.1;Parent=gene2160;Dbxref=InterPro:IPR001509,UniProtKB%2FTrEMBL:Q7CIK7,Genbank:YP_002347209.1,GeneID:1175071;gbkey=CDS;product=hypothetical protein;protein_id=YP_002347209.1;transl_table=11
NC_003143.1	RefSeq	gene	2515717	2516358	.	-	.	ID=gene2161;Name=nth;Dbxref=GeneID:1175072;gbkey=Gene;gene=nth;locus_tag=YPO2239
NC_003143.1	RefSeq	CDS	2515717	2516358	.	-	0	ID=cds2065;Name=YP_002347210.1;Parent=gene2161;Note=DNA-%28apurinic or apyrimidinic site%29 lyase%3B has apurinic or apyrimidinic endonuclease activity and DNA N-glycosylase activity%3B removed damaged DNA at cytosines%2C thymines and guanines;Dbxref=InterPro:IPR000445,InterPro:IPR003265,InterPro:IPR003583,InterPro:IPR003651,InterPro:IPR004035,InterPro:IPR004036,InterPro:IPR005759,InterPro:IPR011257,UniProtKB%2FTrEMBL:Q7CIK6,Genbank:YP_002347210.1,GeneID:1175072;gbkey=CDS;gene=nth;product=endonuclease III;protein_id=YP_002347210.1;transl_table=11
NC_003143.1	RefSeq	region	2515750	2515800	.	-	.	ID=id1568;Note=PS00764 Endonuclease III iron-sulfur binding region signature.;Dbxref=GeneID:1175072;gbkey=misc_feature;gene=nth
NC_003143.1	RefSeq	region	2515966	2516055	.	-	.	ID=id1569;Note=PS01155 Endonuclease III family signature.;Dbxref=GeneID:1175072;gbkey=misc_feature;gene=nth
NC_003143.1	RefSeq	gene	2516355	2517056	.	-	.	ID=gene2162;Name=nth;Dbxref=GeneID:1175073;gbkey=Gene;gene=nth;locus_tag=YPO2240
NC_003143.1	RefSeq	CDS	2516355	2517056	.	-	0	ID=cds2066;Name=YP_002347211.1;Parent=gene2162;Note=in Excherichia coli RsxABCDEG reduces SoxR which turns off induction of SoxS transcription factor in the absence of oxidizing agents%3B similar to the rnfABCDGE operon in Rhodobacter capsulatus involved in transferring electrons to nitrogenase;Dbxref=InterPro:IPR003667,InterPro:IPR010968,UniProtKB%2FTrEMBL:Q0WES7,Genbank:YP_002347211.1,GeneID:1175073;gbkey=CDS;product=electron transport complex RsxE subunit;protein_id=YP_002347211.1;transl_table=11
NC_003143.1	RefSeq	gene	2517053	2517682	.	-	.	ID=gene2163;Name=YPO2241;Dbxref=GeneID:1175074;gbkey=Gene;locus_tag=YPO2241
NC_003143.1	RefSeq	CDS	2517053	2517682	.	-	0	ID=cds2067;Name=YP_002347212.1;Parent=gene2163;Note=part of membrane-bound complex hought to be involved in electron transport to nitrogen;Dbxref=InterPro:IPR007329,InterPro:IPR010209,UniProtKB%2FTrEMBL:Q0WES6,Genbank:YP_002347212.1,GeneID:1175074;gbkey=CDS;product=electron transport complex protein RnfG;protein_id=YP_002347212.1;transl_table=11
NC_003143.1	RefSeq	ribosome_entry_site	2517064	2517067	.	-	.	ID=id1570;Dbxref=GeneID:1175074;gbkey=RBS
NC_003143.1	RefSeq	ribosome_entry_site	2517688	2517693	.	-	.	ID=id1571;gbkey=RBS
NC_003143.1	RefSeq	gene	2517692	2518747	.	-	.	ID=gene2164;Name=rnfD;Dbxref=GeneID:1175075;gbkey=Gene;gene=rnfD;locus_tag=YPO2242
NC_003143.1	RefSeq	CDS	2517692	2518747	.	-	0	ID=cds2068;Name=YP_002347213.1;Parent=gene2164;Note=RnfD%3B RsxD%3B required for nitrogen fixation in Rhodobacter capsulatus%3B part of a membrane-bound complex thought to be involved in electron transport to nitrogenase%3B in Escherichia coli this gene is part of a cluster controlling SoxR-mediated induction of the SoxS transcription factor in the absence of oxidizing agents;Dbxref=InterPro:IPR004338,InterPro:IPR011303,Genbank:YP_002347213.1,GeneID:1175075;gbkey=CDS;gene=rnfD;product=electron transport complex protein RnfD;protein_id=YP_002347213.1;transl_table=11
NC_003143.1	RefSeq	gene	2519275	2520168	.	+	.	ID=gene2165;Name=YPO2243;Dbxref=GeneID:1175076;gbkey=Gene;locus_tag=YPO2243
NC_003143.1	RefSeq	CDS	2519275	2520168	.	+	0	ID=cds2069;Name=YP_002347214.1;Parent=gene2165;Dbxref=InterPro:IPR000005,InterPro:IPR009057,InterPro:IPR011256,InterPro:IPR012287,UniProtKB%2FTrEMBL:Q7CIK5,Genbank:YP_002347214.1,GeneID:1175076;gbkey=CDS;product=AraC family transcriptional regulator;protein_id=YP_002347214.1;transl_table=11
NC_003143.1	RefSeq	region	2519344	2519409	.	+	.	ID=id1572;Note=Predicted helix-turn-helix motif with score 1268 %28%2B3.51 SD%29 at aa 24-45%2C sequence PTLDDVAKISGYSKWHLQRKFK;Dbxref=GeneID:1175076;gbkey=misc_feature
NC_003143.1	RefSeq	gene	2520273	2522135	.	-	.	ID=gene2166;Name=YPO2244;Dbxref=GeneID:1175077;gbkey=Gene;locus_tag=YPO2244
NC_003143.1	RefSeq	CDS	2520273	2522135	.	-	0	ID=cds2070;Name=YP_002347215.1;Parent=gene2166;Note=part of membrane-bound complex thought to be involved in electron transport to nitrogen;Dbxref=InterPro:IPR001450,InterPro:IPR009051,InterPro:IPR010208,InterPro:IPR011538,InterPro:IPR012285,UniProtKB%2FTrEMBL:Q0WES3,Genbank:YP_002347215.1,GeneID:1175077;gbkey=CDS;product=electron transport complex protein RnfC;protein_id=YP_002347215.1;transl_table=11
NC_003143.1	RefSeq	region	2520855	2520890	.	-	.	ID=id1573;Note=PS00198 4Fe-4S ferredoxins%2C iron-sulfur binding region signature.;Dbxref=GeneID:1175077;gbkey=misc_feature
NC_003143.1	RefSeq	region	2520972	2521007	.	-	.	ID=id1574;Note=PS00198 4Fe-4S ferredoxins%2C iron-sulfur binding region signature.;Dbxref=GeneID:1175077;gbkey=misc_feature
NC_003143.1	RefSeq	ribosome_entry_site	2522140	2522143	.	-	.	ID=id1575;gbkey=RBS
NC_003143.1	RefSeq	gene	2522185	2522751	.	-	.	ID=gene2167;Name=YPO2245;Dbxref=GeneID:1175078;gbkey=Gene;locus_tag=YPO2245
NC_003143.1	RefSeq	CDS	2522185	2522751	.	-	0	ID=cds2071;Name=YP_002347216.1;Parent=gene2167;Note=part of membrane-bound complex thought to be involved in electron transport to nitrogen;Dbxref=InterPro:IPR001450,InterPro:IPR007202,InterPro:IPR010207,UniProtKB%2FTrEMBL:Q0WES2,Genbank:YP_002347216.1,GeneID:1175078;gbkey=CDS;product=electron transport complex protein RnfB;protein_id=YP_002347216.1;transl_table=11
NC_003143.1	RefSeq	region	2522278	2522313	.	-	.	ID=id1576;Note=PS00198 4Fe-4S ferredoxins%2C iron-sulfur binding region signature.;Dbxref=GeneID:1175078;gbkey=misc_feature
NC_003143.1	RefSeq	region	2522368	2522403	.	-	.	ID=id1577;Note=PS00198 4Fe-4S ferredoxins%2C iron-sulfur binding region signature.;Dbxref=GeneID:1175078;gbkey=misc_feature
NC_003143.1	RefSeq	region	2522674	2522739	.	-	.	ID=id1578;Note=1 probable transmembrane helix predicted;Dbxref=GeneID:1175078;gbkey=misc_feature
NC_003143.1	RefSeq	gene	2522751	2523332	.	-	.	ID=gene2168;Name=YPO2246;Dbxref=GeneID:1175079;gbkey=Gene;locus_tag=YPO2246
NC_003143.1	RefSeq	CDS	2522751	2523332	.	-	0	ID=cds2072;Name=YP_002347217.1;Parent=gene2168;Dbxref=InterPro:IPR003667,InterPro:IPR011293,UniProtKB%2FTrEMBL:Q0WES1,Genbank:YP_002347217.1,GeneID:1175079;gbkey=CDS;product=Na%28%2B%29-translocating NADH-quinone reductase subunit E;protein_id=YP_002347217.1;transl_table=11
NC_003143.1	RefSeq	gene	2523460	2523903	.	-	.	ID=gene2169;Name=YPO2247;Dbxref=GeneID:1175080;gbkey=Gene;locus_tag=YPO2247
NC_003143.1	RefSeq	CDS	2523460	2523903	.	-	0	ID=cds2073;Name=YP_002347218.1;Parent=gene2169;Dbxref=UniProtKB%2FTrEMBL:Q7CIK4,Genbank:YP_002347218.1,GeneID:1175080;gbkey=CDS;product=hypothetical protein;protein_id=YP_002347218.1;transl_table=11
NC_003143.1	RefSeq	ribosome_entry_site	2524366	2524369	.	+	.	ID=id1579;gbkey=RBS
NC_003143.1	RefSeq	gene	2524378	2526436	.	+	.	ID=gene2170;Name=YPO2249;Dbxref=GeneID:1175081;gbkey=Gene;locus_tag=YPO2249;pseudo=true
NC_003143.1	RefSeq	region	2525866	2525889	.	+	.	ID=id1580;Note=PS00017 ATP%2FGTP-binding site motif A %28P-loop%29.;Dbxref=GeneID:1175081;gbkey=misc_feature
NC_003143.1	RefSeq	gene	2526461	2527830	.	+	.	ID=gene2171;Name=YPO2250;Dbxref=GeneID:1175082;gbkey=Gene;locus_tag=YPO2250;pseudo=true
NC_003143.1	RefSeq	region	2526599	2526652	.	+	.	ID=id1581;Note=1 probable transmembrane helix predicted;Dbxref=GeneID:1175082;gbkey=misc_feature
NC_003143.1	RefSeq	region	2527307	2527336	.	+	.	ID=id1582;Note=PS00142 Neutral zinc metallopeptidases%2C zinc-binding region signature.;Dbxref=GeneID:1175082;gbkey=misc_feature
NC_003143.1	RefSeq	region	2527717	2527785	.	+	.	ID=id1583;Note=PS00543 HlyD family secretion proteins signature.;Dbxref=GeneID:1175082;gbkey=misc_feature
NC_003143.1	RefSeq	ribosome_entry_site	2527821	2527824	.	+	.	ID=id1584;Dbxref=GeneID:1175082;gbkey=RBS
NC_003143.1	RefSeq	gene	2527832	2529970	.	+	.	ID=gene2172;Name=YPO2252;Dbxref=GeneID:1175083;gbkey=Gene;locus_tag=YPO2252
NC_003143.1	RefSeq	CDS	2527832	2529970	.	+	0	ID=cds2074;Name=YP_002347219.1;Parent=gene2172;Dbxref=InterPro:IPR001140,InterPro:IPR003439,InterPro:IPR003593,InterPro:IPR005074,InterPro:IPR010132,InterPro:IPR011527,UniProtKB%2FTrEMBL:Q7CIK3,Genbank:YP_002347219.1,GeneID:1175083;gbkey=CDS;product=toxin transport protein;protein_id=YP_002347219.1;transl_table=11
NC_003143.1	RefSeq	region	2529353	2529376	.	+	.	ID=id1585;Note=PS00017 ATP%2FGTP-binding site motif A %28P-loop%29.;Dbxref=GeneID:1175083;gbkey=misc_feature
NC_003143.1	RefSeq	region	2529665	2529709	.	+	.	ID=id1586;Note=PS00211 ABC transporters family signature.;Dbxref=GeneID:1175083;gbkey=misc_feature
NC_003143.1	RefSeq	gene	2530160	2531662	.	-	.	ID=gene2173;Name=araA;Dbxref=GeneID:1175084;gbkey=Gene;gene=araA;locus_tag=YPO2253
NC_003143.1	RefSeq	CDS	2530160	2531662	.	-	0	ID=cds2075;Name=YP_002347220.1;Parent=gene2173;Note=catalyzes the formation of L-ribulose from L-arabinose in L-arabinose catabolism;Dbxref=InterPro:IPR003762,UniProtKB%2FTrEMBL:Q0WER8,Genbank:YP_002347220.1,GeneID:1175084;gbkey=CDS;gene=araA;product=L-arabinose isomerase;protein_id=YP_002347220.1;transl_table=11
NC_003143.1	RefSeq	ribosome_entry_site	2531669	2531672	.	-	.	ID=id1587;gbkey=RBS
NC_003143.1	RefSeq	gene	2531746	2533449	.	-	.	ID=gene2174;Name=araB;Dbxref=GeneID:1175085;gbkey=Gene;gene=araB;locus_tag=YPO2254
NC_003143.1	RefSeq	CDS	2531746	2533449	.	-	0	ID=cds2076;Name=YP_002347221.1;Parent=gene2174;Note=catalyzes the phosphorylation of ribulose to ribulose 5-phosphate;Dbxref=InterPro:IPR000577,InterPro:IPR005929,UniProtKB%2FTrEMBL:Q0WER7,Genbank:YP_002347221.1,GeneID:1175085;gbkey=CDS;gene=araB;product=ribulokinase;protein_id=YP_002347221.1;transl_table=11
NC_003143.1	RefSeq	ribosome_entry_site	2533458	2533462	.	-	.	ID=id1588;gbkey=RBS
NC_003143.1	RefSeq	ribosome_entry_site	2533847	2533850	.	+	.	ID=id1589;gbkey=RBS
NC_003143.1	RefSeq	gene	2533857	2534840	.	+	.	ID=gene2175;Name=araF;Dbxref=GeneID:1175086;gbkey=Gene;gene=araF;locus_tag=YPO2255
NC_003143.1	RefSeq	CDS	2533857	2534840	.	+	0	ID=cds2077;Name=YP_002347222.1;Parent=gene2175;Dbxref=InterPro:IPR001761,UniProtKB%2FTrEMBL:Q7CIK2,Genbank:YP_002347222.1,GeneID:1175086;gbkey=CDS;gene=araF;product=L-arabinose-binding protein;protein_id=YP_002347222.1;transl_table=11
NC_003143.1	RefSeq	gene	2534938	2536509	.	+	.	ID=gene2176;Name=araG;Dbxref=GeneID:1175087;gbkey=Gene;gene=araG;locus_tag=YPO2256
NC_003143.1	RefSeq	CDS	2534938	2536509	.	+	0	ID=cds2078;Name=YP_002347223.1;Parent=gene2176;Note=Part of the ABC transporter complex AraFGH involved in the high affinity transport of arabinose;Dbxref=InterPro:IPR003439,InterPro:IPR003593,UniProtKB%2FTrEMBL:Q0WER5,Genbank:YP_002347223.1,GeneID:1175087;gbkey=CDS;gene=araG;product=L-arabinose transporter ATP-binding protein;protein_id=YP_002347223.1;transl_table=11
NC_003143.1	RefSeq	region	2534998	2535021	.	+	.	ID=id1590;Note=PS00017 ATP%2FGTP-binding site motif A %28P-loop%29.;Dbxref=GeneID:1175087;gbkey=misc_feature;gene=araG
NC_003143.1	RefSeq	region	2535091	2535114	.	+	.	ID=id1591;Note=PS00017 ATP%2FGTP-binding site motif A %28P-loop%29.;Dbxref=GeneID:1175087;gbkey=misc_feature;gene=araG
NC_003143.1	RefSeq	region	2536171	2536215	.	+	.	ID=id1592;Note=PS00211 ABC transporters family signature.;Dbxref=GeneID:1175087;gbkey=misc_feature;gene=araG
NC_003143.1	RefSeq	ribosome_entry_site	2536515	2536520	.	+	.	ID=id1593;gbkey=RBS
NC_003143.1	RefSeq	gene	2536527	2537576	.	+	.	ID=gene2177;Name=araH;Dbxref=GeneID:1175088;gbkey=Gene;gene=araH;locus_tag=YPO2257
NC_003143.1	RefSeq	CDS	2536527	2537576	.	+	0	ID=cds2079;Name=YP_002347224.1;Parent=gene2177;Note=Part of the ABC transporter complex AraFGH involved in the high affinity transport of arabinose;Dbxref=InterPro:IPR001851,UniProtKB%2FTrEMBL:Q0WER4,Genbank:YP_002347224.1,GeneID:1175088;gbkey=CDS;gene=araH;product=L-arabinose transporter permease;protein_id=YP_002347224.1;transl_table=11
NC_003143.1	RefSeq	ribosome_entry_site	2537787	2537791	.	+	.	ID=id1594;gbkey=RBS
NC_003143.1	RefSeq	gene	2537797	2538729	.	+	.	ID=gene2178;Name=araC;Dbxref=GeneID:1175089;gbkey=Gene;gene=araC;locus_tag=YPO2258
NC_003143.1	RefSeq	CDS	2537797	2538729	.	+	0	ID=cds2080;Name=YP_002347225.1;Parent=gene2178;Note=positive and negative regulator%3B regulates the araBAD and araFGH operons and other genes involved in the transport and catabolism of L-arabinose;Dbxref=InterPro:IPR000005,InterPro:IPR003313,InterPro:IPR009057,InterPro:IPR012287,UniProtKB%2FTrEMBL:Q7CIK1,Genbank:YP_002347225.1,GeneID:1175089;gbkey=CDS;gene=araC;product=DNA-binding transcriptional regulator AraC;protein_id=YP_002347225.1;transl_table=11
NC_003143.1	RefSeq	region	2538394	2538459	.	+	.	ID=id1595;Note=Predicted helix-turn-helix motif with score 1772 %28%2B5.22 SD%29 at aa 200-221%2C sequence LRIDEVARHVCLSPSRLAHLFR;Dbxref=GeneID:1175089;gbkey=misc_feature;gene=araC
NC_003143.1	RefSeq	region	2538502	2538630	.	+	.	ID=id1596;Note=PS00041 Bacterial regulatory proteins%2C araC family signature.;Dbxref=GeneID:1175089;gbkey=misc_feature;gene=araC
NC_003143.1	RefSeq	ribosome_entry_site	2538846	2538849	.	+	.	ID=id1597;gbkey=RBS
NC_003143.1	RefSeq	gene	2538857	2539906	.	+	.	ID=gene2179;Name=YPO2259;Dbxref=GeneID:1175090;gbkey=Gene;locus_tag=YPO2259
NC_003143.1	RefSeq	CDS	2538857	2539906	.	+	0	ID=cds2081;Name=YP_002347226.1;Parent=gene2179;Dbxref=InterPro:IPR000683,InterPro:IPR004104,UniProtKB%2FTrEMBL:Q7CIK0,Genbank:YP_002347226.1,GeneID:1175090;gbkey=CDS;product=oxidoreductase;protein_id=YP_002347226.1;transl_table=11
NC_003143.1	RefSeq	gene	2540100	2541128	.	+	.	ID=gene2180;Name=YPO2260;Dbxref=GeneID:1175091;gbkey=Gene;locus_tag=YPO2260
NC_003143.1	RefSeq	CDS	2540100	2541128	.	+	0	ID=cds2082;Name=YP_002347227.1;Parent=gene2180;Dbxref=InterPro:IPR002657,UniProtKB%2FTrEMBL:Q7CIJ9,Genbank:YP_002347227.1,GeneID:1175091;gbkey=CDS;product=hypothetical protein;protein_id=YP_002347227.1;transl_table=11
NC_003143.1	RefSeq	ribosome_entry_site	2541317	2541322	.	+	.	ID=id1598;gbkey=RBS
NC_003143.1	RefSeq	gene	2541334	2541933	.	+	.	ID=gene2181;Name=YPO2261;Dbxref=GeneID:1175092;gbkey=Gene;locus_tag=YPO2261
NC_003143.1	RefSeq	CDS	2541334	2541933	.	+	0	ID=cds2083;Name=YP_002347228.1;Parent=gene2181;Note=No significant database hits;Dbxref=UniProtKB%2FTrEMBL:Q7CIJ8,Genbank:YP_002347228.1,GeneID:1175092;gbkey=CDS;product=hypothetical protein;protein_id=YP_002347228.1;transl_table=11
NC_003143.1	RefSeq	gene	2541982	2543526	.	-	.	ID=gene2182;Name=YPO2262;Dbxref=GeneID:1175093;gbkey=Gene;locus_tag=YPO2262
NC_003143.1	RefSeq	CDS	2541982	2543526	.	-	0	ID=cds2084;Name=YP_002347229.1;Parent=gene2182;Dbxref=InterPro:IPR010352,UniProtKB%2FTrEMBL:Q0WEQ9,Genbank:YP_002347229.1,GeneID:1175093;gbkey=CDS;product=hypothetical protein;protein_id=YP_002347229.1;transl_table=11
NC_003143.1	RefSeq	gene	2543766	2544941	.	-	.	ID=gene2183;Name=manA;Dbxref=GeneID:1175094;gbkey=Gene;gene=manA;gene_synonym=pmi;locus_tag=YPO2263
NC_003143.1	RefSeq	CDS	2543766	2544941	.	-	0	ID=cds2085;Name=YP_002347230.1;Parent=gene2183;Dbxref=InterPro:IPR001250,InterPro:IPR011051,UniProtKB%2FTrEMBL:Q74TS8,Genbank:YP_002347230.1,GeneID:1175094;gbkey=CDS;gene=manA;product=mannose-6-phosphate isomerase;protein_id=YP_002347230.1;transl_table=11
NC_003143.1	RefSeq	region	2544102	2544179	.	-	.	ID=id1599;Note=PS00966 Phosphomannose isomerase type I signature 2.;Dbxref=GeneID:1175094;gbkey=misc_feature;gene=manA
NC_003143.1	RefSeq	region	2544540	2544566	.	-	.	ID=id1600;Note=PS00965 Phosphomannose isomerase type I signature 1.;Dbxref=GeneID:1175094;gbkey=misc_feature;gene=manA
NC_003143.1	RefSeq	ribosome_entry_site	2545213	2545219	.	+	.	ID=id1601;gbkey=RBS
NC_003143.1	RefSeq	gene	2545225	2546622	.	+	.	ID=gene2184;Name=YPO2263a;Dbxref=GeneID:17699570;gbkey=Gene;locus_tag=YPO2263a
NC_003143.1	RefSeq	CDS	2545225	2546622	.	+	0	ID=cds2086;Name=YP_008853946.1;Parent=gene2184;Dbxref=Genbank:YP_008853946.1,GeneID:17699570;gbkey=CDS;product=fumarate hydratase;protein_id=YP_008853946.1;transl_table=11
NC_003143.1	RefSeq	region	2546173	2546202	.	+	.	ID=id1602;Note=PS00163 Fumarate lyases signature.;Dbxref=GeneID:17699570;gbkey=misc_feature
NC_003143.1	RefSeq	gene	2546702	2547637	.	-	.	ID=gene2185;Name=tus;Dbxref=GeneID:1175096;gbkey=Gene;gene=tus;locus_tag=YPO2265
NC_003143.1	RefSeq	CDS	2546702	2547637	.	-	0	ID=cds2087;Name=YP_002347232.1;Parent=gene2185;Note=binds to DNA replication terminator sequences to prevent passage of replication forks;Dbxref=InterPro:IPR008865,UniProtKB%2FTrEMBL:Q0WEQ6,Genbank:YP_002347232.1,GeneID:1175096;gbkey=CDS;gene=tus;product=DNA replication terminus site-binding protein;protein_id=YP_002347232.1;transl_table=11
NC_003143.1	RefSeq	gene	2548022	2549140	.	-	.	ID=gene2186;Name=YPO2266;Dbxref=GeneID:1175097;gbkey=Gene;locus_tag=YPO2266
NC_003143.1	RefSeq	CDS	2548022	2549140	.	-	0	ID=cds2088;Name=YP_002347233.1;Parent=gene2186;Dbxref=InterPro:IPR005829,InterPro:IPR007114,InterPro:IPR011701,UniProtKB%2FTrEMBL:Q0WEQ5,Genbank:YP_002347233.1,GeneID:1175097;gbkey=CDS;product=hypothetical protein;protein_id=YP_002347233.1;transl_table=11
NC_003143.1	RefSeq	region	2548784	2548834	.	-	.	ID=id1603;Note=PS00216 Sugar transport proteins signature 1.;Dbxref=GeneID:1175097;gbkey=misc_feature
NC_003143.1	RefSeq	gene	2549353	2550236	.	+	.	ID=gene2187;Name=YPO2267;Dbxref=GeneID:1175098;gbkey=Gene;locus_tag=YPO2267;pseudo=true
NC_003143.1	RefSeq	ribosome_entry_site	2550438	2550444	.	+	.	ID=id1604;gbkey=RBS
NC_003143.1	RefSeq	gene	2550453	2551670	.	+	.	ID=gene2188;Name=mlc;Dbxref=GeneID:1175099;gbkey=Gene;gene=mlc;locus_tag=YPO2268
NC_003143.1	RefSeq	CDS	2550453	2551670	.	+	0	ID=cds2089;Name=YP_002347234.1;Parent=gene2188;Dbxref=InterPro:IPR000600,InterPro:IPR011991,UniProtKB%2FTrEMBL:Q74TS7,Genbank:YP_002347234.1,GeneID:1175099;gbkey=CDS;gene=mlc;product=ROK family transcriptional regulator;protein_id=YP_002347234.1;transl_table=11
NC_003143.1	RefSeq	region	2550543	2550608	.	+	.	ID=id1605;Note=Predicted helix-turn-helix motif with score 1041 %28%2B2.73 SD%29 at aa 31-52%2C sequence ISRIELSKRAQLAPASITKIVR;Dbxref=GeneID:1175099;gbkey=misc_feature;gene=mlc
NC_003143.1	RefSeq	ribosome_entry_site	2551883	2551886	.	+	.	ID=id1606;gbkey=RBS
NC_003143.1	RefSeq	gene	2551894	2552562	.	+	.	ID=gene2189;Name=bioD;Dbxref=GeneID:1175100;gbkey=Gene;gene=bioD;locus_tag=YPO2269
NC_003143.1	RefSeq	CDS	2551894	2552562	.	+	0	ID=cds2090;Name=YP_002347235.1;Parent=gene2189;Note=DTB synthetase%3B dethiobiotin synthase%3B involved in production of dethiobiotin from ATP and 7%2C8-diaminononanoate and carbon dioxide%3B contains magnesium;Dbxref=InterPro:IPR002586,InterPro:IPR004472,UniProtKB%2FTrEMBL:Q0WEQ3,Genbank:YP_002347235.1,GeneID:1175100;gbkey=CDS;gene=bioD;product=dithiobiotin synthetase;protein_id=YP_002347235.1;transl_table=11
NC_003143.1	RefSeq	gene	2552703	2553947	.	-	.	ID=gene2190;Name=YPO2270;Dbxref=GeneID:1175101;gbkey=Gene;locus_tag=YPO2270
NC_003143.1	RefSeq	CDS	2552703	2553947	.	-	0	ID=cds2091;Name=YP_002347236.1;Parent=gene2190;Dbxref=InterPro:IPR001807,UniProtKB%2FTrEMBL:Q0WEQ2,Genbank:YP_002347236.1,GeneID:1175101;gbkey=CDS;product=voltage-gated ClC-type chloride channel ClcB;protein_id=YP_002347236.1;transl_table=11
NC_003143.1	RefSeq	repeat_region	2554162	2562920	.	+	.	ID=id1607;Note=prophage: some shotgun sequence suggests it could also exist as a tandem repeat%2C or as a circular intermediate;gbkey=repeat_region
NC_003143.1	RefSeq	stem_loop	2554184	2554243	.	+	.	ID=id1608;gbkey=stem_loop
NC_003143.1	RefSeq	gene	2554373	2554636	.	-	.	ID=gene2191;Name=YPO2271;Dbxref=GeneID:1175102;gbkey=Gene;locus_tag=YPO2271
NC_003143.1	RefSeq	CDS	2554373	2554636	.	-	0	ID=cds2092;Name=YP_002347237.1;Parent=gene2191;Dbxref=UniProtKB%2FTrEMBL:Q0WEQ1,Genbank:YP_002347237.1,GeneID:1175102;gbkey=CDS;product=hypothetical protein;protein_id=YP_002347237.1;transl_table=11
NC_003143.1	RefSeq	gene	2554658	2555065	.	-	.	ID=gene2192;Name=YPO2272;Dbxref=GeneID:1175103;gbkey=Gene;locus_tag=YPO2272
NC_003143.1	RefSeq	CDS	2554658	2555065	.	-	0	ID=cds2093;Name=YP_002347238.1;Parent=gene2192;Dbxref=UniProtKB%2FTrEMBL:Q0WEQ0,Genbank:YP_002347238.1,GeneID:1175103;gbkey=CDS;product=hypothetical protein;protein_id=YP_002347238.1;transl_table=11
NC_003143.1	RefSeq	gene	2555162	2555584	.	-	.	ID=gene2193;Name=YPO2273;Dbxref=GeneID:1175104;gbkey=Gene;locus_tag=YPO2273
NC_003143.1	RefSeq	CDS	2555162	2555584	.	-	0	ID=cds2094;Name=YP_002347239.1;Parent=gene2193;Dbxref=InterPro:IPR001387,InterPro:IPR010982,UniProtKB%2FTrEMBL:Q0WEP9,Genbank:YP_002347239.1,GeneID:1175104;gbkey=CDS;product=hypothetical protein;protein_id=YP_002347239.1;transl_table=11
NC_003143.1	RefSeq	gene	2555780	2556832	.	+	.	ID=gene2194;Name=YPO2274;Dbxref=GeneID:1175105;gbkey=Gene;locus_tag=YPO2274
NC_003143.1	RefSeq	CDS	2555780	2556832	.	+	0	ID=cds2095;Name=YP_002347240.1;Parent=gene2194;Dbxref=InterPro:IPR006516,UniProtKB%2FTrEMBL:Q0WEP8,Genbank:YP_002347240.1,GeneID:1175105;gbkey=CDS;product=hypothetical protein;protein_id=YP_002347240.1;transl_table=11
NC_003143.1	RefSeq	ribosome_entry_site	2556831	2556836	.	+	.	ID=id1609;gbkey=RBS
NC_003143.1	RefSeq	gene	2556844	2557161	.	+	.	ID=gene2195;Name=YPO2275;Dbxref=GeneID:1175106;gbkey=Gene;locus_tag=YPO2275
NC_003143.1	RefSeq	CDS	2556844	2557161	.	+	0	ID=cds2096;Name=YP_002347241.1;Parent=gene2195;Dbxref=UniProtKB%2FTrEMBL:Q0WEP7,Genbank:YP_002347241.1,GeneID:1175106;gbkey=CDS;product=hypothetical protein;protein_id=YP_002347241.1;transl_table=11
NC_003143.1	RefSeq	gene	2557164	2557415	.	+	.	ID=gene2196;Name=YPO2276;Dbxref=GeneID:1175107;gbkey=Gene;locus_tag=YPO2276
NC_003143.1	RefSeq	CDS	2557164	2557415	.	+	0	ID=cds2097;Name=YP_002347242.1;Parent=gene2196;Dbxref=UniProtKB%2FTrEMBL:Q0WEP6,Genbank:YP_002347242.1,GeneID:1175107;gbkey=CDS;product=phage-like membrane protein;protein_id=YP_002347242.1;transl_table=11
NC_003143.1	RefSeq	region	2557326	2557394	.	+	.	ID=id1610;Note=1 probable transmembrane helix predicted;Dbxref=GeneID:1175107;gbkey=misc_feature
NC_003143.1	RefSeq	gene	2557412	2557684	.	+	.	ID=gene2197;Name=YPO2276a;Dbxref=GeneID:1175108;gbkey=Gene;locus_tag=YPO2276a
NC_003143.1	RefSeq	CDS	2557412	2557684	.	+	0	ID=cds2098;Name=YP_002347243.1;Parent=gene2197;Dbxref=UniProtKB%2FTrEMBL:Q0WEP5,Genbank:YP_002347243.1,GeneID:1175108;gbkey=CDS;product=phage-like membrane protein;protein_id=YP_002347243.1;transl_table=11
NC_003143.1	RefSeq	ribosome_entry_site	2557737	2557740	.	+	.	ID=id1611;gbkey=RBS
NC_003143.1	RefSeq	gene	2557749	2559461	.	+	.	ID=gene2198;Name=YPO2277;Dbxref=GeneID:1175109;gbkey=Gene;locus_tag=YPO2277
NC_003143.1	RefSeq	CDS	2557749	2559461	.	+	0	ID=cds2099;Name=YP_002347244.1;Parent=gene2198;Dbxref=UniProtKB%2FTrEMBL:Q0WEP4,Genbank:YP_002347244.1,GeneID:1175109;gbkey=CDS;product=hypothetical protein;protein_id=YP_002347244.1;transl_table=11
NC_003143.1	RefSeq	ribosome_entry_site	2559460	2559466	.	+	.	ID=id1612;gbkey=RBS
NC_003143.1	RefSeq	gene	2559474	2559761	.	+	.	ID=gene2199;Name=YPO2278;Dbxref=GeneID:1175110;gbkey=Gene;locus_tag=YPO2278
NC_003143.1	RefSeq	CDS	2559474	2559761	.	+	0	ID=cds2100;Name=YP_002347245.1;Parent=gene2199;Dbxref=UniProtKB%2FTrEMBL:Q0WEP3,Genbank:YP_002347245.1,GeneID:1175110;gbkey=CDS;product=phage-like membrane protein;protein_id=YP_002347245.1;transl_table=11
NC_003143.1	RefSeq	gene	2559765	2560790	.	+	.	ID=gene2200;Name=YPO2279;Dbxref=GeneID:1175111;gbkey=Gene;locus_tag=YPO2279
NC_003143.1	RefSeq	CDS	2559765	2560790	.	+	0	ID=cds2101;Name=YP_002347246.1;Parent=gene2200;Dbxref=InterPro:IPR008900,UniProtKB%2FTrEMBL:Q0WEP2,Genbank:YP_002347246.1,GeneID:1175111;gbkey=CDS;product=phage-like membrane protein;protein_id=YP_002347246.1;transl_table=11
NC_003143.1	RefSeq	region	2559786	2559809	.	+	.	ID=id1613;Note=PS00017 ATP%2FGTP-binding site motif A %28P-loop%29.;Dbxref=GeneID:1175111;gbkey=misc_feature
NC_003143.1	RefSeq	region	2560416	2560484	.	+	.	ID=id1614;Note=1 probable transmembrane helix predicted;Dbxref=GeneID:1175111;gbkey=misc_feature
NC_003143.1	RefSeq	gene	2560790	2562034	.	+	.	ID=gene2201;Name=YPO2280;Dbxref=GeneID:1175112;gbkey=Gene;locus_tag=YPO2280
NC_003143.1	RefSeq	CDS	2560790	2562034	.	+	0	ID=cds2102;Name=YP_002347247.1;Parent=gene2201;Dbxref=InterPro:IPR004846,UniProtKB%2FTrEMBL:Q0WEP1,Genbank:YP_002347247.1,GeneID:1175112;gbkey=CDS;product=phage-like secreted protein;protein_id=YP_002347247.1;transl_table=11
NC_003143.1	RefSeq	region	2560802	2560834	.	+	.	ID=id1615;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site.;Dbxref=GeneID:1175112;gbkey=misc_feature
NC_003143.1	RefSeq	gene	2563093	2563203	.	-	.	ID=gene2202;Name=YPO2282;Dbxref=GeneID:1175114;gbkey=Gene;locus_tag=YPO2282
NC_003143.1	RefSeq	CDS	2563093	2563203	.	-	0	ID=cds2103;Name=YP_002347249.1;Parent=gene2202;Note=No significant database hits;Dbxref=UniProtKB%2FTrEMBL:Q0WEN9,Genbank:YP_002347249.1,GeneID:1175114;gbkey=CDS;product=hypothetical protein;protein_id=YP_002347249.1;transl_table=11
NC_003143.1	RefSeq	gene	2563325	2564341	.	-	.	ID=gene2203;Name=YPO2283;Dbxref=GeneID:1175115;gbkey=Gene;locus_tag=YPO2283
NC_003143.1	RefSeq	CDS	2563325	2564341	.	-	0	ID=cds2104;Name=YP_002347250.1;Parent=gene2203;Dbxref=InterPro:IPR000843,InterPro:IPR001761,InterPro:IPR010982,InterPro:IPR013318,UniProtKB%2FTrEMBL:Q7CIJ7,Genbank:YP_002347250.1,GeneID:1175115;gbkey=CDS;product=LacI family transcriptional regulator;protein_id=YP_002347250.1;transl_table=11
NC_003143.1	RefSeq	region	2564273	2564338	.	-	.	ID=id1616;Note=Predicted helix-turn-helix motif with score 1855 %28%2B5.50 SD%29 at aa 2-23%2C sequence ATMKDVALRAGVSVATVSRVLN;Dbxref=GeneID:1175115;gbkey=misc_feature
NC_003143.1	RefSeq	region	2564276	2564332	.	-	.	ID=id1617;Note=PS00356 Bacterial regulatory proteins%2C lacI family signature.;Dbxref=GeneID:1175115;gbkey=misc_feature
NC_003143.1	RefSeq	gene	2564405	2564878	.	-	.	ID=gene2204;Name=YPO2284;Dbxref=GeneID:1175116;gbkey=Gene;locus_tag=YPO2284
NC_003143.1	RefSeq	CDS	2564405	2564878	.	-	0	ID=cds2105;Name=YP_002347251.1;Parent=gene2204;Note=No significant database hits;Dbxref=UniProtKB%2FTrEMBL:Q7CIJ6,Genbank:YP_002347251.1,GeneID:1175116;gbkey=CDS;product=hypothetical protein;protein_id=YP_002347251.1;transl_table=11
NC_003143.1	RefSeq	gene	2565808	2566839	.	+	.	ID=gene2205;Name=YPO2286;Dbxref=GeneID:1175118;gbkey=Gene;locus_tag=YPO2286
NC_003143.1	RefSeq	CDS	2565808	2566839	.	+	0	ID=cds2106;Name=YP_002347253.1;Parent=gene2205;Dbxref=UniProtKB%2FTrEMBL:Q7CIJ5,Genbank:YP_002347253.1,GeneID:1175118;gbkey=CDS;product=hypothetical protein;protein_id=YP_002347253.1;transl_table=11
NC_003143.1	RefSeq	gene	2566843	2567664	.	+	.	ID=gene2206;Name=YPO2287;Dbxref=GeneID:1175119;gbkey=Gene;locus_tag=YPO2287
NC_003143.1	RefSeq	CDS	2566843	2567664	.	+	0	ID=cds2107;Name=YP_002347254.1;Parent=gene2206;Dbxref=InterPro:IPR000515,UniProtKB%2FTrEMBL:Q7CIJ4,Genbank:YP_002347254.1,GeneID:1175119;gbkey=CDS;product=transport system permease;protein_id=YP_002347254.1;transl_table=11
NC_003143.1	RefSeq	gene	2567955	2569595	.	-	.	ID=gene2207;Name=amn;Dbxref=GeneID:1175120;gbkey=Gene;gene=amn;locus_tag=YPO2288
NC_003143.1	RefSeq	CDS	2567955	2569595	.	-	0	ID=cds2108;Name=YP_002347255.1;Parent=gene2207;Note=Catalyzes the hydrolysis of AMP to form adenine and ribose 5-phosphate using water as the nucleophile;Dbxref=InterPro:IPR000845,InterPro:IPR011271,InterPro:IPR011633,UniProtKB%2FTrEMBL:Q0WEN3,Genbank:YP_002347255.1,GeneID:1175120;gbkey=CDS;gene=amn;product=AMP nucleosidase;protein_id=YP_002347255.1;transl_table=11
NC_003143.1	RefSeq	ribosome_entry_site	2569599	2569607	.	-	.	ID=id1618;gbkey=RBS
NC_003143.1	RefSeq	gene	2569831	2571234	.	+	.	ID=gene2208;Name=YPO2289;Dbxref=GeneID:1175121;gbkey=Gene;locus_tag=YPO2289
NC_003143.1	RefSeq	CDS	2569831	2571234	.	+	0	ID=cds2109;Name=YP_002347256.1;Parent=gene2208;Dbxref=UniProtKB%2FTrEMBL:Q0WEN2,Genbank:YP_002347256.1,GeneID:1175121;gbkey=CDS;product=virulence factor;protein_id=YP_002347256.1;transl_table=11
NC_003143.1	RefSeq	gene	2571239	2574310	.	+	.	ID=gene2209;Name=YPO2290;Dbxref=GeneID:1175122;gbkey=Gene;locus_tag=YPO2290
NC_003143.1	RefSeq	CDS	2571239	2574310	.	+	0	ID=cds2110;Name=YP_002347257.1;Parent=gene2209;Dbxref=InterPro:IPR009216,UniProtKB%2FTrEMBL:Q0WEN1,Genbank:YP_002347257.1,GeneID:1175122;gbkey=CDS;product=virulence factor;protein_id=YP_002347257.1;transl_table=11
NC_003143.1	RefSeq	region	2572895	2572918	.	+	.	ID=id1619;Note=PS00017 ATP%2FGTP-binding site motif A %28P-loop%29.;Dbxref=GeneID:1175122;gbkey=misc_feature
NC_003143.1	RefSeq	repeat_region	2573327	2573422	.	+	.	ID=id1620;Note=repeat region with 4.6xGTCATCACAACGACAAT repeat.;Dbxref=GeneID:1175122;gbkey=repeat_region
NC_003143.1	RefSeq	ribosome_entry_site	2574291	2574294	.	+	.	ID=id1621;Dbxref=GeneID:1175122;gbkey=RBS
NC_003143.1	RefSeq	gene	2574307	2576847	.	+	.	ID=gene2210;Name=YPO2291;Dbxref=GeneID:1175123;gbkey=Gene;locus_tag=YPO2291
NC_003143.1	RefSeq	CDS	2574307	2576847	.	+	0	ID=cds2111;Name=YP_002347258.1;Parent=gene2210;Dbxref=UniProtKB%2FTrEMBL:Q74TR7,Genbank:YP_002347258.1,GeneID:1175123;gbkey=CDS;product=virulence factor;protein_id=YP_002347258.1;transl_table=11
NC_003143.1	RefSeq	region	2574943	2575014	.	+	.	ID=id1622;Note=PS00334 Myb DNA-binding domain repeat signature 2.;Dbxref=GeneID:1175123;gbkey=misc_feature
NC_003143.1	RefSeq	gene	2577016	2577810	.	-	.	ID=gene2211;Name=YPO2292;Dbxref=GeneID:1175124;gbkey=Gene;locus_tag=YPO2292
NC_003143.1	RefSeq	CDS	2577016	2577810	.	-	0	ID=cds2112;Name=YP_002347259.1;Parent=gene2211;Dbxref=InterPro:IPR010846,UniProtKB%2FTrEMBL:Q0WEM9,Genbank:YP_002347259.1,GeneID:1175124;gbkey=CDS;product=lipoprotein;protein_id=YP_002347259.1;transl_table=11
NC_003143.1	RefSeq	region	2577763	2577795	.	-	.	ID=id1623;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site.;Dbxref=GeneID:1175124;gbkey=misc_feature
NC_003143.1	RefSeq	ribosome_entry_site	2577817	2577820	.	-	.	ID=id1624;gbkey=RBS
NC_003143.1	RefSeq	gene	2578383	2580065	.	+	.	ID=gene2212;Name=ilvB;Dbxref=GeneID:1175125;gbkey=Gene;gene=ilvB;locus_tag=YPO2293
NC_003143.1	RefSeq	CDS	2578383	2580065	.	+	0	ID=cds2113;Name=YP_002347260.1;Parent=gene2212;Dbxref=InterPro:IPR000399,InterPro:IPR011766,InterPro:IPR012000,InterPro:IPR012001,InterPro:IPR012846,UniProtKB%2FTrEMBL:Q7CIJ3,Genbank:YP_002347260.1,GeneID:1175125;gbkey=CDS;gene=ilvB;product=acetolactate synthase catalytic subunit;protein_id=YP_002347260.1;transl_table=11
NC_003143.1	RefSeq	region	2579652	2579711	.	+	.	ID=id1625;Note=PS00187 Thiamine pyrophosphate enzymes signature.;Dbxref=GeneID:1175125;gbkey=misc_feature;gene=ilvB
NC_003143.1	RefSeq	ribosome_entry_site	2580054	2580058	.	+	.	ID=id1626;Dbxref=GeneID:1175125;gbkey=RBS;gene=ilvB
NC_003143.1	RefSeq	gene	2580067	2580369	.	+	.	ID=gene2213;Name=ilvN;Dbxref=GeneID:1175126;gbkey=Gene;gene=ilvN;locus_tag=YPO2294
NC_003143.1	RefSeq	CDS	2580067	2580369	.	+	0	ID=cds2114;Name=YP_002347261.1;Parent=gene2213;Note=with IlvB catalyzes the formation of 2-acetolactate from pyruvate%2C the small subunit is required for full activity and valine sensitivity%3B E.coli produces 3 isoenzymes of acetolactate synthase which differ in specificity to substrates%2C valine sensitivity and affinity for cofactors%3B also known as acetolactate synthase small subunit;Dbxref=InterPro:IPR002912,InterPro:IPR004789,UniProtKB%2FTrEMBL:Q0WEM7,Genbank:YP_002347261.1,GeneID:1175126;gbkey=CDS;gene=ilvN;product=acetolactate synthase 1 regulatory subunit;protein_id=YP_002347261.1;transl_table=11
NC_003143.1	RefSeq	gene	2580436	2581110	.	-	.	ID=gene2214;Name=YPO2295;Dbxref=GeneID:1175127;gbkey=Gene;locus_tag=YPO2295
NC_003143.1	RefSeq	CDS	2580436	2581110	.	-	0	ID=cds2115;Name=YP_002347262.1;Parent=gene2214;Note=manganese-dependent 5%27-nucleotidase%3B specific for 5%27-UMP%2C 5%27-dUMP%2C and 5%27-dTMP%3B member of haloacid dehalogenase %28HAD%29-like hydrolase superfamily;Dbxref=InterPro:IPR000223,InterPro:IPR005833,InterPro:IPR005834,InterPro:IPR006402,InterPro:IPR006439,InterPro:IPR011951,UniProtKB%2FTrEMBL:Q7CIJ2,Genbank:YP_002347262.1,GeneID:1175127;gbkey=CDS;product=nucleotidase;protein_id=YP_002347262.1;transl_table=11
NC_003143.1	RefSeq	region	2580559	2580600	.	-	.	ID=id1627;Note=PS00761 Signal peptidases I signature 3.;Dbxref=GeneID:1175127;gbkey=misc_feature
NC_003143.1	RefSeq	gene	2581241	2583636	.	-	.	ID=gene2215;Name=YPO2296;Dbxref=GeneID:1175128;gbkey=Gene;locus_tag=YPO2296;pseudo=true
NC_003143.1	RefSeq	STS	2582682	2583344	.	+	.	ID=id1628;Dbxref=UniSTS:474273;gbkey=STS
NC_003143.1	RefSeq	gene	2584182	2585627	.	-	.	ID=gene2216;Name=phoA;Dbxref=GeneID:1175130;gbkey=Gene;gene=phoA;locus_tag=YPO2298
NC_003143.1	RefSeq	CDS	2584182	2585627	.	-	0	ID=cds2116;Name=YP_002347265.1;Parent=gene2216;Dbxref=InterPro:IPR001952,UniProtKB%2FTrEMBL:Q0WEM3,Genbank:YP_002347265.1,GeneID:1175130;gbkey=CDS;gene=phoA;product=alkaline phosphatase;protein_id=YP_002347265.1;transl_table=11
NC_003143.1	RefSeq	region	2585211	2585237	.	-	.	ID=id1629;Note=PS00123 Alkaline phosphatase active site.;Dbxref=GeneID:1175130;gbkey=misc_feature;gene=phoA
NC_003143.1	RefSeq	repeat_region	2585572	2585607	.	-	.	ID=id1630;Note=repeat region containing 2xGATAATGCTATGCCGGAT repeats.;Dbxref=GeneID:1175130;gbkey=repeat_region;gene=phoA
NC_003143.1	RefSeq	ribosome_entry_site	2585860	2585863	.	+	.	ID=id1631;gbkey=RBS
NC_003143.1	RefSeq	gene	2585868	2586386	.	+	.	ID=gene2217;Name=ogt;Dbxref=GeneID:1175131;gbkey=Gene;gene=ogt;locus_tag=YPO2299
NC_003143.1	RefSeq	CDS	2585868	2586386	.	+	0	ID=cds2117;Name=YP_002347266.1;Parent=gene2217;Dbxref=InterPro:IPR001497,InterPro:IPR008332,InterPro:IPR011991,UniProtKB%2FTrEMBL:Q7CIJ1,Genbank:YP_002347266.1,GeneID:1175131;gbkey=CDS;gene=ogt;product=methylated-DNA--protein-cysteine methyltransferase;protein_id=YP_002347266.1;transl_table=11
NC_003143.1	RefSeq	region	2586276	2586296	.	+	.	ID=id1632;Note=PS00374 Methylated-DNA--protein-cysteine methyltransferase active site.;Dbxref=GeneID:1175131;gbkey=misc_feature;gene=ogt
NC_003143.1	RefSeq	gene	2586459	2587211	.	+	.	ID=gene2218;Name=fnr;Dbxref=GeneID:1175132;gbkey=Gene;gene=fnr;gene_synonym=nirR;locus_tag=YPO2300
NC_003143.1	RefSeq	CDS	2586459	2587211	.	+	0	ID=cds2118;Name=YP_002347267.1;Parent=gene2218;Note=Global transcription factor that controls the expression of over 100 target genes in response to anoxia;Dbxref=InterPro:IPR000595,InterPro:IPR001808,InterPro:IPR011991,InterPro:IPR012318,UniProtKB%2FTrEMBL:Q0WEM1,Genbank:YP_002347267.1,GeneID:1175132;gbkey=CDS;gene=fnr;product=fumarate%2Fnitrate reduction transcriptional regulator;protein_id=YP_002347267.1;transl_table=11
NC_003143.1	RefSeq	region	2587041	2587112	.	+	.	ID=id1633;Note=PS00042 Bacterial regulatory proteins%2C crp family signature.;Dbxref=GeneID:1175132;gbkey=misc_feature;gene=fnr
NC_003143.1	RefSeq	region	2587041	2587106	.	+	.	ID=id1634;Note=Predicted helix-turn-helix motif with score 1841 %28%2B5.46 SD%29 at aa 195-216%2C sequence MTRGDIGNYLGLTVETISRLLG;Dbxref=GeneID:1175132;gbkey=misc_feature;gene=fnr
NC_003143.1	RefSeq	ribosome_entry_site	2587335	2587341	.	+	.	ID=id1635;gbkey=RBS
NC_003143.1	RefSeq	gene	2587346	2588302	.	+	.	ID=gene2219;Name=YPO2301;Dbxref=GeneID:1175133;gbkey=Gene;locus_tag=YPO2301
NC_003143.1	RefSeq	CDS	2587346	2588302	.	+	0	ID=cds2119;Name=YP_002347268.1;Parent=gene2219;Note=with UspC and UspD is involved in resistance to UV irradiation;Dbxref=InterPro:IPR006016,UniProtKB%2FTrEMBL:Q0WEM0,Genbank:YP_002347268.1,GeneID:1175133;gbkey=CDS;product=universal stress protein UspE;protein_id=YP_002347268.1;transl_table=11
NC_003143.1	RefSeq	gene	2588577	2589971	.	-	.	ID=gene2220;Name=pntB;Dbxref=GeneID:1175134;gbkey=Gene;gene=pntB;locus_tag=YPO2302
NC_003143.1	RefSeq	CDS	2588577	2589971	.	-	0	ID=cds2120;Name=YP_002347269.1;Parent=gene2220;Note=catalyzes reversible transfer of hydride ion equivalent between NAD and NADP%3B membrane-bound proton pump that translocates protons from cytosolic to periplasmic side of the inner membrane%3B forms a tetramer composed of two alpha and 2 beta subunits%3B AB-stereospecific enzyme;Dbxref=InterPro:IPR004003,InterPro:IPR012136,UniProtKB%2FTrEMBL:Q7CIJ0,Genbank:YP_002347269.1,GeneID:1175134;gbkey=CDS;gene=pntB;product=pyridine nucleotide transhydrogenase;protein_id=YP_002347269.1;transl_table=11
NC_003143.1	RefSeq	gene	2590044	2591570	.	-	.	ID=gene2221;Name=pntA;Dbxref=GeneID:1175135;gbkey=Gene;gene=pntA;locus_tag=YPO2303
NC_003143.1	RefSeq	CDS	2590044	2591570	.	-	0	ID=cds2121;Name=YP_002347270.1;Parent=gene2221;Note=forms a tetramer composed of 2 alpha subunits and 2 beta subunits in the inner membrane%3B involved in catalyzing transfer of hydride ion equivalents between NAD and NADP%3B stereospecific %28AB-specific%29%3B functions as a proton pump by translocating protons from cytoplasm to periplasm;Dbxref=InterPro:IPR004571,InterPro:IPR007698,InterPro:IPR007886,InterPro:IPR008142,InterPro:IPR008143,UniProtKB%2FTrEMBL:Q7CII9,Genbank:YP_002347270.1,GeneID:1175135;gbkey=CDS;gene=pntA;product=NAD%28P%29 transhydrogenase subunit alpha;protein_id=YP_002347270.1;transl_table=11
NC_003143.1	RefSeq	region	2590986	2591063	.	-	.	ID=id1636;Note=PS00837 Alanine dehydrogenase %26 pyridine nucleotide transhydrogenase signature 2.;Dbxref=GeneID:1175135;gbkey=misc_feature;gene=pntA
NC_003143.1	RefSeq	region	2591481	2591561	.	-	.	ID=id1637;Note=PS00836 Alanine dehydrogenase %26 pyridine nucleotide transhydrogenase signature 1.;Dbxref=GeneID:1175135;gbkey=misc_feature;gene=pntA
NC_003143.1	RefSeq	gene	2591691	2591894	.	-	.	ID=gene2222;Name=YPO2304;Dbxref=GeneID:1175136;gbkey=Gene;locus_tag=YPO2304
NC_003143.1	RefSeq	CDS	2591691	2591894	.	-	0	ID=cds2122;Name=YP_002347271.1;Parent=gene2222;Note=No significant database hits;Dbxref=UniProtKB%2FTrEMBL:Q74TQ7,Genbank:YP_002347271.1,GeneID:1175136;gbkey=CDS;product=hypothetical protein;protein_id=YP_002347271.1;transl_table=11
NC_003143.1	RefSeq	gene	2592100	2593053	.	+	.	ID=gene2223;Name=YPO2305;Dbxref=GeneID:1175137;gbkey=Gene;locus_tag=YPO2305
NC_003143.1	RefSeq	CDS	2592100	2593053	.	+	0	ID=cds2123;Name=YP_002347272.1;Parent=gene2223;Dbxref=InterPro:IPR010854,UniProtKB%2FTrEMBL:Q7CII8,Genbank:YP_002347272.1,GeneID:1175137;gbkey=CDS;product=hypothetical protein;protein_id=YP_002347272.1;transl_table=11
NC_003143.1	RefSeq	gene	2593323	2594714	.	+	.	ID=gene2224;Name=YPO2306;Dbxref=GeneID:1175138;gbkey=Gene;locus_tag=YPO2306
NC_003143.1	RefSeq	CDS	2593323	2594714	.	+	0	ID=cds2124;Name=YP_002347273.1;Parent=gene2224;Dbxref=InterPro:IPR002293,InterPro:IPR004754,InterPro:IPR004841,UniProtKB%2FTrEMBL:Q7CII7,Genbank:YP_002347273.1,GeneID:1175138;gbkey=CDS;product=amino acid antiporter;protein_id=YP_002347273.1;transl_table=11
NC_003143.1	RefSeq	gene	2594738	2595154	.	-	.	ID=gene2225;Name=YPO2307;Dbxref=GeneID:1175139;gbkey=Gene;locus_tag=YPO2307
NC_003143.1	RefSeq	CDS	2594738	2595154	.	-	0	ID=cds2125;Name=YP_002347274.1;Parent=gene2225;Dbxref=UniProtKB%2FTrEMBL:Q7CII6,Genbank:YP_002347274.1,GeneID:1175139;gbkey=CDS;product=hypothetical protein;protein_id=YP_002347274.1;transl_table=11
NC_003143.1	RefSeq	ribosome_entry_site	2595162	2595166	.	-	.	ID=id1638;gbkey=RBS
NC_003143.1	RefSeq	gene	2595451	2596197	.	+	.	ID=gene2226;Name=rstA;Dbxref=GeneID:1175140;gbkey=Gene;gene=rstA;gene_synonym=urpT;locus_tag=YPO2308
NC_003143.1	RefSeq	CDS	2595451	2596197	.	+	0	ID=cds2126;Name=YP_002347275.1;Parent=gene2226;Note=response regulator in two-component regulatory system with RstB;Dbxref=InterPro:IPR001789,InterPro:IPR001867,InterPro:IPR011006,InterPro:IPR011991,UniProtKB%2FTrEMBL:Q0WEL3,Genbank:YP_002347275.1,GeneID:1175140;gbkey=CDS;gene=rstA;product=DNA-binding transcriptional regulator RstA;protein_id=YP_002347275.1;transl_table=11
NC_003143.1	RefSeq	gene	2596225	2597502	.	+	.	ID=gene2227;Name=rstB;Dbxref=GeneID:1175141;gbkey=Gene;gene=rstB;gene_synonym=uspT;locus_tag=YPO2309
NC_003143.1	RefSeq	CDS	2596225	2597502	.	+	0	ID=cds2127;Name=YP_002347276.1;Parent=gene2227;Dbxref=InterPro:IPR003594,InterPro:IPR003660,InterPro:IPR003661,InterPro:IPR004358,InterPro:IPR005467,InterPro:IPR009082,UniProtKB%2FTrEMBL:Q0WEL2,Genbank:YP_002347276.1,GeneID:1175141;gbkey=CDS;gene=rstB;product=sensor protein RstB;protein_id=YP_002347276.1;transl_table=11
NC_003143.1	RefSeq	ribosome_entry_site	2597586	2597589	.	+	.	ID=id1639;gbkey=RBS
NC_003143.1	RefSeq	gene	2597596	2599095	.	+	.	ID=gene2228;Name=YPO2310;Dbxref=GeneID:1175142;gbkey=Gene;locus_tag=YPO2310
NC_003143.1	RefSeq	CDS	2597596	2599095	.	+	0	ID=cds2128;Name=YP_002347277.1;Parent=gene2228;Dbxref=InterPro:IPR001333,UniProtKB%2FTrEMBL:Q7CII5,Genbank:YP_002347277.1,GeneID:1175142;gbkey=CDS;product=carboxypeptidase;protein_id=YP_002347277.1;transl_table=11
NC_003143.1	RefSeq	repeat_region	2599109	2599820	.	-	.	ID=id1640;Note=Contains a %27A%27 at nucleotide position 315%7EIS200-like insertion sequence:IS1541;gbkey=repeat_region
NC_003143.1	RefSeq	gene	2599217	2599675	.	-	.	ID=gene2229;Name=tnp;Dbxref=GeneID:1175143;gbkey=Gene;gene=tnp;locus_tag=YPO2311
NC_003143.1	RefSeq	CDS	2599217	2599675	.	-	0	ID=cds2129;Name=YP_002347278.1;Parent=gene2229;Dbxref=InterPro:IPR002686,UniProtKB%2FTrEMBL:Q56938,Genbank:YP_002347278.1,GeneID:1175143;gbkey=CDS;gene=tnp;product=transposase for the IS1541 insertion element;protein_id=YP_002347278.1;transl_table=11
NC_003143.1	RefSeq	ribosome_entry_site	2600633	2600638	.	+	.	ID=id1641;gbkey=RBS
NC_003143.1	RefSeq	gene	2600645	2603269	.	+	.	ID=gene2230;Name=YPO2312;Dbxref=GeneID:1175144;gbkey=Gene;locus_tag=YPO2312
NC_003143.1	RefSeq	CDS	2600645	2603269	.	+	0	ID=cds2130;Name=YP_002347279.1;Parent=gene2230;Dbxref=InterPro:IPR005165,InterPro:IPR006530,UniProtKB%2FTrEMBL:Q7CIN8,Genbank:YP_002347279.1,GeneID:1175144;gbkey=CDS;product=insecticidal toxin complex;protein_id=YP_002347279.1;transl_table=11
NC_003143.1	RefSeq	gene	2603272	2603628	.	+	.	ID=gene2231;Name=YPO2313;Dbxref=GeneID:1175145;gbkey=Gene;locus_tag=YPO2313
NC_003143.1	RefSeq	CDS	2603272	2603628	.	+	0	ID=cds2131;Name=YP_002347280.1;Parent=gene2231;Note=No significant database hits;Dbxref=UniProtKB%2FTrEMBL:Q7CIN9,Genbank:YP_002347280.1,GeneID:1175145;gbkey=CDS;product=hypothetical protein;protein_id=YP_002347280.1;transl_table=11
NC_003143.1	RefSeq	gene	2604455	2605033	.	-	.	ID=gene2232;Name=YPO2315;Dbxref=GeneID:1175147;gbkey=Gene;locus_tag=YPO2315
NC_003143.1	RefSeq	CDS	2604455	2605033	.	-	0	ID=cds2132;Name=YP_002347282.1;Parent=gene2232;Dbxref=InterPro:IPR007372,UniProtKB%2FTrEMBL:Q0WEK6,Genbank:YP_002347282.1,GeneID:1175147;gbkey=CDS;product=hypothetical protein;protein_id=YP_002347282.1;transl_table=11
NC_003143.1	RefSeq	ribosome_entry_site	2605042	2605045	.	-	.	ID=id1642;gbkey=RBS
NC_003143.1	RefSeq	gene	2605059	2605613	.	-	.	ID=gene2233;Name=YPO2316;Dbxref=GeneID:1175148;gbkey=Gene;locus_tag=YPO2316
NC_003143.1	RefSeq	CDS	2605059	2605613	.	-	0	ID=cds2133;Name=YP_002347283.1;Parent=gene2233;Dbxref=InterPro:IPR011577,UniProtKB%2FTrEMBL:Q74TP6,Genbank:YP_002347283.1,GeneID:1175148;gbkey=CDS;product=hypothetical protein;protein_id=YP_002347283.1;transl_table=11
NC_003143.1	RefSeq	gene	2606008	2606220	.	+	.	ID=gene2234;Name=YPO2317;Dbxref=GeneID:1175149;gbkey=Gene;locus_tag=YPO2317
NC_003143.1	RefSeq	CDS	2606008	2606220	.	+	0	ID=cds2134;Name=YP_002347284.1;Parent=gene2234;Note=No significant database hits. Doubtful CDS;Dbxref=UniProtKB%2FTrEMBL:Q74TP5,Genbank:YP_002347284.1,GeneID:1175149;gbkey=CDS;product=hypothetical protein;protein_id=YP_002347284.1;transl_table=11
NC_003143.1	RefSeq	ribosome_entry_site	2606205	2606208	.	+	.	ID=id1643;Dbxref=GeneID:1175149;gbkey=RBS
NC_003143.1	RefSeq	gene	2606217	2606501	.	+	.	ID=gene2235;Name=asr;Dbxref=GeneID:1175150;gbkey=Gene;gene=asr;locus_tag=YPO2318
NC_003143.1	RefSeq	CDS	2606217	2606501	.	+	0	ID=cds2135;Name=YP_002347285.1;Parent=gene2235;Dbxref=UniProtKB%2FTrEMBL:Q0WEK3,Genbank:YP_002347285.1,GeneID:1175150;gbkey=CDS;gene=asr;product=acid shock protein;protein_id=YP_002347285.1;transl_table=11
NC_003143.1	RefSeq	gene	2606835	2607671	.	+	.	ID=gene2236;Name=YPO2319;Dbxref=GeneID:1175151;gbkey=Gene;locus_tag=YPO2319
NC_003143.1	RefSeq	CDS	2606835	2607671	.	+	0	ID=cds2136;Name=YP_002347286.1;Parent=gene2236;Dbxref=InterPro:IPR001254,InterPro:IPR001314,InterPro:IPR008256,InterPro:IPR009003,UniProtKB%2FTrEMBL:Q7CIP0,Genbank:YP_002347286.1,GeneID:1175151;gbkey=CDS;product=pepetidase;protein_id=YP_002347286.1;transl_table=11
NC_003143.1	RefSeq	region	2607069	2607086	.	+	.	ID=id1644;Note=PS00134 Serine proteases%2C trypsin family%2C histidine active site.;Dbxref=GeneID:1175151;gbkey=misc_feature
NC_003143.1	RefSeq	region	2607480	2607515	.	+	.	ID=id1645;Note=PS00135 Serine proteases%2C trypsin family%2C serine active site.;Dbxref=GeneID:1175151;gbkey=misc_feature
NC_003143.1	RefSeq	gene	2607727	2608050	.	-	.	ID=gene2237;Name=YPO2320;Dbxref=GeneID:1175152;gbkey=Gene;locus_tag=YPO2320
NC_003143.1	RefSeq	CDS	2607727	2608050	.	-	0	ID=cds2137;Name=YP_002347287.1;Parent=gene2237;Dbxref=InterPro:IPR001387,InterPro:IPR010982,UniProtKB%2FTrEMBL:Q7CIP1,Genbank:YP_002347287.1,GeneID:1175152;gbkey=CDS;product=DNA-binding phage-related protein;protein_id=YP_002347287.1;transl_table=11
NC_003143.1	RefSeq	region	2607835	2607900	.	-	.	ID=id1646;Note=Predicted helix-turn-helix motif with score 1771 %28%2B5.22 SD%29 at aa 51-72%2C sequence LTQEEVALRAGLKKQNISRMEK;Dbxref=GeneID:1175152;gbkey=misc_feature
NC_003143.1	RefSeq	gene	2608047	2608361	.	-	.	ID=gene2238;Name=YPO2321;Dbxref=GeneID:1175153;gbkey=Gene;locus_tag=YPO2321
NC_003143.1	RefSeq	CDS	2608047	2608361	.	-	0	ID=cds2138;Name=YP_002347288.1;Parent=gene2238;Dbxref=InterPro:IPR009241,UniProtKB%2FTrEMBL:Q0WEK0,Genbank:YP_002347288.1,GeneID:1175153;gbkey=CDS;product=hypothetical protein;protein_id=YP_002347288.1;transl_table=11
NC_003143.1	RefSeq	ribosome_entry_site	2608060	2608063	.	-	.	ID=id1647;Dbxref=GeneID:1175153;gbkey=RBS
NC_003143.1	RefSeq	gene	2608715	2612557	.	-	.	ID=gene2239;Name=hrpA;Dbxref=GeneID:1175154;gbkey=Gene;gene=hrpA;locus_tag=YPO2322
NC_003143.1	RefSeq	CDS	2608715	2612557	.	-	0	ID=cds2139;Name=YP_002347289.1;Parent=gene2239;Note=involved in the post-transcriptional processing of the daa operon mRNA%2C which encodes proteins involved in fimbrial biogenesis of an enteropathogenic E. coli strain;Dbxref=InterPro:IPR001650,InterPro:IPR003593,InterPro:IPR007502,InterPro:IPR010222,InterPro:IPR011709,InterPro:IPR014001,InterPro:IPR014021,UniProtKB%2FTrEMBL:Q0WEJ9,Genbank:YP_002347289.1,GeneID:1175154;gbkey=CDS;gene=hrpA;product=ATP-dependent RNA helicase HrpA;protein_id=YP_002347289.1;transl_table=11
NC_003143.1	RefSeq	region	2612294	2612317	.	-	.	ID=id1648;Note=PS00017 ATP%2FGTP-binding site motif A %28P-loop%29.;Dbxref=GeneID:1175154;gbkey=misc_feature;gene=hrpA
NC_003143.1	RefSeq	gene	2613025	2613630	.	+	.	ID=gene2240;Name=acpD;Dbxref=GeneID:1175155;gbkey=Gene;gene=acpD;locus_tag=YPO2323
NC_003143.1	RefSeq	CDS	2613025	2613630	.	+	0	ID=cds2140;Name=YP_002347290.1;Parent=gene2240;Note=FMN-dependent%3B requires NADH%3B catalyzes the cleavage of azo bond in aromatic azo compounds;Dbxref=InterPro:IPR003680,UniProtKB%2FTrEMBL:Q0WEJ8,Genbank:YP_002347290.1,GeneID:1175155;gbkey=CDS;gene=acpD;product=azoreductase;protein_id=YP_002347290.1;transl_table=11
NC_003143.1	RefSeq	gene	2613751	2614707	.	-	.	ID=gene2241;Name=YPO2324;Dbxref=GeneID:1175156;gbkey=Gene;locus_tag=YPO2324
NC_003143.1	RefSeq	CDS	2613751	2614707	.	-	0	ID=cds2141;Name=YP_002347291.1;Parent=gene2241;Dbxref=InterPro:IPR007324,InterPro:IPR009057,UniProtKB%2FTrEMBL:Q7CIP2,Genbank:YP_002347291.1,GeneID:1175156;gbkey=CDS;product=transcriptional regulator;protein_id=YP_002347291.1;transl_table=11
NC_003143.1	RefSeq	region	2614576	2614641	.	-	.	ID=id1649;Note=Predicted helix-turn-helix motif with score 1655 %28%2B4.82 SD%29 at aa 23-44%2C sequence QTQHEIAEALGVSRQVAQRLVA;Dbxref=GeneID:1175156;gbkey=misc_feature
NC_003143.1	RefSeq	ribosome_entry_site	2614907	2614910	.	+	.	ID=id1650;gbkey=RBS
NC_003143.1	RefSeq	gene	2614917	2616308	.	+	.	ID=gene2242;Name=dalD;Dbxref=GeneID:1175157;gbkey=Gene;gene=dalD;locus_tag=YPO2325
NC_003143.1	RefSeq	CDS	2614917	2616308	.	+	0	ID=cds2142;Name=YP_002347292.1;Parent=gene2242;Dbxref=InterPro:IPR000669,InterPro:IPR008927,InterPro:IPR013118,InterPro:IPR013131,UniProtKB%2FTrEMBL:Q0WEJ6,Genbank:YP_002347292.1,GeneID:1175157;gbkey=CDS;gene=dalD;product=mannitol dehydrogenase;protein_id=YP_002347292.1;transl_table=11
NC_003143.1	RefSeq	gene	2616509	2616880	.	-	.	ID=gene2243;Name=YPO2326;Dbxref=GeneID:1175158;gbkey=Gene;locus_tag=YPO2326
NC_003143.1	RefSeq	CDS	2616509	2616880	.	-	0	ID=cds2143;Name=YP_002347293.1;Parent=gene2243;Dbxref=InterPro:IPR008309,UniProtKB%2FTrEMBL:Q7CIP3,Genbank:YP_002347293.1,GeneID:1175158;gbkey=CDS;product=hypothetical protein;protein_id=YP_002347293.1;transl_table=11
NC_003143.1	RefSeq	ribosome_entry_site	2616887	2616891	.	-	.	ID=id1651;gbkey=RBS
NC_003143.1	RefSeq	gene	2616890	2617075	.	-	.	ID=gene2244;Name=YPO2327;Dbxref=GeneID:1175159;gbkey=Gene;locus_tag=YPO2327
NC_003143.1	RefSeq	CDS	2616890	2617075	.	-	0	ID=cds2144;Name=YP_002347294.1;Parent=gene2244;Dbxref=UniProtKB%2FTrEMBL:Q0WEJ4,Genbank:YP_002347294.1,GeneID:1175159;gbkey=CDS;product=lipoprotein;protein_id=YP_002347294.1;transl_table=11
NC_003143.1	RefSeq	region	2617022	2617054	.	-	.	ID=id1652;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site.;Dbxref=GeneID:1175159;gbkey=misc_feature
NC_003143.1	RefSeq	gene	2617081	2619777	.	-	.	ID=gene2245;Name=YPO2328;Dbxref=GeneID:1175160;gbkey=Gene;locus_tag=YPO2328
NC_003143.1	RefSeq	CDS	2617081	2619777	.	-	0	ID=cds2145;Name=YP_002347295.1;Parent=gene2245;Dbxref=InterPro:IPR002086,UniProtKB%2FTrEMBL:Q0WEJ3,Genbank:YP_002347295.1,GeneID:1175160;gbkey=CDS;product=hypothetical protein;protein_id=YP_002347295.1;transl_table=11
NC_003143.1	RefSeq	ribosome_entry_site	2617085	2617089	.	-	.	ID=id1653;Dbxref=GeneID:1175160;gbkey=RBS
NC_003143.1	RefSeq	repeat_region	2617144	2617179	.	-	.	ID=id1654;Note=2x amino acid repeat SLPSAS;Dbxref=GeneID:1175160;gbkey=repeat_region
NC_003143.1	RefSeq	region	2617861	2617884	.	-	.	ID=id1655;Note=PS00687 Aldehyde dehydrogenases glutamic acid active site.;Dbxref=GeneID:1175160;gbkey=misc_feature
NC_003143.1	RefSeq	region	2619691	2619756	.	-	.	ID=id1656;Note=1 probable transmembrane helix predicted;Dbxref=GeneID:1175160;gbkey=misc_feature
NC_003143.1	RefSeq	ribosome_entry_site	2620032	2620035	.	+	.	ID=id1657;gbkey=RBS
NC_003143.1	RefSeq	gene	2620043	2621035	.	+	.	ID=gene2246;Name=hslI;Dbxref=GeneID:1175161;gbkey=Gene;gene=hslI;gene_synonym=htpH,ldhA;locus_tag=YPO2329
NC_003143.1	RefSeq	CDS	2620043	2621035	.	+	0	ID=cds2146;Name=YP_002347296.1;Parent=gene2246;Dbxref=InterPro:IPR006139,InterPro:IPR006140,UniProtKB%2FTrEMBL:Q0WEJ2,Genbank:YP_002347296.1,GeneID:1175161;gbkey=CDS;gene=hslI;product=D-lactate dehydrogenase;protein_id=YP_002347296.1;transl_table=11
NC_003143.1	RefSeq	region	2620481	2620564	.	+	.	ID=id1658;Note=PS00065 D-isomer specific 2-hydroxyacid dehydrogenases NAD-binding signature.;Dbxref=GeneID:1175161;gbkey=misc_feature;gene=hslI
NC_003143.1	RefSeq	region	2620622	2620690	.	+	.	ID=id1659;Note=PS00670 D-isomer specific 2-hydroxyacid dehydrogenases signature 2.;Dbxref=GeneID:1175161;gbkey=misc_feature;gene=hslI
NC_003143.1	RefSeq	region	2620709	2620759	.	+	.	ID=id1660;Note=PS00671 D-isomer specific 2-hydroxyacid dehydrogenases signature 3.;Dbxref=GeneID:1175161;gbkey=misc_feature;gene=hslI
NC_003143.1	RefSeq	gene	2621105	2621557	.	+	.	ID=gene2247;Name=hslJ;Dbxref=GeneID:1175162;gbkey=Gene;gene=hslJ;locus_tag=YPO2330
NC_003143.1	RefSeq	CDS	2621105	2621557	.	+	0	ID=cds2147;Name=YP_002347297.1;Parent=gene2247;Dbxref=InterPro:IPR005184,UniProtKB%2FTrEMBL:Q7CIP4,Genbank:YP_002347297.1,GeneID:1175162;gbkey=CDS;gene=hslJ;product=heat-inducible protein;protein_id=YP_002347297.1;transl_table=11
NC_003143.1	RefSeq	region	2621123	2621155	.	+	.	ID=id1661;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site.;Dbxref=GeneID:1175162;gbkey=misc_feature;gene=hslJ
NC_003143.1	RefSeq	gene	2621615	2621956	.	-	.	ID=gene2248;Name=YPO2331;Dbxref=GeneID:1175163;gbkey=Gene;locus_tag=YPO2331
NC_003143.1	RefSeq	CDS	2621615	2621956	.	-	0	ID=cds2148;Name=YP_002347298.1;Parent=gene2248;Dbxref=UniProtKB%2FTrEMBL:Q0WEJ0,Genbank:YP_002347298.1,GeneID:1175163;gbkey=CDS;product=lipoprotein;protein_id=YP_002347298.1;transl_table=11
NC_003143.1	RefSeq	region	2621618	2621629	.	-	.	ID=id1662;Note=PS00294 Prenyl group binding site %28CAAX box%29.;Dbxref=GeneID:1175163;gbkey=misc_feature
NC_003143.1	RefSeq	repeat_region	2621759	2621794	.	-	.	ID=id1663;Note=2x repeat: VNMSN%28D%2FS%29;Dbxref=GeneID:1175163;gbkey=repeat_region
NC_003143.1	RefSeq	repeat_region	2621846	2621881	.	-	.	ID=id1664;Note=2x repeat: NTLNNS;Dbxref=GeneID:1175163;gbkey=repeat_region
NC_003143.1	RefSeq	region	2621903	2621935	.	-	.	ID=id1665;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site.;Dbxref=GeneID:1175163;gbkey=misc_feature
NC_003143.1	RefSeq	gene	2622241	2622900	.	+	.	ID=gene2249;Name=YPO2332;Dbxref=GeneID:1175164;gbkey=Gene;locus_tag=YPO2332
NC_003143.1	RefSeq	CDS	2622241	2622900	.	+	0	ID=cds2149;Name=YP_002347299.1;Parent=gene2249;Note=inner membrane protein involved in cell density-dependent acid resistance%3B part of the acid fitness island %28AFI%29 of E. coli;Dbxref=InterPro:IPR003416,UniProtKB%2FTrEMBL:Q7CIP5,Genbank:YP_002347299.1,GeneID:1175164;gbkey=CDS;product=Mg%282%2B%29 transport ATPase;protein_id=YP_002347299.1;transl_table=11
NC_003143.1	RefSeq	gene	2622960	2623298	.	-	.	ID=gene2250;Name=qacE;Dbxref=GeneID:1175165;gbkey=Gene;gene=qacE;locus_tag=YPO2333
NC_003143.1	RefSeq	CDS	2622960	2623298	.	-	0	ID=cds2150;Name=YP_002347300.1;Parent=gene2250;Dbxref=InterPro:IPR000390,UniProtKB%2FTrEMBL:Q7CIP6,Genbank:YP_002347300.1,GeneID:1175165;gbkey=CDS;gene=qacE;product=quaternary ammonium compound-resistance protein;protein_id=YP_002347300.1;transl_table=11
NC_003143.1	RefSeq	gene	2623771	2627304	.	+	.	ID=gene2251;Name=nifJ;Dbxref=GeneID:1175166;gbkey=Gene;gene=nifJ;locus_tag=YPO2334
NC_003143.1	RefSeq	CDS	2623771	2627304	.	+	0	ID=cds2151;Name=YP_002347301.1;Parent=gene2251;Dbxref=InterPro:IPR000585,InterPro:IPR001450,InterPro:IPR002869,InterPro:IPR002880,InterPro:IPR009014,InterPro:IPR011766,InterPro:IPR011895,UniProtKB%2FTrEMBL:Q7CIP7,Genbank:YP_002347301.1,GeneID:1175166;gbkey=CDS;gene=nifJ;product=pyruvate-flavodoxin oxidoreductase;protein_id=YP_002347301.1;transl_table=11
NC_003143.1	RefSeq	region	2625322	2625369	.	+	.	ID=id1666;Note=PS00024 Hemopexin domain signature.;Dbxref=GeneID:1175166;gbkey=misc_feature;gene=nifJ
NC_003143.1	RefSeq	region	2625835	2625870	.	+	.	ID=id1667;Note=PS00198 4Fe-4S ferredoxins%2C iron-sulfur binding region signature.;Dbxref=GeneID:1175166;gbkey=misc_feature;gene=nifJ
NC_003143.1	RefSeq	region	2626003	2626038	.	+	.	ID=id1668;Note=PS00198 4Fe-4S ferredoxins%2C iron-sulfur binding region signature.;Dbxref=GeneID:1175166;gbkey=misc_feature;gene=nifJ
NC_003143.1	RefSeq	gene	2627579	2628520	.	+	.	ID=gene2252;Name=YPO2335;Dbxref=GeneID:1175167;gbkey=Gene;locus_tag=YPO2335
NC_003143.1	RefSeq	CDS	2627579	2628520	.	+	0	ID=cds2152;Name=YP_002347302.1;Parent=gene2252;Note=TtcA%3B YdaO%3B catalyzes the thiolation of cytosine 32 in specific tRNAs;Dbxref=InterPro:IPR011063,InterPro:IPR012089,UniProtKB%2FTrEMBL:Q7CIP8,Genbank:YP_002347302.1,GeneID:1175167;gbkey=CDS;product=C32 tRNA thiolase;protein_id=YP_002347302.1;transl_table=11
NC_003143.1	RefSeq	ribosome_entry_site	2628778	2628781	.	+	.	ID=id1669;gbkey=RBS
NC_003143.1	RefSeq	gene	2628791	2629795	.	+	.	ID=gene2253;Name=YPO2336;Dbxref=GeneID:1175168;gbkey=Gene;locus_tag=YPO2336
NC_003143.1	RefSeq	CDS	2628791	2629795	.	+	0	ID=cds2153;Name=YP_002347303.1;Parent=gene2253;Dbxref=InterPro:IPR013094,UniProtKB%2FTrEMBL:Q0WEI5,Genbank:YP_002347303.1,GeneID:1175168;gbkey=CDS;product=hypothetical protein;protein_id=YP_002347303.1;transl_table=11
NC_003143.1	RefSeq	gene	2630107	2630946	.	+	.	ID=gene2254;Name=YPO2337;Dbxref=GeneID:1175169;gbkey=Gene;locus_tag=YPO2337
NC_003143.1	RefSeq	CDS	2630107	2630946	.	+	0	ID=cds2154;Name=YP_002347304.1;Parent=gene2254;Dbxref=InterPro:IPR000551,InterPro:IPR009061,UniProtKB%2FTrEMBL:Q7CIP9,Genbank:YP_002347304.1,GeneID:1175169;gbkey=CDS;product=regulatory protein;protein_id=YP_002347304.1;transl_table=11
NC_003143.1	RefSeq	gene	2631320	2632303	.	-	.	ID=gene2255;Name=zntB;Dbxref=GeneID:1175170;gbkey=Gene;gene=zntB;locus_tag=YPO2338
NC_003143.1	RefSeq	CDS	2631320	2632303	.	-	0	ID=cds2155;Name=YP_002347305.1;Parent=gene2255;Dbxref=InterPro:IPR002523,UniProtKB%2FTrEMBL:Q0WEI3,Genbank:YP_002347305.1,GeneID:1175170;gbkey=CDS;gene=zntB;product=zinc transporter;protein_id=YP_002347305.1;transl_table=11
NC_003143.1	RefSeq	gene	2632546	2634162	.	-	.	ID=gene2256;Name=mppA;Dbxref=GeneID:1175171;gbkey=Gene;gene=mppA;locus_tag=YPO2339
NC_003143.1	RefSeq	CDS	2632546	2634162	.	-	0	ID=cds2156;Name=YP_002347306.1;Parent=gene2256;Dbxref=InterPro:IPR000914,UniProtKB%2FTrEMBL:Q7CIQ0,Genbank:YP_002347306.1,GeneID:1175171;gbkey=CDS;gene=mppA;product=periplasmic murein peptide-binding protein;protein_id=YP_002347306.1;transl_table=11
NC_003143.1	RefSeq	region	2633851	2633916	.	-	.	ID=id1670;Note=PS01040 Bacterial extracellular solute-binding proteins%2C family 5 signature.;Dbxref=GeneID:1175171;gbkey=misc_feature;gene=mppA
NC_003143.1	RefSeq	gene	2634540	2635310	.	+	.	ID=gene2257;Name=YPO2340;Dbxref=GeneID:1175172;gbkey=Gene;locus_tag=YPO2340
NC_003143.1	RefSeq	CDS	2634540	2635310	.	+	0	ID=cds2157;Name=YP_002347307.1;Parent=gene2257;Dbxref=InterPro:IPR000834,UniProtKB%2FTrEMBL:Q7CIQ1,Genbank:YP_002347307.1,GeneID:1175172;gbkey=CDS;product=murein peptide amidase A;protein_id=YP_002347307.1;transl_table=11
NC_003143.1	RefSeq	gene	2635352	2636326	.	-	.	ID=gene2258;Name=YPO2341;Dbxref=GeneID:1175173;gbkey=Gene;locus_tag=YPO2341
NC_003143.1	RefSeq	CDS	2635352	2636326	.	-	0	ID=cds2158;Name=YP_002347308.1;Parent=gene2258;Dbxref=InterPro:IPR001354,InterPro:IPR013341,UniProtKB%2FTrEMBL:Q7CIQ2,Genbank:YP_002347308.1,GeneID:1175173;gbkey=CDS;product=mandelate racemase;protein_id=YP_002347308.1;transl_table=11
NC_003143.1	RefSeq	region	2635715	2635810	.	-	.	ID=id1671;Note=PS00909 Mandelate racemase %2F muconate lactonizing enzyme family signature 2.;Dbxref=GeneID:1175173;gbkey=misc_feature
NC_003143.1	RefSeq	ribosome_entry_site	2636332	2636337	.	-	.	ID=id1672;gbkey=RBS
NC_003143.1	RefSeq	gene	2636489	2636992	.	+	.	ID=gene2259;Name=tpx;Dbxref=GeneID:1175174;gbkey=Gene;gene=tpx;locus_tag=YPO2342
NC_003143.1	RefSeq	CDS	2636489	2636992	.	+	0	ID=cds2159;Name=YP_002347309.1;Parent=gene2259;Note=antioxidant activity%3B thioredoxin-dependent thiol peroxidase%3B forms homodimers in solution%3B shows substrate specificity to alkyl hydroperoxides%3B periplasmic protein;Dbxref=InterPro:IPR002065,InterPro:IPR012335,InterPro:IPR012336,InterPro:IPR013740,UniProtKB%2FTrEMBL:Q0WEH9,Genbank:YP_002347309.1,GeneID:1175174;gbkey=CDS;gene=tpx;product=thiol peroxidase;protein_id=YP_002347309.1;transl_table=11
NC_003143.1	RefSeq	region	2636738	2636773	.	+	.	ID=id1673;Note=PS01265 Tpx family signature.;Dbxref=GeneID:1175174;gbkey=misc_feature;gene=tpx
NC_003143.1	RefSeq	repeat_region	2637100	2637811	.	+	.	ID=id1674;Note=Contains a %27G%27 at nucleotide position 315%7EIS200-like insertion sequence:IS1541;gbkey=repeat_region
NC_003143.1	RefSeq	gene	2637245	2637703	.	+	.	ID=gene2260;Name=tnp;Dbxref=GeneID:1175175;gbkey=Gene;gene=tnp;locus_tag=YPO2343
NC_003143.1	RefSeq	CDS	2637245	2637703	.	+	0	ID=cds2160;Name=YP_002347310.1;Parent=gene2260;Dbxref=InterPro:IPR002686,UniProtKB%2FTrEMBL:Q74YM6,Genbank:YP_002347310.1,GeneID:1175175;gbkey=CDS;gene=tnp;product=transposase for the IS1541 insertion element;protein_id=YP_002347310.1;transl_table=11
NC_003143.1	RefSeq	gene	2637850	2639427	.	-	.	ID=gene2261;Name=tyrR;Dbxref=GeneID:1175176;gbkey=Gene;gene=tyrR;locus_tag=YPO2344
NC_003143.1	RefSeq	CDS	2637850	2639427	.	-	0	ID=cds2161;Name=YP_002347311.1;Parent=gene2261;Note=regulates genes involved in the biosynthesis and transport of aromatic amino acids;Dbxref=InterPro:IPR000014,InterPro:IPR002078,InterPro:IPR002912,InterPro:IPR003593,InterPro:IPR009057,InterPro:IPR012287,InterPro:IPR013767,UniProtKB%2FTrEMBL:Q0WEH7,Genbank:YP_002347311.1,GeneID:1175176;gbkey=CDS;gene=tyrR;product=DNA-binding transcriptional regulator TyrR;protein_id=YP_002347311.1;transl_table=11
NC_003143.1	RefSeq	region	2637904	2637969	.	-	.	ID=id1675;Note=Predicted helix-turn-helix motif with score 1684 %28%2B4.92 SD%29 at aa 487-508%2C sequence PSTRKLAKRLGVSHTAIANKLR;Dbxref=GeneID:1175176;gbkey=misc_feature;gene=tyrR
NC_003143.1	RefSeq	region	2638144	2638173	.	-	.	ID=id1676;Note=PS00688 Sigma-54 interaction domain C-terminal part signature.;Dbxref=GeneID:1175176;gbkey=misc_feature;gene=tyrR
NC_003143.1	RefSeq	region	2638507	2638554	.	-	.	ID=id1677;Note=PS00676 Sigma-54 interaction domain ATP-binding region B signature.;Dbxref=GeneID:1175176;gbkey=misc_feature;gene=tyrR
NC_003143.1	RefSeq	region	2638699	2638740	.	-	.	ID=id1678;Note=PS00675 Sigma-54 interaction domain ATP-binding region A signature.;Dbxref=GeneID:1175176;gbkey=misc_feature;gene=tyrR
NC_003143.1	RefSeq	ribosome_entry_site	2639752	2639758	.	+	.	ID=id1679;gbkey=RBS
NC_003143.1	RefSeq	gene	2639762	2640208	.	+	.	ID=gene2262;Name=YPO2345;Dbxref=GeneID:1175177;gbkey=Gene;locus_tag=YPO2345
NC_003143.1	RefSeq	CDS	2639762	2640208	.	+	0	ID=cds2162;Name=YP_002347312.1;Parent=gene2262;Dbxref=InterPro:IPR011979,UniProtKB%2FTrEMBL:Q7CIQ4,Genbank:YP_002347312.1,GeneID:1175177;gbkey=CDS;product=hypothetical protein;protein_id=YP_002347312.1;transl_table=11
NC_003143.1	RefSeq	gene	2640270	2640728	.	+	.	ID=gene2263;Name=YPO2346;Dbxref=GeneID:1175178;gbkey=Gene;locus_tag=YPO2346
NC_003143.1	RefSeq	CDS	2640270	2640728	.	+	0	ID=cds2163;Name=YP_002347313.1;Parent=gene2263;Dbxref=UniProtKB%2FTrEMBL:Q74TM0,Genbank:YP_002347313.1,GeneID:1175178;gbkey=CDS;product=hypothetical protein;protein_id=YP_002347313.1;transl_table=11
NC_003143.1	RefSeq	gene	2640738	2641799	.	-	.	ID=gene2264;Name=YPO2347;Dbxref=GeneID:1175179;gbkey=Gene;locus_tag=YPO2347
NC_003143.1	RefSeq	CDS	2640738	2641799	.	-	0	ID=cds2164;Name=YP_002347314.1;Parent=gene2264;Dbxref=InterPro:IPR006507,UniProtKB%2FTrEMBL:Q0WEH4,Genbank:YP_002347314.1,GeneID:1175179;gbkey=CDS;product=hypothetical protein;protein_id=YP_002347314.1;transl_table=11
NC_003143.1	RefSeq	gene	2641796	2643193	.	-	.	ID=gene2265;Name=YPO2348;Dbxref=GeneID:1175180;gbkey=Gene;locus_tag=YPO2348
NC_003143.1	RefSeq	CDS	2641796	2643193	.	-	0	ID=cds2165;Name=YP_002347315.1;Parent=gene2265;Dbxref=InterPro:IPR007413,UniProtKB%2FTrEMBL:Q7CIQ5,Genbank:YP_002347315.1,GeneID:1175180;gbkey=CDS;product=hypothetical protein;protein_id=YP_002347315.1;transl_table=11
NC_003143.1	RefSeq	ribosome_entry_site	2641810	2641813	.	-	.	ID=id1680;Dbxref=GeneID:1175180;gbkey=RBS
NC_003143.1	RefSeq	region	2643095	2643118	.	-	.	ID=id1681;Note=PS00017 ATP%2FGTP-binding site motif A %28P-loop%29.;Dbxref=GeneID:1175180;gbkey=misc_feature
NC_003143.1	RefSeq	ribosome_entry_site	2643198	2643203	.	-	.	ID=id1682;gbkey=RBS
NC_003143.1	RefSeq	gene	2643501	2643860	.	-	.	ID=gene2266;Name=pspC;Dbxref=GeneID:1175181;gbkey=Gene;gene=pspC;locus_tag=YPO2349
NC_003143.1	RefSeq	CDS	2643501	2643860	.	-	0	ID=cds2166;Name=YP_002347316.1;Parent=gene2266;Note=with PsbB forms toxin%2Fantitoxin pair%3B activates the psp operon in response to phage infection%2C exposure to ethanol or osmotic shock;Dbxref=InterPro:IPR007168,UniProtKB%2FTrEMBL:Q7CIQ6,Genbank:YP_002347316.1,GeneID:1175181;gbkey=CDS;gene=pspC;product=DNA-binding transcriptional activator PspC;protein_id=YP_002347316.1;transl_table=11
NC_003143.1	RefSeq	region	2643678	2643743	.	-	.	ID=id1683;Note=1 probable transmembrane helix predicted;Dbxref=GeneID:1175181;gbkey=misc_feature;gene=pspC
NC_003143.1	RefSeq	gene	2643860	2644087	.	-	.	ID=gene2267;Name=pspB;Dbxref=GeneID:1175182;gbkey=Gene;gene=pspB;locus_tag=YPO2350
NC_003143.1	RefSeq	CDS	2643860	2644087	.	-	0	ID=cds2167;Name=YP_002347317.1;Parent=gene2267;Note=acts together with PspC to induce psp operon during infection with phage%2C exposure to ethanol or osmotic shock%3B forms a complex with PspA and C%3B PspC is required for PspAB binding;Dbxref=InterPro:IPR009554,UniProtKB%2FTrEMBL:Q7CIQ7,Genbank:YP_002347317.1,GeneID:1175182;gbkey=CDS;gene=pspB;product=phage shock protein B;protein_id=YP_002347317.1;transl_table=11
NC_003143.1	RefSeq	ribosome_entry_site	2643870	2643873	.	-	.	ID=id1684;Dbxref=GeneID:1175182;gbkey=RBS;gene=pspB
NC_003143.1	RefSeq	region	2644010	2644075	.	-	.	ID=id1685;Note=1 probable transmembrane helix predicted;Dbxref=GeneID:1175182;gbkey=misc_feature;gene=pspB
NC_003143.1	RefSeq	gene	2644249	2644914	.	-	.	ID=gene2268;Name=pspA;Dbxref=GeneID:1175183;gbkey=Gene;gene=pspA;locus_tag=YPO2351
NC_003143.1	RefSeq	CDS	2644249	2644914	.	-	0	ID=cds2168;Name=YP_002347318.1;Parent=gene2268;Note=involved in maintaining membrane potential under membrane stress conditions%3B also acts as a negative transcriptional regulator of the phage shock protein %28psp%29 operon%28pspABCDE%29 by regulating the transcriptional activator PspF;Dbxref=InterPro:IPR007157,UniProtKB%2FTrEMBL:Q7CIQ8,Genbank:YP_002347318.1,GeneID:1175183;gbkey=CDS;gene=pspA;product=phage shock protein PspA;protein_id=YP_002347318.1;transl_table=11
NC_003143.1	RefSeq	gene	2645159	2646187	.	+	.	ID=gene2269;Name=pspF;Dbxref=GeneID:1175184;gbkey=Gene;gene=pspF;locus_tag=YPO2352
NC_003143.1	RefSeq	CDS	2645159	2646187	.	+	0	ID=cds2169;Name=YP_002347319.1;Parent=gene2269;Note=transcriptional activator for pspABCE which are induced in response to phage proteins%2C membrane altering stresses%2C and impaired proton expor;Dbxref=InterPro:IPR002078,InterPro:IPR002197,InterPro:IPR003593,InterPro:IPR009057,UniProtKB%2FTrEMBL:Q0WEG9,Genbank:YP_002347319.1,GeneID:1175184;gbkey=CDS;gene=pspF;product=phage shock protein operon transcriptional activator;protein_id=YP_002347319.1;transl_table=11
NC_003143.1	RefSeq	region	2645438	2645485	.	+	.	ID=id1686;Note=PS00676 Sigma-54 interaction domain ATP-binding region B signature.;Dbxref=GeneID:1175184;gbkey=misc_feature;gene=pspF
NC_003143.1	RefSeq	region	2645822	2645851	.	+	.	ID=id1687;Note=PS00688 Sigma-54 interaction domain C-terminal part signature.;Dbxref=GeneID:1175184;gbkey=misc_feature;gene=pspF
NC_003143.1	RefSeq	region	2646068	2646133	.	+	.	ID=id1688;Note=Predicted helix-turn-helix motif with score 1541 %28%2B4.44 SD%29 at aa 309-330%2C sequence FNQRKAAHLLGLTYHQLRGLLK;Dbxref=GeneID:1175184;gbkey=misc_feature;gene=pspF
NC_003143.1	RefSeq	repeat_region	2646244	2646955	.	-	.	ID=id1689;Note=Contains a %27A%27 at nucleotide position 315%7EIS200-like insertion sequence:IS1541;gbkey=repeat_region
NC_003143.1	RefSeq	gene	2646352	2646810	.	-	.	ID=gene2270;Name=tnp;Dbxref=GeneID:1175185;gbkey=Gene;gene=tnp;locus_tag=YPO2353
NC_003143.1	RefSeq	CDS	2646352	2646810	.	-	0	ID=cds2170;Name=YP_002347320.1;Parent=gene2270;Dbxref=InterPro:IPR002686,UniProtKB%2FTrEMBL:Q56938,Genbank:YP_002347320.1,GeneID:1175185;gbkey=CDS;gene=tnp;product=transposase for the IS1541 insertion element;protein_id=YP_002347320.1;transl_table=11
NC_003143.1	RefSeq	gene	2647154	2647339	.	+	.	ID=gene2271;Name=YPO2354;Dbxref=GeneID:1175186;gbkey=Gene;locus_tag=YPO2354
NC_003143.1	RefSeq	CDS	2647154	2647339	.	+	0	ID=cds2171;Name=YP_002347321.1;Parent=gene2271;Note=No significant database hits;Dbxref=UniProtKB%2FTrEMBL:Q74TL2,Genbank:YP_002347321.1,GeneID:1175186;gbkey=CDS;product=hypothetical protein;protein_id=YP_002347321.1;transl_table=11
NC_003143.1	RefSeq	gene	2647475	2649121	.	+	.	ID=gene2272;Name=sapA;Dbxref=GeneID:1175187;gbkey=Gene;gene=sapA;locus_tag=YPO2355
NC_003143.1	RefSeq	CDS	2647475	2649121	.	+	0	ID=cds2172;Name=YP_002347322.1;Parent=gene2272;Dbxref=InterPro:IPR000914,InterPro:IPR001356,UniProtKB%2FTrEMBL:Q7CIR0,Genbank:YP_002347322.1,GeneID:1175187;gbkey=CDS;gene=sapA;product=peptide transport periplasmic protein;protein_id=YP_002347322.1;transl_table=11
NC_003143.1	RefSeq	region	2647727	2647795	.	+	.	ID=id1690;Note=PS01040 Bacterial extracellular solute-binding proteins%2C family 5 signature.;Dbxref=GeneID:1175187;gbkey=misc_feature;gene=sapA
NC_003143.1	RefSeq	ribosome_entry_site	2649104	2649107	.	+	.	ID=id1691;Dbxref=GeneID:1175187;gbkey=RBS;gene=sapA
NC_003143.1	RefSeq	gene	2649118	2650083	.	+	.	ID=gene2273;Name=sapB;Dbxref=GeneID:1175188;gbkey=Gene;gene=sapB;locus_tag=YPO2356
NC_003143.1	RefSeq	CDS	2649118	2650083	.	+	0	ID=cds2173;Name=YP_002347323.1;Parent=gene2273;Dbxref=InterPro:IPR000515,UniProtKB%2FTrEMBL:Q7CIR1,Genbank:YP_002347323.1,GeneID:1175188;gbkey=CDS;gene=sapB;product=peptide transport system permease;protein_id=YP_002347323.1;transl_table=11
NC_003143.1	RefSeq	gene	2650070	2650960	.	+	.	ID=gene2274;Name=sapC;Dbxref=GeneID:1175189;gbkey=Gene;gene=sapC;locus_tag=YPO2357
NC_003143.1	RefSeq	CDS	2650070	2650960	.	+	0	ID=cds2174;Name=YP_002347324.1;Parent=gene2274;Dbxref=InterPro:IPR000515,UniProtKB%2FTrEMBL:Q7CIR2,Genbank:YP_002347324.1,GeneID:1175189;gbkey=CDS;gene=sapC;product=peptide transport system permease;protein_id=YP_002347324.1;transl_table=11
NC_003143.1	RefSeq	gene	2650960	2651952	.	+	.	ID=gene2275;Name=sapD;Dbxref=GeneID:1175190;gbkey=Gene;gene=sapD;locus_tag=YPO2358
NC_003143.1	RefSeq	CDS	2650960	2651952	.	+	0	ID=cds2175;Name=YP_002347325.1;Parent=gene2275;Dbxref=InterPro:IPR003439,InterPro:IPR003593,InterPro:IPR010066,InterPro:IPR013563,UniProtKB%2FTrEMBL:Q7CIR3,Genbank:YP_002347325.1,GeneID:1175190;gbkey=CDS;gene=sapD;product=peptide transport system ATP-binding protein;protein_id=YP_002347325.1;transl_table=11
NC_003143.1	RefSeq	region	2651077	2651100	.	+	.	ID=id1692;Note=PS00017 ATP%2FGTP-binding site motif A %28P-loop%29.;Dbxref=GeneID:1175190;gbkey=misc_feature;gene=sapD
NC_003143.1	RefSeq	ribosome_entry_site	2651940	2651944	.	+	.	ID=id1693;Dbxref=GeneID:1175190;gbkey=RBS;gene=sapD
NC_003143.1	RefSeq	gene	2651952	2652767	.	+	.	ID=gene2276;Name=sapF;Dbxref=GeneID:1175191;gbkey=Gene;gene=sapF;locus_tag=YPO2359
NC_003143.1	RefSeq	CDS	2651952	2652767	.	+	0	ID=cds2176;Name=YP_002347326.1;Parent=gene2276;Dbxref=InterPro:IPR003439,InterPro:IPR003593,UniProtKB%2FTrEMBL:Q7CIR4,Genbank:YP_002347326.1,GeneID:1175191;gbkey=CDS;gene=sapF;product=peptide transport system ATP-binding protein;protein_id=YP_002347326.1;transl_table=11
NC_003143.1	RefSeq	region	2652090	2652113	.	+	.	ID=id1694;Note=PS00017 ATP%2FGTP-binding site motif A %28P-loop%29.;Dbxref=GeneID:1175191;gbkey=misc_feature;gene=sapF
NC_003143.1	RefSeq	region	2652402	2652446	.	+	.	ID=id1695;Note=PS00211 ABC transporters family signature.;Dbxref=GeneID:1175191;gbkey=misc_feature;gene=sapF
NC_003143.1	RefSeq	ribosome_entry_site	2653144	2653148	.	+	.	ID=id1696;gbkey=RBS
NC_003143.1	RefSeq	gene	2653157	2654437	.	+	.	ID=gene2277;Name=YPO2360;Dbxref=GeneID:1175192;gbkey=Gene;locus_tag=YPO2360
NC_003143.1	RefSeq	CDS	2653157	2654437	.	+	0	ID=cds2177;Name=YP_002347327.1;Parent=gene2277;Dbxref=UniProtKB%2FTrEMBL:Q7CIR5,Genbank:YP_002347327.1,GeneID:1175192;gbkey=CDS;product=hypothetical protein;protein_id=YP_002347327.1;transl_table=11
NC_003143.1	RefSeq	ribosome_entry_site	2655071	2655074	.	+	.	ID=id1697;gbkey=RBS
NC_003143.1	RefSeq	gene	2655080	2656585	.	+	.	ID=gene2278;Name=tppB;Dbxref=GeneID:1175193;gbkey=Gene;gene=tppB;locus_tag=YPO2361
NC_003143.1	RefSeq	CDS	2655080	2656585	.	+	0	ID=cds2178;Name=YP_002347328.1;Parent=gene2278;Note=mutations in this gene confer resistance to the toxic peptide alafosfalin in Salmonella typhimurium%3B member of proton-dependent oligopeptide transport %28POT%29 system family%3B in Escherichia coli this gene is regulated by OmpR although not via osmoregulation;Dbxref=InterPro:IPR000109,InterPro:IPR005279,UniProtKB%2FTrEMBL:Q0WEG0,Genbank:YP_002347328.1,GeneID:1175193;gbkey=CDS;gene=tppB;product=tripeptide transporter permease;protein_id=YP_002347328.1;transl_table=11
NC_003143.1	RefSeq	region	2655533	2655571	.	+	.	ID=id1698;Note=PS01023 PTR2 family proton%2Foligopeptide symporters signature 2.;Dbxref=GeneID:1175193;gbkey=misc_feature;gene=tppB
NC_003143.1	RefSeq	ribosome_entry_site	2656827	2656835	.	+	.	ID=id1699;gbkey=RBS
NC_003143.1	RefSeq	gene	2656840	2657430	.	+	.	ID=gene2279;Name=YPO2362;Dbxref=GeneID:1175194;gbkey=Gene;locus_tag=YPO2362
NC_003143.1	RefSeq	CDS	2656840	2657430	.	+	0	ID=cds2179;Name=YP_002347329.1;Parent=gene2279;Dbxref=InterPro:IPR009698,UniProtKB%2FTrEMBL:Q7CIR6,Genbank:YP_002347329.1,GeneID:1175194;gbkey=CDS;product=hypothetical protein;protein_id=YP_002347329.1;transl_table=11
NC_003143.1	RefSeq	gene	2657676	2657939	.	+	.	ID=gene2280;Name=YPO2363;Dbxref=GeneID:1175195;gbkey=Gene;locus_tag=YPO2363
NC_003143.1	RefSeq	CDS	2657676	2657939	.	+	0	ID=cds2180;Name=YP_002347330.1;Parent=gene2280;Dbxref=UniProtKB%2FTrEMBL:Q7CIR7,Genbank:YP_002347330.1,GeneID:1175195;gbkey=CDS;product=hypothetical protein;protein_id=YP_002347330.1;transl_table=11
NC_003143.1	RefSeq	repeat_region	2658026	2659979	.	-	.	ID=id1700;Note=insertion sequence:IS100;gbkey=repeat_region
NC_003143.1	RefSeq	repeat_region	2658026	2658053	.	+	.	ID=id1701;Note=IS100 inverted repeat;gbkey=repeat_region
NC_003143.1	RefSeq	gene	2658092	2658874	.	-	.	ID=gene2281;Name=YPO2364;Note=ypmt1.57c;Dbxref=GeneID:1175196;gbkey=Gene;locus_tag=YPO2364
NC_003143.1	RefSeq	CDS	2658092	2658874	.	-	0	ID=cds2181;Name=YP_002347331.1;Parent=gene2281;Dbxref=InterPro:IPR001270,InterPro:IPR002611,InterPro:IPR003593,UniProtKB%2FTrEMBL:Q7ARK4,Genbank:YP_002347331.1,GeneID:1175196;gbkey=CDS;product=transposase%2FIS protein;protein_id=YP_002347331.1;transl_table=11
NC_003143.1	RefSeq	region	2658524	2658547	.	-	.	ID=id1702;Note=PS00017 ATP%2FGTP-binding site motif A %28P-loop%29.;Dbxref=GeneID:1175196;gbkey=misc_feature
NC_003143.1	RefSeq	gene	2658871	2659893	.	-	.	ID=gene2282;Name=y1093;Dbxref=GeneID:1175197;gbkey=Gene;gene=y1093;gene_synonym=ypmt1;locus_tag=YPO2365
NC_003143.1	RefSeq	CDS	2658871	2659893	.	-	0	ID=cds2182;Name=YP_002347332.1;Parent=gene2282;Dbxref=InterPro:IPR001584,InterPro:IPR006120,InterPro:IPR009057,InterPro:IPR012287,InterPro:IPR012337,UniProtKB%2FTrEMBL:Q7ARN5,Genbank:YP_002347332.1,GeneID:1175197;gbkey=CDS;gene=y1093;product=transposase for insertion sequence IS100;protein_id=YP_002347332.1;transl_table=11
NC_003143.1	RefSeq	region	2659777	2659842	.	-	.	ID=id1703;Note=Predicted helix-turn-helix motif with score 2147 %28%2B6.50 SD%29 at aa 18-39%2C sequence MSSRAIARELGISRNTVKRYLQ;Dbxref=GeneID:1175197;gbkey=misc_feature;gene=y1093
NC_003143.1	RefSeq	repeat_region	2659952	2659979	.	-	.	ID=id1704;Note=IS100 inverted repeat;gbkey=repeat_region
NC_003143.1	RefSeq	gene	2659979	2660098	.	+	.	ID=gene2283;Name=YPO2366;Dbxref=GeneID:1175198;gbkey=Gene;locus_tag=YPO2366;pseudo=true
NC_003143.1	RefSeq	region	2659979	2660098	.	+	.	ID=id1705;Note=No significant database matches. This CDS is likely to have been disrupted by the upstream IS100 element;Dbxref=GeneID:1175198;gbkey=misc_feature;pseudo=true
NC_003143.1	RefSeq	region	2660018	2660086	.	+	.	ID=id1706;Note=1 probable transmembrane helix predicted;Dbxref=GeneID:1175198;gbkey=misc_feature
NC_003143.1	RefSeq	ribosome_entry_site	2660132	2660138	.	+	.	ID=id1707;gbkey=RBS
NC_003143.1	RefSeq	gene	2660143	2660748	.	+	.	ID=gene2284;Name=gst;Dbxref=GeneID:1175199;gbkey=Gene;gene=gst;locus_tag=YPO2367
NC_003143.1	RefSeq	CDS	2660143	2660748	.	+	0	ID=cds2183;Name=YP_002347333.1;Parent=gene2284;Dbxref=InterPro:IPR004045,InterPro:IPR004046,InterPro:IPR010987,InterPro:IPR012335,InterPro:IPR012336,UniProtKB%2FTrEMBL:Q0WEF5,Genbank:YP_002347333.1,GeneID:1175199;gbkey=CDS;gene=gst;product=glutathionine S-transferase;protein_id=YP_002347333.1;transl_table=11
NC_003143.1	RefSeq	gene	2660808	2661668	.	-	.	ID=gene2285;Name=pdxY;Dbxref=GeneID:1175200;gbkey=Gene;gene=pdxY;locus_tag=YPO2368
NC_003143.1	RefSeq	CDS	2660808	2661668	.	-	0	ID=cds2184;Name=YP_002347334.1;Parent=gene2285;Note=catalyzes the formation of pyridoxal 5%27-phosphate from pyridoxal;Dbxref=InterPro:IPR004625,InterPro:IPR011611,UniProtKB%2FTrEMBL:Q7CIR8,Genbank:YP_002347334.1,GeneID:1175200;gbkey=CDS;gene=pdxY;product=pyridoxamine kinase;protein_id=YP_002347334.1;transl_table=11
NC_003143.1	RefSeq	gene	2661823	2663097	.	-	.	ID=gene2286;Name=tyrS;Dbxref=GeneID:1175201;gbkey=Gene;gene=tyrS;locus_tag=YPO2369
NC_003143.1	RefSeq	CDS	2661823	2663097	.	-	0	ID=cds2185;Name=YP_002347335.1;Parent=gene2286;Note=catalyzes the formation of tyrosyl-tRNA%28Tyr%29 from tyrosine and tRNA%28Tyr%29;Dbxref=InterPro:IPR001412,InterPro:IPR002305,InterPro:IPR002307,InterPro:IPR002942,UniProtKB%2FTrEMBL:Q0WEF3,Genbank:YP_002347335.1,GeneID:1175201;gbkey=CDS;gene=tyrS;product=tyrosyl-tRNA synthetase;protein_id=YP_002347335.1;transl_table=11
NC_003143.1	RefSeq	region	2662942	2662974	.	-	.	ID=id1708;Note=PS00178 Aminoacyl-transfer RNA synthetases class-I signature.;Dbxref=GeneID:1175201;gbkey=misc_feature;gene=tyrS
NC_003143.1	RefSeq	ribosome_entry_site	2663104	2663107	.	-	.	ID=id1709;gbkey=RBS
NC_003143.1	RefSeq	gene	2663279	2663932	.	-	.	ID=gene2287;Name=pdxH;Dbxref=GeneID:1175202;gbkey=Gene;gene=pdxH;locus_tag=YPO2370
NC_003143.1	RefSeq	CDS	2663279	2663932	.	-	0	ID=cds2186;Name=YP_002347336.1;Parent=gene2287;Note=catalyzes the formation of pyridoxal 5%27-phosphate from pyridoxamine 5%27-phosphate;Dbxref=InterPro:IPR000659,InterPro:IPR009002,InterPro:IPR011576,InterPro:IPR012349,UniProtKB%2FTrEMBL:Q0WEF2,Genbank:YP_002347336.1,GeneID:1175202;gbkey=CDS;gene=pdxH;product=pyridoxamine 5%27-phosphate oxidase;protein_id=YP_002347336.1;transl_table=11
NC_003143.1	RefSeq	region	2663333	2663374	.	-	.	ID=id1710;Note=PS01064 Pyridoxamine 5%27-phosphate oxidase signature.;Dbxref=GeneID:1175202;gbkey=misc_feature;gene=pdxH
NC_003143.1	RefSeq	gene	2664023	2664337	.	-	.	ID=gene2288;Name=YPO2371;Dbxref=GeneID:1175203;gbkey=Gene;locus_tag=YPO2371
NC_003143.1	RefSeq	CDS	2664023	2664337	.	-	0	ID=cds2187;Name=YP_002347337.1;Parent=gene2288;Dbxref=UniProtKB%2FTrEMBL:Q0WEF1,Genbank:YP_002347337.1,GeneID:1175203;gbkey=CDS;product=lipoprotein;protein_id=YP_002347337.1;transl_table=11
NC_003143.1	RefSeq	region	2664290	2664322	.	-	.	ID=id1711;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site.;Dbxref=GeneID:1175203;gbkey=misc_feature
NC_003143.1	RefSeq	gene	2664395	2665507	.	-	.	ID=gene2289;Name=anmK;Dbxref=GeneID:1175204;gbkey=Gene;gene=anmK;locus_tag=YPO2372
NC_003143.1	RefSeq	CDS	2664395	2665507	.	-	0	ID=cds2188;Name=YP_002347338.1;Parent=gene2289;Note=catalyzes hydrolysis of 1%2C6-anhydro bond of anyhydro-N-acetylmuramic acid %28anhMurNAc%29 and phosphorylates anhMurNAc to produce N-acetyl-muramate-6-phosphate%3B involved in murein recycling;Dbxref=InterPro:IPR005338,UniProtKB%2FSwiss-Prot:Q0WEF0,UniProtKB%2FTrEMBL:Q0WEF0,Genbank:YP_002347338.1,GeneID:1175204;gbkey=CDS;gene=anmK;product=anhydro-N-acetylmuramic acid kinase;protein_id=YP_002347338.1;transl_table=11
NC_003143.1	RefSeq	gene	2666063	2666530	.	+	.	ID=gene2290;Name=pcp;Dbxref=GeneID:1175205;gbkey=Gene;gene=pcp;gene_synonym=pcpY,slyB;locus_tag=YPO2373
NC_003143.1	RefSeq	CDS	2666063	2666530	.	+	0	ID=cds2189;Name=YP_002347339.1;Parent=gene2290;Dbxref=InterPro:IPR008816,UniProtKB%2FTrEMBL:Q7CIS0,Genbank:YP_002347339.1,GeneID:1175205;gbkey=CDS;gene=pcp;product=lipoprotein;protein_id=YP_002347339.1;transl_table=11
NC_003143.1	RefSeq	region	2666084	2666116	.	+	.	ID=id1712;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site.;Dbxref=GeneID:1175205;gbkey=misc_feature;gene=pcp
NC_003143.1	RefSeq	gene	2666674	2667105	.	-	.	ID=gene2291;Name=slyA;Dbxref=GeneID:1175206;gbkey=Gene;gene=slyA;locus_tag=YPO2374
NC_003143.1	RefSeq	CDS	2666674	2667105	.	-	0	ID=cds2190;Name=YP_002347340.1;Parent=gene2291;Note=Transcription regulator that can both activate or repress expression;Dbxref=InterPro:IPR000835,InterPro:IPR011991,UniProtKB%2FTrEMBL:Q0WEE8,Genbank:YP_002347340.1,GeneID:1175206;gbkey=CDS;gene=slyA;product=transcriptional regulator SlyA;protein_id=YP_002347340.1;transl_table=11
NC_003143.1	RefSeq	region	2666902	2666967	.	-	.	ID=id1713;Note=Predicted helix-turn-helix motif with score 1097 %28%2B2.92 SD%29 at aa 47-68%2C sequence QSQIQLAKAIGIEQPSLVRTLD;Dbxref=GeneID:1175206;gbkey=misc_feature;gene=slyA
NC_003143.1	RefSeq	ribosome_entry_site	2667111	2667118	.	-	.	ID=id1714;gbkey=RBS
NC_003143.1	RefSeq	gene	2667903	2668799	.	-	.	ID=gene2292;Name=YPO2375;Dbxref=GeneID:1175207;gbkey=Gene;locus_tag=YPO2375
NC_003143.1	RefSeq	CDS	2667903	2668799	.	-	0	ID=cds2191;Name=YP_002347341.1;Parent=gene2292;Dbxref=InterPro:IPR001395,UniProtKB%2FTrEMBL:Q74TJ5,Genbank:YP_002347341.1,GeneID:1175207;gbkey=CDS;product=aldo%2Fketo reductase;protein_id=YP_002347341.1;transl_table=11
NC_003143.1	RefSeq	ribosome_entry_site	2668808	2668812	.	-	.	ID=id1715;gbkey=RBS
NC_003143.1	RefSeq	gene	2668931	2669170	.	-	.	ID=gene2293;Name=YPO2376;Dbxref=GeneID:1175208;gbkey=Gene;locus_tag=YPO2376
NC_003143.1	RefSeq	CDS	2668931	2669170	.	-	0	ID=cds2192;Name=YP_002347342.2;Parent=gene2293;Dbxref=InterPro:IPR010710,UniProtKB%2FTrEMBL:Q74TJ4,Genbank:YP_002347342.2,GeneID:1175208;gbkey=CDS;product=hypothetical protein;protein_id=YP_002347342.2;transl_table=11
NC_003143.1	RefSeq	gene	2669344	2670981	.	+	.	ID=gene2294;Name=YPO2377;Dbxref=GeneID:1175209;gbkey=Gene;locus_tag=YPO2377
NC_003143.1	RefSeq	CDS	2669344	2670981	.	+	0	ID=cds2193;Name=YP_002347343.1;Parent=gene2294;Note=with ZipA and an unidentified 24 kDa protein forms a complex involved in cell division;Dbxref=InterPro:IPR000917,InterPro:IPR012549,UniProtKB%2FTrEMBL:Q74TJ3,Genbank:YP_002347343.1,GeneID:1175209;gbkey=CDS;product=cell division protein;protein_id=YP_002347343.1;transl_table=11
NC_003143.1	RefSeq	region	2669365	2669397	.	+	.	ID=id1716;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site.;Dbxref=GeneID:1175209;gbkey=misc_feature
NC_003143.1	RefSeq	gene	2671204	2671803	.	+	.	ID=gene2295;Name=YPO2378;Dbxref=GeneID:1175210;gbkey=Gene;locus_tag=YPO2378
NC_003143.1	RefSeq	CDS	2671204	2671803	.	+	0	ID=cds2194;Name=YP_002347344.1;Parent=gene2295;Dbxref=InterPro:IPR001647,InterPro:IPR009057,InterPro:IPR011075,InterPro:IPR012287,UniProtKB%2FTrEMBL:Q7CIS1,Genbank:YP_002347344.1,GeneID:1175210;gbkey=CDS;product=TetR family transcriptional regulator;protein_id=YP_002347344.1;transl_table=11
NC_003143.1	RefSeq	region	2671264	2671332	.	+	.	ID=id1717;Note=1 probable transmembrane helix predicted;Dbxref=GeneID:1175210;gbkey=misc_feature
NC_003143.1	RefSeq	gene	2671891	2672988	.	+	.	ID=gene2296;Name=YPO2379;Dbxref=GeneID:1175211;gbkey=Gene;locus_tag=YPO2379
NC_003143.1	RefSeq	CDS	2671891	2672988	.	+	0	ID=cds2195;Name=YP_002347345.1;Parent=gene2296;Note=FMN-linked%3B catalyzes the formation of N-ethylsuccinimide from N-ethylmaleimide;Dbxref=InterPro:IPR001155,UniProtKB%2FTrEMBL:Q74TJ1,Genbank:YP_002347345.1,GeneID:1175211;gbkey=CDS;product=N-ethylmaleimide reductase;protein_id=YP_002347345.1;transl_table=11
NC_003143.1	RefSeq	gene	2673209	2676163	.	-	.	ID=gene2297;Name=sepC;Dbxref=GeneID:1175212;gbkey=Gene;gene=sepC;locus_tag=YPO2380
NC_003143.1	RefSeq	CDS	2673209	2676163	.	-	0	ID=cds2196;Name=YP_002347346.1;Parent=gene2297;Dbxref=InterPro:IPR006530,UniProtKB%2FTrEMBL:Q74TJ0,Genbank:YP_002347346.1,GeneID:1175212;gbkey=CDS;gene=sepC;product=insecticial toxin;protein_id=YP_002347346.1;transl_table=11
NC_003143.1	RefSeq	ribosome_entry_site	2676170	2676175	.	-	.	ID=id1718;gbkey=RBS
NC_003143.1	RefSeq	ribosome_entry_site	2676426	2676429	.	+	.	ID=id1719;gbkey=RBS
NC_003143.1	RefSeq	gene	2676436	2676843	.	+	.	ID=gene2298;Name=gloA;Dbxref=GeneID:1175213;gbkey=Gene;gene=gloA;locus_tag=YPO2381
NC_003143.1	RefSeq	CDS	2676436	2676843	.	+	0	ID=cds2197;Name=YP_002347347.1;Parent=gene2298;Dbxref=InterPro:IPR004360,InterPro:IPR004361,InterPro:IPR011588,UniProtKB%2FTrEMBL:Q0WEE1,Genbank:YP_002347347.1,GeneID:1175213;gbkey=CDS;gene=gloA;product=lactoylglutathione lyase;protein_id=YP_002347347.1;transl_table=11
NC_003143.1	RefSeq	region	2676448	2676513	.	+	.	ID=id1720;Note=PS00934 Glyoxalase I signature 1.;Dbxref=GeneID:1175213;gbkey=misc_feature;gene=gloA
NC_003143.1	RefSeq	gene	2676955	2677602	.	+	.	ID=gene2299;Name=rnt;Dbxref=GeneID:1175214;gbkey=Gene;gene=rnt;locus_tag=YPO2382
NC_003143.1	RefSeq	CDS	2676955	2677602	.	+	0	ID=cds2198;Name=YP_002347348.1;Parent=gene2299;Note=Responsible for the end-turnover of tRNA: specifically removes the terminal AMP residue from uncharged tRNA %28tRNA-C-C-A%29;Dbxref=InterPro:IPR005987,InterPro:IPR006055,InterPro:IPR012337,InterPro:IPR013520,UniProtKB%2FTrEMBL:Q0WEE0,Genbank:YP_002347348.1,GeneID:1175214;gbkey=CDS;gene=rnt;product=ribonuclease T;protein_id=YP_002347348.1;transl_table=11
NC_003143.1	RefSeq	gene	2677911	2678261	.	-	.	ID=gene2300;Name=YPO2383;Dbxref=GeneID:1175215;gbkey=Gene;locus_tag=YPO2383
NC_003143.1	RefSeq	CDS	2677911	2678261	.	-	0	ID=cds2199;Name=YP_002347349.1;Parent=gene2300;Dbxref=InterPro:IPR002109,InterPro:IPR004480,InterPro:IPR012335,InterPro:IPR012336,UniProtKB%2FTrEMBL:Q0WED9,Genbank:YP_002347349.1,GeneID:1175215;gbkey=CDS;product=hypothetical protein;protein_id=YP_002347349.1;transl_table=11
NC_003143.1	RefSeq	ribosome_entry_site	2678271	2678274	.	-	.	ID=id1721;gbkey=RBS
NC_003143.1	RefSeq	gene	2678361	2678582	.	-	.	ID=gene2301;Name=YPO2384;Dbxref=GeneID:1175216;gbkey=Gene;locus_tag=YPO2384
NC_003143.1	RefSeq	CDS	2678361	2678582	.	-	0	ID=cds2200;Name=YP_002347350.1;Parent=gene2301;Note=No significant database hits. Doubtful CDS;Dbxref=UniProtKB%2FTrEMBL:Q0WED8,Genbank:YP_002347350.1,GeneID:1175216;gbkey=CDS;product=hypothetical protein;protein_id=YP_002347350.1;transl_table=11
NC_003143.1	RefSeq	gene	2678686	2679552	.	+	.	ID=gene2302;Name=YPO2385;Dbxref=GeneID:1175217;gbkey=Gene;locus_tag=YPO2385
NC_003143.1	RefSeq	CDS	2678686	2679552	.	+	0	ID=cds2201;Name=YP_002347351.1;Parent=gene2302;Dbxref=InterPro:IPR000064,UniProtKB%2FTrEMBL:Q0WED7,Genbank:YP_002347351.1,GeneID:1175217;gbkey=CDS;product=hypothetical protein;protein_id=YP_002347351.1;transl_table=11
NC_003143.1	RefSeq	ribosome_entry_site	2679916	2679923	.	+	.	ID=id1722;gbkey=RBS
NC_003143.1	RefSeq	gene	2679930	2680508	.	+	.	ID=gene2303;Name=sodB;Dbxref=GeneID:1175218;gbkey=Gene;gene=sodB;locus_tag=YPO2386
NC_003143.1	RefSeq	CDS	2679930	2680508	.	+	0	ID=cds2202;Name=YP_002347352.1;Parent=gene2303;Note=SodB%3B iron binding%3B present under aerobic and anaerobic conditions%3B destroys free radicals;Dbxref=InterPro:IPR001189,UniProtKB%2FTrEMBL:Q0WED6,Genbank:YP_002347352.1,GeneID:1175218;gbkey=CDS;gene=sodB;product=superoxide dismutase;protein_id=YP_002347352.1;transl_table=11
NC_003143.1	RefSeq	region	2680398	2680421	.	+	.	ID=id1723;Note=PS00088 Manganese and iron superoxide dismutases signature.;Dbxref=GeneID:1175218;gbkey=misc_feature;gene=sodB
NC_003143.1	RefSeq	ribosome_entry_site	2681019	2681023	.	+	.	ID=id1724;gbkey=RBS
NC_003143.1	RefSeq	gene	2681035	2682060	.	+	.	ID=gene2304;Name=purR;Dbxref=GeneID:1175219;gbkey=Gene;gene=purR;locus_tag=YPO2387
NC_003143.1	RefSeq	CDS	2681035	2682060	.	+	0	ID=cds2203;Name=YP_002347353.1;Parent=gene2304;Note=binds to the purF operator and coregulates other genes for de novo purine nucleotide synthesis%3B is involved in regulation of purB%2C purC%2C purEK%2C purHD%2C purL%2C purMN and guaBA expression%3B binds hypoxanthine and guanine as inducers;Dbxref=InterPro:IPR000843,InterPro:IPR001761,InterPro:IPR010982,UniProtKB%2FTrEMBL:Q7CIS2,Genbank:YP_002347353.1,GeneID:1175219;gbkey=CDS;gene=purR;product=DNA-binding transcriptional repressor PurR;protein_id=YP_002347353.1;transl_table=11
NC_003143.1	RefSeq	region	2681038	2681103	.	+	.	ID=id1725;Note=Predicted helix-turn-helix motif with score 2032 %28%2B6.11 SD%29 at aa 2-23%2C sequence ATIKDVAKHAGVSTTTVSHVIN;Dbxref=GeneID:1175219;gbkey=misc_feature;gene=purR
NC_003143.1	RefSeq	region	2681044	2681100	.	+	.	ID=id1726;Note=PS00356 Bacterial regulatory proteins%2C lacI family signature.;Dbxref=GeneID:1175219;gbkey=misc_feature;gene=purR
NC_003143.1	RefSeq	gene	2682149	2683081	.	-	.	ID=gene2305;Name=YPO2388;Dbxref=GeneID:1175220;gbkey=Gene;locus_tag=YPO2388
NC_003143.1	RefSeq	CDS	2682149	2683081	.	-	0	ID=cds2204;Name=YP_002347354.1;Parent=gene2305;Dbxref=InterPro:IPR000847,InterPro:IPR005119,InterPro:IPR011991,UniProtKB%2FTrEMBL:Q7CIS3,Genbank:YP_002347354.1,GeneID:1175220;gbkey=CDS;product=DNA-binding transcriptional regulator;protein_id=YP_002347354.1;transl_table=11
NC_003143.1	RefSeq	region	2682938	2683030	.	-	.	ID=id1727;Note=PS00044 Bacterial regulatory proteins%2C lysR family signature.;Dbxref=GeneID:1175220;gbkey=misc_feature
NC_003143.1	RefSeq	region	2682968	2683033	.	-	.	ID=id1728;Note=Predicted helix-turn-helix motif with score 1135 %28%2B3.05 SD%29 at aa 17-38%2C sequence GSFSAAAQELHRVPSAVSYTVR;Dbxref=GeneID:1175220;gbkey=misc_feature
NC_003143.1	RefSeq	gene	2683371	2684573	.	+	.	ID=gene2306;Name=YPO2389;Dbxref=GeneID:1175221;gbkey=Gene;locus_tag=YPO2389
NC_003143.1	RefSeq	CDS	2683371	2684573	.	+	0	ID=cds2205;Name=YP_002347355.1;Parent=gene2306;Note=uncharacterized member of the major facilitator superfamily %28MFS%29;Dbxref=InterPro:IPR004812,InterPro:IPR007114,InterPro:IPR011701,UniProtKB%2FTrEMBL:Q7CIS4,Genbank:YP_002347355.1,GeneID:1175221;gbkey=CDS;product=inner membrane transport protein YdhC;protein_id=YP_002347355.1;transl_table=11
NC_003143.1	RefSeq	ribosome_entry_site	2685044	2685047	.	+	.	ID=id1729;gbkey=RBS
NC_003143.1	RefSeq	gene	2685053	2686204	.	+	.	ID=gene2307;Name=cfa;Dbxref=GeneID:1175222;gbkey=Gene;gene=cfa;locus_tag=YPO2390
NC_003143.1	RefSeq	CDS	2685053	2686204	.	+	0	ID=cds2206;Name=YP_002347356.1;Parent=gene2307;Note=catalyzes the transfer of a methylene group from S-adenosyl-L-methionine to the cis double bond of an unsaturated fatty acid chain resulting in the replacement of the double bond with a methylene bridge;Dbxref=InterPro:IPR003333,UniProtKB%2FTrEMBL:Q7CIS5,Genbank:YP_002347356.1,GeneID:1175222;gbkey=CDS;gene=cfa;product=cyclopropane fatty acyl phospholipid synthase;protein_id=YP_002347356.1;transl_table=11
NC_003143.1	RefSeq	gene	2686255	2686911	.	-	.	ID=gene2308;Name=ribE;Dbxref=GeneID:1175223;gbkey=Gene;gene=ribE;locus_tag=YPO2391
NC_003143.1	RefSeq	CDS	2686255	2686911	.	-	0	ID=cds2207;Name=YP_002347357.1;Parent=gene2308;Note=catalyzes the formation of riboflavin from 6%2C7-dimethyl-8-%281-D-ribityl%29lumazine;Dbxref=InterPro:IPR001783,UniProtKB%2FTrEMBL:Q7CIS6,Genbank:YP_002347357.1,GeneID:1175223;gbkey=CDS;gene=ribE;product=riboflavin synthase subunit alpha;protein_id=YP_002347357.1;transl_table=11
NC_003143.1	RefSeq	region	2686657	2686695	.	-	.	ID=id1730;Note=PS00693 Riboflavin synthase alpha chain family signature.;Dbxref=GeneID:1175223;gbkey=misc_feature;gene=ribE
NC_003143.1	RefSeq	ribosome_entry_site	2686920	2686923	.	-	.	ID=id1731;gbkey=RBS
NC_003143.1	RefSeq	gene	2687160	2688533	.	+	.	ID=gene2309;Name=YPO2392;Dbxref=GeneID:1175224;gbkey=Gene;locus_tag=YPO2392
NC_003143.1	RefSeq	CDS	2687160	2688533	.	+	0	ID=cds2208;Name=YP_002347358.1;Parent=gene2309;Note=NorM%3B MdtK%3B functions as a Na%28%2B%29%2Fdrug antiporter%3B inactivation in Vibrio cholerae results in susceptibility to fluoroquinolones;Dbxref=InterPro:IPR002528,UniProtKB%2FTrEMBL:Q0WED0,Genbank:YP_002347358.1,GeneID:1175224;gbkey=CDS;product=multidrug efflux protein;protein_id=YP_002347358.1;transl_table=11
NC_003143.1	RefSeq	gene	2688776	2688852	.	+	.	ID=gene2310;Name=YPt_30;Dbxref=GeneID:1175225;gbkey=Gene;locus_tag=YPt_30
NC_003143.1	RefSeq	tRNA	2688776	2688852	.	+	.	ID=rna43;Parent=gene2310;Note=tRNA Val anticodon GAC%2C Cove score 96.37;Dbxref=GeneID:1175225;gbkey=tRNA;product=tRNA-Val
NC_003143.1	RefSeq	exon	2688776	2688852	.	+	.	ID=id1732;Parent=rna43;Note=tRNA Val anticodon GAC%2C Cove score 96.37;Dbxref=GeneID:1175225;gbkey=tRNA;product=tRNA-Val
NC_003143.1	RefSeq	gene	2688912	2688988	.	+	.	ID=gene2311;Name=YPt_31;Dbxref=GeneID:1175226;gbkey=Gene;locus_tag=YPt_31
NC_003143.1	RefSeq	tRNA	2688912	2688988	.	+	.	ID=rna44;Parent=gene2311;Note=tRNA Val anticodon GAC%2C Cove score 83.12;Dbxref=GeneID:1175226;gbkey=tRNA;product=tRNA-Val
NC_003143.1	RefSeq	exon	2688912	2688988	.	+	.	ID=id1733;Parent=rna44;Note=tRNA Val anticodon GAC%2C Cove score 83.12;Dbxref=GeneID:1175226;gbkey=tRNA;product=tRNA-Val
NC_003143.1	RefSeq	gene	2689564	2690976	.	+	.	ID=gene2312;Name=pykF;Dbxref=GeneID:1175227;gbkey=Gene;gene=pykF;locus_tag=YPO2393
NC_003143.1	RefSeq	CDS	2689564	2690976	.	+	0	ID=cds2209;Name=YP_002347359.1;Parent=gene2312;Note=catalyzes the formation of phosphoenolpyruvate from pyruvate;Dbxref=InterPro:IPR001697,UniProtKB%2FTrEMBL:Q7CIS8,Genbank:YP_002347359.1,GeneID:1175227;gbkey=CDS;gene=pykF;product=pyruvate kinase;protein_id=YP_002347359.1;transl_table=11
NC_003143.1	RefSeq	region	2690206	2690244	.	+	.	ID=id1734;Note=PS00110 Pyruvate kinase active site signature.;Dbxref=GeneID:1175227;gbkey=misc_feature;gene=pykF
NC_003143.1	RefSeq	gene	2691297	2691533	.	+	.	ID=gene2313;Name=lpp;Dbxref=GeneID:1175228;gbkey=Gene;gene=lpp;gene_synonym=mlpA;locus_tag=YPO2394
NC_003143.1	RefSeq	CDS	2691297	2691533	.	+	0	ID=cds2210;Name=YP_002347360.1;Parent=gene2313;Dbxref=InterPro:IPR006817,UniProtKB%2FTrEMBL:Q0WEC8,Genbank:YP_002347360.1,GeneID:1175228;gbkey=CDS;gene=lpp;product=major outer membrane lipoprotein;protein_id=YP_002347360.1;transl_table=11
NC_003143.1	RefSeq	region	2691327	2691359	.	+	.	ID=id1735;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site.;Dbxref=GeneID:1175228;gbkey=misc_feature;gene=lpp
NC_003143.1	RefSeq	repeat_region	2691579	2692290	.	+	.	ID=id1736;Note=Contains a %27A%27 at nucleotide position 315%7EIS200-like insertion sequence:IS1541;gbkey=repeat_region
NC_003143.1	RefSeq	gene	2691724	2692182	.	+	.	ID=gene2314;Name=tnp;Dbxref=GeneID:1175229;gbkey=Gene;gene=tnp;locus_tag=YPO2395
NC_003143.1	RefSeq	CDS	2691724	2692182	.	+	0	ID=cds2211;Name=YP_002347361.1;Parent=gene2314;Dbxref=InterPro:IPR002686,UniProtKB%2FTrEMBL:Q56938,Genbank:YP_002347361.1,GeneID:1175229;gbkey=CDS;gene=tnp;product=transposase for the IS1541 insertion element;protein_id=YP_002347361.1;transl_table=11
NC_003143.1	RefSeq	repeat_region	2692678	2694631	.	+	.	ID=id1737;Note=insertion sequence:IS100;gbkey=repeat_region
NC_003143.1	RefSeq	repeat_region	2692678	2692705	.	+	.	ID=id1738;Note=IS100 inverted repeat;gbkey=repeat_region
NC_003143.1	RefSeq	gene	2692764	2693786	.	+	.	ID=gene2315;Name=y1093;Dbxref=GeneID:1175230;gbkey=Gene;gene=y1093;gene_synonym=ypmt1;locus_tag=YPO2396
NC_003143.1	RefSeq	CDS	2692764	2693786	.	+	0	ID=cds2212;Name=YP_002347362.1;Parent=gene2315;Dbxref=InterPro:IPR001584,InterPro:IPR006120,InterPro:IPR009057,InterPro:IPR012287,InterPro:IPR012337,UniProtKB%2FTrEMBL:Q7ARN5,Genbank:YP_002347362.1,GeneID:1175230;gbkey=CDS;gene=y1093;product=transposase for insertion sequence IS100;protein_id=YP_002347362.1;transl_table=11
NC_003143.1	RefSeq	region	2692815	2692880	.	+	.	ID=id1739;Note=Predicted helix-turn-helix motif with score 2147 %28%2B6.50 SD%29 at aa 18-39%2C sequence MSSRAIARELGISRNTVKRYLQ;Dbxref=GeneID:1175230;gbkey=misc_feature;gene=y1093
NC_003143.1	RefSeq	gene	2693783	2694565	.	+	.	ID=gene2316;Name=YPO2397;Note=ypmt1.57c;Dbxref=GeneID:1175231;gbkey=Gene;locus_tag=YPO2397
NC_003143.1	RefSeq	CDS	2693783	2694565	.	+	0	ID=cds2213;Name=YP_002347363.1;Parent=gene2316;Dbxref=InterPro:IPR001270,InterPro:IPR002611,InterPro:IPR003593,UniProtKB%2FTrEMBL:Q7ARK4,Genbank:YP_002347363.1,GeneID:1175231;gbkey=CDS;product=transposase%2FIS protein;protein_id=YP_002347363.1;transl_table=11
NC_003143.1	RefSeq	region	2694110	2694133	.	+	.	ID=id1740;Note=PS00017 ATP%2FGTP-binding site motif A %28P-loop%29.;Dbxref=GeneID:1175231;gbkey=misc_feature
NC_003143.1	RefSeq	repeat_region	2694604	2694631	.	-	.	ID=id1741;Note=IS100 inverted repeat;gbkey=repeat_region
NC_003143.1	RefSeq	gene	2694609	2695628	.	-	.	ID=gene2317;Name=YPO2398;Dbxref=GeneID:1175232;gbkey=Gene;locus_tag=YPO2398
NC_003143.1	RefSeq	CDS	2694609	2695628	.	-	0	ID=cds2214;Name=YP_008479716.1;Parent=gene2317;Dbxref=Genbank:YP_008479716.1,GeneID:1175232;gbkey=CDS;product=murein L%2CD-transpeptidase;protein_id=YP_008479716.1;transl_table=11
NC_003143.1	RefSeq	gene	2695899	2696321	.	-	.	ID=gene2318;Name=YPO2399;Dbxref=GeneID:1175233;gbkey=Gene;locus_tag=YPO2399
NC_003143.1	RefSeq	CDS	2695899	2696321	.	-	0	ID=cds2215;Name=YP_002347364.1;Parent=gene2318;Note=Acts with SufS to catalyze the formation of L-alanine from L-cysteine;Dbxref=InterPro:IPR003808,UniProtKB%2FTrEMBL:Q0WEC4,Genbank:YP_002347364.1,GeneID:1175233;gbkey=CDS;product=cysteine desufuration protein SufE;protein_id=YP_002347364.1;transl_table=11
NC_003143.1	RefSeq	gene	2696410	2697630	.	-	.	ID=gene2319;Name=YPO2400;Dbxref=GeneID:1175234;gbkey=Gene;locus_tag=YPO2400
NC_003143.1	RefSeq	CDS	2696410	2697630	.	-	0	ID=cds2216;Name=YP_002347365.1;Parent=gene2319;Note=catalyzes the formation of L-alanine and selenide or sulfanylcysteine from selenocysteine or cysteine;Dbxref=InterPro:IPR000192,InterPro:IPR010970,UniProtKB%2FTrEMBL:Q0WEC3,Genbank:YP_002347365.1,GeneID:1175234;gbkey=CDS;product=bifunctional cysteine desulfurase%2Fselenocysteine lyase;protein_id=YP_002347365.1;transl_table=11
NC_003143.1	RefSeq	region	2696923	2696982	.	-	.	ID=id1742;Note=PS00595 Aminotransferases class-V pyridoxal-phosphate attachment site.;Dbxref=GeneID:1175234;gbkey=misc_feature
NC_003143.1	RefSeq	gene	2697627	2698952	.	-	.	ID=gene2320;Name=YPO2401;Dbxref=GeneID:1175235;gbkey=Gene;locus_tag=YPO2401
NC_003143.1	RefSeq	CDS	2697627	2698952	.	-	0	ID=cds2217;Name=YP_002347366.2;Parent=gene2320;Note=with SufBC activates cysteine desulfurase SufS;Dbxref=InterPro:IPR000825,InterPro:IPR011542,UniProtKB%2FTrEMBL:Q0WEC2,Genbank:YP_002347366.2,GeneID:1175235;gbkey=CDS;product=cysteine desulfurase;protein_id=YP_002347366.2;transl_table=11
NC_003143.1	RefSeq	ribosome_entry_site	2697636	2697639	.	-	.	ID=id1743;Dbxref=GeneID:1175235;gbkey=RBS
NC_003143.1	RefSeq	gene	2698927	2699673	.	-	.	ID=gene2321;Name=sufC;Dbxref=GeneID:1175236;gbkey=Gene;gene=sufC;locus_tag=YPO2402
NC_003143.1	RefSeq	CDS	2698927	2699673	.	-	0	ID=cds2218;Name=YP_002347367.1;Parent=gene2321;Note=part of SUF system involved in inserting iron-sulfur clusters into proteins%3B in Escherichia coli this protein forms a complex with SufBD%3B the SufBCD complex stimulates the cysteine desulfurase SufS in conjunction with SufE;Dbxref=InterPro:IPR003439,InterPro:IPR003593,InterPro:IPR010230,UniProtKB%2FTrEMBL:Q0WEC1,Genbank:YP_002347367.1,GeneID:1175236;gbkey=CDS;gene=sufC;product=cysteine desulfurase;protein_id=YP_002347367.1;transl_table=11
NC_003143.1	RefSeq	region	2699194	2699238	.	-	.	ID=id1744;Note=PS00211 ABC transporters family signature.;Dbxref=GeneID:1175236;gbkey=misc_feature;gene=sufC
NC_003143.1	RefSeq	region	2699551	2699574	.	-	.	ID=id1745;Note=PS00017 ATP%2FGTP-binding site motif A %28P-loop%29.;Dbxref=GeneID:1175236;gbkey=misc_feature;gene=sufC
NC_003143.1	RefSeq	gene	2699859	2701370	.	-	.	ID=gene2322;Name=YPO2403;Dbxref=GeneID:1175237;gbkey=Gene;locus_tag=YPO2403
NC_003143.1	RefSeq	CDS	2699859	2701370	.	-	0	ID=cds2219;Name=YP_002347368.1;Parent=gene2322;Note=with SufCD activates cysteine desulfurase SufS;Dbxref=InterPro:IPR000825,InterPro:IPR010231,UniProtKB%2FTrEMBL:Q7CIT1,Genbank:YP_002347368.1,GeneID:1175237;gbkey=CDS;product=cysteine desulfurase;protein_id=YP_002347368.1;transl_table=11
NC_003143.1	RefSeq	gene	2701385	2701756	.	-	.	ID=gene2323;Name=sufA;Dbxref=GeneID:1175238;gbkey=Gene;gene=sufA;locus_tag=YPO2404
NC_003143.1	RefSeq	CDS	2701385	2701756	.	-	0	ID=cds2220;Name=YP_002347369.1;Parent=gene2323;Note=functions as a scaffold on which iron-sulfur clusters %28%5B2Fe-2S%5D%3B %5B4Fe-4S%5D%29 are assembled%3B forms a homodimer%3B similar to IscA protein;Dbxref=InterPro:IPR000361,InterPro:IPR011298,UniProtKB%2FTrEMBL:Q0WEB9,Genbank:YP_002347369.1,GeneID:1175238;gbkey=CDS;gene=sufA;product=iron-sulfur cluster assembly scaffold protein;protein_id=YP_002347369.1;transl_table=11
NC_003143.1	RefSeq	region	2701394	2701447	.	-	.	ID=id1746;Note=PS01152 Hypothetical hesB%2FyadR%2FyfhF family signature.;Dbxref=GeneID:1175238;gbkey=misc_feature;gene=sufA
NC_003143.1	RefSeq	ribosome_entry_site	2702097	2702100	.	-	.	ID=id1747;gbkey=RBS
NC_003143.1	RefSeq	gene	2702351	2702767	.	-	.	ID=gene2324;Name=YPO2406;Dbxref=GeneID:1175240;gbkey=Gene;locus_tag=YPO2406
NC_003143.1	RefSeq	CDS	2702351	2702767	.	-	0	ID=cds2221;Name=YP_002347371.1;Parent=gene2324;Dbxref=InterPro:IPR003736,InterPro:IPR006683,UniProtKB%2FTrEMBL:Q7CIT2,Genbank:YP_002347371.1,GeneID:1175240;gbkey=CDS;product=hypothetical protein;protein_id=YP_002347371.1;transl_table=11
NC_003143.1	RefSeq	ribosome_entry_site	2702775	2702780	.	-	.	ID=id1748;gbkey=RBS
NC_003143.1	RefSeq	gene	2702889	2705945	.	-	.	ID=gene2325;Name=YPO2407;Dbxref=GeneID:1175241;gbkey=Gene;locus_tag=YPO2407
NC_003143.1	RefSeq	CDS	2702889	2705945	.	-	0	ID=cds2222;Name=YP_002347372.1;Parent=gene2325;Dbxref=InterPro:IPR001450,InterPro:IPR004113,InterPro:IPR006094,InterPro:IPR009051,InterPro:IPR012285,UniProtKB%2FTrEMBL:Q7CIT3,Genbank:YP_002347372.1,GeneID:1175241;gbkey=CDS;product=hypothetical protein;protein_id=YP_002347372.1;transl_table=11
NC_003143.1	RefSeq	region	2703891	2703926	.	-	.	ID=id1749;Note=PS00198 4Fe-4S ferredoxins%2C iron-sulfur binding region signature.;Dbxref=GeneID:1175241;gbkey=misc_feature
NC_003143.1	RefSeq	region	2704743	2704772	.	-	.	ID=id1750;Note=PS00339 Aminoacyl-transfer RNA synthetases class-II signature 2.;Dbxref=GeneID:1175241;gbkey=misc_feature
NC_003143.1	RefSeq	region	2705427	2705450	.	-	.	ID=id1751;Note=PS00017 ATP%2FGTP-binding site motif A %28P-loop%29.;Dbxref=GeneID:1175241;gbkey=misc_feature
NC_003143.1	RefSeq	gene	2706566	2707669	.	+	.	ID=gene2326;Name=YPO2408;Dbxref=GeneID:1175242;gbkey=Gene;locus_tag=YPO2408
NC_003143.1	RefSeq	CDS	2706566	2707669	.	+	0	ID=cds2223;Name=YP_002347373.1;Parent=gene2326;Note=YdiK%3B inner membrane protein%3B ydiK promoter presents a PurR sequence%2C suggesting that its expression is purine-regulated%3B unknown function;Dbxref=InterPro:IPR002549,UniProtKB%2FTrEMBL:Q0WEB5,Genbank:YP_002347373.1,GeneID:1175242;gbkey=CDS;product=hypothetical protein;protein_id=YP_002347373.1;transl_table=11
NC_003143.1	RefSeq	gene	2708268	2710652	.	-	.	ID=gene2327;Name=ppsA;Dbxref=GeneID:1175243;gbkey=Gene;gene=ppsA;locus_tag=YPO2409
NC_003143.1	RefSeq	CDS	2708268	2710652	.	-	0	ID=cds2224;Name=YP_002347374.1;Parent=gene2327;Note=catalyzes the formation of phosphoenolpyruvate from pyruvate;Dbxref=InterPro:IPR000121,InterPro:IPR002192,InterPro:IPR006319,InterPro:IPR008279,InterPro:IPR013815,UniProtKB%2FTrEMBL:Q7CIT4,Genbank:YP_002347374.1,GeneID:1175243;gbkey=CDS;gene=ppsA;product=phosphoenolpyruvate synthase;protein_id=YP_002347374.1;transl_table=11
NC_003143.1	RefSeq	region	2708508	2708564	.	-	.	ID=id1752;Note=PS00742 PEP-utilizing enzymes signature 2.;Dbxref=GeneID:1175243;gbkey=misc_feature;gene=ppsA
NC_003143.1	RefSeq	region	2709369	2709404	.	-	.	ID=id1753;Note=PS00370 PEP-utilizing enzymes phosphorylation site signature.;Dbxref=GeneID:1175243;gbkey=misc_feature;gene=ppsA
NC_003143.1	RefSeq	ribosome_entry_site	2710661	2710666	.	-	.	ID=id1754;gbkey=RBS
NC_003143.1	RefSeq	ribosome_entry_site	2710978	2710983	.	+	.	ID=id1755;gbkey=RBS
NC_003143.1	RefSeq	gene	2710989	2711810	.	+	.	ID=gene2328;Name=YPO2410;Dbxref=GeneID:1175244;gbkey=Gene;locus_tag=YPO2410
NC_003143.1	RefSeq	CDS	2710989	2711810	.	+	0	ID=cds2225;Name=YP_002347375.1;Parent=gene2328;Dbxref=InterPro:IPR005177,InterPro:IPR008917,UniProtKB%2FTrEMBL:Q0WEB3,Genbank:YP_002347375.1,GeneID:1175244;gbkey=CDS;product=hypothetical protein;protein_id=YP_002347375.1;transl_table=11
NC_003143.1	RefSeq	region	2711445	2711468	.	+	.	ID=id1756;Note=PS00017 ATP%2FGTP-binding site motif A %28P-loop%29.;Dbxref=GeneID:1175244;gbkey=misc_feature
NC_003143.1	RefSeq	gene	2711967	2713013	.	+	.	ID=gene2329;Name=aroH;Dbxref=GeneID:1175245;gbkey=Gene;gene=aroH;locus_tag=YPO2411
NC_003143.1	RefSeq	CDS	2711967	2713013	.	+	0	ID=cds2226;Name=YP_002347376.1;Parent=gene2329;Note=tryptophan sensitive%3B catalyzes the formation of 3-deoxy-D-arabino-hept-2-ulosonate 7 phosphate from phosphoenolpyruvate and D-erythrose 4-phosphate;Dbxref=InterPro:IPR006218,InterPro:IPR006219,UniProtKB%2FTrEMBL:Q7CIT5,Genbank:YP_002347376.1,GeneID:1175245;gbkey=CDS;gene=aroH;product=phospho-2-dehydro-3-deoxyheptonate aldolase;protein_id=YP_002347376.1;transl_table=11
NC_003143.1	RefSeq	gene	2713182	2714645	.	-	.	ID=gene2330;Name=YPO2412;Dbxref=GeneID:1175246;gbkey=Gene;locus_tag=YPO2412;pseudo=true
NC_003143.1	RefSeq	region	2713182	2714645	.	-	.	ID=id1757;Note=Similar to Escherichia coli hypothetical protein YdiU SW:YDIU_ECOLI %28P77649%29 %28478 aa%29 fasta scores: E%28%29: 0%2C64.8%25 id in 477 aa%2C and to Vibrio cholerae hypothetical protein VC1931 TR:Q9KQR7 %28EMBL:AE004269%29 %28508 aa%29 fasta scores: E%28%29: 0%2C 49.6%25 id in 486 aa. There is a nonsense mutation %28ochre%29 at position 245. The sequence has been checked and is believed to be correct;Dbxref=GeneID:1175246;gbkey=misc_feature;pseudo=true
NC_003143.1	RefSeq	gene	2714697	2715713	.	-	.	ID=gene2331;Name=lplA;Dbxref=GeneID:1175247;gbkey=Gene;gene=lplA;locus_tag=YPO2414
NC_003143.1	RefSeq	CDS	2714697	2715713	.	-	0	ID=cds2227;Name=YP_002347377.1;Parent=gene2331;Note=Catalyzes both the ATP-dependent activation of exogenously supplied lipoate to lipoyl-AMP and the transfer of the activated lipoyl on the lipoate-dependent enzymes. Creates an amide linkage that joins the free carboxyl group of lipoic acid to the epsilon-amino group of a specific lysine residue in lipoyl domain of apoproteins;Dbxref=InterPro:IPR004143,InterPro:IPR004562,UniProtKB%2FTrEMBL:Q0WEB1,Genbank:YP_002347377.1,GeneID:1175247;gbkey=CDS;gene=lplA;product=lipoate-protein ligase A;protein_id=YP_002347377.1;transl_table=11
NC_003143.1	RefSeq	ribosome_entry_site	2715720	2715723	.	-	.	ID=id1758;gbkey=RBS
NC_003143.1	RefSeq	gene	2715838	2716302	.	-	.	ID=gene2332;Name=nlpC;Dbxref=GeneID:1175248;gbkey=Gene;gene=nlpC;locus_tag=YPO2415
NC_003143.1	RefSeq	CDS	2715838	2716302	.	-	0	ID=cds2228;Name=YP_002347378.1;Parent=gene2332;Dbxref=InterPro:IPR000064,InterPro:IPR010916,UniProtKB%2FTrEMBL:Q7CIT7,Genbank:YP_002347378.1,GeneID:1175248;gbkey=CDS;gene=nlpC;product=lipoprotein;protein_id=YP_002347378.1;transl_table=11
NC_003143.1	RefSeq	region	2716192	2716269	.	-	.	ID=id1759;Note=PS00430 TonB-dependent receptor proteins signature 1.;Dbxref=GeneID:1175248;gbkey=misc_feature;gene=nlpC
NC_003143.1	RefSeq	gene	2716582	2716968	.	-	.	ID=gene2333;Name=YPO2416;Dbxref=GeneID:1175249;gbkey=Gene;locus_tag=YPO2416
NC_003143.1	RefSeq	CDS	2716582	2716968	.	-	0	ID=cds2229;Name=YP_002347379.1;Parent=gene2333;Dbxref=Genbank:YP_002347379.1,GeneID:1175249;gbkey=CDS;product=hypothetical protein;protein_id=YP_002347379.1;transl_table=11
NC_003143.1	RefSeq	gene	2716965	2717309	.	-	.	ID=gene2334;Name=YPO2417;Dbxref=GeneID:1175250;gbkey=Gene;locus_tag=YPO2417
NC_003143.1	RefSeq	CDS	2716965	2717309	.	-	0	ID=cds2230;Name=YP_002347380.1;Parent=gene2334;Dbxref=InterPro:IPR000620,UniProtKB%2FTrEMBL:Q74TF8,Genbank:YP_002347380.1,GeneID:1175250;gbkey=CDS;product=hypothetical protein;protein_id=YP_002347380.1;transl_table=11
NC_003143.1	RefSeq	gene	2717306	2718970	.	-	.	ID=gene2335;Name=arnT;Dbxref=GeneID:1175251;gbkey=Gene;gene=arnT;locus_tag=YPO2418
NC_003143.1	RefSeq	CDS	2717306	2718970	.	-	0	ID=cds2231;Name=YP_002347381.1;Parent=gene2335;Note=catalyzes the addition of 4-amino-4-deoxy-L-arabinose to lipid A;Dbxref=InterPro:IPR003342,UniProtKB%2FTrEMBL:Q0WEA7,Genbank:YP_002347381.1,GeneID:1175251;gbkey=CDS;gene=arnT;product=4-amino-4-deoxy-L-arabinose transferase;protein_id=YP_002347381.1;transl_table=11
NC_003143.1	RefSeq	gene	2718967	2719872	.	-	.	ID=gene2336;Name=arnT;Dbxref=GeneID:1175252;gbkey=Gene;gene=arnT;locus_tag=YPO2419
NC_003143.1	RefSeq	CDS	2718967	2719872	.	-	0	ID=cds2232;Name=YP_002347382.1;Parent=gene2336;Dbxref=InterPro:IPR002509,UniProtKB%2FTrEMBL:Q7CIT9,Genbank:YP_002347382.1,GeneID:1175252;gbkey=CDS;product=hypothetical protein;protein_id=YP_002347382.1;transl_table=11
NC_003143.1	RefSeq	ribosome_entry_site	2718977	2718982	.	-	.	ID=id1760;Dbxref=GeneID:1175252;gbkey=RBS
NC_003143.1	RefSeq	gene	2719869	2721872	.	-	.	ID=gene2337;Name=YPO2420;Dbxref=GeneID:1175253;gbkey=Gene;locus_tag=YPO2420
NC_003143.1	RefSeq	CDS	2719869	2721872	.	-	0	ID=cds2233;Name=YP_002347383.1;Parent=gene2337;Note=Bifunctional polymyxin resistance arnA protein%3B catalyzes the decarboxylation of UDP-glucuronic acid to UDP-4-keto-arabinose and the addition of a formyl group to UDP-4-amino-4-deoxy-L-arabinose to form UDP-L-4-formamido-arabinose%3B active in certain mutant strains;Dbxref=InterPro:IPR001509,InterPro:IPR002376,InterPro:IPR005793,InterPro:IPR011034,UniProtKB%2FTrEMBL:Q0WEA5,Genbank:YP_002347383.1,GeneID:1175253;gbkey=CDS;product=bifunctional UDP-glucuronic acid decarboxylase%2FUDP-4-amino-4-deoxy-L-arabinose formyltransferase;protein_id=YP_002347383.1;transl_table=11
NC_003143.1	RefSeq	gene	2721869	2722852	.	-	.	ID=gene2338;Name=pmrF;Dbxref=GeneID:1175254;gbkey=Gene;gene=pmrF;locus_tag=YPO2421
NC_003143.1	RefSeq	CDS	2721869	2722852	.	-	0	ID=cds2234;Name=YP_002347384.1;Parent=gene2338;Note=catalyzes the transfer of 4-deoxy-4-formamido-L-arabinose from UDP to undecaprenyl phosphate;Dbxref=InterPro:IPR001173,UniProtKB%2FTrEMBL:Q0WEA4,Genbank:YP_002347384.1,GeneID:1175254;gbkey=CDS;gene=pmrF;product=undecaprenyl phosphate 4-deoxy-4-formamido-L-arabinose transferase;protein_id=YP_002347384.1;transl_table=11
NC_003143.1	RefSeq	gene	2722839	2723993	.	-	.	ID=gene2339;Name=pmrF;Dbxref=GeneID:1175255;gbkey=Gene;gene=pmrF;locus_tag=YPO2422
NC_003143.1	RefSeq	CDS	2722839	2723993	.	-	0	ID=cds2235;Name=YP_002347385.1;Parent=gene2339;Note=catalyzes the conversion of UDP-4-keto-arabinose to UDP-4-amino-4-deoxy-L-arabinose;Dbxref=InterPro:IPR000653,UniProtKB%2FTrEMBL:Q0WEA3,Genbank:YP_002347385.1,GeneID:1175255;gbkey=CDS;product=UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase;protein_id=YP_002347385.1;transl_table=11
NC_003143.1	RefSeq	gene	2724343	2725104	.	-	.	ID=gene2340;Name=btuD;Dbxref=GeneID:1175256;gbkey=Gene;gene=btuD;locus_tag=YPO2423
NC_003143.1	RefSeq	CDS	2724343	2725104	.	-	0	ID=cds2236;Name=YP_002347386.1;Parent=gene2340;Note=ATP-binding protein that acts with the transmembrane protein BtuC and the solute binding protein BtuF to transport vitamin B12 into the cell;Dbxref=InterPro:IPR003439,InterPro:IPR003593,UniProtKB%2FTrEMBL:Q0WEA2,Genbank:YP_002347386.1,GeneID:1175256;gbkey=CDS;gene=btuD;product=vitamin B12-transporter ATPase;protein_id=YP_002347386.1;transl_table=11
NC_003143.1	RefSeq	region	2724673	2724717	.	-	.	ID=id1761;Note=PS00211 ABC transporters family signature.;Dbxref=GeneID:1175256;gbkey=misc_feature;gene=btuD
NC_003143.1	RefSeq	region	2724988	2725011	.	-	.	ID=id1762;Note=PS00017 ATP%2FGTP-binding site motif A %28P-loop%29.;Dbxref=GeneID:1175256;gbkey=misc_feature;gene=btuD
NC_003143.1	RefSeq	gene	2725126	2725680	.	-	.	ID=gene2341;Name=btuE;Dbxref=GeneID:1175257;gbkey=Gene;gene=btuE;locus_tag=YPO2424
NC_003143.1	RefSeq	CDS	2725126	2725680	.	-	0	ID=cds2237;Name=YP_002347387.1;Parent=gene2341;Note=similar to glutathione peroxidase%3B member of the btuCED operon which is required for vitamin B12 transport across the inner membrane;Dbxref=InterPro:IPR000889,InterPro:IPR012335,InterPro:IPR012336,UniProtKB%2FTrEMBL:Q7CIU3,Genbank:YP_002347387.1,GeneID:1175257;gbkey=CDS;gene=btuE;product=glutathione peroxidase;protein_id=YP_002347387.1;transl_table=11
NC_003143.1	RefSeq	ribosome_entry_site	2725690	2725694	.	-	.	ID=id1763;gbkey=RBS
NC_003143.1	RefSeq	gene	2725750	2726757	.	-	.	ID=gene2342;Name=btuC;Dbxref=GeneID:1175258;gbkey=Gene;gene=btuC;locus_tag=YPO2425
NC_003143.1	RefSeq	CDS	2725750	2726757	.	-	0	ID=cds2238;Name=YP_002347388.1;Parent=gene2342;Note=with BtuD and BtuF transports vitamin B12 into the cell;Dbxref=InterPro:IPR000522,Genbank:YP_002347388.1,GeneID:1175258;gbkey=CDS;gene=btuC;product=vtamin B12-transporter permease;protein_id=YP_002347388.1;transl_table=11
NC_003143.1	RefSeq	ribosome_entry_site	2726763	2726766	.	-	.	ID=id1764;gbkey=RBS
NC_003143.1	RefSeq	gene	2726984	2727442	.	-	.	ID=gene2343;Name=YPO2426;Dbxref=GeneID:1175259;gbkey=Gene;locus_tag=YPO2426
NC_003143.1	RefSeq	CDS	2726984	2727442	.	-	0	ID=cds2239;Name=YP_002347389.1;Parent=gene2343;Dbxref=UniProtKB%2FTrEMBL:Q7CIU4,Genbank:YP_002347389.1,GeneID:1175259;gbkey=CDS;product=hypothetical protein;protein_id=YP_002347389.1;transl_table=11
NC_003143.1	RefSeq	gene	2727776	2728072	.	-	.	ID=gene2344;Name=ihfA;Dbxref=GeneID:1175260;gbkey=Gene;gene=ihfA;gene_synonym=himA,ihfA;locus_tag=YPO2427
NC_003143.1	RefSeq	CDS	2727776	2728072	.	-	0	ID=cds2240;Name=YP_002347390.1;Parent=gene2344;Note=This protein is one of the two subunits of integration host factor%2C a specific DNA-binding protein that functions in genetic recombination as well as in transcriptional and translational control;Dbxref=InterPro:IPR000119,InterPro:IPR005684,InterPro:IPR010992,UniProtKB%2FTrEMBL:Q0WE98,Genbank:YP_002347390.1,GeneID:1175260;gbkey=CDS;gene=ihfA;product=integration host factor subunit alpha;protein_id=YP_002347390.1;transl_table=11
NC_003143.1	RefSeq	region	2727872	2727931	.	-	.	ID=id1765;Note=PS00045 Bacterial histone-like DNA-binding proteins signature.;Dbxref=GeneID:1175260;gbkey=misc_feature;gene=ihfA
NC_003143.1	RefSeq	gene	2728077	2730464	.	-	.	ID=gene2345;Name=pheT;Dbxref=GeneID:1175261;gbkey=Gene;gene=pheT;locus_tag=YPO2428
NC_003143.1	RefSeq	CDS	2728077	2730464	.	-	0	ID=cds2241;Name=YP_002347391.1;Parent=gene2345;Note=catalyzes a two-step reaction%2C first charging a phenylalanine molecule by linking its carboxyl group to the alpha-phosphate of ATP%2C followed by transfer of the aminoacyl-adenylate to its tRNA%3B forms a tetramer of alpha%282%29beta%282%29%3B binds two magnesium ions per tetramer%3B type 2 subfamily;Dbxref=InterPro:IPR002547,InterPro:IPR004532,InterPro:IPR005121,InterPro:IPR005146,InterPro:IPR005147,InterPro:IPR008994,InterPro:IPR009061,InterPro:IPR012340,UniProtKB%2FTrEMBL:Q0WE97,Genbank:YP_002347391.1,GeneID:1175261;gbkey=CDS;gene=pheT;product=phenylalanyl-tRNA synthetase subunit beta;protein_id=YP_002347391.1;transl_table=11
NC_003143.1	RefSeq	ribosome_entry_site	2728083	2728086	.	-	.	ID=id1766;Dbxref=GeneID:1175261;gbkey=RBS;gene=pheT
NC_003143.1	RefSeq	ribosome_entry_site	2730471	2730475	.	-	.	ID=id1767;gbkey=RBS
NC_003143.1	RefSeq	gene	2730478	2731461	.	-	.	ID=gene2346;Name=pheS;Dbxref=GeneID:1175262;gbkey=Gene;gene=pheS;locus_tag=YPO2429
NC_003143.1	RefSeq	CDS	2730478	2731461	.	-	0	ID=cds2242;Name=YP_002347392.1;Parent=gene2346;Note=catalyzes a two-step reaction%2C first charging a phenylalanine molecule by linking its carboxyl group to the alpha-phosphate of ATP%2C followed by transfer of the aminoacyl-adenylate to its tRNA%3B forms a heterotetramer of alpha%282%29beta%282%29%3B binds two magnesium ions per tetramer%3B type 1 subfamily;Dbxref=InterPro:IPR002319,InterPro:IPR004188,InterPro:IPR004529,InterPro:IPR006195,InterPro:IPR010978,UniProtKB%2FTrEMBL:Q0WE96,Genbank:YP_002347392.1,GeneID:1175262;gbkey=CDS;gene=pheS;product=phenylalanyl-tRNA synthetase subunit alpha;protein_id=YP_002347392.1;transl_table=11
NC_003143.1	RefSeq	region	2730547	2730576	.	-	.	ID=id1768;Note=PS00339 Aminoacyl-transfer RNA synthetases class-II signature 2.;Dbxref=GeneID:1175262;gbkey=misc_feature;gene=pheS
NC_003143.1	RefSeq	region	2730832	2730882	.	-	.	ID=id1769;Note=PS00179 Aminoacyl-transfer RNA synthetases class-II signature 1.;Dbxref=GeneID:1175262;gbkey=misc_feature;gene=pheS
NC_003143.1	RefSeq	ribosome_entry_site	2731473	2731476	.	-	.	ID=id1770;gbkey=RBS
NC_003143.1	RefSeq	gene	2731960	2732316	.	-	.	ID=gene2347;Name=rplT;Dbxref=GeneID:1175264;gbkey=Gene;gene=rplT;locus_tag=YPO2430
NC_003143.1	RefSeq	CDS	2731960	2732316	.	-	0	ID=cds2243;Name=YP_002347394.1;Parent=gene2347;Note=binds directly to 23S ribosomal RNA prior to in vitro assembly of the 50S ribosomal subunit;Dbxref=InterPro:IPR005812,InterPro:IPR005813,UniProtKB%2FTrEMBL:Q0WE94,Genbank:YP_002347394.1,GeneID:1175264;gbkey=CDS;gene=rplT;product=50S ribosomal protein L20;protein_id=YP_002347394.1;transl_table=11
NC_003143.1	RefSeq	region	2732107	2732157	.	-	.	ID=id1771;Note=PS00937 Ribosomal protein L20 signature.;Dbxref=GeneID:1175264;gbkey=misc_feature;gene=rplT
NC_003143.1	RefSeq	ribosome_entry_site	2732323	2732327	.	-	.	ID=id1772;gbkey=RBS
NC_003143.1	RefSeq	gene	2732354	2732551	.	-	.	ID=gene2348;Name=rpmI;Dbxref=GeneID:1175265;gbkey=Gene;gene=rpmI;locus_tag=YPO2431
NC_003143.1	RefSeq	CDS	2732354	2732551	.	-	0	ID=cds2244;Name=YP_002347395.1;Parent=gene2348;Dbxref=InterPro:IPR001706,UniProtKB%2FTrEMBL:Q0WE93,Genbank:YP_002347395.1,GeneID:1175265;gbkey=CDS;gene=rpmI;product=50S ribosomal protein L35;protein_id=YP_002347395.1;transl_table=11
NC_003143.1	RefSeq	region	2732507	2732542	.	-	.	ID=id1773;Note=PS00936 Ribosomal protein L35 signature.;Dbxref=GeneID:1175265;gbkey=misc_feature;gene=rpmI
NC_003143.1	RefSeq	gene	2732648	2733199	.	-	.	ID=gene2349;Name=infC;Dbxref=GeneID:1175266;gbkey=Gene;gene=infC;locus_tag=YPO2432
NC_003143.1	RefSeq	CDS	2732648	2733199	.	-	0	ID=cds2245;Name=YP_002347396.1;Parent=gene2349;Note=IF-3 has several functions that are required and promote translation initiation including%3B preventing association of 70S by binding to 30S%3B monitoring codon-anticodon interactions by promoting disassociation of fMet-tRNA%28fMet%29 from initiation complexes formed on leaderless mRNAs or incorrectly bound noninitiatior tRNAs and complexes with noncanonical start sites%3B stimulates codon-anticodon interactions at P-site%3B involved in moving mRNA to the P-site%3B and in recycling subunits;Dbxref=InterPro:IPR001288,UniProtKB%2FTrEMBL:Q0WE92,Genbank:YP_002347396.1,GeneID:1175266;gbkey=CDS;gene=infC;product=translation initiation factor IF-3;protein_id=YP_002347396.1;transl_table=11
NC_003143.1	RefSeq	gene	2733203	2735131	.	-	.	ID=gene2350;Name=thrS;Dbxref=GeneID:1175267;gbkey=Gene;gene=thrS;locus_tag=YPO2433
NC_003143.1	RefSeq	CDS	2733203	2735131	.	-	0	ID=cds2246;Name=YP_002347397.1;Parent=gene2350;Note=catalyzes the formation of threonyl-tRNA%28Thr%29 from threonine and tRNA%28Thr%29%3B catalyzes a two-step reaction%2C first charging a threonine molecule by linking its carboxyl group to the alpha-phosphate of ATP%2C followed by transfer of the aminoacyl-adenylate to its tRNA;Dbxref=InterPro:IPR002314,InterPro:IPR002320,InterPro:IPR004095,InterPro:IPR004154,InterPro:IPR006195,InterPro:IPR012675,InterPro:IPR012676,InterPro:IPR012947,UniProtKB%2FTrEMBL:Q0WE91,Genbank:YP_002347397.1,GeneID:1175267;gbkey=CDS;gene=thrS;product=threonyl-tRNA synthetase;protein_id=YP_002347397.1;transl_table=11
NC_003143.1	RefSeq	ribosome_entry_site	2733208	2733212	.	-	.	ID=id1774;Dbxref=GeneID:1175267;gbkey=RBS;gene=thrS
NC_003143.1	RefSeq	region	2733560	2733589	.	-	.	ID=id1775;Note=PS00339 Aminoacyl-transfer RNA synthetases class-II signature 2.;Dbxref=GeneID:1175267;gbkey=misc_feature;gene=thrS
NC_003143.1	RefSeq	region	2733983	2734048	.	-	.	ID=id1776;Note=PS00179 Aminoacyl-transfer RNA synthetases class-II signature 1.;Dbxref=GeneID:1175267;gbkey=misc_feature;gene=thrS
NC_003143.1	RefSeq	ribosome_entry_site	2735138	2735142	.	-	.	ID=id1777;gbkey=RBS
NC_003143.1	RefSeq	ribosome_entry_site	2735510	2735513	.	+	.	ID=id1778;gbkey=RBS
NC_003143.1	RefSeq	gene	2735522	2735734	.	+	.	ID=gene2351;Name=YPO2434;Dbxref=GeneID:1175268;gbkey=Gene;locus_tag=YPO2434
NC_003143.1	RefSeq	CDS	2735522	2735734	.	+	0	ID=cds2247;Name=YP_002347398.1;Parent=gene2351;Dbxref=UniProtKB%2FTrEMBL:Q7CIU6,Genbank:YP_002347398.1,GeneID:1175268;gbkey=CDS;product=hypothetical protein;protein_id=YP_002347398.1;transl_table=11
NC_003143.1	RefSeq	gene	2736493	2736807	.	-	.	ID=gene2352;Name=YPO2436;Dbxref=GeneID:1175270;gbkey=Gene;locus_tag=YPO2436
NC_003143.1	RefSeq	CDS	2736493	2736807	.	-	0	ID=cds2248;Name=YP_002347400.1;Parent=gene2352;Note=No significant database hits;Dbxref=UniProtKB%2FTrEMBL:Q0WE88,Genbank:YP_002347400.1,GeneID:1175270;gbkey=CDS;product=hypothetical protein;protein_id=YP_002347400.1;transl_table=11
NC_003143.1	RefSeq	ribosome_entry_site	2737051	2737054	.	+	.	ID=id1779;gbkey=RBS
NC_003143.1	RefSeq	gene	2737063	2737746	.	+	.	ID=gene2353;Name=marC;Dbxref=GeneID:1175271;gbkey=Gene;gene=marC;locus_tag=YPO2437
NC_003143.1	RefSeq	CDS	2737063	2737746	.	+	0	ID=cds2249;Name=YP_002347401.1;Parent=gene2353;Note=protein involved in resistance to different drugs %28tetracycline%2C chloramphenicol%2C beta-lactams%2C and quinolones%29%3B part of the multiple antibiotic resistance %28mar%29 locus%2C which is composed by the genes marC and marRAB%3B unknown function;Dbxref=InterPro:IPR002771,UniProtKB%2FTrEMBL:Q74TE6,Genbank:YP_002347401.1,GeneID:1175271;gbkey=CDS;gene=marC;product=multiple drug resistance protein MarC;protein_id=YP_002347401.1;transl_table=11
NC_003143.1	RefSeq	gene	2737868	2738530	.	-	.	ID=gene2354;Name=YPO2438;Dbxref=GeneID:1175272;gbkey=Gene;locus_tag=YPO2438
NC_003143.1	RefSeq	CDS	2737868	2738530	.	-	0	ID=cds2250;Name=YP_002347402.1;Parent=gene2354;Dbxref=InterPro:IPR000189,InterPro:IPR008258,UniProtKB%2FTrEMBL:Q7CIU7,Genbank:YP_002347402.1,GeneID:1175272;gbkey=CDS;product=membrane-bound lytic murein transglycosylase;protein_id=YP_002347402.1;transl_table=11
NC_003143.1	RefSeq	region	2738222	2738308	.	-	.	ID=id1780;Note=PS00922 Prokaryotic transglycosylases signature.;Dbxref=GeneID:1175272;gbkey=misc_feature
NC_003143.1	RefSeq	region	2738480	2738512	.	-	.	ID=id1781;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site.;Dbxref=GeneID:1175272;gbkey=misc_feature
NC_003143.1	RefSeq	gene	2738739	2739710	.	+	.	ID=gene2355;Name=yfeA;Dbxref=GeneID:1175273;gbkey=Gene;gene=yfeA;locus_tag=YPO2439
NC_003143.1	RefSeq	CDS	2738739	2739710	.	+	0	ID=cds2251;Name=YP_002347403.1;Parent=gene2355;Dbxref=InterPro:IPR006127,InterPro:IPR006128,InterPro:IPR006129,UniProtKB%2FTrEMBL:Q0WE85,Genbank:YP_002347403.1,GeneID:1175273;gbkey=CDS;gene=yfeA;product=substrate-binding protein;protein_id=YP_002347403.1;transl_table=11
NC_003143.1	RefSeq	gene	2739707	2740597	.	+	.	ID=gene2356;Name=yfeB;Dbxref=GeneID:1175274;gbkey=Gene;gene=yfeB;locus_tag=YPO2440
NC_003143.1	RefSeq	CDS	2739707	2740597	.	+	0	ID=cds2252;Name=YP_002347404.1;Parent=gene2356;Dbxref=InterPro:IPR003439,InterPro:IPR003593,UniProtKB%2FTrEMBL:Q0WE84,Genbank:YP_002347404.1,GeneID:1175274;gbkey=CDS;gene=yfeB;product=ATP-binding transport protein;protein_id=YP_002347404.1;transl_table=11
NC_003143.1	RefSeq	region	2739836	2739859	.	+	.	ID=id1782;Note=PS00017 ATP%2FGTP-binding site motif A %28P-loop%29.;Dbxref=GeneID:1175274;gbkey=misc_feature;gene=yfeB
NC_003143.1	RefSeq	region	2740145	2740189	.	+	.	ID=id1783;Note=PS00211 ABC transporters family signature.;Dbxref=GeneID:1175274;gbkey=misc_feature;gene=yfeB
NC_003143.1	RefSeq	ribosome_entry_site	2740579	2740585	.	+	.	ID=id1784;Dbxref=GeneID:1175274;gbkey=RBS;gene=yfeB
NC_003143.1	RefSeq	gene	2740597	2741481	.	+	.	ID=gene2357;Name=yfeC;Dbxref=GeneID:1175275;gbkey=Gene;gene=yfeC;locus_tag=YPO2441
NC_003143.1	RefSeq	CDS	2740597	2741481	.	+	0	ID=cds2253;Name=YP_002347405.1;Parent=gene2357;Dbxref=InterPro:IPR001626,UniProtKB%2FTrEMBL:Q0WE83,Genbank:YP_002347405.1,GeneID:1175275;gbkey=CDS;gene=yfeC;product=chelated iron transport system membrane protein;protein_id=YP_002347405.1;transl_table=11
NC_003143.1	RefSeq	ribosome_entry_site	2741466	2741470	.	+	.	ID=id1785;Dbxref=GeneID:1175275;gbkey=RBS;gene=yfeC
NC_003143.1	RefSeq	gene	2741478	2742371	.	+	.	ID=gene2358;Name=yfeD;Dbxref=GeneID:1175276;gbkey=Gene;gene=yfeD;locus_tag=YPO2442
NC_003143.1	RefSeq	CDS	2741478	2742371	.	+	0	ID=cds2254;Name=YP_002347406.1;Parent=gene2358;Dbxref=InterPro:IPR001626,UniProtKB%2FTrEMBL:Q0WE82,Genbank:YP_002347406.1,GeneID:1175276;gbkey=CDS;gene=yfeD;product=chelated iron transport system membrane protein;protein_id=YP_002347406.1;transl_table=11
NC_003143.1	RefSeq	region	2742520	2742588	.	+	.	ID=id1786;Note=1 probable transmembrane helix predicted;gbkey=misc_feature
NC_003143.1	RefSeq	gene	2742676	2743551	.	+	.	ID=gene2359;Name=YPO2444;Dbxref=GeneID:1175278;gbkey=Gene;locus_tag=YPO2444
NC_003143.1	RefSeq	CDS	2742676	2743551	.	+	0	ID=cds2255;Name=YP_002347408.1;Parent=gene2359;Dbxref=InterPro:IPR002575,InterPro:IPR011009,UniProtKB%2FTrEMBL:Q7CIU9,Genbank:YP_002347408.1,GeneID:1175278;gbkey=CDS;product=hypothetical protein;protein_id=YP_002347408.1;transl_table=11
NC_003143.1	RefSeq	gene	2743680	2744234	.	-	.	ID=gene2360;Name=yfeE;Dbxref=GeneID:1175279;gbkey=Gene;gene=yfeE;locus_tag=YPO2445
NC_003143.1	RefSeq	CDS	2743680	2744234	.	-	0	ID=cds2256;Name=YP_002347409.1;Parent=gene2360;Dbxref=UniProtKB%2FTrEMBL:Q0WE79,Genbank:YP_002347409.1,GeneID:1175279;gbkey=CDS;gene=yfeE;product=yfeABCD locus regulator;protein_id=YP_002347409.1;transl_table=11
NC_003143.1	RefSeq	ribosome_entry_site	2744240	2744245	.	-	.	ID=id1787;gbkey=RBS
NC_003143.1	RefSeq	gene	2744645	2745310	.	+	.	ID=gene2361;Name=YPO2446;Dbxref=GeneID:1175280;gbkey=Gene;locus_tag=YPO2446
NC_003143.1	RefSeq	CDS	2744645	2745310	.	+	0	ID=cds2257;Name=YP_002347410.1;Parent=gene2361;Note=YniC%3B catalyzes the dephosphorylation of 2-deoxyglucose 6-phosphate%2C mannose 6-phosphate and p-nitrophenyl phosphate;Dbxref=InterPro:IPR005833,InterPro:IPR005834,InterPro:IPR006402,UniProtKB%2FTrEMBL:Q0WE78,Genbank:YP_002347410.1,GeneID:1175280;gbkey=CDS;product=2-deoxyglucose-6-phosphatase;protein_id=YP_002347410.1;transl_table=11
NC_003143.1	RefSeq	repeat_region	2745526	2746840	.	-	.	ID=id1788;Note=insertion sequence:IS285;gbkey=repeat_region
NC_003143.1	RefSeq	repeat_region	2745526	2745554	.	+	.	ID=id1789;Note=IS285 inverted repeat;gbkey=repeat_region
NC_003143.1	RefSeq	gene	2745561	2746769	.	-	.	ID=gene2362;Name=y1062;Dbxref=GeneID:1175281;gbkey=Gene;gene=y1062;gene_synonym=ypmt1.80C;locus_tag=YPO2447
NC_003143.1	RefSeq	CDS	2745561	2746769	.	-	0	ID=cds2258;Name=YP_002347411.1;Parent=gene2362;Dbxref=InterPro:IPR001207,UniProtKB%2FTrEMBL:Q7ARB0,Genbank:YP_002347411.1,GeneID:1175281;gbkey=CDS;gene=y1062;product=transposase for the IS285 insertion element;protein_id=YP_002347411.1;transl_table=11
NC_003143.1	RefSeq	region	2746002	2746076	.	-	.	ID=id1790;Note=PS01007 Transposases%2C Mutator family%2C signature.;Dbxref=GeneID:1175281;gbkey=misc_feature;gene=y1062
NC_003143.1	RefSeq	repeat_region	2746812	2746840	.	-	.	ID=id1791;Note=IS285 inverted repeat;gbkey=repeat_region
NC_003143.1	RefSeq	gene	2747130	2748245	.	+	.	ID=gene2363;Name=solA;Dbxref=GeneID:1175282;gbkey=Gene;gene=solA;gene_synonym=soxA;locus_tag=YPO2448
NC_003143.1	RefSeq	CDS	2747130	2748245	.	+	0	ID=cds2259;Name=YP_002347412.1;Parent=gene2363;Note=catalyzes the demethylation of N-methyl-L-tryptophan forming L-tryptophan and formaldehyde%3B FAD-binding%3B can also catalyze the demethylation of other N-methyl amino acids;Dbxref=InterPro:IPR002035,InterPro:IPR006076,UniProtKB%2FTrEMBL:Q0WE76,Genbank:YP_002347412.1,GeneID:1175282;gbkey=CDS;gene=solA;product=N-methyltryptophan oxidase;protein_id=YP_002347412.1;transl_table=11
NC_003143.1	RefSeq	gene	2748512	2749126	.	+	.	ID=gene2364;Name=YPO2449;Dbxref=GeneID:1175283;gbkey=Gene;locus_tag=YPO2449
NC_003143.1	RefSeq	CDS	2748512	2749126	.	+	0	ID=cds2260;Name=YP_002347413.1;Parent=gene2364;Dbxref=InterPro:IPR000792,InterPro:IPR011006,InterPro:IPR011991,UniProtKB%2FTrEMBL:Q0WE75,Genbank:YP_002347413.1,GeneID:1175283;gbkey=CDS;product=LuxR family transcriptional regulator;protein_id=YP_002347413.1;transl_table=11
NC_003143.1	RefSeq	repeat_region	2748784	2748843	.	+	.	ID=id1792;Note=repeat region with 2xGCCTATTCCTCTGACAGAATCCGTATCAAT repeat.;Dbxref=GeneID:1175283;gbkey=repeat_region
NC_003143.1	RefSeq	region	2748983	2749048	.	+	.	ID=id1793;Note=Predicted helix-turn-helix motif with score 1791 %28%2B5.29 SD%29 at aa 158-179%2C sequence MPNYRIARKLNISGSTVYSHKR;Dbxref=GeneID:1175283;gbkey=misc_feature
NC_003143.1	RefSeq	gene	2749698	2750756	.	-	.	ID=gene2365;Name=tqsA;Dbxref=GeneID:1175284;gbkey=Gene;gene=tqsA;locus_tag=YPO2450
NC_003143.1	RefSeq	CDS	2749698	2750756	.	-	0	ID=cds2261;Name=YP_002347414.1;Parent=gene2365;Note=transport of quorum-sensing signal%3B mutations in this gene alters the transport of the quorum-sensing signal autoinducer 2 %28AI-2%29 which affects expression of a large number of genes;Dbxref=InterPro:IPR002549,UniProtKB%2FTrEMBL:Q74TB8,Genbank:YP_002347414.1,GeneID:1175284;gbkey=CDS;gene=tqsA;product=transport protein;protein_id=YP_002347414.1;transl_table=11
NC_003143.1	RefSeq	gene	2750905	2751972	.	-	.	ID=gene2366;Name=YPO2451;Dbxref=GeneID:1175285;gbkey=Gene;locus_tag=YPO2451
NC_003143.1	RefSeq	CDS	2750905	2751972	.	-	0	ID=cds2262;Name=YP_002347415.1;Parent=gene2366;Dbxref=InterPro:IPR001763,UniProtKB%2FTrEMBL:Q0WE73,Genbank:YP_002347415.1,GeneID:1175285;gbkey=CDS;product=hypothetical protein;protein_id=YP_002347415.1;transl_table=11
NC_003143.1	RefSeq	region	2751658	2751681	.	-	.	ID=id1794;Note=PS00017 ATP%2FGTP-binding site motif A %28P-loop%29.;Dbxref=GeneID:1175285;gbkey=misc_feature
NC_003143.1	RefSeq	gene	2752016	2752144	.	-	.	ID=gene2367;Name=YPO2452;Dbxref=GeneID:1175286;gbkey=Gene;locus_tag=YPO2452
NC_003143.1	RefSeq	CDS	2752016	2752144	.	-	0	ID=cds2263;Name=YP_002347416.1;Parent=gene2367;Note=No significant database hits. Doubtful CDS;Dbxref=UniProtKB%2FTrEMBL:Q0WE72,Genbank:YP_002347416.1,GeneID:1175286;gbkey=CDS;product=hypothetical protein;protein_id=YP_002347416.1;transl_table=11
NC_003143.1	RefSeq	gene	2753023	2753721	.	-	.	ID=gene2368;Name=YPO2455;Dbxref=GeneID:1175289;gbkey=Gene;locus_tag=YPO2455
NC_003143.1	RefSeq	CDS	2753023	2753721	.	-	0	ID=cds2264;Name=YP_002347419.1;Parent=gene2368;Dbxref=InterPro:IPR000620,UniProtKB%2FTrEMBL:Q7CJ30,Genbank:YP_002347419.1,GeneID:1175289;gbkey=CDS;product=hypothetical protein;protein_id=YP_002347419.1;transl_table=11
NC_003143.1	RefSeq	gene	2754119	2754775	.	+	.	ID=gene2369;Name=ypeI;Dbxref=GeneID:1175290;gbkey=Gene;gene=ypeI;locus_tag=YPO2456
NC_003143.1	RefSeq	CDS	2754119	2754775	.	+	0	ID=cds2265;Name=YP_002347420.1;Parent=gene2369;Dbxref=InterPro:IPR001690,UniProtKB%2FTrEMBL:Q7CJ31,Genbank:YP_002347420.1,GeneID:1175290;gbkey=CDS;gene=ypeI;product=N-acylhomoserine lactone synthase;protein_id=YP_002347420.1;transl_table=11
NC_003143.1	RefSeq	region	2754197	2754274	.	+	.	ID=id1795;Note=PS00949 Autoinducers synthetases family signature.;Dbxref=GeneID:1175290;gbkey=misc_feature;gene=ypeI
NC_003143.1	RefSeq	gene	2754768	2755505	.	-	.	ID=gene2370;Name=ypeR;Dbxref=GeneID:1175291;gbkey=Gene;gene=ypeR;locus_tag=YPO2457
NC_003143.1	RefSeq	CDS	2754768	2755505	.	-	0	ID=cds2266;Name=YP_002347421.1;Parent=gene2370;Dbxref=InterPro:IPR000792,InterPro:IPR005143,InterPro:IPR011991,UniProtKB%2FTrEMBL:Q9RH45,Genbank:YP_002347421.1,GeneID:1175291;gbkey=CDS;gene=ypeR;product=quorum-sensing transcriptional activator YpeR;protein_id=YP_002347421.1;transl_table=11
NC_003143.1	RefSeq	region	2754837	2754920	.	-	.	ID=id1796;Note=PS00622 Bacterial regulatory proteins%2C luxR family signature.;Dbxref=GeneID:1175291;gbkey=misc_feature;gene=ypeR
NC_003143.1	RefSeq	region	2754852	2754917	.	-	.	ID=id1797;Note=Predicted helix-turn-helix motif with score 1682 %28%2B4.92 SD%29 at aa 197-218%2C sequence KTYSEIAIILGIKKSTVKFHIG;Dbxref=GeneID:1175291;gbkey=misc_feature;gene=ypeR
NC_003143.1	RefSeq	gene	2755992	2756972	.	-	.	ID=gene2371;Name=YPO2458;Dbxref=GeneID:1175292;gbkey=Gene;locus_tag=YPO2458
NC_003143.1	RefSeq	CDS	2755992	2756972	.	-	0	ID=cds2267;Name=YP_002347422.1;Parent=gene2371;Dbxref=InterPro:IPR000847,InterPro:IPR005119,InterPro:IPR011991,UniProtKB%2FTrEMBL:Q7CJ33,Genbank:YP_002347422.1,GeneID:1175292;gbkey=CDS;product=LysR family transcriptional regulator;protein_id=YP_002347422.1;transl_table=11
NC_003143.1	RefSeq	region	2756766	2756858	.	-	.	ID=id1798;Note=PS00044 Bacterial regulatory proteins%2C lysR family signature.;Dbxref=GeneID:1175292;gbkey=misc_feature
NC_003143.1	RefSeq	region	2756796	2756861	.	-	.	ID=id1799;Note=Predicted helix-turn-helix motif with score 1875 %28%2B5.57 SD%29 at aa 38-59%2C sequence LSFSKAAEALFMTQSAASRQIK;Dbxref=GeneID:1175292;gbkey=misc_feature
NC_003143.1	RefSeq	ribosome_entry_site	2757354	2757357	.	+	.	ID=id1800;gbkey=RBS
NC_003143.1	RefSeq	gene	2757366	2758724	.	+	.	ID=gene2372;Name=YPO2459;Dbxref=GeneID:1175293;gbkey=Gene;locus_tag=YPO2459
NC_003143.1	RefSeq	CDS	2757366	2758724	.	+	0	ID=cds2268;Name=YP_002347423.1;Parent=gene2372;Dbxref=InterPro:IPR005828,InterPro:IPR005829,InterPro:IPR007114,UniProtKB%2FTrEMBL:Q7CJ34,Genbank:YP_002347423.1,GeneID:1175293;gbkey=CDS;product=transporter protein;protein_id=YP_002347423.1;transl_table=11
NC_003143.1	RefSeq	region	2757720	2757797	.	+	.	ID=id1801;Note=PS00217 Sugar transport proteins signature 2.;Dbxref=GeneID:1175293;gbkey=misc_feature
NC_003143.1	RefSeq	ribosome_entry_site	2758759	2758764	.	+	.	ID=id1802;gbkey=RBS
NC_003143.1	RefSeq	gene	2758771	2759274	.	+	.	ID=gene2373;Name=YPO2460;Dbxref=GeneID:1175294;gbkey=Gene;locus_tag=YPO2460
NC_003143.1	RefSeq	CDS	2758771	2759274	.	+	0	ID=cds2269;Name=YP_002347424.1;Parent=gene2373;Dbxref=UniProtKB%2FTrEMBL:Q7CJ35,Genbank:YP_002347424.1,GeneID:1175294;gbkey=CDS;product=hypothetical protein;protein_id=YP_002347424.1;transl_table=11
NC_003143.1	RefSeq	ribosome_entry_site	2759273	2759276	.	+	.	ID=id1803;gbkey=RBS
NC_003143.1	RefSeq	gene	2759285	2760304	.	+	.	ID=gene2374;Name=YPO2461;Dbxref=GeneID:1175295;gbkey=Gene;locus_tag=YPO2461
NC_003143.1	RefSeq	CDS	2759285	2760304	.	+	0	ID=cds2270;Name=YP_002347425.1;Parent=gene2374;Dbxref=InterPro:IPR001395,UniProtKB%2FTrEMBL:Q7CJ36,Genbank:YP_002347425.1,GeneID:1175295;gbkey=CDS;product=oxidoreductase;protein_id=YP_002347425.1;transl_table=11
NC_003143.1	RefSeq	gene	2760382	2760936	.	-	.	ID=gene2375;Name=YPO2462;Dbxref=GeneID:1175296;gbkey=Gene;locus_tag=YPO2462
NC_003143.1	RefSeq	CDS	2760382	2760936	.	-	0	ID=cds2271;Name=YP_002347426.1;Parent=gene2375;Dbxref=InterPro:IPR013396,UniProtKB%2FTrEMBL:Q7CJ37,Genbank:YP_002347426.1,GeneID:1175296;gbkey=CDS;product=hypothetical protein;protein_id=YP_002347426.1;transl_table=11
NC_003143.1	RefSeq	ribosome_entry_site	2760941	2760948	.	-	.	ID=id1804;gbkey=RBS
NC_003143.1	RefSeq	gene	2760947	2761951	.	-	.	ID=gene2376;Name=YPO2463;Dbxref=GeneID:1175297;gbkey=Gene;locus_tag=YPO2463
NC_003143.1	RefSeq	CDS	2760947	2761951	.	-	0	ID=cds2272;Name=YP_002347427.1;Parent=gene2376;Dbxref=InterPro:IPR013399,UniProtKB%2FTrEMBL:Q7CJ38,Genbank:YP_002347427.1,GeneID:1175297;gbkey=CDS;product=hypothetical protein;protein_id=YP_002347427.1;transl_table=11
NC_003143.1	RefSeq	gene	2761969	2762919	.	-	.	ID=gene2377;Name=YPO2464;Dbxref=GeneID:1175298;gbkey=Gene;locus_tag=YPO2464
NC_003143.1	RefSeq	CDS	2761969	2762919	.	-	0	ID=cds2273;Name=YP_002347428.1;Parent=gene2377;Dbxref=InterPro:IPR013398,UniProtKB%2FTrEMBL:Q7CJ39,Genbank:YP_002347428.1,GeneID:1175298;gbkey=CDS;product=hypothetical protein;protein_id=YP_002347428.1;transl_table=11
NC_003143.1	RefSeq	gene	2762916	2764262	.	-	.	ID=gene2378;Name=YPO2465;Dbxref=GeneID:1175299;gbkey=Gene;locus_tag=YPO2465
NC_003143.1	RefSeq	CDS	2762916	2764262	.	-	0	ID=cds2274;Name=YP_002347429.1;Parent=gene2378;Dbxref=InterPro:IPR001005,InterPro:IPR013397,UniProtKB%2FTrEMBL:Q7CJ40,Genbank:YP_002347429.1,GeneID:1175299;gbkey=CDS;product=hypothetical protein;protein_id=YP_002347429.1;transl_table=11
NC_003143.1	RefSeq	ribosome_entry_site	2762928	2762931	.	-	.	ID=id1805;Dbxref=GeneID:1175299;gbkey=RBS
NC_003143.1	RefSeq	region	2763156	2763182	.	-	.	ID=id1806;Note=PS00037 Myb DNA-binding domain repeat signature 1.;Dbxref=GeneID:1175299;gbkey=misc_feature
NC_003143.1	RefSeq	gene	2764670	2767957	.	-	.	ID=gene2379;Name=YPO2467;Dbxref=GeneID:1175301;gbkey=Gene;locus_tag=YPO2467
NC_003143.1	RefSeq	CDS	2764670	2767957	.	-	0	ID=cds2275;Name=YP_002347431.1;Parent=gene2379;Dbxref=InterPro:IPR013395,UniProtKB%2FTrEMBL:Q7CJ41,Genbank:YP_002347431.1,GeneID:1175301;gbkey=CDS;product=hypothetical protein;protein_id=YP_002347431.1;transl_table=11
NC_003143.1	RefSeq	region	2766635	2766658	.	-	.	ID=id1807;Note=PS00017 ATP%2FGTP-binding site motif A %28P-loop%29.;Dbxref=GeneID:1175301;gbkey=misc_feature
NC_003143.1	RefSeq	region	2767532	2767555	.	-	.	ID=id1808;Note=PS00017 ATP%2FGTP-binding site motif A %28P-loop%29.;Dbxref=GeneID:1175301;gbkey=misc_feature
NC_003143.1	RefSeq	gene	2767954	2768940	.	-	.	ID=gene2380;Name=YPO2468;Dbxref=GeneID:1175302;gbkey=Gene;locus_tag=YPO2468
NC_003143.1	RefSeq	CDS	2767954	2768940	.	-	0	ID=cds2276;Name=YP_002347432.1;Parent=gene2380;Dbxref=InterPro:IPR002729,UniProtKB%2FTrEMBL:Q0WE56,Genbank:YP_002347432.1,GeneID:1175302;gbkey=CDS;product=hypothetical protein;protein_id=YP_002347432.1;transl_table=11
NC_003143.1	RefSeq	gene	2769322	2769654	.	-	.	ID=gene2381;Name=YPO2469;Dbxref=GeneID:1175303;gbkey=Gene;locus_tag=YPO2469
NC_003143.1	RefSeq	CDS	2769322	2769654	.	-	0	ID=cds2277;Name=YP_002347433.1;Parent=gene2381;Dbxref=UniProtKB%2FTrEMBL:Q0WE55,Genbank:YP_002347433.1,GeneID:1175303;gbkey=CDS;product=hypothetical protein;protein_id=YP_002347433.1;transl_table=11
NC_003143.1	RefSeq	gene	2770137	2771384	.	+	.	ID=gene2382;Name=YPO2470;Dbxref=GeneID:1175304;gbkey=Gene;locus_tag=YPO2470
NC_003143.1	RefSeq	CDS	2770137	2771384	.	+	0	ID=cds2278;Name=YP_002347434.1;Parent=gene2382;Dbxref=InterPro:IPR006685,InterPro:IPR010920,UniProtKB%2FTrEMBL:Q7CJ42,Genbank:YP_002347434.1,GeneID:1175304;gbkey=CDS;product=hypothetical protein;protein_id=YP_002347434.1;transl_table=11
NC_003143.1	RefSeq	gene	2771967	2773241	.	-	.	ID=gene2383;Name=YPO2471;Dbxref=GeneID:1175305;gbkey=Gene;locus_tag=YPO2471
NC_003143.1	RefSeq	CDS	2771967	2773241	.	-	0	ID=cds2279;Name=YP_002347435.1;Parent=gene2383;Dbxref=UniProtKB%2FTrEMBL:Q7CJ43,Genbank:YP_002347435.1,GeneID:1175305;gbkey=CDS;product=hypothetical protein;protein_id=YP_002347435.1;transl_table=11
NC_003143.1	RefSeq	gene	2773280	2774395	.	-	.	ID=gene2384;Name=YPO2472;Dbxref=GeneID:1175306;gbkey=Gene;locus_tag=YPO2472
NC_003143.1	RefSeq	CDS	2773280	2774395	.	-	0	ID=cds2280;Name=YP_002347436.1;Parent=gene2384;Dbxref=UniProtKB%2FTrEMBL:Q0WE52,Genbank:YP_002347436.1,GeneID:1175306;gbkey=CDS;product=hypothetical protein;protein_id=YP_002347436.1;transl_table=11
NC_003143.1	RefSeq	gene	2774518	2775456	.	-	.	ID=gene2385;Name=YPO2473;Dbxref=GeneID:1175307;gbkey=Gene;locus_tag=YPO2473
NC_003143.1	RefSeq	CDS	2774518	2775456	.	-	0	ID=cds2281;Name=YP_002347437.1;Parent=gene2385;Note=No significant database hits;Dbxref=UniProtKB%2FTrEMBL:Q7CJ44,Genbank:YP_002347437.1,GeneID:1175307;gbkey=CDS;product=hypothetical protein;protein_id=YP_002347437.1;transl_table=11
NC_003143.1	RefSeq	gene	2775483	2776538	.	-	.	ID=gene2386;Name=YPO2474;Dbxref=GeneID:1175308;gbkey=Gene;locus_tag=YPO2474
NC_003143.1	RefSeq	CDS	2775483	2776538	.	-	0	ID=cds2282;Name=YP_002347438.1;Parent=gene2386;Dbxref=InterPro:IPR007184,UniProtKB%2FTrEMBL:Q7CJ45,Genbank:YP_002347438.1,GeneID:1175308;gbkey=CDS;product=hypothetical protein;protein_id=YP_002347438.1;transl_table=11
NC_003143.1	RefSeq	ribosome_entry_site	2776545	2776548	.	-	.	ID=id1809;gbkey=RBS
NC_003143.1	RefSeq	gene	2776685	2777509	.	-	.	ID=gene2387;Name=YPO2475;Dbxref=GeneID:1175309;gbkey=Gene;locus_tag=YPO2475
NC_003143.1	RefSeq	CDS	2776685	2777509	.	-	0	ID=cds2283;Name=YP_002347439.1;Parent=gene2387;Dbxref=InterPro:IPR000515,UniProtKB%2FTrEMBL:Q7CJ46,Genbank:YP_002347439.1,GeneID:1175309;gbkey=CDS;product=sugar ABC transporter permease;protein_id=YP_002347439.1;transl_table=11
NC_003143.1	RefSeq	gene	2777510	2778385	.	-	.	ID=gene2388;Name=YPO2476;Dbxref=GeneID:1175310;gbkey=Gene;locus_tag=YPO2476
NC_003143.1	RefSeq	CDS	2777510	2778385	.	-	0	ID=cds2284;Name=YP_002347440.1;Parent=gene2388;Dbxref=InterPro:IPR000515,UniProtKB%2FTrEMBL:Q7CJ47,Genbank:YP_002347440.1,GeneID:1175310;gbkey=CDS;product=sugar ABC transporter permease;protein_id=YP_002347440.1;transl_table=11
NC_003143.1	RefSeq	gene	2778494	2779780	.	-	.	ID=gene2389;Name=YPO2477;Dbxref=GeneID:1175311;gbkey=Gene;locus_tag=YPO2477
NC_003143.1	RefSeq	CDS	2778494	2779780	.	-	0	ID=cds2285;Name=YP_002347441.1;Parent=gene2389;Dbxref=InterPro:IPR006059,UniProtKB%2FTrEMBL:Q0WE47,Genbank:YP_002347441.1,GeneID:1175311;gbkey=CDS;product=solute-binding protein;protein_id=YP_002347441.1;transl_table=11
NC_003143.1	RefSeq	gene	2780052	2781092	.	+	.	ID=gene2390;Name=YPO2478;Dbxref=GeneID:1175312;gbkey=Gene;locus_tag=YPO2478
NC_003143.1	RefSeq	CDS	2780052	2781092	.	+	0	ID=cds2286;Name=YP_002347442.1;Parent=gene2390;Dbxref=InterPro:IPR000843,InterPro:IPR001761,InterPro:IPR010982,UniProtKB%2FTrEMBL:Q7CJ48,Genbank:YP_002347442.1,GeneID:1175312;gbkey=CDS;product=LacI family transcriptional regulator;protein_id=YP_002347442.1;transl_table=11
NC_003143.1	RefSeq	region	2780073	2780138	.	+	.	ID=id1810;Note=Predicted helix-turn-helix motif with score 1961 %28%2B5.87 SD%29 at aa 8-29%2C sequence ETLKTIAETLNVTHTTVSNVFN;Dbxref=GeneID:1175312;gbkey=misc_feature
NC_003143.1	RefSeq	gene	2781109	2782497	.	+	.	ID=gene2391;Name=manB;Dbxref=GeneID:1175313;gbkey=Gene;gene=manB;gene_synonym=rfbK,rfbK2;locus_tag=YPO2479
NC_003143.1	RefSeq	CDS	2781109	2782497	.	+	0	ID=cds2287;Name=YP_002347443.1;Parent=gene2391;Dbxref=InterPro:IPR005841,InterPro:IPR005843,InterPro:IPR005844,InterPro:IPR005845,InterPro:IPR005846,UniProtKB%2FTrEMBL:Q0WE45,Genbank:YP_002347443.1,GeneID:1175313;gbkey=CDS;gene=manB;product=phosphomannomutase;protein_id=YP_002347443.1;transl_table=11
NC_003143.1	RefSeq	region	2781382	2781426	.	+	.	ID=id1811;Note=PS00710 Phosphoglucomutase and phosphomannomutase phosphoserine signature.;Dbxref=GeneID:1175313;gbkey=misc_feature;gene=manB
NC_003143.1	RefSeq	ribosome_entry_site	2782587	2782590	.	+	.	ID=id1812;gbkey=RBS
NC_003143.1	RefSeq	gene	2782597	2783676	.	+	.	ID=gene2392;Name=mtlK;Dbxref=GeneID:1175314;gbkey=Gene;gene=mtlK;locus_tag=YPO2480
NC_003143.1	RefSeq	CDS	2782597	2783676	.	+	0	ID=cds2288;Name=YP_002347444.1;Parent=gene2392;Dbxref=InterPro:IPR003439,InterPro:IPR003593,InterPro:IPR008995,InterPro:IPR013611,UniProtKB%2FTrEMBL:Q0WE44,Genbank:YP_002347444.1,GeneID:1175314;gbkey=CDS;gene=mtlK;product=mannitol transport ATP-binding protein;protein_id=YP_002347444.1;transl_table=11
NC_003143.1	RefSeq	region	2782996	2783040	.	+	.	ID=id1813;Note=PS00211 ABC transporters family signature.;Dbxref=GeneID:1175314;gbkey=misc_feature;gene=mtlK
NC_003143.1	RefSeq	gene	2783941	2784486	.	-	.	ID=gene2393;Name=YPO2481;Dbxref=GeneID:1175315;gbkey=Gene;locus_tag=YPO2481
NC_003143.1	RefSeq	CDS	2783941	2784486	.	-	0	ID=cds2289;Name=YP_002347445.1;Parent=gene2393;Dbxref=UniProtKB%2FTrEMBL:Q7CJ49,Genbank:YP_002347445.1,GeneID:1175315;gbkey=CDS;product=hypothetical protein;protein_id=YP_002347445.1;transl_table=11
NC_003143.1	RefSeq	gene	2784744	2785196	.	-	.	ID=gene2394;Name=YPO2482;Dbxref=GeneID:1175316;gbkey=Gene;locus_tag=YPO2482
NC_003143.1	RefSeq	CDS	2784744	2785196	.	-	0	ID=cds2290;Name=YP_002347446.1;Parent=gene2394;Dbxref=UniProtKB%2FTrEMBL:Q0WE42,Genbank:YP_002347446.1,GeneID:1175316;gbkey=CDS;product=hypothetical protein;protein_id=YP_002347446.1;transl_table=11
NC_003143.1	RefSeq	gene	2785296	2785700	.	-	.	ID=gene2395;Name=YPO2483;Dbxref=GeneID:1175317;gbkey=Gene;locus_tag=YPO2483
NC_003143.1	RefSeq	CDS	2785296	2785700	.	-	0	ID=cds2291;Name=YP_002347447.1;Parent=gene2395;Dbxref=UniProtKB%2FTrEMBL:Q7CJ50,Genbank:YP_002347447.1,GeneID:1175317;gbkey=CDS;product=hypothetical protein;protein_id=YP_002347447.1;transl_table=11
NC_003143.1	RefSeq	gene	2785842	2786009	.	-	.	ID=gene2396;Name=YPO2484;Dbxref=GeneID:1175318;gbkey=Gene;locus_tag=YPO2484
NC_003143.1	RefSeq	CDS	2785842	2786009	.	-	0	ID=cds2292;Name=YP_002347448.1;Parent=gene2396;Note=No significant database hits;Dbxref=UniProtKB%2FTrEMBL:Q74T86,Genbank:YP_002347448.1,GeneID:1175318;gbkey=CDS;product=hypothetical protein;protein_id=YP_002347448.1;transl_table=11
NC_003143.1	RefSeq	gene	2786212	2786409	.	-	.	ID=gene2397;Name=YPO2485;Dbxref=GeneID:1175319;gbkey=Gene;locus_tag=YPO2485
NC_003143.1	RefSeq	CDS	2786212	2786409	.	-	0	ID=cds2293;Name=YP_002347449.1;Parent=gene2397;Dbxref=UniProtKB%2FTrEMBL:Q7CJ51,Genbank:YP_002347449.1,GeneID:1175319;gbkey=CDS;product=hypothetical protein;protein_id=YP_002347449.1;transl_table=11
NC_003143.1	RefSeq	gene	2786419	2788452	.	-	.	ID=gene2398;Name=YPO2486;Dbxref=GeneID:1175320;gbkey=Gene;locus_tag=YPO2486
NC_003143.1	RefSeq	CDS	2786419	2788452	.	-	0	ID=cds2294;Name=YP_002347450.1;Parent=gene2398;Dbxref=UniProtKB%2FTrEMBL:Q0WE38,Genbank:YP_002347450.1,GeneID:1175320;gbkey=CDS;product=hypothetical protein;protein_id=YP_002347450.1;transl_table=11
NC_003143.1	RefSeq	region	2786584	2786607	.	-	.	ID=id1814;Note=PS00017 ATP%2FGTP-binding site motif A %28P-loop%29.;Dbxref=GeneID:1175320;gbkey=misc_feature
NC_003143.1	RefSeq	region	2788872	2788940	.	+	.	ID=id1815;Note=1 probable transmembrane helix predicted;gbkey=misc_feature
NC_003143.1	RefSeq	gene	2789116	2789367	.	-	.	ID=gene2399;Name=YPO2488;Dbxref=GeneID:1175322;gbkey=Gene;locus_tag=YPO2488
NC_003143.1	RefSeq	CDS	2789116	2789367	.	-	0	ID=cds2295;Name=YP_002347452.1;Parent=gene2399;Dbxref=UniProtKB%2FTrEMBL:Q7CJ52,Genbank:YP_002347452.1,GeneID:1175322;gbkey=CDS;product=hypothetical protein;protein_id=YP_002347452.1;transl_table=11
NC_003143.1	RefSeq	ribosome_entry_site	2789377	2789380	.	-	.	ID=id1816;gbkey=RBS
NC_003143.1	RefSeq	gene	2789612	2790115	.	-	.	ID=gene2400;Name=YPO2489;Dbxref=GeneID:1175323;gbkey=Gene;locus_tag=YPO2489
NC_003143.1	RefSeq	CDS	2789612	2790115	.	-	0	ID=cds2296;Name=YP_002347453.1;Parent=gene2400;Dbxref=UniProtKB%2FTrEMBL:Q0WE35,Genbank:YP_002347453.1,GeneID:1175323;gbkey=CDS;product=hypothetical protein;protein_id=YP_002347453.1;transl_table=11
NC_003143.1	RefSeq	gene	2790123	2797730	.	-	.	ID=gene2401;Name=YPO2490;Dbxref=GeneID:1175324;gbkey=Gene;locus_tag=YPO2490
NC_003143.1	RefSeq	CDS	2790123	2797730	.	-	0	ID=cds2297;Name=YP_002347454.1;Parent=gene2401;Dbxref=InterPro:IPR008619,InterPro:IPR008638,InterPro:IPR010069,InterPro:IPR011050,UniProtKB%2FTrEMBL:Q0WE34,Genbank:YP_002347454.1,GeneID:1175324;gbkey=CDS;product=hemolysin;protein_id=YP_002347454.1;transl_table=11
NC_003143.1	RefSeq	region	2790441	2790464	.	-	.	ID=id1817;Note=PS00017 ATP%2FGTP-binding site motif A %28P-loop%29.;Dbxref=GeneID:1175324;gbkey=misc_feature
NC_003143.1	RefSeq	gene	2797874	2799562	.	-	.	ID=gene2402;Name=YPO2491;Dbxref=GeneID:1175325;gbkey=Gene;locus_tag=YPO2491
NC_003143.1	RefSeq	CDS	2797874	2799562	.	-	0	ID=cds2298;Name=YP_002347455.1;Parent=gene2402;Dbxref=InterPro:IPR005565,InterPro:IPR013686,UniProtKB%2FTrEMBL:Q7CJ53,Genbank:YP_002347455.1,GeneID:1175325;gbkey=CDS;product=hemolysin activator protein;protein_id=YP_002347455.1;transl_table=11
NC_003143.1	RefSeq	ribosome_entry_site	2799571	2799574	.	-	.	ID=id1818;gbkey=RBS
NC_003143.1	RefSeq	gene	2800214	2801179	.	-	.	ID=gene2403;Name=YPO2492;Dbxref=GeneID:1175326;gbkey=Gene;locus_tag=YPO2492
NC_003143.1	RefSeq	CDS	2800214	2801179	.	-	0	ID=cds2299;Name=YP_002347456.1;Parent=gene2403;Dbxref=InterPro:IPR000951,InterPro:IPR001041,InterPro:IPR001433,InterPro:IPR006058,InterPro:IPR008333,InterPro:IPR012675,UniProtKB%2FTrEMBL:Q7CJ54,Genbank:YP_002347456.1,GeneID:1175326;gbkey=CDS;product=dioxygenase subunit beta;protein_id=YP_002347456.1;transl_table=11
NC_003143.1	RefSeq	region	2800346	2800372	.	-	.	ID=id1819;Note=PS00197 2Fe-2S ferredoxins%2C iron-sulfur binding region signature.;Dbxref=GeneID:1175326;gbkey=misc_feature
NC_003143.1	RefSeq	gene	2801275	2802399	.	-	.	ID=gene2404;Name=YPO2493;Dbxref=GeneID:1175327;gbkey=Gene;locus_tag=YPO2493
NC_003143.1	RefSeq	CDS	2801275	2802399	.	-	0	ID=cds2300;Name=YP_002347457.1;Parent=gene2404;Dbxref=InterPro:IPR001663,InterPro:IPR005806,UniProtKB%2FTrEMBL:Q0WE31,Genbank:YP_002347457.1,GeneID:1175327;gbkey=CDS;product=dioxygenase subunit alpha;protein_id=YP_002347457.1;transl_table=11
NC_003143.1	RefSeq	gene	2802516	2803997	.	-	.	ID=gene2405;Name=YPO2494;Dbxref=GeneID:1175328;gbkey=Gene;locus_tag=YPO2494
NC_003143.1	RefSeq	CDS	2802516	2803997	.	-	0	ID=cds2301;Name=YP_002347458.1;Parent=gene2405;Note=member of the betaine%2C carnitine%2C choline transporter %28BCCT%29 family%3B unknown function;Dbxref=InterPro:IPR000060,InterPro:IPR000595,UniProtKB%2FTrEMBL:Q0WE30,Genbank:YP_002347458.1,GeneID:1175328;gbkey=CDS;product=transporter;protein_id=YP_002347458.1;transl_table=11
NC_003143.1	RefSeq	region	2803203	2803232	.	-	.	ID=id1820;Note=PS01303 BCCT family of transporters signature.;Dbxref=GeneID:1175328;gbkey=misc_feature
NC_003143.1	RefSeq	region	2803344	2803394	.	-	.	ID=id1821;Note=PS00888 Cyclic nucleotide-binding domain signature 1.;Dbxref=GeneID:1175328;gbkey=misc_feature
NC_003143.1	RefSeq	ribosome_entry_site	2804169	2804174	.	-	.	ID=id1822;gbkey=RBS
NC_003143.1	RefSeq	gene	2804528	2804710	.	-	.	ID=gene2406;Name=YPO2495;Dbxref=GeneID:1175329;gbkey=Gene;locus_tag=YPO2495
NC_003143.1	RefSeq	CDS	2804528	2804710	.	-	0	ID=cds2302;Name=YP_002347459.1;Parent=gene2406;Dbxref=UniProtKB%2FTrEMBL:Q74T79,Genbank:YP_002347459.1,GeneID:1175329;gbkey=CDS;product=hypothetical protein;protein_id=YP_002347459.1;transl_table=11
NC_003143.1	RefSeq	region	2804549	2804614	.	-	.	ID=id1823;Note=1 probable transmembrane helix predicted;Dbxref=GeneID:1175329;gbkey=misc_feature
NC_003143.1	RefSeq	gene	2804779	2805876	.	-	.	ID=gene2407;Name=YPO2496;Dbxref=GeneID:1175330;gbkey=Gene;locus_tag=YPO2496
NC_003143.1	RefSeq	CDS	2804779	2805876	.	-	0	ID=cds2303;Name=YP_002347460.1;Parent=gene2407;Dbxref=InterPro:IPR001804,InterPro:IPR011829,InterPro:IPR013814,UniProtKB%2FTrEMBL:Q74T78,Genbank:YP_002347460.1,GeneID:1175330;gbkey=CDS;product=tartrate dehydrogenase;protein_id=YP_002347460.1;transl_table=11
NC_003143.1	RefSeq	region	2805076	2805135	.	-	.	ID=id1824;Note=PS00470 Isocitrate and isopropylmalate dehydrogenases signature.;Dbxref=GeneID:1175330;gbkey=misc_feature
NC_003143.1	RefSeq	gene	2805967	2806908	.	+	.	ID=gene2408;Name=YPO2497;Dbxref=GeneID:1175331;gbkey=Gene;locus_tag=YPO2497
NC_003143.1	RefSeq	CDS	2805967	2806908	.	+	0	ID=cds2304;Name=YP_002347461.1;Parent=gene2408;Dbxref=InterPro:IPR000847,InterPro:IPR005119,InterPro:IPR011991,UniProtKB%2FTrEMBL:Q7CJ55,Genbank:YP_002347461.1,GeneID:1175331;gbkey=CDS;product=LysR family transcriptional regulator;protein_id=YP_002347461.1;transl_table=11
NC_003143.1	RefSeq	region	2806024	2806089	.	+	.	ID=id1825;Note=Predicted helix-turn-helix motif with score 1377 %28%2B3.88 SD%29 at aa 37-58%2C sequence AGFAAAAEEMGVSPAYVSKRVA;Dbxref=GeneID:1175331;gbkey=misc_feature
NC_003143.1	RefSeq	gene	2807155	2808159	.	+	.	ID=gene2409;Name=YPO2498;Dbxref=GeneID:1175332;gbkey=Gene;locus_tag=YPO2498
NC_003143.1	RefSeq	CDS	2807155	2808159	.	+	0	ID=cds2305;Name=YP_002347462.1;Parent=gene2409;Dbxref=InterPro:IPR000843,InterPro:IPR001761,InterPro:IPR010982,UniProtKB%2FTrEMBL:Q7CJ56,Genbank:YP_002347462.1,GeneID:1175332;gbkey=CDS;product=LacI family transcriptional regulator;protein_id=YP_002347462.1;transl_table=11
NC_003143.1	RefSeq	region	2807176	2807241	.	+	.	ID=id1826;Note=Predicted helix-turn-helix motif with score 1490 %28%2B4.26 SD%29 at aa 8-29%2C sequence ATIVDIARRANVTNITVSRTFN;Dbxref=GeneID:1175332;gbkey=misc_feature
NC_003143.1	RefSeq	gene	2808292	2809284	.	-	.	ID=gene2410;Name=rbsC;Dbxref=GeneID:1175333;gbkey=Gene;gene=rbsC;locus_tag=YPO2499
NC_003143.1	RefSeq	CDS	2808292	2809284	.	-	0	ID=cds2306;Name=YP_002347463.1;Parent=gene2410;Dbxref=InterPro:IPR001851,UniProtKB%2FTrEMBL:Q7CJ57,Genbank:YP_002347463.1,GeneID:1175333;gbkey=CDS;gene=rbsC;product=sugar transport system permease;protein_id=YP_002347463.1;transl_table=11
NC_003143.1	RefSeq	gene	2809281	2810771	.	-	.	ID=gene2411;Name=rbsA;Dbxref=GeneID:1175334;gbkey=Gene;gene=rbsA;locus_tag=YPO2500
NC_003143.1	RefSeq	CDS	2809281	2810771	.	-	0	ID=cds2307;Name=YP_002347464.1;Parent=gene2411;Dbxref=InterPro:IPR003439,InterPro:IPR003593,UniProtKB%2FTrEMBL:Q7CJ58,Genbank:YP_002347464.1,GeneID:1175334;gbkey=CDS;gene=rbsA;product=sugar transport system ATP-binding protein;protein_id=YP_002347464.1;transl_table=11
NC_003143.1	RefSeq	region	2809542	2809586	.	-	.	ID=id1827;Note=PS00211 ABC transporters family signature.;Dbxref=GeneID:1175334;gbkey=misc_feature;gene=rbsA
NC_003143.1	RefSeq	region	2810640	2810663	.	-	.	ID=id1828;Note=PS00017 ATP%2FGTP-binding site motif A %28P-loop%29.;Dbxref=GeneID:1175334;gbkey=misc_feature;gene=rbsA
NC_003143.1	RefSeq	gene	2810811	2811728	.	-	.	ID=gene2412;Name=rbsB;Dbxref=GeneID:1175335;gbkey=Gene;gene=rbsB;locus_tag=YPO2501
NC_003143.1	RefSeq	CDS	2810811	2811728	.	-	0	ID=cds2308;Name=YP_002347465.1;Parent=gene2412;Dbxref=InterPro:IPR001761,UniProtKB%2FTrEMBL:Q7CJ59,Genbank:YP_002347465.1,GeneID:1175335;gbkey=CDS;gene=rbsB;product=sugar binding protein;protein_id=YP_002347465.1;transl_table=11
NC_003143.1	RefSeq	gene	2811903	2813129	.	-	.	ID=gene2413;Name=gutB;Dbxref=GeneID:1175336;gbkey=Gene;gene=gutB;locus_tag=YPO2502
NC_003143.1	RefSeq	CDS	2811903	2813129	.	-	0	ID=cds2309;Name=YP_002347466.1;Parent=gene2413;Dbxref=InterPro:IPR002085,InterPro:IPR011032,InterPro:IPR011597,InterPro:IPR013149,InterPro:IPR013154,UniProtKB%2FTrEMBL:Q7CJ60,Genbank:YP_002347466.1,GeneID:1175336;gbkey=CDS;gene=gutB;product=zinc-binding dehydrogenase;protein_id=YP_002347466.1;transl_table=11
NC_003143.1	RefSeq	region	2813058	2813123	.	-	.	ID=id1829;Note=1 probable transmembrane helix predicted;Dbxref=GeneID:1175336;gbkey=misc_feature;gene=gutB
NC_003143.1	RefSeq	gene	2813712	2814380	.	-	.	ID=gene2414;Name=YPO2503;Dbxref=GeneID:1175337;gbkey=Gene;locus_tag=YPO2503
NC_003143.1	RefSeq	CDS	2813712	2814380	.	-	0	ID=cds2310;Name=YP_002347467.1;Parent=gene2414;Dbxref=UniProtKB%2FTrEMBL:Q74T71,Genbank:YP_002347467.1,GeneID:1175337;gbkey=CDS;product=hypothetical protein;protein_id=YP_002347467.1;transl_table=11
NC_003143.1	RefSeq	gene	2814576	2815118	.	-	.	ID=gene2415;Name=YPO2504;Dbxref=GeneID:1175338;gbkey=Gene;locus_tag=YPO2504
NC_003143.1	RefSeq	CDS	2814576	2815118	.	-	0	ID=cds2311;Name=YP_002347468.1;Parent=gene2415;Note=No significant database hits. CDS DNA has a low G%2BC content%2C 38.85%25.;Dbxref=UniProtKB%2FTrEMBL:Q7CJ61,Genbank:YP_002347468.1,GeneID:1175338;gbkey=CDS;product=hypothetical protein;protein_id=YP_002347468.1;transl_table=11
NC_003143.1	RefSeq	gene	2815356	2816294	.	-	.	ID=gene2416;Name=YPO2505;Dbxref=GeneID:1175339;gbkey=Gene;locus_tag=YPO2505
NC_003143.1	RefSeq	CDS	2815356	2816294	.	-	0	ID=cds2312;Name=YP_002347469.1;Parent=gene2416;Dbxref=InterPro:IPR002524,UniProtKB%2FTrEMBL:Q7CJ62,Genbank:YP_002347469.1,GeneID:1175339;gbkey=CDS;product=hypothetical protein;protein_id=YP_002347469.1;transl_table=11
NC_003143.1	RefSeq	gene	2816610	2817134	.	-	.	ID=gene2417;Name=ompX;Dbxref=GeneID:1175340;gbkey=Gene;gene=ompX;locus_tag=YPO2506
NC_003143.1	RefSeq	CDS	2816610	2817134	.	-	0	ID=cds2313;Name=YP_002347470.1;Parent=gene2417;Note=OmpX%3B involved in cell adhesion%3B forms an eight-stranded antiparallel beta-barrel that protrudes from the cell surface%3B mutations in the gene increase cell-surface contact in fimbriated strains but decrease contact in nonfimbriated strains;Dbxref=InterPro:IPR000758,UniProtKB%2FTrEMBL:Q0WE18,Genbank:YP_002347470.1,GeneID:1175340;gbkey=CDS;gene=ompX;product=outer membrane protein X;protein_id=YP_002347470.1;transl_table=11
NC_003143.1	RefSeq	region	2816970	2816996	.	-	.	ID=id1830;Note=PS00694 Enterobacterial virulence outer membrane protein signature 1.;Dbxref=GeneID:1175340;gbkey=misc_feature;gene=ompX
NC_003143.1	RefSeq	gene	2817539	2818426	.	+	.	ID=gene2418;Name=YPO2507;Dbxref=GeneID:1175341;gbkey=Gene;locus_tag=YPO2507
NC_003143.1	RefSeq	CDS	2817539	2818426	.	+	0	ID=cds2314;Name=YP_002347471.1;Parent=gene2418;Dbxref=InterPro:IPR000620,UniProtKB%2FTrEMBL:Q7CJ63,Genbank:YP_002347471.1,GeneID:1175341;gbkey=CDS;product=threonine and homoserine efflux system;protein_id=YP_002347471.1;transl_table=11
NC_003143.1	RefSeq	region	2817989	2818021	.	+	.	ID=id1831;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site.;Dbxref=GeneID:1175341;gbkey=misc_feature
NC_003143.1	RefSeq	gene	2818442	2818939	.	+	.	ID=gene2419;Name=YPO2508;Dbxref=GeneID:1175342;gbkey=Gene;locus_tag=YPO2508
NC_003143.1	RefSeq	CDS	2818442	2818939	.	+	0	ID=cds2315;Name=YP_002347472.1;Parent=gene2419;Dbxref=InterPro:IPR000182,UniProtKB%2FTrEMBL:Q7CJ64,Genbank:YP_002347472.1,GeneID:1175342;gbkey=CDS;product=hypothetical protein;protein_id=YP_002347472.1;transl_table=11
NC_003143.1	RefSeq	gene	2818962	2819738	.	+	.	ID=gene2420;Name=tam;Dbxref=GeneID:1175343;gbkey=Gene;gene=tam;locus_tag=YPO2509
NC_003143.1	RefSeq	CDS	2818962	2819738	.	+	0	ID=cds2316;Name=YP_002347473.1;Parent=gene2420;Note=catalyzes the formation of %28E%29-3-%28methoxycarbonyl%29pent-2-enedioate and S-adenosyl-L-homocysteine from S-adenosyl-L-methionine and trans-aconitate;Dbxref=InterPro:IPR013216,UniProtKB%2FTrEMBL:Q0WE15,Genbank:YP_002347473.1,GeneID:1175343;gbkey=CDS;gene=tam;product=trans-aconitate 2-methyltransferase;protein_id=YP_002347473.1;transl_table=11
NC_003143.1	RefSeq	gene	2819995	2820498	.	+	.	ID=gene2421;Name=dps;Dbxref=GeneID:1175344;gbkey=Gene;gene=dps;locus_tag=YPO2510
NC_003143.1	RefSeq	CDS	2819995	2820498	.	+	0	ID=cds2317;Name=YP_002347474.1;Parent=gene2421;Note=binds DNA in a non-sequence-specific manner and is abundant during stationary phase%3B forms a DNA-protein crystal that protects DNA from damage%3B required for normal starvation response and long-term stationary viability%3B forms a homododecameric complex and sequesters iron which provides protection against oxidative damage;Dbxref=InterPro:IPR002177,InterPro:IPR008331,InterPro:IPR009078,InterPro:IPR012347,UniProtKB%2FTrEMBL:Q7CJ65,Genbank:YP_002347474.1,GeneID:1175344;gbkey=CDS;gene=dps;product=DNA starvation%2Fstationary phase protection protein Dps;protein_id=YP_002347474.1;transl_table=11
NC_003143.1	RefSeq	region	2820145	2820195	.	+	.	ID=id1832;Note=PS00818 Dps protein family signature 1.;Dbxref=GeneID:1175344;gbkey=misc_feature;gene=dps
NC_003143.1	RefSeq	gene	2820818	2821945	.	+	.	ID=gene2422;Name=YPO2511;Dbxref=GeneID:1175345;gbkey=Gene;locus_tag=YPO2511
NC_003143.1	RefSeq	CDS	2820818	2821945	.	+	0	ID=cds2318;Name=YP_002347475.1;Parent=gene2422;Dbxref=InterPro:IPR003848,InterPro:IPR011990,InterPro:IPR013026,UniProtKB%2FTrEMBL:Q7CJ66,Genbank:YP_002347475.1,GeneID:1175345;gbkey=CDS;product=hypothetical protein;protein_id=YP_002347475.1;transl_table=11
NC_003143.1	RefSeq	gene	2822515	2823258	.	+	.	ID=gene2423;Name=glnH;Dbxref=GeneID:1175346;gbkey=Gene;gene=glnH;locus_tag=YPO2512
NC_003143.1	RefSeq	CDS	2822515	2823258	.	+	0	ID=cds2319;Name=YP_002347476.1;Parent=gene2423;Note=similar to periplasmic-binding component of ABC transporters;Dbxref=InterPro:IPR001638,InterPro:IPR005768,UniProtKB%2FTrEMBL:Q7CJ67,Genbank:YP_002347476.1,GeneID:1175346;gbkey=CDS;gene=glnH;product=glutamine ABC transporter substrate-binding protein;protein_id=YP_002347476.1;transl_table=11
NC_003143.1	RefSeq	region	2822656	2822697	.	+	.	ID=id1833;Note=PS01039 Bacterial extracellular solute-binding proteins%2C family 3 signature.;Dbxref=GeneID:1175346;gbkey=misc_feature;gene=glnH
NC_003143.1	RefSeq	gene	2823293	2823949	.	+	.	ID=gene2424;Name=glnP;Dbxref=GeneID:1175347;gbkey=Gene;gene=glnP;locus_tag=YPO2513
NC_003143.1	RefSeq	CDS	2823293	2823949	.	+	0	ID=cds2320;Name=YP_002347477.1;Parent=gene2424;Note=similar to permease component of ABC transporters%3B mutations impair ability of Escherichia coli to transport and utilize glutamine;Dbxref=InterPro:IPR000515,InterPro:IPR010065,UniProtKB%2FTrEMBL:Q7CJ68,Genbank:YP_002347477.1,GeneID:1175347;gbkey=CDS;gene=glnP;product=glutamine ABC transporter permease;protein_id=YP_002347477.1;transl_table=11
NC_003143.1	RefSeq	gene	2823946	2824668	.	+	.	ID=gene2425;Name=glnQ;Dbxref=GeneID:1175348;gbkey=Gene;gene=glnQ;locus_tag=YPO2514
NC_003143.1	RefSeq	CDS	2823946	2824668	.	+	0	ID=cds2321;Name=YP_002347478.1;Parent=gene2425;Note=similar to ATP-binding component of ABC transporters;Dbxref=InterPro:IPR003439,InterPro:IPR003593,UniProtKB%2FTrEMBL:Q7CJ69,Genbank:YP_002347478.1,GeneID:1175348;gbkey=CDS;gene=glnQ;product=glutamine ABC transporter ATP-binding protein;protein_id=YP_002347478.1;transl_table=11
NC_003143.1	RefSeq	region	2824045	2824068	.	+	.	ID=id1834;Note=PS00017 ATP%2FGTP-binding site motif A %28P-loop%29.;Dbxref=GeneID:1175348;gbkey=misc_feature;gene=glnQ
NC_003143.1	RefSeq	region	2824354	2824398	.	+	.	ID=id1835;Note=PS00211 ABC transporters family signature.;Dbxref=GeneID:1175348;gbkey=misc_feature;gene=glnQ
NC_003143.1	RefSeq	gene	2824908	2826155	.	-	.	ID=gene2426;Name=YPO2515;Dbxref=GeneID:1175349;gbkey=Gene;locus_tag=YPO2515
NC_003143.1	RefSeq	CDS	2824908	2826155	.	-	0	ID=cds2322;Name=YP_002347479.1;Parent=gene2426;Dbxref=InterPro:IPR000014,InterPro:IPR000700,InterPro:IPR001610,InterPro:IPR004089,InterPro:IPR004090,InterPro:IPR013655,UniProtKB%2FTrEMBL:Q0WE09,Genbank:YP_002347479.1,GeneID:1175349;gbkey=CDS;product=chemotactic transducer;protein_id=YP_002347479.1;transl_table=11
NC_003143.1	RefSeq	repeat_region	2826179	2828132	.	+	.	ID=id1836;Note=insertion sequence:IS100;gbkey=repeat_region
NC_003143.1	RefSeq	repeat_region	2826179	2826206	.	+	.	ID=id1837;Note=IS100 inverted repeat;gbkey=repeat_region
NC_003143.1	RefSeq	gene	2826265	2827287	.	+	.	ID=gene2427;Name=y1093;Dbxref=GeneID:1175350;gbkey=Gene;gene=y1093;gene_synonym=ypmt1;locus_tag=YPO2516
NC_003143.1	RefSeq	CDS	2826265	2827287	.	+	0	ID=cds2323;Name=YP_002347480.1;Parent=gene2427;Dbxref=InterPro:IPR001584,InterPro:IPR006120,InterPro:IPR009057,InterPro:IPR012287,InterPro:IPR012337,UniProtKB%2FTrEMBL:Q7ARN5,Genbank:YP_002347480.1,GeneID:1175350;gbkey=CDS;gene=y1093;product=transposase for insertion sequence IS100;protein_id=YP_002347480.1;transl_table=11
NC_003143.1	RefSeq	region	2826316	2826381	.	+	.	ID=id1838;Note=Predicted helix-turn-helix motif with score 2147 %28%2B6.50 SD%29 at aa 18-39%2C sequence MSSRAIARELGISRNTVKRYLQ;Dbxref=GeneID:1175350;gbkey=misc_feature;gene=y1093
NC_003143.1	RefSeq	gene	2827284	2828066	.	+	.	ID=gene2428;Name=YPO2517;Note=ypmt1.57c;Dbxref=GeneID:1175351;gbkey=Gene;locus_tag=YPO2517
NC_003143.1	RefSeq	CDS	2827284	2828066	.	+	0	ID=cds2324;Name=YP_002347481.1;Parent=gene2428;Dbxref=InterPro:IPR001270,InterPro:IPR002611,InterPro:IPR003593,UniProtKB%2FTrEMBL:Q7ARK4,Genbank:YP_002347481.1,GeneID:1175351;gbkey=CDS;product=transposase%2FIS protein;protein_id=YP_002347481.1;transl_table=11
NC_003143.1	RefSeq	region	2827611	2827634	.	+	.	ID=id1839;Note=PS00017 ATP%2FGTP-binding site motif A %28P-loop%29.;Dbxref=GeneID:1175351;gbkey=misc_feature
NC_003143.1	RefSeq	repeat_region	2828105	2828132	.	-	.	ID=id1840;Note=IS100 inverted repeat;gbkey=repeat_region
NC_003143.1	RefSeq	gene	2828928	2829938	.	-	.	ID=gene2429;Name=YPO2519;Dbxref=GeneID:1175352;gbkey=Gene;locus_tag=YPO2519
NC_003143.1	RefSeq	CDS	2828928	2829938	.	-	0	ID=cds2325;Name=YP_002347482.1;Parent=gene2429;Dbxref=InterPro:IPR010286,UniProtKB%2FTrEMBL:Q7CJ72,Genbank:YP_002347482.1,GeneID:1175352;gbkey=CDS;product=SAM-dependent methyltransferase;protein_id=YP_002347482.1;transl_table=11
NC_003143.1	RefSeq	gene	2830226	2830486	.	+	.	ID=gene2430;Name=YPO2521;Dbxref=GeneID:1175353;gbkey=Gene;locus_tag=YPO2521
NC_003143.1	RefSeq	CDS	2830226	2830486	.	+	0	ID=cds2326;Name=YP_002347483.1;Parent=gene2430;Dbxref=InterPro:IPR010854,UniProtKB%2FTrEMBL:Q7CJ73,Genbank:YP_002347483.1,GeneID:1175353;gbkey=CDS;product=hypothetical protein;protein_id=YP_002347483.1;transl_table=11
NC_003143.1	RefSeq	gene	2830477	2830635	.	-	.	ID=gene2431;Name=YPO2521a;Dbxref=GeneID:16744765;gbkey=Gene;locus_tag=YPO2521a
NC_003143.1	RefSeq	CDS	2830477	2830635	.	-	0	ID=cds2327;Name=YP_008479717.1;Parent=gene2431;Dbxref=Genbank:YP_008479717.1,GeneID:16744765;gbkey=CDS;product=hypothetical protein;protein_id=YP_008479717.1;transl_table=11
NC_003143.1	RefSeq	gene	2830868	2831827	.	-	.	ID=gene2432;Name=ybiB;Dbxref=GeneID:1175354;gbkey=Gene;gene=ybiB;locus_tag=YPO2522
NC_003143.1	RefSeq	CDS	2830868	2831827	.	-	0	ID=cds2328;Name=YP_002347484.1;Parent=gene2432;Dbxref=InterPro:IPR000312,UniProtKB%2FTrEMBL:Q7CJ74,Genbank:YP_002347484.1,GeneID:1175354;gbkey=CDS;gene=ybiB;product=glycosyl transferase family protein;protein_id=YP_002347484.1;transl_table=11
NC_003143.1	RefSeq	gene	2831893	2833308	.	-	.	ID=gene2433;Name=menE;Dbxref=GeneID:1175355;gbkey=Gene;gene=menE;locus_tag=YPO2523
NC_003143.1	RefSeq	CDS	2831893	2833308	.	-	0	ID=cds2329;Name=YP_002347485.1;Parent=gene2433;Dbxref=InterPro:IPR000873,InterPro:IPR010192,UniProtKB%2FTrEMBL:Q74T56,Genbank:YP_002347485.1,GeneID:1175355;gbkey=CDS;gene=menE;product=O-succinylbenzoic acid--CoA ligase;protein_id=YP_002347485.1;transl_table=11
NC_003143.1	RefSeq	region	2832832	2832867	.	-	.	ID=id1841;Note=PS00455  AMP-binding domain signature.;Dbxref=GeneID:1175355;gbkey=misc_feature;gene=menE
NC_003143.1	RefSeq	gene	2833296	2834267	.	-	.	ID=gene2434;Name=menC;Dbxref=GeneID:1175356;gbkey=Gene;gene=menC;locus_tag=YPO2524
NC_003143.1	RefSeq	CDS	2833296	2834267	.	-	0	ID=cds2330;Name=YP_002347486.1;Parent=gene2434;Note=catalyzes the dehydration of 2-succinyl-6-hydroxy-2%2C4-cyclohexadiene-1-carboxylic acid to form O-succinylbenzoate;Dbxref=InterPro:IPR010196,UniProtKB%2FTrEMBL:Q0WE02,Genbank:YP_002347486.1,GeneID:1175356;gbkey=CDS;gene=menC;product=O-succinylbenzoate synthase;protein_id=YP_002347486.1;transl_table=11
NC_003143.1	RefSeq	region	2833998	2834030	.	-	.	ID=id1842;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site.;Dbxref=GeneID:1175356;gbkey=misc_feature;gene=menC
NC_003143.1	RefSeq	gene	2834267	2835124	.	-	.	ID=gene2435;Name=menB;Dbxref=GeneID:1175357;gbkey=Gene;gene=menB;locus_tag=YPO2525
NC_003143.1	RefSeq	CDS	2834267	2835124	.	-	0	ID=cds2331;Name=YP_002347487.1;Parent=gene2435;Note=catalyzes the formation of 1%2C4-dihydroxy-2-naphthoate from O-succinylbenzoyl-CoA;Dbxref=InterPro:IPR001753,InterPro:IPR010198,UniProtKB%2FTrEMBL:Q74T55,Genbank:YP_002347487.1,GeneID:1175357;gbkey=CDS;gene=menB;product=naphthoate synthase;protein_id=YP_002347487.1;transl_table=11
NC_003143.1	RefSeq	region	2834696	2834758	.	-	.	ID=id1843;Note=PS00166 Enoyl-CoA hydratase%2Fisomerase signature.;Dbxref=GeneID:1175357;gbkey=misc_feature;gene=menB
NC_003143.1	RefSeq	gene	2835138	2835956	.	-	.	ID=gene2436;Name=YPO2526;Dbxref=GeneID:1175358;gbkey=Gene;locus_tag=YPO2526
NC_003143.1	RefSeq	CDS	2835138	2835956	.	-	0	ID=cds2332;Name=YP_002347488.1;Parent=gene2436;Note=catalyzes the hydrolysis of the thioester bond in palmitoyl-CoA;Dbxref=InterPro:IPR000073,UniProtKB%2FTrEMBL:Q7CJ75,Genbank:YP_002347488.1,GeneID:1175358;gbkey=CDS;product=acyl-CoA thioester hydrolase;protein_id=YP_002347488.1;transl_table=11
NC_003143.1	RefSeq	gene	2835953	2837656	.	-	.	ID=gene2437;Name=menD;Dbxref=GeneID:1175359;gbkey=Gene;gene=menD;locus_tag=YPO2527
NC_003143.1	RefSeq	CDS	2835953	2837656	.	-	0	ID=cds2333;Name=YP_002347489.1;Parent=gene2437;Note=SEPHCHC synthase%3B forms 5-enolpyruvoyl-6-hydroxy-2-succinyl-cyclohex-3-ene-1-carboxylate from 2-oxoglutarate and isochorismate in menaquinone biosynthesis;Dbxref=InterPro:IPR004433,UniProtKB%2FTrEMBL:Q7CJ76,Genbank:YP_002347489.1,GeneID:1175359;gbkey=CDS;gene=menD;product=2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate synthase;protein_id=YP_002347489.1;transl_table=11
NC_003143.1	RefSeq	gene	2837884	2839251	.	-	.	ID=gene2438;Name=menF;Dbxref=GeneID:1175360;gbkey=Gene;gene=menF;locus_tag=YPO2528
NC_003143.1	RefSeq	CDS	2837884	2839251	.	-	0	ID=cds2334;Name=YP_002347490.1;Parent=gene2438;Dbxref=InterPro:IPR004561,InterPro:IPR005801,UniProtKB%2FTrEMBL:Q0WDZ8,Genbank:YP_002347490.1,GeneID:1175360;gbkey=CDS;gene=menF;product=menaquinone-specific isochorismate synthase;protein_id=YP_002347490.1;transl_table=11
NC_003143.1	RefSeq	gene	2839779	2840423	.	-	.	ID=gene2439;Name=YPO2530;Dbxref=GeneID:1175361;gbkey=Gene;locus_tag=YPO2530
NC_003143.1	RefSeq	CDS	2839779	2840423	.	-	0	ID=cds2335;Name=YP_002347491.1;Parent=gene2439;Dbxref=UniProtKB%2FTrEMBL:Q7CJ77,Genbank:YP_002347491.1,GeneID:1175361;gbkey=CDS;product=hypothetical protein;protein_id=YP_002347491.1;transl_table=11
NC_003143.1	RefSeq	gene	2840978	2841286	.	-	.	ID=gene2440;Name=elaB;Dbxref=GeneID:1175362;gbkey=Gene;gene=elaB;locus_tag=YPO2531
NC_003143.1	RefSeq	CDS	2840978	2841286	.	-	0	ID=cds2336;Name=YP_002347492.1;Parent=gene2440;Dbxref=InterPro:IPR010279,UniProtKB%2FTrEMBL:Q0WDZ6,Genbank:YP_002347492.1,GeneID:1175362;gbkey=CDS;gene=elaB;product=hypothetical protein;protein_id=YP_002347492.1;transl_table=11
NC_003143.1	RefSeq	region	2840987	2841043	.	-	.	ID=id1844;Note=1 probable transmembrane helix predicted;Dbxref=GeneID:1175362;gbkey=misc_feature;gene=elaB
NC_003143.1	RefSeq	gene	2841811	2841993	.	+	.	ID=gene2441;Name=YPO2531a;Dbxref=GeneID:16744766;gbkey=Gene;locus_tag=YPO2531a
NC_003143.1	RefSeq	CDS	2841811	2841993	.	+	0	ID=cds2337;Name=YP_008479718.1;Parent=gene2441;Dbxref=Genbank:YP_008479718.1,GeneID:16744766;gbkey=CDS;product=membrane protein;protein_id=YP_008479718.1;transl_table=11
NC_003143.1	RefSeq	gene	2842212	2844089	.	-	.	ID=gene2442;Name=edd;Dbxref=GeneID:1175364;gbkey=Gene;gene=edd;locus_tag=YPO2533
NC_003143.1	RefSeq	CDS	2842212	2844089	.	-	0	ID=cds2338;Name=YP_002347494.1;Parent=gene2442;Note=catalyzes the formation of 2-dehydro-3-deoxy-6-phospho-D-gluconate from 6-phospho-D-gluconate;Dbxref=InterPro:IPR000581,InterPro:IPR004786,UniProtKB%2FTrEMBL:Q7CJ78,Genbank:YP_002347494.1,GeneID:1175364;gbkey=CDS;gene=edd;product=phosphogluconate dehydratase;protein_id=YP_002347494.1;transl_table=11
NC_003143.1	RefSeq	region	2842476	2842511	.	-	.	ID=id1845;Note=PS00887 Dihydroxy-acid and 6-phosphogluconate dehydratases signature 2.;Dbxref=GeneID:1175364;gbkey=misc_feature;gene=edd
NC_003143.1	RefSeq	region	2843592	2843624	.	-	.	ID=id1846;Note=PS00886 Dihydroxy-acid and 6-phosphogluconate dehydratases signature 1.;Dbxref=GeneID:1175364;gbkey=misc_feature;gene=edd
NC_003143.1	RefSeq	gene	2844093	2844608	.	-	.	ID=gene2443;Name=YPO2534;Dbxref=GeneID:1175365;gbkey=Gene;locus_tag=YPO2534
NC_003143.1	RefSeq	CDS	2844093	2844608	.	-	0	ID=cds2339;Name=YP_002347495.1;Parent=gene2443;Dbxref=InterPro:IPR005624,InterPro:IPR010371,UniProtKB%2FTrEMBL:Q0WDZ3,Genbank:YP_002347495.1,GeneID:1175365;gbkey=CDS;product=hypothetical protein;protein_id=YP_002347495.1;transl_table=11
NC_003143.1	RefSeq	gene	2844638	2845969	.	-	.	ID=gene2444;Name=YPO2535;Dbxref=GeneID:1175366;gbkey=Gene;locus_tag=YPO2535
NC_003143.1	RefSeq	CDS	2844638	2845969	.	-	0	ID=cds2340;Name=YP_002347496.1;Parent=gene2444;Dbxref=InterPro:IPR007114,InterPro:IPR011701,UniProtKB%2FTrEMBL:Q0WDZ2,Genbank:YP_002347496.1,GeneID:1175366;gbkey=CDS;product=sugar transporter;protein_id=YP_002347496.1;transl_table=11
NC_003143.1	RefSeq	gene	2846500	2847450	.	-	.	ID=gene2445;Name=YPO2536;Dbxref=GeneID:1175367;gbkey=Gene;locus_tag=YPO2536
NC_003143.1	RefSeq	CDS	2846500	2847450	.	-	0	ID=cds2341;Name=YP_002347497.1;Parent=gene2445;Dbxref=InterPro:IPR006139,InterPro:IPR006140,UniProtKB%2FTrEMBL:Q7CJ80,Genbank:YP_002347497.1,GeneID:1175367;gbkey=CDS;product=D-isomer specific 2-hydroxyacid dehydrogenase family protein;protein_id=YP_002347497.1;transl_table=11
NC_003143.1	RefSeq	region	2846923	2847006	.	-	.	ID=id1847;Note=PS00065 D-isomer specific 2-hydroxyacid dehydrogenases NAD-binding signature.;Dbxref=GeneID:1175367;gbkey=misc_feature
NC_003143.1	RefSeq	gene	2847916	2848908	.	-	.	ID=gene2446;Name=YPO2537;Dbxref=GeneID:1175368;gbkey=Gene;locus_tag=YPO2537
NC_003143.1	RefSeq	CDS	2847916	2848908	.	-	0	ID=cds2342;Name=YP_002347498.1;Parent=gene2446;Dbxref=InterPro:IPR000843,InterPro:IPR001761,InterPro:IPR010982,UniProtKB%2FTrEMBL:Q7CJ81,Genbank:YP_002347498.1,GeneID:1175368;gbkey=CDS;product=LacI family transcriptional regulator;protein_id=YP_002347498.1;transl_table=11
NC_003143.1	RefSeq	region	2848828	2848893	.	-	.	ID=id1848;Note=Predicted helix-turn-helix motif with score 2165 %28%2B6.56 SD%29 at aa 6-27%2C sequence VTLQDIALLAGVTKMTVSRYLR;Dbxref=GeneID:1175368;gbkey=misc_feature
NC_003143.1	RefSeq	region	2848831	2848887	.	-	.	ID=id1849;Note=PS00356 Bacterial regulatory proteins%2C lacI family signature.;Dbxref=GeneID:1175368;gbkey=misc_feature
NC_003143.1	RefSeq	gene	2849377	2850660	.	+	.	ID=gene2447;Name=YPO2538;Dbxref=GeneID:1175369;gbkey=Gene;locus_tag=YPO2538
NC_003143.1	RefSeq	CDS	2849377	2850660	.	+	0	ID=cds2343;Name=YP_002347499.1;Parent=gene2447;Dbxref=InterPro:IPR003790,InterPro:IPR013781,UniProtKB%2FTrEMBL:Q7CJ82,Genbank:YP_002347499.1,GeneID:1175369;gbkey=CDS;product=lipoprotein;protein_id=YP_002347499.1;transl_table=11
NC_003143.1	RefSeq	region	2849416	2849448	.	+	.	ID=id1850;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site.;Dbxref=GeneID:1175369;gbkey=misc_feature
NC_003143.1	RefSeq	gene	2851419	2852183	.	+	.	ID=gene2448;Name=idnO;Dbxref=GeneID:1175370;gbkey=Gene;gene=idnO;locus_tag=YPO2539
NC_003143.1	RefSeq	CDS	2851419	2852183	.	+	0	ID=cds2344;Name=YP_002347500.1;Parent=gene2448;Note=Involved in the nonphosphorylative%2C ketogenic oxidation of glucose and oxidizes gluconate to 5-ketogluconate;Dbxref=InterPro:IPR002198,InterPro:IPR002347,UniProtKB%2FTrEMBL:Q0WDY8,Genbank:YP_002347500.1,GeneID:1175370;gbkey=CDS;gene=idnO;product=gluconate 5-dehydrogenase;protein_id=YP_002347500.1;transl_table=11
NC_003143.1	RefSeq	region	2851851	2851937	.	+	.	ID=id1851;Note=PS00061 Short-chain dehydrogenases%2Freductases family signature.;Dbxref=GeneID:1175370;gbkey=misc_feature;gene=idnO
NC_003143.1	RefSeq	gene	2852232	2852768	.	+	.	ID=gene2449;Name=gntV;Dbxref=GeneID:1175371;gbkey=Gene;gene=gntV;gene_synonym=idnK;locus_tag=YPO2540
NC_003143.1	RefSeq	CDS	2852232	2852768	.	+	0	ID=cds2345;Name=YP_002347501.1;Parent=gene2449;Dbxref=InterPro:IPR000623,InterPro:IPR006001,UniProtKB%2FTrEMBL:Q7CJ83,Genbank:YP_002347501.1,GeneID:1175371;gbkey=CDS;gene=gntV;product=thermosensitive gluconokinase;protein_id=YP_002347501.1;transl_table=11
NC_003143.1	RefSeq	region	2852259	2852282	.	+	.	ID=id1852;Note=PS00017 ATP%2FGTP-binding site motif A %28P-loop%29.;Dbxref=GeneID:1175371;gbkey=misc_feature;gene=gntV
NC_003143.1	RefSeq	gene	2852846	2853313	.	+	.	ID=gene2450;Name=YPO2541;Dbxref=GeneID:1175372;gbkey=Gene;locus_tag=YPO2541
NC_003143.1	RefSeq	CDS	2852846	2853313	.	+	0	ID=cds2346;Name=YP_002347502.1;Parent=gene2450;Dbxref=InterPro:IPR004375,UniProtKB%2FTrEMBL:Q74T40,Genbank:YP_002347502.1,GeneID:1175372;gbkey=CDS;product=hypothetical protein;protein_id=YP_002347502.1;transl_table=11
NC_003143.1	RefSeq	gene	2853651	2854841	.	-	.	ID=gene2451;Name=YPO2542;Dbxref=GeneID:1175373;gbkey=Gene;locus_tag=YPO2542
NC_003143.1	RefSeq	CDS	2853651	2854841	.	-	0	ID=cds2347;Name=YP_002347503.1;Parent=gene2451;Dbxref=UniProtKB%2FTrEMBL:Q0WDY5,Genbank:YP_002347503.1,GeneID:1175373;gbkey=CDS;product=hypothetical protein;protein_id=YP_002347503.1;transl_table=11
NC_003143.1	RefSeq	gene	2855077	2856540	.	-	.	ID=gene2452;Name=nuoN;Dbxref=GeneID:1175374;gbkey=Gene;gene=nuoN;locus_tag=YPO2543
NC_003143.1	RefSeq	CDS	2855077	2856540	.	-	0	ID=cds2348;Name=YP_002347504.1;Parent=gene2452;Note=Catalyzes the transfer of electrons from NADH to quinone;Dbxref=InterPro:IPR001750,InterPro:IPR010096,UniProtKB%2FSwiss-Prot:Q7CJ84,UniProtKB%2FTrEMBL:Q7CJ84,Genbank:YP_002347504.1,GeneID:1175374;gbkey=CDS;gene=nuoN;product=NADH dehydrogenase subunit N;protein_id=YP_002347504.1;transl_table=11
NC_003143.1	RefSeq	gene	2856547	2858079	.	-	.	ID=gene2453;Name=nuoM;Dbxref=GeneID:1175375;gbkey=Gene;gene=nuoM;locus_tag=YPO2544
NC_003143.1	RefSeq	CDS	2856547	2858079	.	-	0	ID=cds2349;Name=YP_002347505.1;Parent=gene2453;Note=Catalyzes the transfer of electrons from NADH to quinone;Dbxref=InterPro:IPR001750,InterPro:IPR003918,InterPro:IPR010227,UniProtKB%2FTrEMBL:Q7CJ85,Genbank:YP_002347505.1,GeneID:1175375;gbkey=CDS;gene=nuoM;product=NADH dehydrogenase subunit M;protein_id=YP_002347505.1;transl_table=11
NC_003143.1	RefSeq	gene	2858119	2859963	.	-	.	ID=gene2454;Name=nuoL;Dbxref=GeneID:1175376;gbkey=Gene;gene=nuoL;locus_tag=YPO2545
NC_003143.1	RefSeq	CDS	2858119	2859963	.	-	0	ID=cds2350;Name=YP_002347506.1;Parent=gene2454;Note=Catalyzes the transfer of electrons from NADH to ubiquinone;Dbxref=InterPro:IPR001516,InterPro:IPR001750,InterPro:IPR003916,InterPro:IPR003945,UniProtKB%2FTrEMBL:Q7CJ86,Genbank:YP_002347506.1,GeneID:1175376;gbkey=CDS;gene=nuoL;product=NADH dehydrogenase subunit L;protein_id=YP_002347506.1;transl_table=11
NC_003143.1	RefSeq	gene	2859960	2860262	.	-	.	ID=gene2455;Name=nuoK;Dbxref=GeneID:1175377;gbkey=Gene;gene=nuoK;locus_tag=YPO2546
NC_003143.1	RefSeq	CDS	2859960	2860262	.	-	0	ID=cds2351;Name=YP_002347507.1;Parent=gene2455;Note=Catalyzes the transfer of electrons from NADH to quinone;Dbxref=InterPro:IPR001133,InterPro:IPR003214,InterPro:IPR003215,UniProtKB%2FTrEMBL:Q7CJ87,Genbank:YP_002347507.1,GeneID:1175377;gbkey=CDS;gene=nuoK;product=NADH dehydrogenase subunit K;protein_id=YP_002347507.1;transl_table=11
NC_003143.1	RefSeq	gene	2860259	2860804	.	-	.	ID=gene2456;Name=nuoJ;Dbxref=GeneID:1175378;gbkey=Gene;gene=nuoJ;locus_tag=YPO2547
NC_003143.1	RefSeq	CDS	2860259	2860804	.	-	0	ID=cds2352;Name=YP_002347508.1;Parent=gene2456;Note=Catalyzes the transfer of electrons from NADH to quinone;Dbxref=InterPro:IPR001457,UniProtKB%2FTrEMBL:Q7CJ88,Genbank:YP_002347508.1,GeneID:1175378;gbkey=CDS;gene=nuoJ;product=NADH dehydrogenase subunit J;protein_id=YP_002347508.1;transl_table=11
NC_003143.1	RefSeq	gene	2860817	2861359	.	-	.	ID=gene2457;Name=nuoI;Dbxref=GeneID:1175379;gbkey=Gene;gene=nuoI;locus_tag=YPO2548
NC_003143.1	RefSeq	CDS	2860817	2861359	.	-	0	ID=cds2353;Name=YP_002347509.1;Parent=gene2457;Note=Catalyzes the transfer of electrons from NADH to quinone;Dbxref=InterPro:IPR001450,InterPro:IPR009051,InterPro:IPR010226,UniProtKB%2FTrEMBL:Q7CJ89,Genbank:YP_002347509.1,GeneID:1175379;gbkey=CDS;gene=nuoI;product=NADH dehydrogenase subunit I;protein_id=YP_002347509.1;transl_table=11
NC_003143.1	RefSeq	region	2861030	2861065	.	-	.	ID=id1853;Note=PS00198 4Fe-4S ferredoxins%2C iron-sulfur binding region signature.;Dbxref=GeneID:1175379;gbkey=misc_feature;gene=nuoI
NC_003143.1	RefSeq	region	2861147	2861182	.	-	.	ID=id1854;Note=PS00198 4Fe-4S ferredoxins%2C iron-sulfur binding region signature.;Dbxref=GeneID:1175379;gbkey=misc_feature;gene=nuoI
NC_003143.1	RefSeq	gene	2861374	2862351	.	-	.	ID=gene2458;Name=nuoH;Dbxref=GeneID:1175380;gbkey=Gene;gene=nuoH;locus_tag=YPO2549
NC_003143.1	RefSeq	CDS	2861374	2862351	.	-	0	ID=cds2354;Name=YP_002347510.1;Parent=gene2458;Note=Catalyzes the transfer of electrons from NADH to quinone;Dbxref=InterPro:IPR001694,UniProtKB%2FTrEMBL:Q0WDX8,Genbank:YP_002347510.1,GeneID:1175380;gbkey=CDS;gene=nuoH;product=NADH dehydrogenase subunit H;protein_id=YP_002347510.1;transl_table=11
NC_003143.1	RefSeq	region	2861680	2861721	.	-	.	ID=id1855;Note=PS00668 Respiratory-chain NADH dehydrogenase subunit 1 signature 2.;Dbxref=GeneID:1175380;gbkey=misc_feature;gene=nuoH
NC_003143.1	RefSeq	region	2862139	2862186	.	-	.	ID=id1856;Note=PS00667 Respiratory-chain NADH dehydrogenase subunit 1 signature 1.;Dbxref=GeneID:1175380;gbkey=misc_feature;gene=nuoH
NC_003143.1	RefSeq	gene	2862348	2865092	.	-	.	ID=gene2459;Name=nuoG;Dbxref=GeneID:1175381;gbkey=Gene;gene=nuoG;locus_tag=YPO2550
NC_003143.1	RefSeq	CDS	2862348	2865092	.	-	0	ID=cds2355;Name=YP_002347511.1;Parent=gene2459;Note=Catalyzes the transfer of electrons from NADH to quinone;Dbxref=InterPro:IPR000283,InterPro:IPR001041,InterPro:IPR006058,InterPro:IPR006657,InterPro:IPR006963,InterPro:IPR009010,InterPro:IPR010228,InterPro:IPR012675,UniProtKB%2FTrEMBL:Q0WDX7,Genbank:YP_002347511.1,GeneID:1175381;gbkey=CDS;gene=nuoG;product=NADH dehydrogenase subunit G;protein_id=YP_002347511.1;transl_table=11
NC_003143.1	RefSeq	region	2864613	2864645	.	-	.	ID=id1857;Note=PS00643 Respiratory-chain NADH dehydrogenase 75 Kd subunit signature 3.;Dbxref=GeneID:1175381;gbkey=misc_feature;gene=nuoG
NC_003143.1	RefSeq	region	2864748	2864786	.	-	.	ID=id1858;Note=PS00642 Respiratory-chain NADH dehydrogenase 75 Kd subunit signature 2.;Dbxref=GeneID:1175381;gbkey=misc_feature;gene=nuoG
NC_003143.1	RefSeq	region	2864949	2865002	.	-	.	ID=id1859;Note=PS00641 Respiratory-chain NADH dehydrogenase 75 Kd subunit signature 1.;Dbxref=GeneID:1175381;gbkey=misc_feature;gene=nuoG
NC_003143.1	RefSeq	gene	2865179	2866564	.	-	.	ID=gene2460;Name=nuoF;Dbxref=GeneID:1175382;gbkey=Gene;gene=nuoF;locus_tag=YPO2551
NC_003143.1	RefSeq	CDS	2865179	2866564	.	-	0	ID=cds2356;Name=YP_002347512.1;Parent=gene2460;Note=shuttles electrons from NADH%2C via FMN and iron-sulfur %28Fe-S%29 centers%2C to quinones in the respiratory chain%3B NuoF is part of the soluble NADH dehydrogenase fragment%2C which represents the electron input part of NADH dehydrogenase;Dbxref=InterPro:IPR001949,InterPro:IPR011537,InterPro:IPR011538,UniProtKB%2FTrEMBL:Q7CJ91,Genbank:YP_002347512.1,GeneID:1175382;gbkey=CDS;gene=nuoF;product=NADH dehydrogenase I subunit F;protein_id=YP_002347512.1;transl_table=11
NC_003143.1	RefSeq	region	2865458	2865493	.	-	.	ID=id1860;Note=PS00645 Respiratory-chain NADH dehydrogenase 51 Kd subunit signature 2.;Dbxref=GeneID:1175382;gbkey=misc_feature;gene=nuoF
NC_003143.1	RefSeq	region	2865977	2866024	.	-	.	ID=id1861;Note=PS00644 Respiratory-chain NADH dehydrogenase 51 Kd subunit signature 1.;Dbxref=GeneID:1175382;gbkey=misc_feature;gene=nuoF
NC_003143.1	RefSeq	gene	2866561	2867079	.	-	.	ID=gene2461;Name=nuoE;Dbxref=GeneID:1175383;gbkey=Gene;gene=nuoE;locus_tag=YPO2552
NC_003143.1	RefSeq	CDS	2866561	2867079	.	-	0	ID=cds2357;Name=YP_002347513.1;Parent=gene2461;Note=Catalyzes the transfer of electrons from NADH to quinone;Dbxref=InterPro:IPR002023,InterPro:IPR012335,InterPro:IPR012336,UniProtKB%2FTrEMBL:Q0WDX5,Genbank:YP_002347513.1,GeneID:1175383;gbkey=CDS;gene=nuoE;product=NADH dehydrogenase subunit E;protein_id=YP_002347513.1;transl_table=11
NC_003143.1	RefSeq	region	2866639	2866695	.	-	.	ID=id1862;Note=PS01099 Respiratory-chain NADH dehydrogenase 24 Kd subunit signature.;Dbxref=GeneID:1175383;gbkey=misc_feature;gene=nuoE
NC_003143.1	RefSeq	gene	2867127	2868923	.	-	.	ID=gene2462;Name=nuoD;Dbxref=GeneID:1175384;gbkey=Gene;gene=nuoD;locus_tag=YPO2553
NC_003143.1	RefSeq	CDS	2867127	2868923	.	-	0	ID=cds2358;Name=YP_002347514.1;Parent=gene2462;Note=NuoCD%3B NDH-1 shuttles electrons from NADH%2C via FMN and iron-sulfur %28Fe-S%29 centers%2C to quinones in the respiratory chain%3B subunits NuoCD%2C E%2C F%2C and G constitute the peripheral sector of the complex%3B in Escherichia coli this gene encodes a fusion protein of NuoC and NuoD that are found separate in other organisms;Dbxref=InterPro:IPR001135,InterPro:IPR001268,InterPro:IPR010218,InterPro:IPR010219,UniProtKB%2FTrEMBL:Q7CJ92,Genbank:YP_002347514.1,GeneID:1175384;gbkey=CDS;gene=nuoD;product=bifunctional NADH:ubiquinone oxidoreductase subunit C%2FD;protein_id=YP_002347514.1;transl_table=11
NC_003143.1	RefSeq	region	2868138	2868173	.	-	.	ID=id1863;Note=PS00535 Respiratory chain NADH dehydrogenase 49 Kd subunit signature.;Dbxref=GeneID:1175384;gbkey=misc_feature;gene=nuoD
NC_003143.1	RefSeq	gene	2869064	2869741	.	-	.	ID=gene2463;Name=nuoB;Dbxref=GeneID:1175385;gbkey=Gene;gene=nuoB;locus_tag=YPO2554
NC_003143.1	RefSeq	CDS	2869064	2869741	.	-	0	ID=cds2359;Name=YP_002347515.1;Parent=gene2463;Note=The point of entry for the majority of electrons that traverse the respiratory chain eventually resulting in the reduction of oxygen;Dbxref=InterPro:IPR006137,InterPro:IPR006138,UniProtKB%2FTrEMBL:Q7CJ93,Genbank:YP_002347515.1,GeneID:1175385;gbkey=CDS;gene=nuoB;product=NADH dehydrogenase subunit B;protein_id=YP_002347515.1;transl_table=11
NC_003143.1	RefSeq	region	2869247	2869297	.	-	.	ID=id1864;Note=PS01150 Respiratory-chain NADH dehydrogenase 20 Kd subunit signature.;Dbxref=GeneID:1175385;gbkey=misc_feature;gene=nuoB
NC_003143.1	RefSeq	gene	2869843	2870337	.	-	.	ID=gene2464;Name=nuoA;Dbxref=GeneID:1175386;gbkey=Gene;gene=nuoA;locus_tag=YPO2555
NC_003143.1	RefSeq	CDS	2869843	2870337	.	-	0	ID=cds2360;Name=YP_002347516.1;Parent=gene2464;Note=Catalyzes the transfer of electrons from NADH to quinone;Dbxref=InterPro:IPR000440,UniProtKB%2FTrEMBL:Q0WDX2,Genbank:YP_002347516.1,GeneID:1175386;gbkey=CDS;gene=nuoA;product=NADH dehydrogenase subunit A;protein_id=YP_002347516.1;transl_table=11
NC_003143.1	RefSeq	region	2870146	2870193	.	-	.	ID=id1865;Note=PS00012 Phosphopantetheine attachment site.;Dbxref=GeneID:1175386;gbkey=misc_feature;gene=nuoA
NC_003143.1	RefSeq	gene	2871021	2871953	.	-	.	ID=gene2465;Name=hexA;Dbxref=GeneID:1175387;gbkey=Gene;gene=hexA;gene_synonym=pecT;locus_tag=YPO2556
NC_003143.1	RefSeq	CDS	2871021	2871953	.	-	0	ID=cds2361;Name=YP_002347517.1;Parent=gene2465;Dbxref=InterPro:IPR000847,InterPro:IPR005119,UniProtKB%2FTrEMBL:Q7CJ94,Genbank:YP_002347517.1,GeneID:1175387;gbkey=CDS;gene=hexA;product=LysR family transcriptional regulator;protein_id=YP_002347517.1;transl_table=11
NC_003143.1	RefSeq	region	2871783	2871875	.	-	.	ID=id1866;Note=PS00044 Bacterial regulatory proteins%2C lysR family signature.;Dbxref=GeneID:1175387;gbkey=misc_feature;gene=hexA
NC_003143.1	RefSeq	region	2871813	2871878	.	-	.	ID=id1867;Note=Predicted helix-turn-helix motif with score 1312 %28%2B3.66 SD%29 at aa 26-47%2C sequence NTFAAAAAAVCRTQSAVSQQMQ;Dbxref=GeneID:1175387;gbkey=misc_feature;gene=hexA
NC_003143.1	RefSeq	region	2872413	2872436	.	-	.	ID=id1868;Note=PS00017 ATP%2FGTP-binding site motif A %28P-loop%29.;gbkey=misc_feature
NC_003143.1	RefSeq	gene	2872809	2874023	.	+	.	ID=gene2466;Name=aat;Dbxref=GeneID:1175389;gbkey=Gene;gene=aat;locus_tag=YPO2558
NC_003143.1	RefSeq	CDS	2872809	2874023	.	+	0	ID=cds2362;Name=YP_002347519.1;Parent=gene2466;Note=broad specificity%3B family IV%3B in Corynebacterium glutamicum this protein can use glutamate%2C 2-aminobutyrate%2C and aspartate as amino donors and pyruvate as the acceptor;Dbxref=InterPro:IPR001176,InterPro:IPR004839,UniProtKB%2FTrEMBL:Q0WDW9,Genbank:YP_002347519.1,GeneID:1175389;gbkey=CDS;gene=aat;product=aminotransferase;protein_id=YP_002347519.1;transl_table=11
NC_003143.1	RefSeq	gene	2874174	2874767	.	+	.	ID=gene2467;Name=YPO2559;Dbxref=GeneID:1175390;gbkey=Gene;locus_tag=YPO2559
NC_003143.1	RefSeq	CDS	2874174	2874767	.	+	0	ID=cds2363;Name=YP_002347520.1;Parent=gene2467;Dbxref=InterPro:IPR003607,InterPro:IPR006674,UniProtKB%2FTrEMBL:Q0WDW8,Genbank:YP_002347520.1,GeneID:1175390;gbkey=CDS;product=hypothetical protein;protein_id=YP_002347520.1;transl_table=11
NC_003143.1	RefSeq	gene	2874814	2875083	.	-	.	ID=gene2468;Name=YPO2560;Dbxref=GeneID:1175391;gbkey=Gene;locus_tag=YPO2560
NC_003143.1	RefSeq	CDS	2874814	2875083	.	-	0	ID=cds2364;Name=YP_002347521.1;Parent=gene2468;Dbxref=UniProtKB%2FTrEMBL:Q74T23,Genbank:YP_002347521.1,GeneID:1175391;gbkey=CDS;product=hypothetical protein;protein_id=YP_002347521.1;transl_table=11
NC_003143.1	RefSeq	gene	2875110	2876945	.	-	.	ID=gene2469;Name=YPO2561;Dbxref=GeneID:1175392;gbkey=Gene;locus_tag=YPO2561
NC_003143.1	RefSeq	CDS	2875110	2876942	.	-	0	ID=cds2365;Name=YP_002347522.1;Parent=gene2469;Dbxref=InterPro:IPR001898,InterPro:IPR004680,InterPro:IPR006037,UniProtKB%2FTrEMBL:Q0WDW6,Genbank:YP_002347522.1,GeneID:1175392;gbkey=CDS;product=ion transport protein;protein_id=YP_002347522.1;transl_table=11
NC_003143.1	RefSeq	region	2875221	2875271	.	-	.	ID=id1869;Note=PS01271 Sodium:sulfate symporter family signature.;Dbxref=GeneID:1175392;gbkey=misc_feature
NC_003143.1	RefSeq	region	2875851	2875874	.	-	.	ID=id1870;Note=PS00017 ATP%2FGTP-binding site motif A %28P-loop%29.;Dbxref=GeneID:1175392;gbkey=misc_feature
NC_003143.1	RefSeq	gene	2877234	2877890	.	-	.	ID=gene2470;Name=YPO2562;Dbxref=GeneID:1175393;gbkey=Gene;locus_tag=YPO2562
NC_003143.1	RefSeq	CDS	2877234	2877890	.	-	0	ID=cds2366;Name=YP_002347523.1;Parent=gene2470;Dbxref=InterPro:IPR005833,InterPro:IPR005834,InterPro:IPR006402,UniProtKB%2FTrEMBL:Q7CJ95,Genbank:YP_002347523.1,GeneID:1175393;gbkey=CDS;product=phosphatase;protein_id=YP_002347523.1;transl_table=11
NC_003143.1	RefSeq	gene	2878055	2878549	.	-	.	ID=gene2471;Name=YPO2563;Dbxref=GeneID:1175394;gbkey=Gene;locus_tag=YPO2563
NC_003143.1	RefSeq	CDS	2878055	2878549	.	-	0	ID=cds2367;Name=YP_002347524.1;Parent=gene2471;Dbxref=InterPro:IPR005587,UniProtKB%2FTrEMBL:Q0WDW4,Genbank:YP_002347524.1,GeneID:1175394;gbkey=CDS;product=hypothetical protein;protein_id=YP_002347524.1;transl_table=11
NC_003143.1	RefSeq	gene	2878857	2879312	.	-	.	ID=gene2472;Name=YPO2564;Dbxref=GeneID:1175395;gbkey=Gene;locus_tag=YPO2564
NC_003143.1	RefSeq	CDS	2878857	2879312	.	-	0	ID=cds2368;Name=YP_002347525.1;Parent=gene2472;Dbxref=InterPro:IPR007334,UniProtKB%2FTrEMBL:Q0WDW3,Genbank:YP_002347525.1,GeneID:1175395;gbkey=CDS;product=hypothetical protein;protein_id=YP_002347525.1;transl_table=11
NC_003143.1	RefSeq	gene	2879553	2879744	.	+	.	ID=gene2473;Name=YPO2565;Dbxref=GeneID:1175396;gbkey=Gene;locus_tag=YPO2565
NC_003143.1	RefSeq	CDS	2879553	2879744	.	+	0	ID=cds2369;Name=YP_002347526.1;Parent=gene2473;Dbxref=UniProtKB%2FTrEMBL:Q74T20,Genbank:YP_002347526.1,GeneID:1175396;gbkey=CDS;product=hypothetical protein;protein_id=YP_002347526.1;transl_table=11
NC_003143.1	RefSeq	gene	2879734	2880936	.	+	.	ID=gene2474;Name=ackA;Dbxref=GeneID:1175397;gbkey=Gene;gene=ackA;locus_tag=YPO2566
NC_003143.1	RefSeq	CDS	2879734	2880936	.	+	0	ID=cds2370;Name=YP_002347527.1;Parent=gene2474;Note=AckA utilizes acetate and can acetylate CheY which increases signal strength during flagellar rotation%3B utilizes magnesium and ATP%3B also involved in conversion of acetate to aceyl-CoA;Dbxref=InterPro:IPR000890,InterPro:IPR004372,UniProtKB%2FTrEMBL:Q0WDW1,Genbank:YP_002347527.1,GeneID:1175397;gbkey=CDS;gene=ackA;product=acetate kinase;protein_id=YP_002347527.1;transl_table=11
NC_003143.1	RefSeq	region	2879749	2879784	.	+	.	ID=id1871;Note=PS01075 Acetate and butyrate kinases family signature 1.;Dbxref=GeneID:1175397;gbkey=misc_feature;gene=ackA
NC_003143.1	RefSeq	region	2880349	2880402	.	+	.	ID=id1872;Note=PS01076 Acetate and butyrate kinases family signature 2.;Dbxref=GeneID:1175397;gbkey=misc_feature;gene=ackA
NC_003143.1	RefSeq	gene	2881104	2883257	.	+	.	ID=gene2475;Name=pta;Dbxref=GeneID:1175398;gbkey=Gene;gene=pta;locus_tag=YPO2567
NC_003143.1	RefSeq	CDS	2881104	2883257	.	+	0	ID=cds2371;Name=YP_002347528.1;Parent=gene2475;Note=catalyzes the synthesis of acetylphosphate or propionylphosphate from acetyl-CoA or propionyl-CoA and inorganic phosphate%3B when using propionyl-CoA the enzyme is functioning in the anaerobic pathway catabolizing threonine to propionate;Dbxref=InterPro:IPR002505,InterPro:IPR004614,InterPro:IPR010766,UniProtKB%2FTrEMBL:Q7CJ96,Genbank:YP_002347528.1,GeneID:1175398;gbkey=CDS;gene=pta;product=phosphate acetyltransferase;protein_id=YP_002347528.1;transl_table=11
NC_003143.1	RefSeq	gene	2883523	2884557	.	-	.	ID=gene2476;Name=YPO2568;Dbxref=GeneID:1175399;gbkey=Gene;locus_tag=YPO2568
NC_003143.1	RefSeq	CDS	2883523	2884557	.	-	0	ID=cds2372;Name=YP_002347529.1;Parent=gene2476;Dbxref=InterPro:IPR000843,InterPro:IPR001761,InterPro:IPR010982,UniProtKB%2FTrEMBL:Q0WDV9,Genbank:YP_002347529.1,GeneID:1175399;gbkey=CDS;product=LacI family transcriptional regulator;protein_id=YP_002347529.1;transl_table=11
NC_003143.1	RefSeq	region	2884456	2884521	.	-	.	ID=id1873;Note=Predicted helix-turn-helix motif with score 1905 %28%2B5.68 SD%29 at aa 47-68%2C sequence VTLQEVADYAGVGSMTVSRALR;Dbxref=GeneID:1175399;gbkey=misc_feature
NC_003143.1	RefSeq	region	2884459	2884515	.	-	.	ID=id1874;Note=PS00356 Bacterial regulatory proteins%2C lacI family signature.;Dbxref=GeneID:1175399;gbkey=misc_feature
NC_003143.1	RefSeq	gene	2884924	2885367	.	+	.	ID=gene2477;Name=YPO2569;Dbxref=GeneID:1175400;gbkey=Gene;locus_tag=YPO2569
NC_003143.1	RefSeq	CDS	2884924	2885367	.	+	0	ID=cds2373;Name=YP_002347530.1;Parent=gene2477;Dbxref=InterPro:IPR002178,UniProtKB%2FTrEMBL:Q7CJ97,Genbank:YP_002347530.1,GeneID:1175400;gbkey=CDS;product=PTS system transporter subunit IIA;protein_id=YP_002347530.1;transl_table=11
NC_003143.1	RefSeq	gene	2885536	2885790	.	+	.	ID=gene2478;Name=YPO2569a;Dbxref=GeneID:1175401;gbkey=Gene;locus_tag=YPO2569a
NC_003143.1	RefSeq	CDS	2885536	2885790	.	+	0	ID=cds2374;Name=YP_008479719.1;Parent=gene2478;Dbxref=Genbank:YP_008479719.1,GeneID:1175401;gbkey=CDS;product=PTS system transporter subunit IIB;protein_id=YP_008479719.1;transl_table=11
NC_003143.1	RefSeq	repeat_region	2885777	2887091	.	-	.	ID=id1875;Note=insertion sequence:IS285;gbkey=repeat_region
NC_003143.1	RefSeq	repeat_region	2885777	2885805	.	+	.	ID=id1876;Note=IS285 inverted repeat;gbkey=repeat_region
NC_003143.1	RefSeq	gene	2885812	2887020	.	-	.	ID=gene2479;Name=y1062;Dbxref=GeneID:1175402;gbkey=Gene;gene=y1062;gene_synonym=ypmt1.80C;locus_tag=YPO2571
NC_003143.1	RefSeq	CDS	2885812	2887020	.	-	0	ID=cds2375;Name=YP_002347531.1;Parent=gene2479;Dbxref=InterPro:IPR001207,UniProtKB%2FTrEMBL:Q7ARB0,Genbank:YP_002347531.1,GeneID:1175402;gbkey=CDS;gene=y1062;product=transposase for the IS285 insertion element;protein_id=YP_002347531.1;transl_table=11
NC_003143.1	RefSeq	region	2886253	2886327	.	-	.	ID=id1877;Note=PS01007 Transposases%2C Mutator family%2C signature.;Dbxref=GeneID:1175402;gbkey=misc_feature;gene=y1062
NC_003143.1	RefSeq	repeat_region	2887063	2887091	.	-	.	ID=id1878;Note=IS285 inverted repeat;gbkey=repeat_region
NC_003143.1	RefSeq	gene	2887093	2887932	.	-	.	ID=gene2480;Name=pbpC;Dbxref=GeneID:1175403;gbkey=Gene;gene=pbpC;locus_tag=YPO2572;pseudo=true
NC_003143.1	RefSeq	region	2887093	2887932	.	-	.	ID=id1879;Note=Similar to Escherichia coli bifunctional penicillin-binding protein 1C%2C PbpC SW:PBPC_ECOLI %28P76577%29 %28770 aa%29 fasta scores: E%28%29: 5.8e-25%2C 35.4%25 id in 285 aa%2Cand to Xylella fastidiosa bifunctional penicillin binding protein 1C%2C XF2235 TR:Q9PBA9 %28EMBL:AE004036%29 %28796 aa%29 fasta scores: E%28%29: 1.1e-24%2C 39.9%25 id in 263 aa. The CDS is truncated%2C at codon 280%2C by the insertion of the downstream IS285 element.;Dbxref=GeneID:1175403;gbkey=misc_feature;gene=pbpC;pseudo=true
NC_003143.1	RefSeq	gene	2887989	2894003	.	-	.	ID=gene2481;Name=YPO2573;Dbxref=GeneID:1175404;gbkey=Gene;locus_tag=YPO2573
NC_003143.1	RefSeq	CDS	2887989	2894003	.	-	0	ID=cds2376;Name=YP_002347532.1;Parent=gene2481;Dbxref=InterPro:IPR002890,InterPro:IPR008930,InterPro:IPR011625,UniProtKB%2FTrEMBL:Q0WDV6,Genbank:YP_002347532.1,GeneID:1175404;gbkey=CDS;product=hypothetical protein;protein_id=YP_002347532.1;transl_table=11
NC_003143.1	RefSeq	gene	2894374	2894928	.	-	.	ID=gene2482;Name=YPO2574;Dbxref=GeneID:1175405;gbkey=Gene;locus_tag=YPO2574
NC_003143.1	RefSeq	CDS	2894374	2894928	.	-	0	ID=cds2377;Name=YP_002347533.1;Parent=gene2482;Note=No significant database matches to the full length CDS;Dbxref=InterPro:IPR009898,UniProtKB%2FTrEMBL:Q0WDV5,Genbank:YP_002347533.1,GeneID:1175405;gbkey=CDS;product=hypothetical protein;protein_id=YP_002347533.1;transl_table=11
NC_003143.1	RefSeq	gene	2895617	2896471	.	-	.	ID=gene2483;Name=YPO2576;Dbxref=GeneID:1175406;gbkey=Gene;locus_tag=YPO2576
NC_003143.1	RefSeq	CDS	2895617	2896471	.	-	0	ID=cds2378;Name=YP_002347534.1;Parent=gene2483;Dbxref=InterPro:IPR000281,InterPro:IPR001347,UniProtKB%2FTrEMBL:Q7CJW7,Genbank:YP_002347534.1,GeneID:1175406;gbkey=CDS;product=hypothetical protein;protein_id=YP_002347534.1;transl_table=11
NC_003143.1	RefSeq	gene	2896777	2898303	.	+	.	ID=gene2484;Name=YPO2577;Dbxref=GeneID:1175407;gbkey=Gene;locus_tag=YPO2577
NC_003143.1	RefSeq	CDS	2896777	2898303	.	+	0	ID=cds2379;Name=YP_002347535.1;Parent=gene2484;Dbxref=InterPro:IPR002086,InterPro:IPR010061,InterPro:IPR012303,UniProtKB%2FTrEMBL:Q7CJW6,Genbank:YP_002347535.1,GeneID:1175407;gbkey=CDS;product=aldehyde dehydrogenase;protein_id=YP_002347535.1;transl_table=11
NC_003143.1	RefSeq	region	2897617	2897652	.	+	.	ID=id1880;Note=PS00070 Aldehyde dehydrogenases cysteine active site.;Dbxref=GeneID:1175407;gbkey=misc_feature
NC_003143.1	RefSeq	gene	2898317	2900263	.	+	.	ID=gene2485;Name=YPO2578;Dbxref=GeneID:1175408;gbkey=Gene;locus_tag=YPO2578
NC_003143.1	RefSeq	CDS	2898317	2900263	.	+	0	ID=cds2380;Name=YP_002347536.1;Parent=gene2485;Dbxref=InterPro:IPR000399,InterPro:IPR011766,InterPro:IPR012000,InterPro:IPR012001,UniProtKB%2FTrEMBL:Q0WDV2,Genbank:YP_002347536.1,GeneID:1175408;gbkey=CDS;product=thiamine pyrophosphate-dependent protein;protein_id=YP_002347536.1;transl_table=11
NC_003143.1	RefSeq	region	2898587	2898655	.	+	.	ID=id1881;Note=1 probable transmembrane helix predicted;Dbxref=GeneID:1175408;gbkey=misc_feature
NC_003143.1	RefSeq	region	2899754	2899813	.	+	.	ID=id1882;Note=PS00187 Thiamine pyrophosphate enzymes signature.;Dbxref=GeneID:1175408;gbkey=misc_feature
NC_003143.1	RefSeq	gene	2900557	2901542	.	+	.	ID=gene2486;Name=YPO2579;Dbxref=GeneID:1175409;gbkey=Gene;locus_tag=YPO2579;pseudo=true
NC_003143.1	RefSeq	region	2901052	2901063	.	+	.	ID=id1883;Note=PS00294 Prenyl group binding site %28CAAX box%29.;Dbxref=GeneID:1175409;gbkey=misc_feature
NC_003143.1	RefSeq	repeat_region	2901552	2901605	.	+	.	ID=id1884;Note=3 x 18 bp repeats;gbkey=repeat_region
NC_003143.1	RefSeq	gene	2901668	2902597	.	+	.	ID=gene2487;Name=YPO2581;Dbxref=GeneID:1175410;gbkey=Gene;locus_tag=YPO2581
NC_003143.1	RefSeq	CDS	2901668	2902597	.	+	0	ID=cds2381;Name=YP_002347537.1;Parent=gene2487;Dbxref=InterPro:IPR001761,UniProtKB%2FTrEMBL:Q74VY5,Genbank:YP_002347537.1,GeneID:1175410;gbkey=CDS;product=sugar-binding protein;protein_id=YP_002347537.1;transl_table=11
NC_003143.1	RefSeq	gene	2902646	2904193	.	+	.	ID=gene2488;Name=YPO2582;Dbxref=GeneID:1175411;gbkey=Gene;locus_tag=YPO2582
NC_003143.1	RefSeq	CDS	2902646	2904193	.	+	0	ID=cds2382;Name=YP_002347538.1;Parent=gene2488;Dbxref=InterPro:IPR003439,InterPro:IPR003593,UniProtKB%2FTrEMBL:Q0WDV0,Genbank:YP_002347538.1,GeneID:1175411;gbkey=CDS;product=sugar transport ATP-binding protein;protein_id=YP_002347538.1;transl_table=11
NC_003143.1	RefSeq	region	2902757	2902780	.	+	.	ID=id1885;Note=PS00017 ATP%2FGTP-binding site motif A %28P-loop%29.;Dbxref=GeneID:1175411;gbkey=misc_feature
NC_003143.1	RefSeq	gene	2904205	2905233	.	+	.	ID=gene2489;Name=YPO2583;Dbxref=GeneID:1175412;gbkey=Gene;locus_tag=YPO2583
NC_003143.1	RefSeq	CDS	2904205	2905233	.	+	0	ID=cds2383;Name=YP_002347539.1;Parent=gene2489;Dbxref=InterPro:IPR001851,UniProtKB%2FTrEMBL:Q7CJW5,Genbank:YP_002347539.1,GeneID:1175412;gbkey=CDS;product=sugar transport system permease;protein_id=YP_002347539.1;transl_table=11
NC_003143.1	RefSeq	gene	2905257	2906390	.	+	.	ID=gene2490;Name=YPO2584;Dbxref=GeneID:1175413;gbkey=Gene;locus_tag=YPO2584
NC_003143.1	RefSeq	CDS	2905257	2906390	.	+	0	ID=cds2384;Name=YP_002347540.1;Parent=gene2490;Dbxref=InterPro:IPR000683,InterPro:IPR004104,UniProtKB%2FTrEMBL:Q0WDU8,Genbank:YP_002347540.1,GeneID:1175413;gbkey=CDS;product=hypothetical protein;protein_id=YP_002347540.1;transl_table=11
NC_003143.1	RefSeq	gene	2906422	2908392	.	+	.	ID=gene2491;Name=YPO2585;Dbxref=GeneID:1175414;gbkey=Gene;locus_tag=YPO2585
NC_003143.1	RefSeq	CDS	2906422	2908392	.	+	0	ID=cds2385;Name=YP_002347541.1;Parent=gene2491;Dbxref=InterPro:IPR002173,InterPro:IPR011611,UniProtKB%2FTrEMBL:Q7CJW4,Genbank:YP_002347541.1,GeneID:1175414;gbkey=CDS;product=carbohydrate kinase;protein_id=YP_002347541.1;transl_table=11
NC_003143.1	RefSeq	region	2907304	2907345	.	+	.	ID=id1886;Note=PS00584 pfkB family of carbohydrate kinases signature 2.;Dbxref=GeneID:1175414;gbkey=misc_feature
NC_003143.1	RefSeq	gene	2908545	2909465	.	+	.	ID=gene2492;Name=YPO2586;Dbxref=GeneID:1175415;gbkey=Gene;locus_tag=YPO2586
NC_003143.1	RefSeq	CDS	2908545	2909465	.	+	0	ID=cds2386;Name=YP_002347542.1;Parent=gene2492;Dbxref=InterPro:IPR012307,UniProtKB%2FTrEMBL:Q0WDU6,Genbank:YP_002347542.1,GeneID:1175415;gbkey=CDS;product=hypothetical protein;protein_id=YP_002347542.1;transl_table=11
NC_003143.1	RefSeq	gene	2909475	2910290	.	+	.	ID=gene2493;Name=YPO2587;Dbxref=GeneID:1175416;gbkey=Gene;locus_tag=YPO2587
NC_003143.1	RefSeq	CDS	2909475	2910290	.	+	0	ID=cds2387;Name=YP_002347543.1;Parent=gene2493;Dbxref=InterPro:IPR010669,InterPro:IPR011051,InterPro:IPR012185,UniProtKB%2FTrEMBL:Q7CJW3,Genbank:YP_002347543.1,GeneID:1175416;gbkey=CDS;product=hypothetical protein;protein_id=YP_002347543.1;transl_table=11
NC_003143.1	RefSeq	gene	2910755	2912650	.	+	.	ID=gene2494;Name=YPO2588;Dbxref=GeneID:1175417;gbkey=Gene;locus_tag=YPO2588
NC_003143.1	RefSeq	CDS	2910755	2912650	.	+	0	ID=cds2388;Name=YP_002347544.1;Parent=gene2494;Dbxref=InterPro:IPR001140,InterPro:IPR003439,InterPro:IPR003593,InterPro:IPR011527,UniProtKB%2FTrEMBL:Q74VZ2,Genbank:YP_002347544.1,GeneID:1175417;gbkey=CDS;product=ABC transport protein;protein_id=YP_002347544.1;transl_table=11
NC_003143.1	RefSeq	region	2911994	2912017	.	+	.	ID=id1887;Note=PS00017 ATP%2FGTP-binding site motif A %28P-loop%29.;Dbxref=GeneID:1175417;gbkey=misc_feature
NC_003143.1	RefSeq	region	2912306	2912350	.	+	.	ID=id1888;Note=PS00211 ABC transporters family signature.;Dbxref=GeneID:1175417;gbkey=misc_feature
NC_003143.1	RefSeq	gene	2912666	2912953	.	-	.	ID=gene2495;Name=YPO2589;Dbxref=GeneID:1175418;gbkey=Gene;locus_tag=YPO2589
NC_003143.1	RefSeq	CDS	2912666	2912953	.	-	0	ID=cds2389;Name=YP_002347545.1;Parent=gene2495;Dbxref=InterPro:IPR007138,InterPro:IPR011008,UniProtKB%2FTrEMBL:Q7CJW2,Genbank:YP_002347545.1,GeneID:1175418;gbkey=CDS;product=hypothetical protein;protein_id=YP_002347545.1;transl_table=11
NC_003143.1	RefSeq	gene	2913396	2913590	.	+	.	ID=gene2496;Name=YPO2590;Dbxref=GeneID:1175419;gbkey=Gene;locus_tag=YPO2590
NC_003143.1	RefSeq	CDS	2913396	2913590	.	+	0	ID=cds2390;Name=YP_002347546.1;Parent=gene2496;Note=no significant database hits;Dbxref=UniProtKB%2FTrEMBL:Q7CJW1,Genbank:YP_002347546.1,GeneID:1175419;gbkey=CDS;product=hypothetical protein;protein_id=YP_002347546.1;transl_table=11
NC_003143.1	RefSeq	gene	2913608	2913790	.	-	.	ID=gene2497;Name=YPO2591;Dbxref=GeneID:1175420;gbkey=Gene;locus_tag=YPO2591
NC_003143.1	RefSeq	CDS	2913608	2913790	.	-	0	ID=cds2391;Name=YP_002347547.1;Parent=gene2497;Note=no significant database hits;Dbxref=UniProtKB%2FTrEMBL:Q7CJW0,Genbank:YP_002347547.1,GeneID:1175420;gbkey=CDS;product=hypothetical protein;protein_id=YP_002347547.1;transl_table=11
NC_003143.1	RefSeq	gene	2913972	2914937	.	-	.	ID=gene2498;Name=YPO2592;Dbxref=GeneID:1175421;gbkey=Gene;locus_tag=YPO2592
NC_003143.1	RefSeq	CDS	2913972	2914937	.	-	0	ID=cds2392;Name=YP_002347548.1;Parent=gene2498;Dbxref=UniProtKB%2FTrEMBL:Q7CJV9,Genbank:YP_002347548.1,GeneID:1175421;gbkey=CDS;product=hypothetical protein;protein_id=YP_002347548.1;transl_table=11
NC_003143.1	RefSeq	gene	2915360	2915977	.	+	.	ID=gene2499;Name=YPO2593;Dbxref=GeneID:1175422;gbkey=Gene;locus_tag=YPO2593
NC_003143.1	RefSeq	CDS	2915360	2915977	.	+	0	ID=cds2393;Name=YP_002347549.1;Parent=gene2499;Dbxref=InterPro:IPR000792,InterPro:IPR011991,UniProtKB%2FTrEMBL:Q7CJV8,Genbank:YP_002347549.1,GeneID:1175422;gbkey=CDS;product=LuxR family transcriptional regulator;protein_id=YP_002347549.1;transl_table=11
NC_003143.1	RefSeq	region	2915846	2915911	.	+	.	ID=id1889;Note=Predicted helix-turn-helix motif with score 1182 %28%2B3.21 SD%29 at aa 163-184%2C sequence FSGGDIARILKKSEKTVSGQKR;Dbxref=GeneID:1175422;gbkey=misc_feature
NC_003143.1	RefSeq	gene	2916297	2916787	.	-	.	ID=gene2500;Name=YPO2594;Dbxref=GeneID:1175423;gbkey=Gene;locus_tag=YPO2594;pseudo=true
NC_003143.1	RefSeq	gene	2916969	2917309	.	+	.	ID=gene2501;Name=YPO2594a;Dbxref=GeneID:16744767;gbkey=Gene;locus_tag=YPO2594a
NC_003143.1	RefSeq	ncRNA	2916969	2917309	.	+	.	ID=rna45;Parent=gene2501;Dbxref=GeneID:16744767;gbkey=ncRNA;ncrna_class=other;product=ncRNA-cspA thermoregulator
NC_003143.1	RefSeq	exon	2916969	2917309	.	+	.	ID=id1890;Parent=rna45;Dbxref=GeneID:16744767;gbkey=ncRNA;ncrna_class=other;product=ncRNA-cspA thermoregulator
NC_003143.1	RefSeq	gene	2917054	2917263	.	+	.	ID=gene2502;Name=cspE;Dbxref=GeneID:1175424;gbkey=Gene;gene=cspE;locus_tag=YPO2595
NC_003143.1	RefSeq	CDS	2917054	2917263	.	+	0	ID=cds2394;Name=YP_002347551.1;Parent=gene2502;Note=member of the CspA family%3B constitutively expressed RNA%2FssDNA-binding protein%3B functions in helping cells adapt to low temperature%3B aids nucleic acid melting%3B participates in gene regulation%3B can act as a transcription antiterminator;Dbxref=InterPro:IPR002059,InterPro:IPR008994,InterPro:IPR011129,InterPro:IPR012156,InterPro:IPR012340,UniProtKB%2FTrEMBL:Q0WDT7,Genbank:YP_002347551.1,GeneID:1175424;gbkey=CDS;gene=cspE;product=cold shock protein CspE;protein_id=YP_002347551.1;transl_table=11
NC_003143.1	RefSeq	region	2917102	2917161	.	+	.	ID=id1891;Note=PS00352 %27Cold-shock%27 DNA-binding domain signature.;Dbxref=GeneID:1175424;gbkey=misc_feature;gene=cspE
NC_003143.1	RefSeq	gene	2917686	2918069	.	-	.	ID=gene2503;Name=crcB;Dbxref=GeneID:1175425;gbkey=Gene;gene=crcB;locus_tag=YPO2596
NC_003143.1	RefSeq	CDS	2917686	2918069	.	-	0	ID=cds2395;Name=YP_002347552.1;Parent=gene2503;Note=may be involved in chromosome condensation%3B overexpression in Escherichia coli protects against decondensation by camphor%3B overexpressing the protein results in an increase in supercoiling;Dbxref=InterPro:IPR003691,UniProtKB%2FTrEMBL:Q0WDT6,Genbank:YP_002347552.1,GeneID:1175425;gbkey=CDS;gene=crcB;product=camphor resistance protein CrcB;protein_id=YP_002347552.1;transl_table=11
NC_003143.1	RefSeq	gene	2918636	2918893	.	+	.	ID=gene2504;Name=tatE;Dbxref=GeneID:1175426;gbkey=Gene;gene=tatE;locus_tag=YPO2597
NC_003143.1	RefSeq	CDS	2918636	2918893	.	+	0	ID=cds2396;Name=YP_002347553.1;Parent=gene2504;Note=TatE%3B similar to TatA and found in some proteobacteria%3B part of system that translocates proteins with a conserved twin arginine motif across the inner membrane%3B capable of translocating folded substrates typically those with bound cofactors%3B similar to a protein import system in thylakoid membranes;Dbxref=InterPro:IPR003369,InterPro:IPR006312,UniProtKB%2FTrEMBL:Q0WDT5,Genbank:YP_002347553.1,GeneID:1175426;gbkey=CDS;gene=tatE;product=twin-arginine translocation protein TatA;protein_id=YP_002347553.1;transl_table=11
NC_003143.1	RefSeq	gene	2919074	2920039	.	-	.	ID=gene2505;Name=lipA;Dbxref=GeneID:1175427;gbkey=Gene;gene=lipA;locus_tag=YPO2598
NC_003143.1	RefSeq	CDS	2919074	2920039	.	-	0	ID=cds2397;Name=YP_002347554.1;Parent=gene2505;Note=catalyzes the radical-mediated insertion of two sulfur atoms into an acyl carrier protein %28ACP%29 bound to an octanoyl group to produce a lipoyl group;Dbxref=InterPro:IPR003698,InterPro:IPR006638,InterPro:IPR007197,UniProtKB%2FTrEMBL:Q0WDT4,Genbank:YP_002347554.1,GeneID:1175427;gbkey=CDS;gene=lipA;product=lipoyl synthase;protein_id=YP_002347554.1;transl_table=11
NC_003143.1	RefSeq	gene	2920232	2920921	.	-	.	ID=gene2506;Name=lipB;Dbxref=GeneID:1175428;gbkey=Gene;gene=lipB;locus_tag=YPO2599
NC_003143.1	RefSeq	CDS	2920232	2920921	.	-	0	ID=cds2398;Name=YP_002347555.1;Parent=gene2506;Note=lipoyl%2Foctanoyltransferase%3B catalyzes the transfer of the lipoyl%2Foctanoyl moiety of lipoyl%2Foctanoyl-ACP onto lipoate-dependent enzymes like pyruvate dehydrogenase and the glycine cleavage system H protein;Dbxref=InterPro:IPR000544,InterPro:IPR004143,UniProtKB%2FTrEMBL:Q0WDT3,Genbank:YP_002347555.1,GeneID:1175428;gbkey=CDS;gene=lipB;product=lipoate-protein ligase B;protein_id=YP_002347555.1;transl_table=11
NC_003143.1	RefSeq	region	2920664	2920711	.	-	.	ID=id1892;Note=PS01313 Lipoate-protein ligase B signature.;Dbxref=GeneID:1175428;gbkey=misc_feature;gene=lipB
NC_003143.1	RefSeq	gene	2921145	2921408	.	-	.	ID=gene2507;Name=YPO2600;Dbxref=GeneID:1175429;gbkey=Gene;locus_tag=YPO2600
NC_003143.1	RefSeq	CDS	2921145	2921408	.	-	0	ID=cds2399;Name=YP_002347556.1;Parent=gene2507;Dbxref=InterPro:IPR007454,UniProtKB%2FTrEMBL:Q0WDT2,Genbank:YP_002347556.1,GeneID:1175429;gbkey=CDS;product=hypothetical protein;protein_id=YP_002347556.1;transl_table=11
NC_003143.1	RefSeq	gene	2921606	2922808	.	-	.	ID=gene2508;Name=dacA;Dbxref=GeneID:1175430;gbkey=Gene;gene=dacA;locus_tag=YPO2601
NC_003143.1	RefSeq	CDS	2921606	2922808	.	-	0	ID=cds2400;Name=YP_002347557.1;Parent=gene2508;Note=penicillin-binding protein 5%3B removes C-terminal D-alanyl residues from sugar-peptide cell wall precursors;Dbxref=InterPro:IPR001967,InterPro:IPR012338,InterPro:IPR012907,UniProtKB%2FTrEMBL:Q7CJV7,Genbank:YP_002347557.1,GeneID:1175430;gbkey=CDS;gene=dacA;product=D-alanyl-D-alanine carboxypeptidase fraction A;protein_id=YP_002347557.1;transl_table=11
NC_003143.1	RefSeq	gene	2923211	2924293	.	-	.	ID=gene2509;Name=rlpA;Dbxref=GeneID:1175431;gbkey=Gene;gene=rlpA;locus_tag=YPO2602
NC_003143.1	RefSeq	CDS	2923211	2924293	.	-	0	ID=cds2401;Name=YP_002347558.1;Parent=gene2509;Dbxref=InterPro:IPR005132,InterPro:IPR007730,InterPro:IPR009009,InterPro:IPR012997,UniProtKB%2FTrEMBL:Q0WDT0,Genbank:YP_002347558.1,GeneID:1175431;gbkey=CDS;gene=rlpA;product=rare lipoprotein A;protein_id=YP_002347558.1;transl_table=11
NC_003143.1	RefSeq	region	2924240	2924272	.	-	.	ID=id1893;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site.;Dbxref=GeneID:1175431;gbkey=misc_feature;gene=rlpA
NC_003143.1	RefSeq	gene	2924303	2925415	.	-	.	ID=gene2510;Name=rodA;Dbxref=GeneID:1175432;gbkey=Gene;gene=rodA;locus_tag=YPO2603
NC_003143.1	RefSeq	CDS	2924303	2925415	.	-	0	ID=cds2402;Name=YP_002347559.1;Parent=gene2510;Dbxref=InterPro:IPR001182,InterPro:IPR011923,UniProtKB%2FTrEMBL:Q7CJV6,Genbank:YP_002347559.1,GeneID:1175432;gbkey=CDS;gene=rodA;product=cell wall shape-determining protein;protein_id=YP_002347559.1;transl_table=11
NC_003143.1	RefSeq	region	2924381	2924455	.	-	.	ID=id1894;Note=PS00428 Cell cycle proteins ftsW %2F rodA %2F spoVE signature.;Dbxref=GeneID:1175432;gbkey=misc_feature;gene=rodA
NC_003143.1	RefSeq	gene	2925600	2927495	.	-	.	ID=gene2511;Name=pbpA;Dbxref=GeneID:1175433;gbkey=Gene;gene=pbpA;locus_tag=YPO2604
NC_003143.1	RefSeq	CDS	2925600	2927495	.	-	0	ID=cds2403;Name=YP_002347560.1;Parent=gene2511;Dbxref=InterPro:IPR001460,InterPro:IPR005311,InterPro:IPR012338,UniProtKB%2FTrEMBL:Q7CJV5,Genbank:YP_002347560.1,GeneID:1175433;gbkey=CDS;gene=pbpA;product=penicillin-binding protein 2;protein_id=YP_002347560.1;transl_table=11
NC_003143.1	RefSeq	region	2927367	2927432	.	-	.	ID=id1895;Note=1 probable transmembrane helix predicted;Dbxref=GeneID:1175433;gbkey=misc_feature;gene=pbpA
NC_003143.1	RefSeq	gene	2927577	2928047	.	-	.	ID=gene2512;Name=YPO2605;Dbxref=GeneID:1175434;gbkey=Gene;locus_tag=YPO2605
NC_003143.1	RefSeq	CDS	2927577	2928047	.	-	0	ID=cds2404;Name=YP_002347561.1;Parent=gene2512;Note=SPOUT methyltransferase family protein%3B crystal structure shows homodimer%3B in Escherichia coli this protein methylates pseudouridine at position 1915 of the 23S ribosomal RNA;Dbxref=InterPro:IPR003742,UniProtKB%2FTrEMBL:Q0WDS7,Genbank:YP_002347561.1,GeneID:1175434;gbkey=CDS;product=rRNA large subunit methyltransferase;protein_id=YP_002347561.1;transl_table=11
NC_003143.1	RefSeq	gene	2928051	2928368	.	-	.	ID=gene2513;Name=YPO2606;Dbxref=GeneID:1175435;gbkey=Gene;locus_tag=YPO2606
NC_003143.1	RefSeq	CDS	2928051	2928368	.	-	0	ID=cds2405;Name=YP_002347562.1;Parent=gene2513;Dbxref=InterPro:IPR004394,UniProtKB%2FTrEMBL:Q7CJV4,Genbank:YP_002347562.1,GeneID:1175435;gbkey=CDS;product=hypothetical protein;protein_id=YP_002347562.1;transl_table=11
NC_003143.1	RefSeq	region	2928276	2928299	.	-	.	ID=id1896;Note=PS00017 ATP%2FGTP-binding site motif A %28P-loop%29.;Dbxref=GeneID:1175435;gbkey=misc_feature
NC_003143.1	RefSeq	gene	2928592	2929254	.	-	.	ID=gene2514;Name=nadD;Dbxref=GeneID:1175436;gbkey=Gene;gene=nadD;locus_tag=YPO2607
NC_003143.1	RefSeq	CDS	2928592	2929254	.	-	0	ID=cds2406;Name=YP_002347563.1;Parent=gene2514;Note=transfers an adenyl group from ATP to NaMN to form nicotinic acid adenine dinucleotide %28NaAD%29 which is then converted to the ubiquitous compound NAD by NAD synthetase%3B essential enzyme in bacteria;Dbxref=InterPro:IPR004820,InterPro:IPR004821,InterPro:IPR005248,UniProtKB%2FTrEMBL:Q0WDS5,Genbank:YP_002347563.1,GeneID:1175436;gbkey=CDS;gene=nadD;product=nicotinic acid mononucleotide adenylyltransferase;protein_id=YP_002347563.1;transl_table=11
NC_003143.1	RefSeq	gene	2929244	2930278	.	-	.	ID=gene2515;Name=holA;Dbxref=GeneID:1175437;gbkey=Gene;gene=holA;locus_tag=YPO2608
NC_003143.1	RefSeq	CDS	2929244	2930278	.	-	0	ID=cds2407;Name=YP_002347564.1;Parent=gene2515;Note=required for the assembly and function of the DNAX complex which is required for the assembly of the beta subunit onto primed DNA;Dbxref=InterPro:IPR005790,InterPro:IPR008921,InterPro:IPR010372,UniProtKB%2FTrEMBL:Q7CJV3,Genbank:YP_002347564.1,GeneID:1175437;gbkey=CDS;gene=holA;product=DNA polymerase III subunit delta;protein_id=YP_002347564.1;transl_table=11
NC_003143.1	RefSeq	gene	2930275	2930898	.	-	.	ID=gene2516;Name=rlpB;Dbxref=GeneID:1175438;gbkey=Gene;gene=rlpB;locus_tag=YPO2609
NC_003143.1	RefSeq	CDS	2930275	2930898	.	-	0	ID=cds2408;Name=YP_002347565.1;Parent=gene2516;Note=rare lipoprotein B%3B involved in the assembly of LPS in the outer membrane;Dbxref=InterPro:IPR007485,UniProtKB%2FTrEMBL:Q7CJV2,Genbank:YP_002347565.1,GeneID:1175438;gbkey=CDS;gene=rlpB;product=LPS-assembly lipoprotein RlpB;protein_id=YP_002347565.1;transl_table=11
NC_003143.1	RefSeq	region	2930839	2930871	.	-	.	ID=id1897;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site.;Dbxref=GeneID:1175438;gbkey=misc_feature;gene=rlpB
NC_003143.1	RefSeq	gene	2930913	2933495	.	-	.	ID=gene2517;Name=leuS;Dbxref=GeneID:1175439;gbkey=Gene;gene=leuS;locus_tag=YPO2610
NC_003143.1	RefSeq	CDS	2930913	2933495	.	-	0	ID=cds2409;Name=YP_002347566.1;Parent=gene2517;Note=leucine--tRNA ligase%3B LeuRS%3B class-I aminoacyl-tRNA synthetase%3B charges leucine by linking carboxyl group to alpha-phosphate of ATP and then transfers aminoacyl-adenylate to its tRNA%3B due to the large number of codons that tRNA%28Leu%29 recognizes%2C the leucyl-tRNA synthetase does not recognize the anticodon loop of the tRNA%2C but instead recognition is dependent on a conserved discriminator base A37 and a long arm%3B an editing domain hydrolyzes misformed products%3B in Methanothermobacter thermautotrophicus this enzyme associates with prolyl-tRNA synthetase;Dbxref=InterPro:IPR001412,InterPro:IPR002300,InterPro:IPR002302,InterPro:IPR009080,InterPro:IPR013155,UniProtKB%2FTrEMBL:Q0WDS2,Genbank:YP_002347566.1,GeneID:1175439;gbkey=CDS;gene=leuS;product=leucyl-tRNA synthetase;protein_id=YP_002347566.1;transl_table=11
NC_003143.1	RefSeq	region	2933337	2933372	.	-	.	ID=id1898;Note=PS00178 Aminoacyl-transfer RNA synthetases class-I signature.;Dbxref=GeneID:1175439;gbkey=misc_feature;gene=leuS
NC_003143.1	RefSeq	gene	2933756	2934238	.	+	.	ID=gene2518;Name=YPO2611;Dbxref=GeneID:1175440;gbkey=Gene;locus_tag=YPO2611
NC_003143.1	RefSeq	CDS	2933756	2934238	.	+	0	ID=cds2410;Name=YP_002347567.1;Parent=gene2518;Dbxref=InterPro:IPR009912,UniProtKB%2FTrEMBL:Q0WDS1,Genbank:YP_002347567.1,GeneID:1175440;gbkey=CDS;product=hypothetical protein;protein_id=YP_002347567.1;transl_table=11
NC_003143.1	RefSeq	gene	2934372	2935100	.	-	.	ID=gene2519;Name=gltL;Dbxref=GeneID:1175441;gbkey=Gene;gene=gltL;locus_tag=YPO2612
NC_003143.1	RefSeq	CDS	2934372	2935100	.	-	0	ID=cds2411;Name=YP_002347568.1;Parent=gene2519;Dbxref=InterPro:IPR003439,InterPro:IPR003593,UniProtKB%2FTrEMBL:Q7CJV1,Genbank:YP_002347568.1,GeneID:1175441;gbkey=CDS;gene=gltL;product=glutamate%2Faspartate transport ATP-binding protein;protein_id=YP_002347568.1;transl_table=11
NC_003143.1	RefSeq	region	2934645	2934689	.	-	.	ID=id1899;Note=PS00211 ABC transporters family signature.;Dbxref=GeneID:1175441;gbkey=misc_feature;gene=gltL
NC_003143.1	RefSeq	region	2934975	2934998	.	-	.	ID=id1900;Note=PS00017 ATP%2FGTP-binding site motif A %28P-loop%29.;Dbxref=GeneID:1175441;gbkey=misc_feature;gene=gltL
NC_003143.1	RefSeq	gene	2935097	2935771	.	-	.	ID=gene2520;Name=gltK;Dbxref=GeneID:1175442;gbkey=Gene;gene=gltK;locus_tag=YPO2613
NC_003143.1	RefSeq	CDS	2935097	2935771	.	-	0	ID=cds2412;Name=YP_002347569.1;Parent=gene2520;Dbxref=InterPro:IPR000515,InterPro:IPR010065,UniProtKB%2FTrEMBL:Q7CJV0,Genbank:YP_002347569.1,GeneID:1175442;gbkey=CDS;gene=gltK;product=glutamate%2Faspartate transport system permease;protein_id=YP_002347569.1;transl_table=11
NC_003143.1	RefSeq	gene	2935771	2936511	.	-	.	ID=gene2521;Name=gltJ;Dbxref=GeneID:1175443;gbkey=Gene;gene=gltJ;locus_tag=YPO2614
NC_003143.1	RefSeq	CDS	2935771	2936511	.	-	0	ID=cds2413;Name=YP_002347570.1;Parent=gene2521;Dbxref=InterPro:IPR000515,InterPro:IPR010065,UniProtKB%2FTrEMBL:Q0WDR8,Genbank:YP_002347570.1,GeneID:1175443;gbkey=CDS;gene=gltJ;product=glutamate%2Faspartate transport system permease;protein_id=YP_002347570.1;transl_table=11
NC_003143.1	RefSeq	gene	2936685	2937602	.	-	.	ID=gene2522;Name=glnH;Dbxref=GeneID:1175444;gbkey=Gene;gene=glnH;locus_tag=YPO2615
NC_003143.1	RefSeq	CDS	2936685	2937602	.	-	0	ID=cds2414;Name=YP_002347571.1;Parent=gene2522;Dbxref=InterPro:IPR001638,UniProtKB%2FTrEMBL:Q7CJU9,Genbank:YP_002347571.1,GeneID:1175444;gbkey=CDS;gene=glnH;product=glutamate and aspartate transporter subunit;protein_id=YP_002347571.1;transl_table=11
NC_003143.1	RefSeq	gene	2938367	2939914	.	-	.	ID=gene2523;Name=lnt;Dbxref=GeneID:1175445;gbkey=Gene;gene=lnt;locus_tag=YPO2616
NC_003143.1	RefSeq	CDS	2938367	2939914	.	-	0	ID=cds2415;Name=YP_002347572.1;Parent=gene2523;Note=Transfers the fatty acyl group on membrane lipoproteins;Dbxref=InterPro:IPR003010,InterPro:IPR004563,UniProtKB%2FTrEMBL:Q0WDR6,Genbank:YP_002347572.1,GeneID:1175445;gbkey=CDS;gene=lnt;product=apolipoprotein N-acyltransferase;protein_id=YP_002347572.1;transl_table=11
NC_003143.1	RefSeq	gene	2939922	2940800	.	-	.	ID=gene2524;Name=ybeX;Dbxref=GeneID:1175446;gbkey=Gene;gene=ybeX;locus_tag=YPO2617
NC_003143.1	RefSeq	CDS	2939922	2940800	.	-	0	ID=cds2416;Name=YP_002347573.1;Parent=gene2524;Dbxref=InterPro:IPR000644,InterPro:IPR005170,UniProtKB%2FTrEMBL:Q7CJU8,Genbank:YP_002347573.1,GeneID:1175446;gbkey=CDS;gene=ybeX;product=hypothetical protein;protein_id=YP_002347573.1;transl_table=11
NC_003143.1	RefSeq	gene	2940918	2941391	.	-	.	ID=gene2525;Name=YPO2618;Dbxref=GeneID:1175447;gbkey=Gene;locus_tag=YPO2618
NC_003143.1	RefSeq	CDS	2940918	2941391	.	-	0	ID=cds2417;Name=YP_002347574.1;Parent=gene2525;Dbxref=InterPro:IPR002036,UniProtKB%2FTrEMBL:Q0WDR4,Genbank:YP_002347574.1,GeneID:1175447;gbkey=CDS;product=metalloprotease;protein_id=YP_002347574.1;transl_table=11
NC_003143.1	RefSeq	region	2941020	2941052	.	-	.	ID=id1901;Note=PS01306 Uncharacterized protein family UPF0054 signature.;Dbxref=GeneID:1175447;gbkey=misc_feature
NC_003143.1	RefSeq	gene	2941388	2942500	.	-	.	ID=gene2526;Name=YPO2619;Dbxref=GeneID:1175448;gbkey=Gene;locus_tag=YPO2619
NC_003143.1	RefSeq	CDS	2941388	2942500	.	-	0	ID=cds2418;Name=YP_002347575.1;Parent=gene2526;Dbxref=InterPro:IPR003714,UniProtKB%2FTrEMBL:Q7CJU7,Genbank:YP_002347575.1,GeneID:1175448;gbkey=CDS;product=hypothetical protein;protein_id=YP_002347575.1;transl_table=11
NC_003143.1	RefSeq	region	2941997	2942020	.	-	.	ID=id1902;Note=PS00017 ATP%2FGTP-binding site motif A %28P-loop%29.;Dbxref=GeneID:1175448;gbkey=misc_feature
NC_003143.1	RefSeq	gene	2942788	2944212	.	-	.	ID=gene2527;Name=miaB;Dbxref=GeneID:1175449;gbkey=Gene;gene=miaB;locus_tag=YPO2620
NC_003143.1	RefSeq	CDS	2942788	2944212	.	-	0	ID=cds2419;Name=YP_002347576.1;Parent=gene2527;Note=catalyzes the formation of 2-methylthio-N6-%28dimethylallyl%29adenosine %28ms%282%29i%286%29A%29 at position 37 in tRNAs that read codons beginning with uridine from N6-%28dimethylallyl%29adenosine %28i%286%29A%29;Dbxref=InterPro:IPR002792,InterPro:IPR005839,InterPro:IPR006463,InterPro:IPR006638,InterPro:IPR007197,InterPro:IPR013848,UniProtKB%2FTrEMBL:Q0WDR2,Genbank:YP_002347576.1,GeneID:1175449;gbkey=CDS;gene=miaB;product=%28dimethylallyl%29adenosine tRNA methylthiotransferase;protein_id=YP_002347576.1;transl_table=11
NC_003143.1	RefSeq	region	2943700	2943762	.	-	.	ID=id1903;Note=PS01278 Uncharacterized protein family UPF0004 signature.;Dbxref=GeneID:1175449;gbkey=misc_feature;gene=miaB
NC_003143.1	RefSeq	gene	2944454	2945635	.	+	.	ID=gene2528;Name=ubiF;Dbxref=GeneID:1175450;gbkey=Gene;gene=ubiF;locus_tag=YPO2621
NC_003143.1	RefSeq	CDS	2944454	2945635	.	+	0	ID=cds2420;Name=YP_002347577.1;Parent=gene2528;Note=catalyzes the formation of 2-octaprenyl-3-methyl-5-hydroxy-6-methoxy-1%2C4-benzoquinol from 2-octaprenyl-3-methyl-6-methoxy-1%2C4-benzoquinol%3B functions in the biosynthesis of ubiquinone or coenzyme Q;Dbxref=InterPro:IPR003042,InterPro:IPR006076,InterPro:IPR010971,UniProtKB%2FTrEMBL:Q7CJU6,Genbank:YP_002347577.1,GeneID:1175450;gbkey=CDS;gene=ubiF;product=2-octaprenyl-3-methyl-6-methoxy-1%2C4-benzoquinol hydroxylase;protein_id=YP_002347577.1;transl_table=11
NC_003143.1	RefSeq	gene	2946029	2946103	.	-	.	ID=gene2529;Name=YPt_32;Dbxref=GeneID:1175451;gbkey=Gene;locus_tag=YPt_32
NC_003143.1	RefSeq	tRNA	2946029	2946103	.	-	.	ID=rna46;Parent=gene2529;Note=tRNA Gln anticodon CTG%2C Cove score 74.52;Dbxref=GeneID:1175451;gbkey=tRNA;product=tRNA-Gln
NC_003143.1	RefSeq	exon	2946029	2946103	.	-	.	ID=id1904;Parent=rna46;Note=tRNA Gln anticodon CTG%2C Cove score 74.52;Dbxref=GeneID:1175451;gbkey=tRNA;product=tRNA-Gln
NC_003143.1	RefSeq	gene	2946109	2946185	.	-	.	ID=gene2530;Name=YPt_33;Dbxref=GeneID:1175452;gbkey=Gene;locus_tag=YPt_33
NC_003143.1	RefSeq	tRNA	2946109	2946185	.	-	.	ID=rna47;Parent=gene2530;Note=tRNA Met anticodon CAT%2C Cove score 94.35;Dbxref=GeneID:1175452;gbkey=tRNA;product=tRNA-Met
NC_003143.1	RefSeq	exon	2946109	2946185	.	-	.	ID=id1905;Parent=rna47;Note=tRNA Met anticodon CAT%2C Cove score 94.35;Dbxref=GeneID:1175452;gbkey=tRNA;product=tRNA-Met
NC_003143.1	RefSeq	gene	2946218	2946292	.	-	.	ID=gene2531;Name=YPt_34;Dbxref=GeneID:1175453;gbkey=Gene;locus_tag=YPt_34
NC_003143.1	RefSeq	tRNA	2946218	2946292	.	-	.	ID=rna48;Parent=gene2531;Note=tRNA Gln anticodon TTG%2C Cove score 75.01;Dbxref=GeneID:1175453;gbkey=tRNA;product=tRNA-Gln
NC_003143.1	RefSeq	exon	2946218	2946292	.	-	.	ID=id1906;Parent=rna48;Note=tRNA Gln anticodon TTG%2C Cove score 75.01;Dbxref=GeneID:1175453;gbkey=tRNA;product=tRNA-Gln
NC_003143.1	RefSeq	gene	2946322	2946406	.	-	.	ID=gene2532;Name=YPt_35;Dbxref=GeneID:1175454;gbkey=Gene;locus_tag=YPt_35
NC_003143.1	RefSeq	tRNA	2946322	2946406	.	-	.	ID=rna49;Parent=gene2532;Note=tRNA Leu anticodon TAG%2C Cove score 76.99;Dbxref=GeneID:1175454;gbkey=tRNA;product=tRNA-Leu
NC_003143.1	RefSeq	exon	2946322	2946406	.	-	.	ID=id1907;Parent=rna49;Note=tRNA Leu anticodon TAG%2C Cove score 76.99;Dbxref=GeneID:1175454;gbkey=tRNA;product=tRNA-Leu
NC_003143.1	RefSeq	gene	2946414	2946490	.	-	.	ID=gene2533;Name=YPt_36;Dbxref=GeneID:1175455;gbkey=Gene;locus_tag=YPt_36
NC_003143.1	RefSeq	tRNA	2946414	2946490	.	-	.	ID=rna50;Parent=gene2533;Note=tRNA Met anticodon CAT%2C Cove score 94.35;Dbxref=GeneID:1175455;gbkey=tRNA;product=tRNA-Met
NC_003143.1	RefSeq	exon	2946414	2946490	.	-	.	ID=id1908;Parent=rna50;Note=tRNA Met anticodon CAT%2C Cove score 94.35;Dbxref=GeneID:1175455;gbkey=tRNA;product=tRNA-Met
NC_003143.1	RefSeq	gene	2946762	2946899	.	+	.	ID=gene2534;Name=YPO2622;Dbxref=GeneID:1175456;gbkey=Gene;locus_tag=YPO2622
NC_003143.1	RefSeq	CDS	2946762	2946899	.	+	0	ID=cds2421;Name=YP_002347578.1;Parent=gene2534;Note=no significant database hits;Dbxref=UniProtKB%2FTrEMBL:Q0WDR0,Genbank:YP_002347578.1,GeneID:1175456;gbkey=CDS;product=hypothetical protein;protein_id=YP_002347578.1;transl_table=11
NC_003143.1	RefSeq	gene	2946948	2948612	.	-	.	ID=gene2535;Name=asnB;Dbxref=GeneID:1175457;gbkey=Gene;gene=asnB;locus_tag=YPO2623
NC_003143.1	RefSeq	CDS	2946948	2948612	.	-	0	ID=cds2422;Name=YP_002347579.1;Parent=gene2535;Note=functions in asparagine biosynthesis%3B converts glutamine%2C aspartate%2C ATP%2C and water to glutamate%2C asparagine%2C pyrophosphate and AMP;Dbxref=InterPro:IPR000583,InterPro:IPR001962,InterPro:IPR006426,UniProtKB%2FTrEMBL:Q7CJU5,Genbank:YP_002347579.1,GeneID:1175457;gbkey=CDS;gene=asnB;product=asparagine synthetase B;protein_id=YP_002347579.1;transl_table=11
NC_003143.1	RefSeq	region	2948595	2948612	.	-	.	ID=id1909;Note=PS00443 Glutamine amidotransferases class-II active site.;Dbxref=GeneID:1175457;gbkey=misc_feature;gene=asnB
NC_003143.1	RefSeq	gene	2948967	2949719	.	-	.	ID=gene2536;Name=nagD;Dbxref=GeneID:1175458;gbkey=Gene;gene=nagD;locus_tag=YPO2624
NC_003143.1	RefSeq	CDS	2948967	2949719	.	-	0	ID=cds2423;Name=YP_002347580.1;Parent=gene2536;Dbxref=InterPro:IPR005834,InterPro:IPR006357,UniProtKB%2FTrEMBL:Q7CJU4,Genbank:YP_002347580.1,GeneID:1175458;gbkey=CDS;gene=nagD;product=UMP phosphatase;protein_id=YP_002347580.1;transl_table=11
NC_003143.1	RefSeq	gene	2949792	2951021	.	-	.	ID=gene2537;Name=nagC;Dbxref=GeneID:1175459;gbkey=Gene;gene=nagC;gene_synonym=nagR;locus_tag=YPO2625
NC_003143.1	RefSeq	CDS	2949792	2951021	.	-	0	ID=cds2424;Name=YP_002347581.1;Parent=gene2537;Dbxref=InterPro:IPR000600,InterPro:IPR000835,InterPro:IPR011991,UniProtKB%2FTrEMBL:Q0WDQ7,Genbank:YP_002347581.1,GeneID:1175459;gbkey=CDS;gene=nagC;product=N-acetylglucosamine regulatory protein;protein_id=YP_002347581.1;transl_table=11
NC_003143.1	RefSeq	region	2950278	2950361	.	-	.	ID=id1910;Note=PS01125 ROK family signature.;Dbxref=GeneID:1175459;gbkey=misc_feature;gene=nagC
NC_003143.1	RefSeq	region	2950857	2950922	.	-	.	ID=id1911;Note=Predicted helix-turn-helix motif with score 989 %28%2B2.56 SD%29 at aa 34-55%2C sequence ISRIQIADLSQLAPASVTKITR;Dbxref=GeneID:1175459;gbkey=misc_feature;gene=nagC
NC_003143.1	RefSeq	gene	2951035	2952180	.	-	.	ID=gene2538;Name=nagA;Dbxref=GeneID:1175460;gbkey=Gene;gene=nagA;locus_tag=YPO2626
NC_003143.1	RefSeq	CDS	2951035	2952180	.	-	0	ID=cds2425;Name=YP_002347582.1;Parent=gene2538;Note=catalyzes the formation of glucosamine 6-phosphate from N-acetylglucosamine 6-phosphate;Dbxref=InterPro:IPR003764,InterPro:IPR006680,InterPro:IPR011059,InterPro:IPR011550,UniProtKB%2FTrEMBL:Q7CJU3,Genbank:YP_002347582.1,GeneID:1175460;gbkey=CDS;gene=nagA;product=N-acetylglucosamine-6-phosphate deacetylase;protein_id=YP_002347582.1;transl_table=11
NC_003143.1	RefSeq	gene	2952200	2953000	.	-	.	ID=gene2539;Name=nagB;Dbxref=GeneID:1175461;gbkey=Gene;gene=nagB;locus_tag=YPO2627
NC_003143.1	RefSeq	CDS	2952200	2953000	.	-	0	ID=cds2426;Name=YP_002347583.1;Parent=gene2539;Note=catalyzes the reversible formation of fructose 6-phosphate from glucosamine 6-phosphate;Dbxref=InterPro:IPR004547,InterPro:IPR006148,UniProtKB%2FTrEMBL:Q0WDQ5,Genbank:YP_002347583.1,GeneID:1175461;gbkey=CDS;gene=nagB;product=glucosamine-6-phosphate deaminase;protein_id=YP_002347583.1;transl_table=11
NC_003143.1	RefSeq	region	2952572	2952628	.	-	.	ID=id1912;Note=PS01161 Glucosamine%2Fgalactosamine-6-phosphate isomerases signature.;Dbxref=GeneID:1175461;gbkey=misc_feature;gene=nagB
NC_003143.1	RefSeq	gene	2953400	2955433	.	+	.	ID=gene2540;Name=nagE;Dbxref=GeneID:1175462;gbkey=Gene;gene=nagE;gene_synonym=pstN;locus_tag=YPO2628
NC_003143.1	RefSeq	CDS	2953400	2955433	.	+	0	ID=cds2427;Name=YP_002347584.1;Parent=gene2540;Dbxref=InterPro:IPR001127,InterPro:IPR001996,InterPro:IPR003352,InterPro:IPR010974,InterPro:IPR011055,InterPro:IPR011535,InterPro:IPR013013,UniProtKB%2FTrEMBL:Q7CJU2,Genbank:YP_002347584.1,GeneID:1175462;gbkey=CDS;gene=nagE;product=PTS system N-acetylglucosamine-specific transporter subunit IIABC;protein_id=YP_002347584.1;transl_table=11
NC_003143.1	RefSeq	region	2954702	2954755	.	+	.	ID=id1913;Note=PS01035 PTS EIIB domains cysteine phosphorylation site signature.;Dbxref=GeneID:1175462;gbkey=misc_feature;gene=nagE
NC_003143.1	RefSeq	region	2955170	2955208	.	+	.	ID=id1914;Note=PS00371 PTS EIIA domains phosphorylation site signature 1.;Dbxref=GeneID:1175462;gbkey=misc_feature;gene=nagE
NC_003143.1	RefSeq	repeat_region	2955553	2956264	.	+	.	ID=id1915;Note=Contains a %27G%27 at nucleotide position 315%7EIS200-like insertion sequence:IS1541;gbkey=repeat_region
NC_003143.1	RefSeq	gene	2955698	2956156	.	+	.	ID=gene2541;Name=tnp;Dbxref=GeneID:1175463;gbkey=Gene;gene=tnp;locus_tag=YPO2629
NC_003143.1	RefSeq	CDS	2955698	2956156	.	+	0	ID=cds2428;Name=YP_002347585.1;Parent=gene2541;Dbxref=InterPro:IPR002686,UniProtKB%2FTrEMBL:Q74YM6,Genbank:YP_002347585.1,GeneID:1175463;gbkey=CDS;gene=tnp;product=transposase for the IS1541 insertion element;protein_id=YP_002347585.1;transl_table=11
NC_003143.1	RefSeq	gene	2956358	2958025	.	+	.	ID=gene2542;Name=glnS;Dbxref=GeneID:1175464;gbkey=Gene;gene=glnS;locus_tag=YPO2630
NC_003143.1	RefSeq	CDS	2956358	2958025	.	+	0	ID=cds2429;Name=YP_002347586.1;Parent=gene2542;Note=catalyzes a two-step reaction%2C first charging a glutamine molecule by linking its carboxyl group to the alpha-phosphate of ATP%2C followed by transfer of the aminoacyl-adenylate to its tRNA;Dbxref=InterPro:IPR000924,InterPro:IPR001412,InterPro:IPR004514,InterPro:IPR011035,UniProtKB%2FTrEMBL:Q0WDQ2,Genbank:YP_002347586.1,GeneID:1175464;gbkey=CDS;gene=glnS;product=glutaminyl-tRNA synthetase;protein_id=YP_002347586.1;transl_table=11
NC_003143.1	RefSeq	region	2956457	2956492	.	+	.	ID=id1916;Note=PS00178 Aminoacyl-transfer RNA synthetases class-I signature.;Dbxref=GeneID:1175464;gbkey=misc_feature;gene=glnS
NC_003143.1	RefSeq	gene	2958731	2960152	.	+	.	ID=gene2543;Name=ybfM;Dbxref=GeneID:1175465;gbkey=Gene;gene=ybfM;locus_tag=YPO2631
NC_003143.1	RefSeq	CDS	2958731	2960152	.	+	0	ID=cds2430;Name=YP_002347587.1;Parent=gene2543;Dbxref=InterPro:IPR005318,UniProtKB%2FTrEMBL:Q7CJU1,Genbank:YP_002347587.1,GeneID:1175465;gbkey=CDS;gene=ybfM;product=hypothetical protein;protein_id=YP_002347587.1;transl_table=11
NC_003143.1	RefSeq	gene	2960480	2963141	.	+	.	ID=gene2544;Name=chb;Dbxref=GeneID:1175466;gbkey=Gene;gene=chb;locus_tag=YPO2632;pseudo=true
NC_003143.1	RefSeq	gene	2963585	2964031	.	-	.	ID=gene2545;Name=fur;Dbxref=GeneID:1175467;gbkey=Gene;gene=fur;locus_tag=YPO2634
NC_003143.1	RefSeq	CDS	2963585	2964031	.	-	0	ID=cds2431;Name=YP_002347588.1;Parent=gene2545;Note=negatively regulates a number of operons that encode enzymes involved in iron transport%3B activated by manganese%3B forms a homodimer;Dbxref=InterPro:IPR002481,UniProtKB%2FTrEMBL:Q0WDQ0,Genbank:YP_002347588.1,GeneID:1175467;gbkey=CDS;gene=fur;product=ferric uptake regulator;protein_id=YP_002347588.1;transl_table=11
NC_003143.1	RefSeq	gene	2964398	2964925	.	-	.	ID=gene2546;Name=fldA;Dbxref=GeneID:1175468;gbkey=Gene;gene=fldA;locus_tag=YPO2635
NC_003143.1	RefSeq	CDS	2964398	2964925	.	-	0	ID=cds2432;Name=YP_002347589.1;Parent=gene2546;Note=An electron-transfer protein%3B flavodoxin binds one FMN molecule%2C which serves as a redox-active prosthetic group;Dbxref=InterPro:IPR001094,InterPro:IPR001226,InterPro:IPR008254,InterPro:IPR010086,UniProtKB%2FTrEMBL:Q7CJU0,Genbank:YP_002347589.1,GeneID:1175468;gbkey=CDS;gene=fldA;product=flavodoxin FldA;protein_id=YP_002347589.1;transl_table=11
NC_003143.1	RefSeq	region	2964860	2964910	.	-	.	ID=id1917;Note=PS00201 Flavodoxin signature.;Dbxref=GeneID:1175468;gbkey=misc_feature;gene=fldA
NC_003143.1	RefSeq	gene	2965342	2965629	.	-	.	ID=gene2547;Name=YPO2637;Dbxref=GeneID:1175469;gbkey=Gene;locus_tag=YPO2637
NC_003143.1	RefSeq	CDS	2965342	2965629	.	-	0	ID=cds2433;Name=YP_002347590.1;Parent=gene2547;Dbxref=InterPro:IPR002145,InterPro:IPR010985,UniProtKB%2FTrEMBL:Q7CJT9,Genbank:YP_002347590.1,GeneID:1175469;gbkey=CDS;product=LexA regulated protein;protein_id=YP_002347590.1;transl_table=11
NC_003143.1	RefSeq	gene	2965961	2966728	.	-	.	ID=gene2548;Name=YPO2638;Dbxref=GeneID:1175470;gbkey=Gene;locus_tag=YPO2638
NC_003143.1	RefSeq	CDS	2965961	2966728	.	-	0	ID=cds2434;Name=YP_002347591.1;Parent=gene2548;Dbxref=InterPro:IPR000073,InterPro:IPR003089,UniProtKB%2FTrEMBL:Q7CJT8,Genbank:YP_002347591.1,GeneID:1175470;gbkey=CDS;product=hypothetical protein;protein_id=YP_002347591.1;transl_table=11
NC_003143.1	RefSeq	gene	2967439	2967690	.	+	.	ID=gene2549;Name=YPO2638a;Dbxref=GeneID:16744768;gbkey=Gene;locus_tag=YPO2638a
NC_003143.1	RefSeq	CDS	2967439	2967690	.	+	0	ID=cds2435;Name=YP_008479720.1;Parent=gene2549;Dbxref=Genbank:YP_008479720.1,GeneID:16744768;gbkey=CDS;product=hypothetical protein;protein_id=YP_008479720.1;transl_table=11
NC_003143.1	RefSeq	gene	2968121	2968384	.	-	.	ID=gene2550;Name=YPO2640;Note=trp1400A;Dbxref=GeneID:1175472;gbkey=Gene;locus_tag=YPO2640
NC_003143.1	RefSeq	CDS	2968121	2968384	.	-	0	ID=cds2436;Name=YP_002347593.1;Parent=gene2550;Dbxref=InterPro:IPR002514,InterPro:IPR009057,UniProtKB%2FTrEMBL:Q7CJT7,Genbank:YP_002347593.1,GeneID:1175472;gbkey=CDS;product=IS1400 transposase A;protein_id=YP_002347593.1;transl_table=11
NC_003143.1	RefSeq	region	2968259	2968324	.	-	.	ID=id1918;Note=Predicted helix-turn-helix motif with score 1129 %28%2B3.03 SD%29 at aa 21-42%2C sequence VSARELCRKHAISEASYYNWKA;Dbxref=GeneID:1175472;gbkey=misc_feature
NC_003143.1	RefSeq	repeat_region	2968865	2970818	.	-	.	ID=id1919;Note=insertion sequence:IS100;gbkey=repeat_region
NC_003143.1	RefSeq	repeat_region	2968865	2968892	.	+	.	ID=id1920;Note=IS100 inverted repeat;gbkey=repeat_region
NC_003143.1	RefSeq	gene	2968931	2969713	.	-	.	ID=gene2551;Name=YPO2642;Note=ypmt1.57c;Dbxref=GeneID:1175474;gbkey=Gene;locus_tag=YPO2642
NC_003143.1	RefSeq	CDS	2968931	2969713	.	-	0	ID=cds2437;Name=YP_002347595.1;Parent=gene2551;Dbxref=InterPro:IPR001270,InterPro:IPR002611,InterPro:IPR003593,UniProtKB%2FTrEMBL:Q7ARK4,Genbank:YP_002347595.1,GeneID:1175474;gbkey=CDS;product=transposase%2FIS protein;protein_id=YP_002347595.1;transl_table=11
NC_003143.1	RefSeq	region	2969363	2969386	.	-	.	ID=id1921;Note=PS00017 ATP%2FGTP-binding site motif A %28P-loop%29.;Dbxref=GeneID:1175474;gbkey=misc_feature
NC_003143.1	RefSeq	gene	2969710	2970732	.	-	.	ID=gene2552;Name=y1093;Dbxref=GeneID:1175475;gbkey=Gene;gene=y1093;gene_synonym=ypmt1;locus_tag=YPO2643
NC_003143.1	RefSeq	CDS	2969710	2970732	.	-	0	ID=cds2438;Name=YP_002347596.1;Parent=gene2552;Dbxref=InterPro:IPR001584,InterPro:IPR006120,InterPro:IPR009057,InterPro:IPR012287,InterPro:IPR012337,UniProtKB%2FTrEMBL:Q7ARN5,Genbank:YP_002347596.1,GeneID:1175475;gbkey=CDS;gene=y1093;product=transposase for insertion sequence IS100;protein_id=YP_002347596.1;transl_table=11
NC_003143.1	RefSeq	region	2970616	2970681	.	-	.	ID=id1922;Note=Predicted helix-turn-helix motif with score 2147 %28%2B6.50 SD%29 at aa 18-39%2C sequence MSSRAIARELGISRNTVKRYLQ;Dbxref=GeneID:1175475;gbkey=misc_feature;gene=y1093
NC_003143.1	RefSeq	repeat_region	2970791	2970818	.	-	.	ID=id1923;Note=IS100 inverted repeat;gbkey=repeat_region
NC_003143.1	RefSeq	gene	2970819	2971556	.	+	.	ID=gene2553;Name=YPO2644;Dbxref=GeneID:1175476;gbkey=Gene;locus_tag=YPO2644;pseudo=true
NC_003143.1	RefSeq	region	2970819	2971556	.	+	.	ID=id1924;Note=This CDS is disrupted by the insertion of IS100 element. Similar to C-terminal regions of Schizosaccharomyces pombe hypothetical protein in chromosome I SPAC19G12.03 TR:O13842 %28EMBL:Z97209%29 %28320 aa%29 fasta scores: E%28%29: 2.3e-25%2C 44.8%25 id in 250 aa%2C and Synechocystis sp hypothetical protein SLL1306 TR:P73597 %28EMBL:D90907%29 %28335 aa%29 fasta scores: E%28%29: 1.7e-13%2C 30.7%25 id in 231 aa.;Dbxref=GeneID:1175476;gbkey=misc_feature;pseudo=true
NC_003143.1	RefSeq	gene	2971786	2972790	.	-	.	ID=gene2554;Name=proX;Dbxref=GeneID:1175477;gbkey=Gene;gene=proX;locus_tag=YPO2645
NC_003143.1	RefSeq	CDS	2971786	2972790	.	-	0	ID=cds2439;Name=YP_002347597.1;Parent=gene2554;Note=with ProVW%2C part of the high-affinity transport system for the osmoprotectant glycine betaine;Dbxref=InterPro:IPR007210,UniProtKB%2FTrEMBL:Q7CJT4,Genbank:YP_002347597.1,GeneID:1175477;gbkey=CDS;gene=proX;product=glycine betaine transporter substrate-binding protein;protein_id=YP_002347597.1;transl_table=11
NC_003143.1	RefSeq	gene	2972838	2974004	.	-	.	ID=gene2555;Name=proW;Dbxref=GeneID:1175478;gbkey=Gene;gene=proW;locus_tag=YPO2646
NC_003143.1	RefSeq	CDS	2972838	2974004	.	-	0	ID=cds2440;Name=YP_002347598.1;Parent=gene2555;Note=with ProVX is involved in the high-affinity uptake of glycine betaine;Dbxref=InterPro:IPR000515,UniProtKB%2FTrEMBL:Q7CJT3,Genbank:YP_002347598.1,GeneID:1175478;gbkey=CDS;gene=proW;product=glycine betaine transporter membrane protein;protein_id=YP_002347598.1;transl_table=11
NC_003143.1	RefSeq	region	2973135	2973221	.	-	.	ID=id1925;Note=PS00402 Binding-protein-dependent transport systems inner membrane comp. sign.;Dbxref=GeneID:1175478;gbkey=misc_feature;gene=proW
NC_003143.1	RefSeq	gene	2973997	2975196	.	-	.	ID=gene2556;Name=proV;Dbxref=GeneID:1175479;gbkey=Gene;gene=proV;locus_tag=YPO2647
NC_003143.1	RefSeq	CDS	2973997	2975196	.	-	0	ID=cds2441;Name=YP_002347599.1;Parent=gene2556;Dbxref=InterPro:IPR000644,InterPro:IPR003439,InterPro:IPR003593,InterPro:IPR005892,UniProtKB%2FTrEMBL:Q0WDN9,Genbank:YP_002347599.1,GeneID:1175479;gbkey=CDS;gene=proV;product=glycine betaine%2FL-proline transport ATP-binding protein;protein_id=YP_002347599.1;transl_table=11
NC_003143.1	RefSeq	region	2974660	2974704	.	-	.	ID=id1926;Note=PS00211 ABC transporters family signature.;Dbxref=GeneID:1175479;gbkey=misc_feature;gene=proV
NC_003143.1	RefSeq	region	2974993	2975016	.	-	.	ID=id1927;Note=PS00017 ATP%2FGTP-binding site motif A %28P-loop%29.;Dbxref=GeneID:1175479;gbkey=misc_feature;gene=proV
NC_003143.1	RefSeq	gene	2975872	2976843	.	-	.	ID=gene2557;Name=nrdF;Dbxref=GeneID:1175480;gbkey=Gene;gene=nrdF;locus_tag=YPO2648
NC_003143.1	RefSeq	CDS	2975872	2976843	.	-	0	ID=cds2442;Name=YP_002347600.1;Parent=gene2557;Note=B2 or R2 protein%3B type 1b enzyme%3B catalyzes the rate-limiting step in dNTP synthesis%3B converts nucleotides to deoxynucleotides%3B forms a homodimer and then a multimeric complex with NrdE;Dbxref=InterPro:IPR000358,InterPro:IPR009078,InterPro:IPR012348,UniProtKB%2FTrEMBL:Q7CJT2,Genbank:YP_002347600.1,GeneID:1175480;gbkey=CDS;gene=nrdF;product=ribonucleotide-diphosphate reductase subunit beta;protein_id=YP_002347600.1;transl_table=11
NC_003143.1	RefSeq	region	2976493	2976543	.	-	.	ID=id1928;Note=PS00368 Ribonucleotide reductase small subunit signature.;Dbxref=GeneID:1175480;gbkey=misc_feature;gene=nrdF
NC_003143.1	RefSeq	gene	2976950	2979031	.	-	.	ID=gene2558;Name=nrdE;Dbxref=GeneID:1175481;gbkey=Gene;gene=nrdE;locus_tag=YPO2649
NC_003143.1	RefSeq	CDS	2976950	2979031	.	-	0	ID=cds2443;Name=YP_002347601.1;Parent=gene2558;Note=Catalyzes the rate-limiting step in dNTP synthesis;Dbxref=InterPro:IPR000788,InterPro:IPR008926,InterPro:IPR013346,InterPro:IPR013509,InterPro:IPR013554,UniProtKB%2FTrEMBL:Q0WDN7,Genbank:YP_002347601.1,GeneID:1175481;gbkey=CDS;gene=nrdE;product=ribonucleotide-diphosphate reductase subunit alpha;protein_id=YP_002347601.1;transl_table=11
NC_003143.1	RefSeq	region	2977037	2977102	.	-	.	ID=id1929;Note=Predicted helix-turn-helix motif with score 1032 %28%2B2.70 SD%29 at aa 644-665%2C sequence LFFRDTATTRDINKAQIYAWKK;Dbxref=GeneID:1175481;gbkey=misc_feature;gene=nrdE
NC_003143.1	RefSeq	region	2977331	2977399	.	-	.	ID=id1930;Note=PS00089 Ribonucleotide reductase large subunit signature.;Dbxref=GeneID:1175481;gbkey=misc_feature;gene=nrdE
NC_003143.1	RefSeq	gene	2979082	2979486	.	-	.	ID=gene2559;Name=nrdI;Dbxref=GeneID:1175482;gbkey=Gene;gene=nrdI;locus_tag=YPO2650
NC_003143.1	RefSeq	CDS	2979082	2979486	.	-	0	ID=cds2444;Name=YP_002347602.1;Parent=gene2559;Note=in Salmonella NrdI has a stimulatory effect on the ribonucleotide reductase activity of NrdH with NrdEF;Dbxref=InterPro:IPR004465,UniProtKB%2FTrEMBL:Q0WDN6,Genbank:YP_002347602.1,GeneID:1175482;gbkey=CDS;gene=nrdI;product=ribonucleotide reductase stimulatory protein;protein_id=YP_002347602.1;transl_table=11
NC_003143.1	RefSeq	gene	2979500	2979736	.	-	.	ID=gene2560;Name=nrdH;Dbxref=GeneID:1175483;gbkey=Gene;gene=nrdH;locus_tag=YPO2651
NC_003143.1	RefSeq	CDS	2979500	2979736	.	-	0	ID=cds2445;Name=YP_002347603.1;Parent=gene2560;Dbxref=InterPro:IPR002109,InterPro:IPR011909,InterPro:IPR012335,InterPro:IPR012336,UniProtKB%2FTrEMBL:Q7CJT1,Genbank:YP_002347603.1,GeneID:1175483;gbkey=CDS;gene=nrdH;product=glutaredoxin;protein_id=YP_002347603.1;transl_table=11
NC_003143.1	RefSeq	gene	2980257	2980622	.	+	.	ID=gene2561;Name=asr;Dbxref=GeneID:1175484;gbkey=Gene;gene=asr;locus_tag=YPO2652
NC_003143.1	RefSeq	CDS	2980257	2980622	.	+	0	ID=cds2446;Name=YP_002347604.1;Parent=gene2561;Note=required for growth and survival under moderately acid conditions;Dbxref=InterPro:IPR009435,UniProtKB%2FTrEMBL:Q0WDN4,Genbank:YP_002347604.1,GeneID:1175484;gbkey=CDS;gene=asr;product=acid shock protein;protein_id=YP_002347604.1;transl_table=11
NC_003143.1	RefSeq	repeat_region	2980429	2980576	.	+	.	ID=id1931;Note=Degenerate repeat region containing 2.5x CAGAACAGAAAGCACAAGCAGCGAAAAAACACGAGAAAAAAGCATCAGTTCAAAAAAC A C.;Dbxref=GeneID:1175484;gbkey=repeat_region;gene=asr
NC_003143.1	RefSeq	gene	2981100	2981435	.	+	.	ID=gene2562;Name=YPO2653;Dbxref=GeneID:1175485;gbkey=Gene;locus_tag=YPO2653
NC_003143.1	RefSeq	CDS	2981100	2981435	.	+	0	ID=cds2447;Name=YP_002347605.1;Parent=gene2562;Dbxref=UniProtKB%2FTrEMBL:Q7CJT0,Genbank:YP_002347605.1,GeneID:1175485;gbkey=CDS;product=hypothetical protein;protein_id=YP_002347605.1;transl_table=11
NC_003143.1	RefSeq	gene	2981533	2981982	.	-	.	ID=gene2563;Name=yicN;Dbxref=GeneID:1175486;gbkey=Gene;gene=yicN;locus_tag=YPO2654
NC_003143.1	RefSeq	CDS	2981533	2981982	.	-	0	ID=cds2448;Name=YP_002347606.1;Parent=gene2563;Dbxref=InterPro:IPR009587,UniProtKB%2FTrEMBL:Q7CJS9,Genbank:YP_002347606.1,GeneID:1175486;gbkey=CDS;gene=yicN;product=hypothetical protein;protein_id=YP_002347606.1;transl_table=11
NC_003143.1	RefSeq	region	2981920	2981970	.	-	.	ID=id1932;Note=1 probable transmembrane helix predicted;Dbxref=GeneID:1175486;gbkey=misc_feature;gene=yicN
NC_003143.1	RefSeq	repeat_region	2982277	2983591	.	+	.	ID=id1933;Note=insertion sequence:IS285;gbkey=repeat_region
NC_003143.1	RefSeq	repeat_region	2982277	2982305	.	+	.	ID=id1934;Note=IS285 inverted repeat;gbkey=repeat_region
NC_003143.1	RefSeq	gene	2982348	2983556	.	+	.	ID=gene2564;Name=y1062;Dbxref=GeneID:1175487;gbkey=Gene;gene=y1062;gene_synonym=ypmt1.80C;locus_tag=YPO2656
NC_003143.1	RefSeq	CDS	2982348	2983556	.	+	0	ID=cds2449;Name=YP_002347607.1;Parent=gene2564;Dbxref=InterPro:IPR001207,UniProtKB%2FTrEMBL:Q7ARB0,Genbank:YP_002347607.1,GeneID:1175487;gbkey=CDS;gene=y1062;product=transposase for the IS285 insertion element;protein_id=YP_002347607.1;transl_table=11
NC_003143.1	RefSeq	region	2983041	2983115	.	+	.	ID=id1935;Note=PS01007 Transposases%2C Mutator family%2C signature.;Dbxref=GeneID:1175487;gbkey=misc_feature;gene=y1062
NC_003143.1	RefSeq	repeat_region	2983563	2983591	.	-	.	ID=id1936;Note=IS285 inverted repeat;gbkey=repeat_region
NC_003143.1	RefSeq	gene	2983593	2983802	.	-	.	ID=gene2565;Name=YPO2657;Dbxref=GeneID:1175488;gbkey=Gene;locus_tag=YPO2657;pseudo=true
NC_003143.1	RefSeq	region	2983593	2983802	.	-	.	ID=id1937;Note=Similar to Escherichia coli plasmid %28ColE1%29 mobilization protein MbeD SW:MBED_ECOLI %28P13660%29 %2877 aa%29 fasta scores: E%28%29: 0.31%2C 28.4%25 id in 67 aa%2C and to Escherichia coli plasmid %28pLG13%29 mobilization protein MobD TR:AAG18130 %28EMBL:AF251289%29 %2877 aa%29 fasta scores: E%28%29: 0.18%2C 28.4%25 id in 67 aa. This CDS appears to be disrupted by the insertion of the downstream IS285 element. The insertion occurred near the C-terminus. It is not clear whether this insertion affects the function of the protein.;Dbxref=GeneID:1175488;gbkey=misc_feature;pseudo=true
NC_003143.1	RefSeq	gene	2984138	2984599	.	+	.	ID=gene2566;Name=YPO2657a;Dbxref=GeneID:16744769;gbkey=Gene;locus_tag=YPO2657a
NC_003143.1	RefSeq	ncRNA	2984138	2984599	.	+	.	ID=rna51;Parent=gene2566;Dbxref=GeneID:16744769;gbkey=ncRNA;ncrna_class=other;product=ncRNA-cspA thermoregulator
NC_003143.1	RefSeq	exon	2984138	2984599	.	+	.	ID=id1938;Parent=rna51;Dbxref=GeneID:16744769;gbkey=ncRNA;ncrna_class=other;product=ncRNA-cspA thermoregulator
NC_003143.1	RefSeq	gene	2984316	2984528	.	+	.	ID=gene2567;Name=cspB;Dbxref=GeneID:1175489;gbkey=Gene;gene=cspB;locus_tag=YPO2659
NC_003143.1	RefSeq	CDS	2984316	2984528	.	+	0	ID=cds2450;Name=YP_002347608.1;Parent=gene2567;Dbxref=InterPro:IPR002059,InterPro:IPR008994,InterPro:IPR011129,InterPro:IPR012156,InterPro:IPR012340,UniProtKB%2FTrEMBL:Q0WDN0,Genbank:YP_002347608.1,GeneID:1175489;gbkey=CDS;gene=cspB;product=cold shock protein;protein_id=YP_002347608.1;transl_table=11
NC_003143.1	RefSeq	region	2984367	2984426	.	+	.	ID=id1939;Note=PS00352 %27Cold-shock%27 DNA-binding domain signature.;Dbxref=GeneID:1175489;gbkey=misc_feature;gene=cspB
NC_003143.1	RefSeq	repeat_region	2984638	2984791	.	+	.	ID=id1940;Note=22 x 7 bp repeats %28T%2FC%29CACCT%28G%2FA%29;gbkey=repeat_region
NC_003143.1	RefSeq	gene	2985405	2986982	.	+	.	ID=gene2568;Name=YPO2660;Dbxref=GeneID:1175490;gbkey=Gene;locus_tag=YPO2660
NC_003143.1	RefSeq	CDS	2985405	2986982	.	+	0	ID=cds2451;Name=YP_002347609.1;Parent=gene2568;Dbxref=InterPro:IPR000914,UniProtKB%2FTrEMBL:Q7CJS8,Genbank:YP_002347609.1,GeneID:1175490;gbkey=CDS;product=solute-binding protein;protein_id=YP_002347609.1;transl_table=11
NC_003143.1	RefSeq	region	2985417	2985485	.	+	.	ID=id1941;Note=1 probable transmembrane helix predicted;Dbxref=GeneID:1175490;gbkey=misc_feature
NC_003143.1	RefSeq	gene	2986979	2987950	.	+	.	ID=gene2569;Name=YPO2661;Dbxref=GeneID:1175491;gbkey=Gene;locus_tag=YPO2661
NC_003143.1	RefSeq	CDS	2986979	2987950	.	+	0	ID=cds2452;Name=YP_002347610.1;Parent=gene2569;Dbxref=InterPro:IPR000515,UniProtKB%2FTrEMBL:Q0WDM8,Genbank:YP_002347610.1,GeneID:1175491;gbkey=CDS;product=hypothetical protein;protein_id=YP_002347610.1;transl_table=11
NC_003143.1	RefSeq	gene	2987947	2988753	.	+	.	ID=gene2570;Name=YPO2662;Dbxref=GeneID:1175492;gbkey=Gene;locus_tag=YPO2662
NC_003143.1	RefSeq	CDS	2987947	2988753	.	+	0	ID=cds2453;Name=YP_002347611.1;Parent=gene2570;Dbxref=InterPro:IPR000515,UniProtKB%2FTrEMBL:Q7CJS7,Genbank:YP_002347611.1,GeneID:1175492;gbkey=CDS;product=binding-protein-dependent transport protein;protein_id=YP_002347611.1;transl_table=11
NC_003143.1	RefSeq	gene	2988753	2989559	.	+	.	ID=gene2571;Name=YPO2663;Dbxref=GeneID:1175493;gbkey=Gene;locus_tag=YPO2663
NC_003143.1	RefSeq	CDS	2988753	2989559	.	+	0	ID=cds2454;Name=YP_002347612.1;Parent=gene2571;Dbxref=InterPro:IPR003439,InterPro:IPR003593,UniProtKB%2FTrEMBL:Q7CJS6,Genbank:YP_002347612.1,GeneID:1175493;gbkey=CDS;product=transport ATPase;protein_id=YP_002347612.1;transl_table=11
NC_003143.1	RefSeq	region	2988879	2988902	.	+	.	ID=id1942;Note=PS00017 ATP%2FGTP-binding site motif A %28P-loop%29.;Dbxref=GeneID:1175493;gbkey=misc_feature
NC_003143.1	RefSeq	gene	2989552	2990217	.	+	.	ID=gene2572;Name=YPO2664;Dbxref=GeneID:1175494;gbkey=Gene;locus_tag=YPO2664
NC_003143.1	RefSeq	CDS	2989552	2990217	.	+	0	ID=cds2455;Name=YP_002347613.1;Parent=gene2572;Dbxref=InterPro:IPR003439,InterPro:IPR003593,UniProtKB%2FTrEMBL:Q0WDM5,Genbank:YP_002347613.1,GeneID:1175494;gbkey=CDS;product=transport ATPase;protein_id=YP_002347613.1;transl_table=11
NC_003143.1	RefSeq	region	2989651	2989674	.	+	.	ID=id1943;Note=PS00017 ATP%2FGTP-binding site motif A %28P-loop%29.;Dbxref=GeneID:1175494;gbkey=misc_feature
NC_003143.1	RefSeq	region	2989915	2989959	.	+	.	ID=id1944;Note=PS00211 ABC transporters family signature.;Dbxref=GeneID:1175494;gbkey=misc_feature
NC_003143.1	RefSeq	gene	2991416	2991718	.	+	.	ID=gene2573;Name=ureA;Dbxref=GeneID:1175495;gbkey=Gene;gene=ureA;gene_synonym=yeuA;locus_tag=YPO2665
NC_003143.1	RefSeq	CDS	2991416	2991718	.	+	0	ID=cds2456;Name=YP_002347614.1;Parent=gene2573;Note=UreA%2C with UreB and UreC catalyzes the hydrolysis of urea into ammonia and carbon dioxide%3B nickel metalloenzyme%3B accessory proteins UreD%2C UreE%2C UreF%2C and UreG are necessary for assembly of the metallocenter;Dbxref=InterPro:IPR002026,InterPro:IPR012010,UniProtKB%2FTrEMBL:Q0WDM4,Genbank:YP_002347614.1,GeneID:1175495;gbkey=CDS;gene=ureA;product=urease subunit gamma;protein_id=YP_002347614.1;transl_table=11
NC_003143.1	RefSeq	gene	2991771	2992205	.	+	.	ID=gene2574;Name=ureB;Dbxref=GeneID:1175496;gbkey=Gene;gene=ureB;gene_synonym=yeuB;locus_tag=YPO2666
NC_003143.1	RefSeq	CDS	2991771	2992205	.	+	0	ID=cds2457;Name=YP_002347615.1;Parent=gene2574;Note=ureases catalyze the hydrolysis of urea into ammonia and carbon dioxide%3B in Helicobacter pylori and Yersinia enterocolitica the ammonia released plays a key role in bacterial survival by neutralizing acids when colonizing the gastric mucosa%3B the holoenzyme is composed of 3 UreC %28alpha%29 and 3 UreAB %28gamma%2Fbeta%29;Dbxref=InterPro:IPR002019,UniProtKB%2FTrEMBL:Q0WDM3,Genbank:YP_002347615.1,GeneID:1175496;gbkey=CDS;gene=ureB;product=urease subunit beta;protein_id=YP_002347615.1;transl_table=11
NC_003143.1	RefSeq	gene	2992295	2994013	.	+	.	ID=gene2575;Name=ureC;Dbxref=GeneID:1175497;gbkey=Gene;gene=ureC;gene_synonym=yeuC;locus_tag=YPO2667
NC_003143.1	RefSeq	CDS	2992295	2994013	.	+	0	ID=cds2458;Name=YP_002347616.1;Parent=gene2575;Note=ureases catalyze the hydrolysis of urea into ammonia and carbon dioxide%3B in Yersinia enterocolitica the ammonia released plays a key role in bacterial survival by neutralizing acids when colonizing the gastric mucosa%3B the holoenzyme is composed of 3 ureC %28alpha%29 and 3 ureAB %28gamma%2Fbeta%29 subunits;Dbxref=InterPro:IPR005848,InterPro:IPR006680,InterPro:IPR008295,InterPro:IPR011059,InterPro:IPR011612,UniProtKB%2FTrEMBL:Q0WDM2,Genbank:YP_002347616.1,GeneID:1175497;gbkey=CDS;gene=ureC;product=urease subunit alpha;protein_id=YP_002347616.1;transl_table=11
NC_003143.1	RefSeq	region	2992688	2992729	.	+	.	ID=id1945;Note=PS01120 Urease nickel ligands signature.;Dbxref=GeneID:1175497;gbkey=misc_feature;gene=ureC
NC_003143.1	RefSeq	region	2993258	2993308	.	+	.	ID=id1946;Note=PS00145 Urease active site.;Dbxref=GeneID:1175497;gbkey=misc_feature;gene=ureC
NC_003143.1	RefSeq	gene	2994309	2995004	.	+	.	ID=gene2576;Name=ureE;Dbxref=GeneID:1175498;gbkey=Gene;gene=ureE;locus_tag=YPO2668
NC_003143.1	RefSeq	CDS	2994309	2995004	.	+	0	ID=cds2459;Name=YP_002347617.1;Parent=gene2576;Note=involved in the assembly of the urease metallocenter%3B possible nickel donor;Dbxref=InterPro:IPR004029,InterPro:IPR007864,InterPro:IPR012406,UniProtKB%2FTrEMBL:Q0WDM1,Genbank:YP_002347617.1,GeneID:1175498;gbkey=CDS;gene=ureE;product=urease accessory protein UreE;protein_id=YP_002347617.1;transl_table=11
NC_003143.1	RefSeq	gene	2995026	2995712	.	+	.	ID=gene2577;Name=ureF;Dbxref=GeneID:1175499;gbkey=Gene;gene=ureF;locus_tag=YPO2669
NC_003143.1	RefSeq	CDS	2995026	2995712	.	+	0	ID=cds2460;Name=YP_002347618.1;Parent=gene2577;Dbxref=InterPro:IPR002639,UniProtKB%2FTrEMBL:Q0WDM0,Genbank:YP_002347618.1,GeneID:1175499;gbkey=CDS;gene=ureF;product=urease accessory protein;protein_id=YP_002347618.1;transl_table=11
NC_003143.1	RefSeq	gene	2995839	2996501	.	+	.	ID=gene2578;Name=ureG;Dbxref=GeneID:1175500;gbkey=Gene;gene=ureG;locus_tag=YPO2670
NC_003143.1	RefSeq	CDS	2995839	2996501	.	+	0	ID=cds2461;Name=YP_002347619.1;Parent=gene2578;Dbxref=InterPro:IPR003495,InterPro:IPR004400,InterPro:IPR012202,UniProtKB%2FTrEMBL:Q0WDL9,Genbank:YP_002347619.1,GeneID:1175500;gbkey=CDS;gene=ureG;product=urease accessory protein;protein_id=YP_002347619.1;transl_table=11
NC_003143.1	RefSeq	region	2995890	2995913	.	+	.	ID=id1947;Note=PS00017 ATP%2FGTP-binding site motif A %28P-loop%29.;Dbxref=GeneID:1175500;gbkey=misc_feature;gene=ureG
NC_003143.1	RefSeq	gene	2996498	2997461	.	+	.	ID=gene2579;Name=ureD;Dbxref=GeneID:1175501;gbkey=Gene;gene=ureD;locus_tag=YPO2671;pseudo=true
NC_003143.1	RefSeq	region	2996753	2996785	.	+	.	ID=id1948;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site.;Dbxref=GeneID:1175501;gbkey=misc_feature;gene=ureD
NC_003143.1	RefSeq	gene	2997656	2998648	.	+	.	ID=gene2580;Name=YPO2672;Dbxref=GeneID:1175502;gbkey=Gene;locus_tag=YPO2672
NC_003143.1	RefSeq	CDS	2997656	2998648	.	+	0	ID=cds2462;Name=YP_002347620.1;Parent=gene2580;Dbxref=InterPro:IPR004937,UniProtKB%2FTrEMBL:Q7CJS5,Genbank:YP_002347620.1,GeneID:1175502;gbkey=CDS;product=urea transporter;protein_id=YP_002347620.1;transl_table=11
NC_003143.1	RefSeq	gene	2998797	2999855	.	+	.	ID=gene2581;Name=YPO2673;Dbxref=GeneID:1175503;gbkey=Gene;locus_tag=YPO2673
NC_003143.1	RefSeq	CDS	2998797	2999855	.	+	0	ID=cds2463;Name=YP_002347621.1;Parent=gene2581;Dbxref=InterPro:IPR004688,InterPro:IPR011541,UniProtKB%2FTrEMBL:Q0WDL7,Genbank:YP_002347621.1,GeneID:1175503;gbkey=CDS;product=nickel transport protein;protein_id=YP_002347621.1;transl_table=11
NC_003143.1	RefSeq	gene	3000024	3000353	.	-	.	ID=gene2582;Name=hdeB;Dbxref=GeneID:1175504;gbkey=Gene;gene=hdeB;locus_tag=YPO2674
NC_003143.1	RefSeq	CDS	3000024	3000353	.	-	0	ID=cds2464;Name=YP_002347622.1;Parent=gene2582;Dbxref=InterPro:IPR013329,UniProtKB%2FTrEMBL:Q7CJS4,Genbank:YP_002347622.1,GeneID:1175504;gbkey=CDS;gene=hdeB;product=acid-resistance protein;protein_id=YP_002347622.1;transl_table=11
NC_003143.1	RefSeq	gene	3000971	3002146	.	+	.	ID=gene2583;Name=YPO2675;Dbxref=GeneID:1175505;gbkey=Gene;locus_tag=YPO2675
NC_003143.1	RefSeq	CDS	3000971	3002146	.	+	0	ID=cds2465;Name=YP_002347623.1;Parent=gene2583;Dbxref=InterPro:IPR003148,InterPro:IPR013099,UniProtKB%2FTrEMBL:Q7CJS3,Genbank:YP_002347623.1,GeneID:1175505;gbkey=CDS;product=voltage-gated potassium channel;protein_id=YP_002347623.1;transl_table=11
NC_003143.1	RefSeq	gene	3002244	3002648	.	-	.	ID=gene2584;Name=ccrB;Dbxref=GeneID:1175506;gbkey=Gene;gene=ccrB;locus_tag=YPO2676
NC_003143.1	RefSeq	CDS	3002244	3002648	.	-	0	ID=cds2466;Name=YP_002347624.1;Parent=gene2584;Note=may be involved in chromosome condensation%3B overexpression in Escherichia coli protects against decondensation by camphor%3B overexpressing the protein results in an increase in supercoiling;Dbxref=InterPro:IPR003691,UniProtKB%2FTrEMBL:Q0WDL4,Genbank:YP_002347624.1,GeneID:1175506;gbkey=CDS;gene=ccrB;product=camphor resistance protein CrcB;protein_id=YP_002347624.1;transl_table=11
NC_003143.1	RefSeq	gene	3002664	3003044	.	-	.	ID=gene2585;Name=YPO2677;Dbxref=GeneID:1175507;gbkey=Gene;locus_tag=YPO2677
NC_003143.1	RefSeq	CDS	3002664	3003044	.	-	0	ID=cds2467;Name=YP_002347625.1;Parent=gene2585;Dbxref=InterPro:IPR003691,UniProtKB%2FTrEMBL:Q0WDL3,Genbank:YP_002347625.1,GeneID:1175507;gbkey=CDS;product=hypothetical protein;protein_id=YP_002347625.1;transl_table=11
NC_003143.1	RefSeq	gene	3003133	3003312	.	-	.	ID=gene2586;Name=YPO2677a;Dbxref=GeneID:16744770;gbkey=Gene;locus_tag=YPO2677a
NC_003143.1	RefSeq	CDS	3003133	3003312	.	-	0	ID=cds2468;Name=YP_008479721.1;Parent=gene2586;Dbxref=Genbank:YP_008479721.1,GeneID:16744770;gbkey=CDS;product=hypothetical protein;protein_id=YP_008479721.1;transl_table=11
NC_003143.1	RefSeq	gene	3004085	3004402	.	+	.	ID=gene2587;Name=celA;Dbxref=GeneID:1175508;gbkey=Gene;gene=celA;locus_tag=YPO2678
NC_003143.1	RefSeq	CDS	3004085	3004402	.	+	0	ID=cds2469;Name=YP_002347626.1;Parent=gene2587;Note=catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane%3B involved in N%2CN%27-diacetylchitobiose transport%3B protein IIA transfers a phosphoryl group to IIB which then transfers the phosphoryl group to the sugar%3B IIC forms the translocation channel for the sugar uptake;Dbxref=InterPro:IPR003501,InterPro:IPR013012,UniProtKB%2FTrEMBL:Q0WDL2,Genbank:YP_002347626.1,GeneID:1175508;gbkey=CDS;gene=celA;product=PTS system N%2CN%27-diacetylchitobiose-specific transporter subunit IIB;protein_id=YP_002347626.1;transl_table=11
NC_003143.1	RefSeq	gene	3004413	3005774	.	+	.	ID=gene2588;Name=celB;Dbxref=GeneID:1175509;gbkey=Gene;gene=celB;locus_tag=YPO2679
NC_003143.1	RefSeq	CDS	3004413	3005774	.	+	0	ID=cds2470;Name=YP_002347627.1;Parent=gene2588;Note=catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane%3B involved in N%2CN%27-diacetylchitobiose transport%3B protein IIA transfers a phosphoryl group to IIB which then transfers the phosphoryl group to the sugar%3B IIC forms the translocation channel for the sugar uptake;Dbxref=InterPro:IPR003352,InterPro:IPR004501,InterPro:IPR004796,UniProtKB%2FTrEMBL:Q7CJS1,Genbank:YP_002347627.1,GeneID:1175509;gbkey=CDS;gene=celB;product=PTS system N%2CN%27-diacetylchitobiose-specific transporter subunit IIC;protein_id=YP_002347627.1;transl_table=11
NC_003143.1	RefSeq	gene	3005941	3006288	.	+	.	ID=gene2589;Name=celC;Dbxref=GeneID:1175510;gbkey=Gene;gene=celC;locus_tag=YPO2680
NC_003143.1	RefSeq	CDS	3005941	3006288	.	+	0	ID=cds2471;Name=YP_002347628.1;Parent=gene2589;Note=catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane%3B involved N%2CN%27-diacetylchitobiose transport%3B protein IIA transfers a phosphoryl group to IIB which then transfers the phosphoryl group to the sugar%3B IIC forms the translocation channel for the sugar uptake;Dbxref=InterPro:IPR003188,UniProtKB%2FTrEMBL:Q7CJS0,Genbank:YP_002347628.1,GeneID:1175510;gbkey=CDS;gene=celC;product=PTS system N%2CN%27-diacetylchitobiose-specific transporter subunit IIA;protein_id=YP_002347628.1;transl_table=11
NC_003143.1	RefSeq	region	3006160	3006183	.	+	.	ID=id1949;Note=PS00017 ATP%2FGTP-binding site motif A %28P-loop%29.;Dbxref=GeneID:1175510;gbkey=misc_feature;gene=celC
NC_003143.1	RefSeq	gene	3006325	3007167	.	+	.	ID=gene2590;Name=celD;Dbxref=GeneID:1175511;gbkey=Gene;gene=celD;locus_tag=YPO2681
NC_003143.1	RefSeq	CDS	3006325	3007167	.	+	0	ID=cds2472;Name=YP_002347629.1;Parent=gene2590;Note=represses the celABCDF-ydjC operon involved in carbon uptake;Dbxref=InterPro:IPR000005,InterPro:IPR009057,InterPro:IPR011051,InterPro:IPR012287,InterPro:IPR013096,UniProtKB%2FTrEMBL:Q7CJR9,Genbank:YP_002347629.1,GeneID:1175511;gbkey=CDS;gene=celD;product=DNA-binding transcriptional regulator ChbR;protein_id=YP_002347629.1;transl_table=11
NC_003143.1	RefSeq	region	3006988	3007116	.	+	.	ID=id1950;Note=PS00041 Bacterial regulatory proteins%2C araC family signature.;Dbxref=GeneID:1175511;gbkey=misc_feature;gene=celD
NC_003143.1	RefSeq	gene	3007219	3007980	.	+	.	ID=gene2591;Name=YPO2682;Dbxref=GeneID:1175512;gbkey=Gene;locus_tag=YPO2682
NC_003143.1	RefSeq	CDS	3007219	3007980	.	+	0	ID=cds2473;Name=YP_002347630.1;Parent=gene2591;Dbxref=InterPro:IPR006879,UniProtKB%2FTrEMBL:Q0WDK8,Genbank:YP_002347630.1,GeneID:1175512;gbkey=CDS;product=hypothetical protein;protein_id=YP_002347630.1;transl_table=11
NC_003143.1	RefSeq	gene	3007987	3008163	.	-	.	ID=gene2592;Name=YPO2683;Dbxref=GeneID:1175513;gbkey=Gene;locus_tag=YPO2683
NC_003143.1	RefSeq	CDS	3007987	3008163	.	-	0	ID=cds2474;Name=YP_002347631.1;Parent=gene2592;Note=no significant database hits to the full length CDS;Dbxref=UniProtKB%2FTrEMBL:Q74ST8,Genbank:YP_002347631.1,GeneID:1175513;gbkey=CDS;product=hypothetical protein;protein_id=YP_002347631.1;transl_table=11
NC_003143.1	RefSeq	gene	3008275	3008643	.	-	.	ID=gene2593;Name=YPO2684;Dbxref=GeneID:1175514;gbkey=Gene;locus_tag=YPO2684
NC_003143.1	RefSeq	CDS	3008275	3008643	.	-	0	ID=cds2475;Name=YP_002347632.1;Parent=gene2593;Dbxref=UniProtKB%2FTrEMBL:Q7CJR8,Genbank:YP_002347632.1,GeneID:1175514;gbkey=CDS;product=hypothetical protein;protein_id=YP_002347632.1;transl_table=11
NC_003143.1	RefSeq	gene	3009138	3009665	.	+	.	ID=gene2594;Name=seqA;Dbxref=GeneID:1175515;gbkey=Gene;gene=seqA;locus_tag=YPO2685
NC_003143.1	RefSeq	CDS	3009138	3009665	.	+	0	ID=cds2476;Name=YP_002347633.1;Parent=gene2594;Note=negative modulator of the initiation of chromosome replication;Dbxref=InterPro:IPR005621,UniProtKB%2FTrEMBL:Q0WDK5,Genbank:YP_002347633.1,GeneID:1175515;gbkey=CDS;gene=seqA;product=replication initiation regulator SeqA;protein_id=YP_002347633.1;transl_table=11
NC_003143.1	RefSeq	gene	3009738	3011381	.	+	.	ID=gene2595;Name=pgm;Dbxref=GeneID:1175516;gbkey=Gene;gene=pgm;locus_tag=YPO2686
NC_003143.1	RefSeq	CDS	3009738	3011381	.	+	0	ID=cds2477;Name=YP_002347634.1;Parent=gene2595;Note=catalyzes the interconversion of alpha-D-glucose 1-phosphate to alpha-D-glucose 6-phosphate;Dbxref=InterPro:IPR005841,InterPro:IPR005843,InterPro:IPR005844,InterPro:IPR005845,InterPro:IPR005846,InterPro:IPR005852,UniProtKB%2FTrEMBL:Q0WDK4,Genbank:YP_002347634.1,GeneID:1175516;gbkey=CDS;gene=pgm;product=phosphoglucomutase;protein_id=YP_002347634.1;transl_table=11
NC_003143.1	RefSeq	region	3010155	3010199	.	+	.	ID=id1951;Note=PS00710 Phosphoglucomutase and phosphomannomutase phosphoserine signature.;Dbxref=GeneID:1175516;gbkey=misc_feature;gene=pgm
NC_003143.1	RefSeq	region	3010758	3010781	.	+	.	ID=id1952;Note=PS00017 ATP%2FGTP-binding site motif A %28P-loop%29.;Dbxref=GeneID:1175516;gbkey=misc_feature;gene=pgm
NC_003143.1	RefSeq	gene	3011755	3011997	.	+	.	ID=gene2596;Name=YPO2686a;Dbxref=GeneID:16744771;gbkey=Gene;locus_tag=YPO2686a
NC_003143.1	RefSeq	CDS	3011755	3011997	.	+	0	ID=cds2478;Name=YP_008479722.1;Parent=gene2596;Dbxref=Genbank:YP_008479722.1,GeneID:16744771;gbkey=CDS;product=hypothetical protein;protein_id=YP_008479722.1;transl_table=11
NC_003143.1	RefSeq	gene	3012125	3012553	.	-	.	ID=gene2597;Name=YPO2687;Dbxref=GeneID:1175517;gbkey=Gene;locus_tag=YPO2687
NC_003143.1	RefSeq	CDS	3012125	3012553	.	-	0	ID=cds2479;Name=YP_002347635.1;Parent=gene2597;Dbxref=InterPro:IPR000620,UniProtKB%2FTrEMBL:Q7CJR7,Genbank:YP_002347635.1,GeneID:1175517;gbkey=CDS;product=hypothetical protein;protein_id=YP_002347635.1;transl_table=11
NC_003143.1	RefSeq	gene	3012648	3013277	.	-	.	ID=gene2598;Name=kdpE;Dbxref=GeneID:1175518;gbkey=Gene;gene=kdpE;locus_tag=YPO2688
NC_003143.1	RefSeq	CDS	3012648	3013277	.	-	0	ID=cds2480;Name=YP_002347636.1;Parent=gene2598;Note=response regulator in two-component regulatory system with KdpD%3B regulates the kdp operon involved in potassium transport;Dbxref=InterPro:IPR001789,InterPro:IPR001867,InterPro:IPR011006,UniProtKB%2FTrEMBL:Q7CJR6,Genbank:YP_002347636.1,GeneID:1175518;gbkey=CDS;gene=kdpE;product=DNA-binding transcriptional activator KdpE;protein_id=YP_002347636.1;transl_table=11
NC_003143.1	RefSeq	gene	3013570	3016296	.	-	.	ID=gene2599;Name=kdpD;Dbxref=GeneID:1175519;gbkey=Gene;gene=kdpD;locus_tag=YPO2689
NC_003143.1	RefSeq	CDS	3013570	3016296	.	-	0	ID=cds2481;Name=YP_002347637.1;Parent=gene2599;Note=sensory histidine kinase in two-component regulatory system with KdpE%3B signal sensing protein;Dbxref=InterPro:IPR002345,InterPro:IPR003018,InterPro:IPR003594,InterPro:IPR003661,InterPro:IPR003852,InterPro:IPR004358,InterPro:IPR005467,InterPro:IPR006016,InterPro:IPR009082,InterPro:IPR013811,UniProtKB%2FTrEMBL:Q7CJR5,Genbank:YP_002347637.1,GeneID:1175519;gbkey=CDS;gene=kdpD;product=sensor protein KdpD;protein_id=YP_002347637.1;transl_table=11
NC_003143.1	RefSeq	region	3013852	3013890	.	-	.	ID=id1953;Note=PS00213 Lipocalin signature.;Dbxref=GeneID:1175519;gbkey=misc_feature;gene=kdpD
NC_003143.1	RefSeq	region	3016180	3016203	.	-	.	ID=id1954;Note=PS00017 ATP%2FGTP-binding site motif A %28P-loop%29.;Dbxref=GeneID:1175519;gbkey=misc_feature;gene=kdpD
NC_003143.1	RefSeq	gene	3016306	3016908	.	-	.	ID=gene2600;Name=kdpC;Dbxref=GeneID:1175520;gbkey=Gene;gene=kdpC;locus_tag=YPO2690
NC_003143.1	RefSeq	CDS	3016306	3016908	.	-	0	ID=cds2482;Name=YP_002347638.1;Parent=gene2600;Note=One of the components of the high-affinity ATP-driven potassium transport %28or KDP%29system%2C which catalyzes the hydrolysis of ATP coupled with the exchange of hydrogen and potassium ions. The C subunit may be involved in assembly of the KDP complex;Dbxref=InterPro:IPR003820,UniProtKB%2FTrEMBL:Q0WDK0,Genbank:YP_002347638.1,GeneID:1175520;gbkey=CDS;gene=kdpC;product=potassium-transporting ATPase subunit C;protein_id=YP_002347638.1;transl_table=11
NC_003143.1	RefSeq	region	3016831	3016896	.	-	.	ID=id1955;Note=1 probable transmembrane helix predicted;Dbxref=GeneID:1175520;gbkey=misc_feature;gene=kdpC
NC_003143.1	RefSeq	gene	3017120	3019186	.	-	.	ID=gene2601;Name=kdpB;Dbxref=GeneID:1175521;gbkey=Gene;gene=kdpB;locus_tag=YPO2691
NC_003143.1	RefSeq	CDS	3017120	3019186	.	-	0	ID=cds2483;Name=YP_002347639.1;Parent=gene2601;Note=One of the components of the high-affinity ATP-driven potassium transport %28or KDP%29 system%2C which catalyzes the hydrolysis of ATP coupled with the exchange of hydrogen and potassium ions;Dbxref=InterPro:IPR001757,InterPro:IPR005834,InterPro:IPR006391,InterPro:IPR008250,UniProtKB%2FTrEMBL:Q0WDJ9,Genbank:YP_002347639.1,GeneID:1175521;gbkey=CDS;gene=kdpB;product=potassium-transporting ATPase subunit B;protein_id=YP_002347639.1;transl_table=11
NC_003143.1	RefSeq	region	3018230	3018250	.	-	.	ID=id1956;Note=PS00154 E1-E2 ATPases phosphorylation site.;Dbxref=GeneID:1175521;gbkey=misc_feature;gene=kdpB
NC_003143.1	RefSeq	gene	3019280	3020968	.	-	.	ID=gene2602;Name=kdpA;Dbxref=GeneID:1175522;gbkey=Gene;gene=kdpA;locus_tag=YPO2692
NC_003143.1	RefSeq	CDS	3019280	3020968	.	-	0	ID=cds2484;Name=YP_002347640.1;Parent=gene2602;Note=catalyzes the hydrolysis of ATP coupled with the exchange of hydrogen and potassium ions;Dbxref=InterPro:IPR004623,UniProtKB%2FTrEMBL:Q0WDJ8,Genbank:YP_002347640.1,GeneID:1175522;gbkey=CDS;gene=kdpA;product=potassium-transporting ATPase subunit A;protein_id=YP_002347640.1;transl_table=11
NC_003143.1	RefSeq	gene	3021463	3021669	.	+	.	ID=gene2603;Name=ybfA;Dbxref=GeneID:1175523;gbkey=Gene;gene=ybfA;locus_tag=YPO2693
NC_003143.1	RefSeq	CDS	3021463	3021669	.	+	0	ID=cds2485;Name=YP_002347641.1;Parent=gene2603;Dbxref=UniProtKB%2FTrEMBL:Q0WDJ7,Genbank:YP_002347641.1,GeneID:1175523;gbkey=CDS;gene=ybfA;product=hypothetical protein;protein_id=YP_002347641.1;transl_table=11
NC_003143.1	RefSeq	region	3021499	3021558	.	+	.	ID=id1957;Note=1 probable transmembrane helix predicted;Dbxref=GeneID:1175523;gbkey=misc_feature;gene=ybfA
NC_003143.1	RefSeq	gene	3022008	3022490	.	+	.	ID=gene2604;Name=YPO2694;Dbxref=GeneID:1175524;gbkey=Gene;locus_tag=YPO2694
NC_003143.1	RefSeq	CDS	3022008	3022490	.	+	0	ID=cds2486;Name=YP_002347642.1;Parent=gene2604;Dbxref=InterPro:IPR013560,UniProtKB%2FTrEMBL:Q7CJR4,Genbank:YP_002347642.1,GeneID:1175524;gbkey=CDS;product=hypothetical protein;protein_id=YP_002347642.1;transl_table=11
NC_003143.1	RefSeq	gene	3022620	3024083	.	+	.	ID=gene2605;Name=phrB;Dbxref=GeneID:1175525;gbkey=Gene;gene=phrB;locus_tag=YPO2695
NC_003143.1	RefSeq	CDS	3022620	3024083	.	+	0	ID=cds2487;Name=YP_002347643.1;Parent=gene2605;Note=UV-induced DNA repair%3B converts cyclobutane-type pyrimidine dimers created during exposure to UV ratiation to monomers%3B light dependent;Dbxref=InterPro:IPR002081,InterPro:IPR005101,InterPro:IPR006050,InterPro:IPR006051,UniProtKB%2FTrEMBL:Q7CJR3,Genbank:YP_002347643.1,GeneID:1175525;gbkey=CDS;gene=phrB;product=deoxyribodipyrimidine photolyase;protein_id=YP_002347643.1;transl_table=11
NC_003143.1	RefSeq	region	3023592	3023630	.	+	.	ID=id1958;Note=PS00394 DNA photolyases class 1 signature 1.;Dbxref=GeneID:1175525;gbkey=misc_feature;gene=phrB
NC_003143.1	RefSeq	region	3023652	3023711	.	+	.	ID=id1959;Note=PS00691 DNA photolyases class 1 signature 2.;Dbxref=GeneID:1175525;gbkey=misc_feature;gene=phrB
NC_003143.1	RefSeq	gene	3024080	3025111	.	+	.	ID=gene2606;Name=phrB;Dbxref=GeneID:1175526;gbkey=Gene;gene=phrB;locus_tag=YPO2696
NC_003143.1	RefSeq	CDS	3024080	3025111	.	+	0	ID=cds2488;Name=YP_002347644.1;Parent=gene2606;Dbxref=InterPro:IPR000396,InterPro:IPR011563,UniProtKB%2FTrEMBL:Q0WDJ4,Genbank:YP_002347644.1,GeneID:1175526;gbkey=CDS;product=3%27%2C5%27-cyclic-nucleotide phosphodiesterase;protein_id=YP_002347644.1;transl_table=11
NC_003143.1	RefSeq	region	3024425	3024469	.	+	.	ID=id1960;Note=PS00607 cAMP phosphodiesterases class-II signature.;Dbxref=GeneID:1175526;gbkey=misc_feature
NC_003143.1	RefSeq	gene	3025234	3025980	.	+	.	ID=gene2607;Name=YPO2697;Dbxref=GeneID:1175527;gbkey=Gene;locus_tag=YPO2697
NC_003143.1	RefSeq	CDS	3025234	3025980	.	+	0	ID=cds2489;Name=YP_002347645.1;Parent=gene2607;Dbxref=InterPro:IPR002678,Genbank:YP_002347645.1,GeneID:1175527;gbkey=CDS;product=hydrolase-oxidase;protein_id=YP_002347645.1;transl_table=11
NC_003143.1	RefSeq	gene	3026599	3027252	.	+	.	ID=gene2608;Name=YPO2698;Dbxref=GeneID:1175528;gbkey=Gene;locus_tag=YPO2698;pseudo=true
NC_003143.1	RefSeq	region	3026599	3027252	.	+	.	ID=id1961;Note=Similar to Escherichia coli hypothetical protein YbgJ SW:YBGJ_ECOLI %28P75744%29 %28218 aa%29 fasta scores: E%28%29: 0%2C71.1%25 id in 218 aa%2C and to Haemophilus influenzae hypothetical protein HI1731 SW:YBGJ_HAEIN %28P44299%29 %28213 aa%29 fasta scores: E%28%29: 0%2C 48.3%25 id in 209 aa. Contains a nonsense mutation %28amber%29 at codon 182 which results in the deletion of 35 C-terminal amino acids. Effect on the function of the protein is unknown. The sequence has been checked and is believed to be correct;Dbxref=GeneID:1175528;gbkey=misc_feature;pseudo=true
NC_003143.1	RefSeq	gene	3027249	3028199	.	+	.	ID=gene2609;Name=YPO2699;Dbxref=GeneID:1175529;gbkey=Gene;locus_tag=YPO2699
NC_003143.1	RefSeq	CDS	3027249	3028199	.	+	0	ID=cds2490;Name=YP_002347646.1;Parent=gene2609;Dbxref=InterPro:IPR003778,UniProtKB%2FTrEMBL:Q7CJR2,Genbank:YP_002347646.1,GeneID:1175529;gbkey=CDS;product=hypothetical protein;protein_id=YP_002347646.1;transl_table=11
NC_003143.1	RefSeq	gene	3028196	3028933	.	+	.	ID=gene2610;Name=YPO2700;Dbxref=GeneID:1175530;gbkey=Gene;locus_tag=YPO2700
NC_003143.1	RefSeq	CDS	3028196	3028933	.	+	0	ID=cds2491;Name=YP_002347647.1;Parent=gene2610;Dbxref=InterPro:IPR005501,UniProtKB%2FTrEMBL:Q0WDJ1,Genbank:YP_002347647.1,GeneID:1175530;gbkey=CDS;product=LamB%2FYcsF family protein;protein_id=YP_002347647.1;transl_table=11
NC_003143.1	RefSeq	gene	3029018	3029749	.	+	.	ID=gene2611;Name=YPO2701;Dbxref=GeneID:1175531;gbkey=Gene;locus_tag=YPO2701
NC_003143.1	RefSeq	CDS	3029018	3029749	.	+	0	ID=cds2492;Name=YP_002347648.1;Parent=gene2611;Dbxref=InterPro:IPR010374,UniProtKB%2FTrEMBL:Q7CJR1,Genbank:YP_002347648.1,GeneID:1175531;gbkey=CDS;product=hypothetical protein;protein_id=YP_002347648.1;transl_table=11
NC_003143.1	RefSeq	gene	3029746	3030765	.	+	.	ID=gene2612;Name=YPO2702;Dbxref=GeneID:1175532;gbkey=Gene;locus_tag=YPO2702
NC_003143.1	RefSeq	CDS	3029746	3030765	.	+	0	ID=cds2493;Name=YP_002347649.1;Parent=gene2612;Dbxref=InterPro:IPR009323,UniProtKB%2FTrEMBL:Q74SS4,Genbank:YP_002347649.1,GeneID:1175532;gbkey=CDS;product=hypothetical protein;protein_id=YP_002347649.1;transl_table=11
NC_003143.1	RefSeq	gene	3030775	3031422	.	+	.	ID=gene2613;Name=pcp;Dbxref=GeneID:1175533;gbkey=Gene;gene=pcp;locus_tag=YPO2703
NC_003143.1	RefSeq	CDS	3030775	3031422	.	+	0	ID=cds2494;Name=YP_002347650.1;Parent=gene2613;Note=catalyzes the removal of 5-oxoproline from various penultimate amino acid residues except L-proline;Dbxref=InterPro:IPR000816,UniProtKB%2FTrEMBL:Q0WDI8,Genbank:YP_002347650.1,GeneID:1175533;gbkey=CDS;gene=pcp;product=pyrrolidone-carboxylate peptidase;protein_id=YP_002347650.1;transl_table=11
NC_003143.1	RefSeq	region	3031003	3031038	.	+	.	ID=id1962;Note=PS01333 Pyrrolidone-carboxylate peptidase glutamic acid active site.;Dbxref=GeneID:1175533;gbkey=misc_feature;gene=pcp
NC_003143.1	RefSeq	region	3031159	3031206	.	+	.	ID=id1963;Note=PS01334 Pyrrolidone-carboxylate peptidase cysteine active site.;Dbxref=GeneID:1175533;gbkey=misc_feature;gene=pcp
NC_003143.1	RefSeq	gene	3031513	3032199	.	-	.	ID=gene2614;Name=ung;Dbxref=GeneID:1175534;gbkey=Gene;gene=ung;locus_tag=YPO2704
NC_003143.1	RefSeq	CDS	3031513	3032199	.	-	0	ID=cds2495;Name=YP_002347651.1;Parent=gene2614;Note=Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine;Dbxref=InterPro:IPR002043,InterPro:IPR003249,InterPro:IPR005122,UniProtKB%2FTrEMBL:Q0WDI7,Genbank:YP_002347651.1,GeneID:1175534;gbkey=CDS;gene=ung;product=uracil-DNA glycosylase;protein_id=YP_002347651.1;transl_table=11
NC_003143.1	RefSeq	region	3032002	3032031	.	-	.	ID=id1964;Note=PS00130 Uracil-DNA glycosylase signature.;Dbxref=GeneID:1175534;gbkey=misc_feature;gene=ung
NC_003143.1	RefSeq	region	3032092	3032115	.	-	.	ID=id1965;Note=PS00017 ATP%2FGTP-binding site motif A %28P-loop%29.;Dbxref=GeneID:1175534;gbkey=misc_feature;gene=ung
NC_003143.1	RefSeq	gene	3032552	3032935	.	+	.	ID=gene2615;Name=YPO2705;Dbxref=GeneID:1175535;gbkey=Gene;locus_tag=YPO2705
NC_003143.1	RefSeq	CDS	3032552	3032935	.	+	0	ID=cds2496;Name=YP_002347652.1;Parent=gene2615;Note=stress-induced glycyl radical protein that can replace an oxidatively damaged pyruvate formate-lyase subunit;Dbxref=InterPro:IPR001150,InterPro:IPR011140,UniProtKB%2FTrEMBL:Q0WDI6,Genbank:YP_002347652.1,GeneID:1175535;gbkey=CDS;product=autonomous glycyl radical cofactor GrcA;protein_id=YP_002347652.1;transl_table=11
NC_003143.1	RefSeq	region	3032840	3032866	.	+	.	ID=id1966;Note=PS00850 Glycine radical signature.;Dbxref=GeneID:1175535;gbkey=misc_feature
NC_003143.1	RefSeq	gene	3033114	3034076	.	+	.	ID=gene2616;Name=plaA;Dbxref=GeneID:1175536;gbkey=Gene;gene=plaA;gene_synonym=yplA;locus_tag=YPO2706
NC_003143.1	RefSeq	CDS	3033114	3034076	.	+	0	ID=cds2497;Name=YP_002347653.1;Parent=gene2616;Dbxref=InterPro:IPR008262,UniProtKB%2FTrEMBL:Q74SS2,Genbank:YP_002347653.1,GeneID:1175536;gbkey=CDS;gene=plaA;product=phospholipase A;protein_id=YP_002347653.1;transl_table=11
NC_003143.1	RefSeq	region	3033681	3033710	.	+	.	ID=id1967;Note=PS00120 Lipases%2C serine active site.;Dbxref=GeneID:1175536;gbkey=misc_feature;gene=plaA
NC_003143.1	RefSeq	gene	3034154	3034810	.	+	.	ID=gene2617;Name=yplB;Dbxref=GeneID:1175537;gbkey=Gene;gene=yplB;locus_tag=YPO2707
NC_003143.1	RefSeq	CDS	3034154	3034810	.	+	0	ID=cds2498;Name=YP_002347654.1;Parent=gene2617;Dbxref=InterPro:IPR002110,UniProtKB%2FTrEMBL:Q8D103,Genbank:YP_002347654.1,GeneID:1175537;gbkey=CDS;gene=yplB;product=phospholipase A accessory protein;protein_id=YP_002347654.1;transl_table=11
NC_003143.1	RefSeq	gene	3034941	3036266	.	-	.	ID=gene2618;Name=srmB;Dbxref=GeneID:1175538;gbkey=Gene;gene=srmB;locus_tag=YPO2708
NC_003143.1	RefSeq	CDS	3034941	3036266	.	-	0	ID=cds2499;Name=YP_002347655.1;Parent=gene2618;Note=facilitates an early step in the assembly of the 50S subunit of the ribosome;Dbxref=InterPro:IPR000629,InterPro:IPR001650,InterPro:IPR011545,InterPro:IPR014001,InterPro:IPR014014,InterPro:IPR014021,UniProtKB%2FTrEMBL:Q7CJR0,Genbank:YP_002347655.1,GeneID:1175538;gbkey=CDS;gene=srmB;product=ATP-dependent RNA helicase SrmB;protein_id=YP_002347655.1;transl_table=11
NC_003143.1	RefSeq	region	3035778	3035804	.	-	.	ID=id1968;Note=PS00039 DEAD-box subfamily ATP-dependent helicases signature.;Dbxref=GeneID:1175538;gbkey=misc_feature;gene=srmB
NC_003143.1	RefSeq	region	3036102	3036125	.	-	.	ID=id1969;Note=PS00017 ATP%2FGTP-binding site motif A %28P-loop%29.;Dbxref=GeneID:1175538;gbkey=misc_feature;gene=srmB
NC_003143.1	RefSeq	gene	3036506	3037264	.	+	.	ID=gene2619;Name=YPO2709;Dbxref=GeneID:1175539;gbkey=Gene;locus_tag=YPO2709
NC_003143.1	RefSeq	CDS	3036506	3037264	.	+	0	ID=cds2500;Name=YP_002347656.1;Parent=gene2619;Dbxref=InterPro:IPR002052,InterPro:IPR002296,InterPro:IPR013217,UniProtKB%2FTrEMBL:Q74SR9,Genbank:YP_002347656.1,GeneID:1175539;gbkey=CDS;product=hypothetical protein;protein_id=YP_002347656.1;transl_table=11
NC_003143.1	RefSeq	region	3036881	3036901	.	+	.	ID=id1970;Note=PS00092 N-6 Adenine-specific DNA methylases signature.;Dbxref=GeneID:1175539;gbkey=misc_feature
NC_003143.1	RefSeq	gene	3037547	3039184	.	-	.	ID=gene2620;Name=nadB;Dbxref=GeneID:1175540;gbkey=Gene;gene=nadB;gene_synonym=nicB;locus_tag=YPO2710
NC_003143.1	RefSeq	CDS	3037547	3039184	.	-	0	ID=cds2501;Name=YP_002347657.1;Parent=gene2620;Note=catalyzes the formation of oxaloacetate from L-aspartate;Dbxref=InterPro:IPR003953,InterPro:IPR004112,InterPro:IPR005288,UniProtKB%2FTrEMBL:Q0WDI1,Genbank:YP_002347657.1,GeneID:1175540;gbkey=CDS;gene=nadB;product=L-aspartate oxidase;protein_id=YP_002347657.1;transl_table=11
NC_003143.1	RefSeq	gene	3039372	3039947	.	+	.	ID=gene2621;Name=rpoE;Dbxref=GeneID:1175541;gbkey=Gene;gene=rpoE;gene_synonym=sigE;locus_tag=YPO2711
NC_003143.1	RefSeq	CDS	3039372	3039947	.	+	0	ID=cds2502;Name=YP_002347658.1;Parent=gene2621;Note=Member of the extracytoplasmic function sigma factors which are active under specific conditions%3B binds with the catalytic core of RNA polymerase to produce the holoenzyme and directs bacterial core RNA polymerase to specific promoter elements to initiate transcription%3B this sigma factor is involved in heat shock and oxidative stress response;Dbxref=InterPro:IPR000838,InterPro:IPR007627,InterPro:IPR013249,InterPro:IPR013324,InterPro:IPR013325,UniProtKB%2FTrEMBL:Q7CJQ9,Genbank:YP_002347658.1,GeneID:1175541;gbkey=CDS;gene=rpoE;product=RNA polymerase sigma factor RpoE;protein_id=YP_002347658.1;transl_table=11
NC_003143.1	RefSeq	region	3039507	3039602	.	+	.	ID=id1971;Note=PS01063 Sigma-70 factors ECF subfamily signature.;Dbxref=GeneID:1175541;gbkey=misc_feature;gene=rpoE
NC_003143.1	RefSeq	region	3039831	3039896	.	+	.	ID=id1972;Note=Predicted helix-turn-helix motif with score 1179 %28%2B3.20 SD%29 at aa 154-175%2C sequence LSYEEIAAIMDCPVGTVRSRIF;Dbxref=GeneID:1175541;gbkey=misc_feature;gene=rpoE
NC_003143.1	RefSeq	gene	3039973	3040629	.	+	.	ID=gene2622;Name=rseA;Dbxref=GeneID:1175542;gbkey=Gene;gene=rseA;locus_tag=YPO2712
NC_003143.1	RefSeq	CDS	3039973	3040629	.	+	0	ID=cds2503;Name=YP_002347659.1;Parent=gene2622;Dbxref=InterPro:IPR005572,InterPro:IPR005573,UniProtKB%2FTrEMBL:Q7CJQ8,Genbank:YP_002347659.1,GeneID:1175542;gbkey=CDS;gene=rseA;product=anti-RNA polymerase sigma factor SigE;protein_id=YP_002347659.1;transl_table=11
NC_003143.1	RefSeq	gene	3040629	3041585	.	+	.	ID=gene2623;Name=rseB;Dbxref=GeneID:1175543;gbkey=Gene;gene=rseB;locus_tag=YPO2713
NC_003143.1	RefSeq	CDS	3040629	3041585	.	+	0	ID=cds2504;Name=YP_002347660.1;Parent=gene2623;Note=periplasmic protein%3B interacts with the C-terminal domain of RseA and stimulates RseA binding to sigmaE via the cytoplasmic RseA N-terminal domain which then sequesters sigmaE in the membrane thereby preventing sigmaE associated with core RNAP;Dbxref=InterPro:IPR005588,UniProtKB%2FTrEMBL:Q7CJQ7,Genbank:YP_002347660.1,GeneID:1175543;gbkey=CDS;gene=rseB;product=periplasmic negative regulator of sigmaE;protein_id=YP_002347660.1;transl_table=11
NC_003143.1	RefSeq	gene	3041582	3042037	.	+	.	ID=gene2624;Name=rseC;Dbxref=GeneID:1175544;gbkey=Gene;gene=rseC;locus_tag=YPO2714
NC_003143.1	RefSeq	CDS	3041582	3042037	.	+	0	ID=cds2505;Name=YP_002347661.1;Parent=gene2624;Note=involved in the reduction of the SoxR iron-sulfur cluster;Dbxref=InterPro:IPR007359,UniProtKB%2FTrEMBL:Q7CJQ6,Genbank:YP_002347661.1,GeneID:1175544;gbkey=CDS;gene=rseC;product=SoxR reducing system protein RseC;protein_id=YP_002347661.1;transl_table=11
NC_003143.1	RefSeq	gene	3042058	3042912	.	-	.	ID=gene2625;Name=lepA;Dbxref=GeneID:1175545;gbkey=Gene;gene=lepA;locus_tag=YPO2715
NC_003143.1	RefSeq	CDS	3042058	3042912	.	-	0	ID=cds2506;Name=YP_002347662.1;Parent=gene2625;Dbxref=UniProtKB%2FTrEMBL:Q0WDH6,Genbank:YP_002347662.1,GeneID:1175545;gbkey=CDS;gene=lepA;product=hypothetical protein;protein_id=YP_002347662.1;transl_table=11
NC_003143.1	RefSeq	gene	3043412	3045211	.	+	.	ID=gene2626;Name=lepA;Dbxref=GeneID:1175546;gbkey=Gene;gene=lepA;locus_tag=YPO2716
NC_003143.1	RefSeq	CDS	3043412	3045211	.	+	0	ID=cds2507;Name=YP_002347663.1;Parent=gene2626;Note=binds to the ribosome on the universally-conserved alpha-sarcin loop;Dbxref=InterPro:IPR000178,InterPro:IPR000640,InterPro:IPR000795,InterPro:IPR001806,InterPro:IPR004161,InterPro:IPR005225,InterPro:IPR006297,InterPro:IPR009022,InterPro:IPR013842,UniProtKB%2FTrEMBL:Q0WDH5,Genbank:YP_002347663.1,GeneID:1175546;gbkey=CDS;gene=lepA;product=GTP-binding protein LepA;protein_id=YP_002347663.1;transl_table=11
NC_003143.1	RefSeq	region	3043442	3043465	.	+	.	ID=id1973;Note=PS00017 ATP%2FGTP-binding site motif A %28P-loop%29.;Dbxref=GeneID:1175546;gbkey=misc_feature;gene=lepA
NC_003143.1	RefSeq	region	3043535	3043582	.	+	.	ID=id1974;Note=PS00301 GTP-binding elongation factors signature.;Dbxref=GeneID:1175546;gbkey=misc_feature;gene=lepA
NC_003143.1	RefSeq	gene	3045221	3046219	.	+	.	ID=gene2627;Name=lepB;Dbxref=GeneID:1175547;gbkey=Gene;gene=lepB;locus_tag=YPO2717
NC_003143.1	RefSeq	CDS	3045221	3046219	.	+	0	ID=cds2508;Name=YP_002347664.1;Parent=gene2627;Note=catalyzes the cleavage of the amino-terminal leader peptide from secretory proteins;Dbxref=InterPro:IPR000223,InterPro:IPR006198,InterPro:IPR011056,UniProtKB%2FTrEMBL:Q7CJQ5,Genbank:YP_002347664.1,GeneID:1175547;gbkey=CDS;gene=lepB;product=signal peptidase I;protein_id=YP_002347664.1;transl_table=11
NC_003143.1	RefSeq	region	3045506	3045529	.	+	.	ID=id1975;Note=PS00501 Signal peptidases I serine active site.;Dbxref=GeneID:1175547;gbkey=misc_feature;gene=lepB
NC_003143.1	RefSeq	region	3045677	3045715	.	+	.	ID=id1976;Note=PS00760 Signal peptidases I lysine active site.;Dbxref=GeneID:1175547;gbkey=misc_feature;gene=lepB
NC_003143.1	RefSeq	region	3046049	3046090	.	+	.	ID=id1977;Note=PS00761 Signal peptidases I signature 3.;Dbxref=GeneID:1175547;gbkey=misc_feature;gene=lepB
NC_003143.1	RefSeq	gene	3046571	3047251	.	+	.	ID=gene2628;Name=rnc;Dbxref=GeneID:1175548;gbkey=Gene;gene=rnc;locus_tag=YPO2718
NC_003143.1	RefSeq	CDS	3046571	3047251	.	+	0	ID=cds2509;Name=YP_002347665.1;Parent=gene2628;Note=cytoplasmic enzyme involved in processing rRNA and some mRNAs%3B substrates typically have dsRNA regions%3B forms a homodimer%3B have N-terminal nuclease and C-terminal RNA-binding domains%3B requires magnesium as preferred ion for activity;Dbxref=InterPro:IPR000999,InterPro:IPR001159,InterPro:IPR011907,UniProtKB%2FTrEMBL:Q0WDH3,Genbank:YP_002347665.1,GeneID:1175548;gbkey=CDS;gene=rnc;product=ribonuclease III;protein_id=YP_002347665.1;transl_table=11
NC_003143.1	RefSeq	region	3046682	3046708	.	+	.	ID=id1978;Note=PS00517 Ribonuclease III family signature.;Dbxref=GeneID:1175548;gbkey=misc_feature;gene=rnc
NC_003143.1	RefSeq	gene	3047248	3048159	.	+	.	ID=gene2629;Name=era;Dbxref=GeneID:1175549;gbkey=Gene;gene=era;gene_synonym=rbaA;locus_tag=YPO2719
NC_003143.1	RefSeq	CDS	3047248	3048159	.	+	0	ID=cds2510;Name=YP_002347666.1;Parent=gene2629;Note=Era%3B Escherichia coli Ras-like protein%3B Bex%3B Bacillus Era-complementing segment%3B essential protein in Escherichia coli that is involved in many cellular processes%3B GTPase%3B binds the cell membrane through apparent C-terminal domain%3B mutants are arrested during the cell cycle%3B Streptococcus pneumoniae Era binds to RNA and Escherichia coli Era binds 16S rRNA and 30S ribosome;Dbxref=InterPro:IPR002917,InterPro:IPR004044,InterPro:IPR005225,InterPro:IPR005289,InterPro:IPR005662,InterPro:IPR009019,UniProtKB%2FTrEMBL:Q0WDH2,Genbank:YP_002347666.1,GeneID:1175549;gbkey=CDS;gene=era;product=GTP-binding protein Era;protein_id=YP_002347666.1;transl_table=11
NC_003143.1	RefSeq	region	3047293	3047316	.	+	.	ID=id1979;Note=PS00017 ATP%2FGTP-binding site motif A %28P-loop%29.;Dbxref=GeneID:1175549;gbkey=misc_feature;gene=era
NC_003143.1	RefSeq	gene	3048169	3048894	.	+	.	ID=gene2630;Name=recO;Dbxref=GeneID:1175550;gbkey=Gene;gene=recO;locus_tag=YPO2720
NC_003143.1	RefSeq	CDS	3048169	3048894	.	+	0	ID=cds2511;Name=YP_002347667.1;Parent=gene2630;Note=involved in DNA repair and RecFOR pathway recombination%3B RecFOR proteins displace ssDNA-binding protein and facilitate the production of RecA-coated ssDNA;Dbxref=InterPro:IPR003717,UniProtKB%2FTrEMBL:Q0WDH1,Genbank:YP_002347667.1,GeneID:1175550;gbkey=CDS;gene=recO;product=DNA repair protein RecO;protein_id=YP_002347667.1;transl_table=11
NC_003143.1	RefSeq	repeat_region	3048935	3050888	.	+	.	ID=id1980;Note=insertion sequence:IS100;gbkey=repeat_region
NC_003143.1	RefSeq	repeat_region	3048935	3048962	.	+	.	ID=id1981;Note=IS100 inverted repeat;gbkey=repeat_region
NC_003143.1	RefSeq	gene	3049021	3050043	.	+	.	ID=gene2631;Name=y1093;Dbxref=GeneID:1175551;gbkey=Gene;gene=y1093;gene_synonym=ypmt1;locus_tag=YPO2721
NC_003143.1	RefSeq	CDS	3049021	3050043	.	+	0	ID=cds2512;Name=YP_002347668.1;Parent=gene2631;Dbxref=InterPro:IPR001584,InterPro:IPR006120,InterPro:IPR009057,InterPro:IPR012287,InterPro:IPR012337,UniProtKB%2FTrEMBL:Q7ARN5,Genbank:YP_002347668.1,GeneID:1175551;gbkey=CDS;gene=y1093;product=transposase for insertion sequence IS100;protein_id=YP_002347668.1;transl_table=11
NC_003143.1	RefSeq	region	3049072	3049137	.	+	.	ID=id1982;Note=Predicted helix-turn-helix motif with score 2147 %28%2B6.50 SD%29 at aa 18-39%2C sequence MSSRAIARELGISRNTVKRYLQ;Dbxref=GeneID:1175551;gbkey=misc_feature;gene=y1093
NC_003143.1	RefSeq	gene	3050040	3050822	.	+	.	ID=gene2632;Name=YPO2722;Note=ypmt1.57c;Dbxref=GeneID:1175552;gbkey=Gene;locus_tag=YPO2722
NC_003143.1	RefSeq	CDS	3050040	3050822	.	+	0	ID=cds2513;Name=YP_002347669.1;Parent=gene2632;Dbxref=InterPro:IPR001270,InterPro:IPR002611,InterPro:IPR003593,UniProtKB%2FTrEMBL:Q7ARK4,Genbank:YP_002347669.1,GeneID:1175552;gbkey=CDS;product=transposase%2FIS protein;protein_id=YP_002347669.1;transl_table=11
NC_003143.1	RefSeq	region	3050367	3050390	.	+	.	ID=id1983;Note=PS00017 ATP%2FGTP-binding site motif A %28P-loop%29.;Dbxref=GeneID:1175552;gbkey=misc_feature
NC_003143.1	RefSeq	repeat_region	3050861	3050888	.	-	.	ID=id1984;Note=IS100 inverted repeat;gbkey=repeat_region
NC_003143.1	RefSeq	region	3051108	3051176	.	+	.	ID=id1985;Note=1 probable transmembrane helix predicted;gbkey=misc_feature
NC_003143.1	RefSeq	gene	3051683	3055510	.	+	.	ID=gene2633;Name=YPO2724;Dbxref=GeneID:1175554;gbkey=Gene;locus_tag=YPO2724
NC_003143.1	RefSeq	CDS	3051683	3055510	.	+	0	ID=cds2514;Name=YP_002347671.1;Parent=gene2633;Dbxref=InterPro:IPR009612,InterPro:IPR010623,UniProtKB%2FTrEMBL:Q0WDG7,Genbank:YP_002347671.1,GeneID:1175554;gbkey=CDS;product=hypothetical protein;protein_id=YP_002347671.1;transl_table=11
NC_003143.1	RefSeq	region	3052265	3052288	.	+	.	ID=id1986;Note=PS00017 ATP%2FGTP-binding site motif A %28P-loop%29.;Dbxref=GeneID:1175554;gbkey=misc_feature
NC_003143.1	RefSeq	region	3052532	3052555	.	+	.	ID=id1987;Note=PS00017 ATP%2FGTP-binding site motif A %28P-loop%29.;Dbxref=GeneID:1175554;gbkey=misc_feature
NC_003143.1	RefSeq	gene	3055804	3058569	.	+	.	ID=gene2634;Name=YPO2725;Dbxref=GeneID:1175555;gbkey=Gene;locus_tag=YPO2725
NC_003143.1	RefSeq	CDS	3055804	3058569	.	+	0	ID=cds2515;Name=YP_002347672.1;Parent=gene2634;Dbxref=InterPro:IPR006533,UniProtKB%2FTrEMBL:Q0WDG6,Genbank:YP_002347672.1,GeneID:1175555;gbkey=CDS;product=hypothetical protein;protein_id=YP_002347672.1;transl_table=11
NC_003143.1	RefSeq	repeat_region	3058042	3058527	.	+	.	ID=id1988;Note=GC rich DNA repeat%2C ACAACGGCACCGCCGGAA x 27;Dbxref=GeneID:1175555;gbkey=repeat_region
NC_003143.1	RefSeq	gene	3058928	3059776	.	+	.	ID=gene2635;Name=YPO2726;Dbxref=GeneID:1175556;gbkey=Gene;locus_tag=YPO2726
NC_003143.1	RefSeq	CDS	3058928	3059776	.	+	0	ID=cds2516;Name=YP_002347673.1;Parent=gene2635;Dbxref=InterPro:IPR008984,UniProtKB%2FTrEMBL:Q7CJC6,Genbank:YP_002347673.1,GeneID:1175556;gbkey=CDS;product=hypothetical protein;protein_id=YP_002347673.1;transl_table=11
NC_003143.1	RefSeq	region	3059285	3059308	.	+	.	ID=id1989;Note=PS00017 ATP%2FGTP-binding site motif A %28P-loop%29.;Dbxref=GeneID:1175556;gbkey=misc_feature
NC_003143.1	RefSeq	gene	3059796	3060602	.	+	.	ID=gene2636;Name=YPO2727;Dbxref=GeneID:1175557;gbkey=Gene;locus_tag=YPO2727
NC_003143.1	RefSeq	CDS	3059796	3060602	.	+	0	ID=cds2517;Name=YP_002347674.1;Parent=gene2636;Dbxref=InterPro:IPR009211,InterPro:IPR011990,UniProtKB%2FTrEMBL:Q7CJC5,Genbank:YP_002347674.1,GeneID:1175557;gbkey=CDS;product=hypothetical protein;protein_id=YP_002347674.1;transl_table=11
NC_003143.1	RefSeq	gene	3060699	3061178	.	+	.	ID=gene2637;Name=YPO2728;Dbxref=GeneID:1175558;gbkey=Gene;locus_tag=YPO2728
NC_003143.1	RefSeq	CDS	3060699	3061178	.	+	0	ID=cds2518;Name=YP_002347675.1;Parent=gene2637;Dbxref=InterPro:IPR010745,UniProtKB%2FTrEMBL:Q7CJC4,Genbank:YP_002347675.1,GeneID:1175558;gbkey=CDS;product=hypothetical protein;protein_id=YP_002347675.1;transl_table=11
NC_003143.1	RefSeq	gene	3061203	3061550	.	+	.	ID=gene2638;Name=YPO2729;Dbxref=GeneID:1175559;gbkey=Gene;locus_tag=YPO2729
NC_003143.1	RefSeq	CDS	3061203	3061550	.	+	0	ID=cds2519;Name=YP_002347676.1;Parent=gene2638;Dbxref=UniProtKB%2FTrEMBL:Q0WDG2,Genbank:YP_002347676.1,GeneID:1175559;gbkey=CDS;product=hypothetical protein;protein_id=YP_002347676.1;transl_table=11
NC_003143.1	RefSeq	gene	3061607	3061948	.	-	.	ID=gene2639;Name=YPO2730;Dbxref=GeneID:1175560;gbkey=Gene;locus_tag=YPO2730
NC_003143.1	RefSeq	CDS	3061607	3061948	.	-	0	ID=cds2520;Name=YP_002347677.1;Parent=gene2639;Dbxref=InterPro:IPR004624,InterPro:IPR013987,InterPro:IPR013988,UniProtKB%2FTrEMBL:Q7CJC3,Genbank:YP_002347677.1,GeneID:1175560;gbkey=CDS;product=hypothetical protein;protein_id=YP_002347677.1;transl_table=11
NC_003143.1	RefSeq	gene	3062324	3064363	.	-	.	ID=gene2640;Name=YPO2731;Dbxref=GeneID:1175561;gbkey=Gene;locus_tag=YPO2731
NC_003143.1	RefSeq	CDS	3062324	3064363	.	-	0	ID=cds2521;Name=YP_002347678.1;Parent=gene2640;Dbxref=UniProtKB%2FTrEMBL:Q0WDG0,Genbank:YP_002347678.1,GeneID:1175561;gbkey=CDS;product=hypothetical protein;protein_id=YP_002347678.1;transl_table=11
NC_003143.1	RefSeq	gene	3064368	3064910	.	-	.	ID=gene2641;Name=lemA;Dbxref=GeneID:1175562;gbkey=Gene;gene=lemA;locus_tag=YPO2732
NC_003143.1	RefSeq	CDS	3064368	3064910	.	-	0	ID=cds2522;Name=YP_002347679.1;Parent=gene2641;Dbxref=InterPro:IPR007156,UniProtKB%2FTrEMBL:Q74SX3,Genbank:YP_002347679.1,GeneID:1175562;gbkey=CDS;gene=lemA;product=hypothetical protein;protein_id=YP_002347679.1;transl_table=11
NC_003143.1	RefSeq	gene	3065197	3065271	.	+	.	ID=gene2642;Name=YPt_37;Dbxref=GeneID:1175563;gbkey=Gene;locus_tag=YPt_37
NC_003143.1	RefSeq	tRNA	3065197	3065271	.	+	.	ID=rna52;Parent=gene2642;Note=tRNA Arg anticodon CCT%2C Cove score 71.72;Dbxref=GeneID:1175563;gbkey=tRNA;product=tRNA-Arg
NC_003143.1	RefSeq	exon	3065197	3065271	.	+	.	ID=id1990;Parent=rna52;Note=tRNA Arg anticodon CCT%2C Cove score 71.72;Dbxref=GeneID:1175563;gbkey=tRNA;product=tRNA-Arg
NC_003143.1	RefSeq	gene	3065526	3065993	.	+	.	ID=gene2643;Name=YPO2733;Dbxref=GeneID:1175564;gbkey=Gene;locus_tag=YPO2733
NC_003143.1	RefSeq	CDS	3065526	3065993	.	+	0	ID=cds2523;Name=YP_002347680.1;Parent=gene2643;Note=No significant database matches. CDS DNA has a low GC content%2C 35.47%25.;Dbxref=UniProtKB%2FTrEMBL:Q74SX4,Genbank:YP_002347680.1,GeneID:1175564;gbkey=CDS;product=hypothetical protein;protein_id=YP_002347680.1;transl_table=11
NC_003143.1	RefSeq	gene	3066438	3067094	.	+	.	ID=gene2644;Name=ccmA;Dbxref=GeneID:1175565;gbkey=Gene;gene=ccmA;locus_tag=YPO2734
NC_003143.1	RefSeq	CDS	3066438	3067094	.	+	0	ID=cds2524;Name=YP_002347681.1;Parent=gene2644;Note=ATP-binding protein%3B required for proper cytochrome c maturation;Dbxref=InterPro:IPR003439,InterPro:IPR003593,InterPro:IPR005895,UniProtKB%2FTrEMBL:Q0WDF7,Genbank:YP_002347681.1,GeneID:1175565;gbkey=CDS;gene=ccmA;product=cytochrome c biogenesis protein CcmA;protein_id=YP_002347681.1;transl_table=11
NC_003143.1	RefSeq	region	3066537	3066560	.	+	.	ID=id1991;Note=PS00017 ATP%2FGTP-binding site motif A %28P-loop%29.;Dbxref=GeneID:1175565;gbkey=misc_feature;gene=ccmA
NC_003143.1	RefSeq	region	3066825	3066869	.	+	.	ID=id1992;Note=PS00211 ABC transporters family signature.;Dbxref=GeneID:1175565;gbkey=misc_feature;gene=ccmA
NC_003143.1	RefSeq	gene	3067064	3067723	.	+	.	ID=gene2645;Name=ccmB;Dbxref=GeneID:1175566;gbkey=Gene;gene=ccmB;locus_tag=YPO2735
NC_003143.1	RefSeq	CDS	3067064	3067723	.	+	0	ID=cds2525;Name=YP_002347682.1;Parent=gene2645;Dbxref=InterPro:IPR003544,UniProtKB%2FTrEMBL:Q0WDF6,Genbank:YP_002347682.1,GeneID:1175566;gbkey=CDS;gene=ccmB;product=heme exporter protein B;protein_id=YP_002347682.1;transl_table=11
NC_003143.1	RefSeq	region	3067080	3067091	.	+	.	ID=id1993;Note=PS00294 Prenyl group binding site %28CAAX box%29.;Dbxref=GeneID:1175565;gbkey=misc_feature;gene=ccmA
NC_003143.1	RefSeq	gene	3067786	3068523	.	+	.	ID=gene2646;Name=ccmC;Dbxref=GeneID:1175567;gbkey=Gene;gene=ccmC;locus_tag=YPO2736
NC_003143.1	RefSeq	CDS	3067786	3068523	.	+	0	ID=cds2526;Name=YP_002347683.1;Parent=gene2646;Dbxref=InterPro:IPR002541,InterPro:IPR003557,UniProtKB%2FTrEMBL:Q7CJC1,Genbank:YP_002347683.1,GeneID:1175567;gbkey=CDS;gene=ccmC;product=heme exporter protein C;protein_id=YP_002347683.1;transl_table=11
NC_003143.1	RefSeq	gene	3068520	3068822	.	+	.	ID=gene2647;Name=ccmD;Dbxref=GeneID:1175568;gbkey=Gene;gene=ccmD;locus_tag=YPO2737
NC_003143.1	RefSeq	CDS	3068520	3068822	.	+	0	ID=cds2527;Name=YP_002347684.1;Parent=gene2647;Dbxref=InterPro:IPR007078,UniProtKB%2FTrEMBL:Q7CJC0,Genbank:YP_002347684.1,GeneID:1175568;gbkey=CDS;gene=ccmD;product=heme exporter protein D;protein_id=YP_002347684.1;transl_table=11
NC_003143.1	RefSeq	region	3068562	3068630	.	+	.	ID=id1994;Note=1 probable transmembrane helix predicted;Dbxref=GeneID:1175568;gbkey=misc_feature;gene=ccmD
NC_003143.1	RefSeq	gene	3068819	3069313	.	+	.	ID=gene2648;Name=ccmE;Dbxref=GeneID:1175569;gbkey=Gene;gene=ccmE;locus_tag=YPO2738
NC_003143.1	RefSeq	CDS	3068819	3069313	.	+	0	ID=cds2528;Name=YP_002347685.1;Parent=gene2648;Note=CycJ%3B periplasmic heme chaperone that binds heme transiently via a histidine residue and delivers it to newly synthesized and exported c-type cytochromes%3B requires the ATP hydrolysis activity of the CcmA protein in order to transfer the heme to the apocytochrome%3B part of the cytochrome c maturation system%3B periplasmic protein anchored to the inner membrane;Dbxref=InterPro:IPR004329,UniProtKB%2FTrEMBL:Q0WDF3,Genbank:YP_002347685.1,GeneID:1175569;gbkey=CDS;gene=ccmE;product=cytochrome c-type biogenesis protein CcmE;protein_id=YP_002347685.1;transl_table=11
NC_003143.1	RefSeq	region	3068837	3068905	.	+	.	ID=id1995;Note=1 probable transmembrane helix predicted;Dbxref=GeneID:1175569;gbkey=misc_feature;gene=ccmE
NC_003143.1	RefSeq	gene	3069310	3071280	.	+	.	ID=gene2649;Name=ccmF;Dbxref=GeneID:1175570;gbkey=Gene;gene=ccmF;locus_tag=YPO2739
NC_003143.1	RefSeq	CDS	3069310	3071280	.	+	0	ID=cds2529;Name=YP_002347686.1;Parent=gene2649;Dbxref=InterPro:IPR002541,InterPro:IPR003567,InterPro:IPR003568,UniProtKB%2FTrEMBL:Q7CJB8,Genbank:YP_002347686.1,GeneID:1175570;gbkey=CDS;gene=ccmF;product=cytochrome c-type biogenesis protein;protein_id=YP_002347686.1;transl_table=11
NC_003143.1	RefSeq	gene	3071277	3071843	.	+	.	ID=gene2650;Name=ccmG;Dbxref=GeneID:1175571;gbkey=Gene;gene=ccmG;gene_synonym=dsbE;locus_tag=YPO2740
NC_003143.1	RefSeq	CDS	3071277	3071843	.	+	0	ID=cds2530;Name=YP_002347687.1;Parent=gene2650;Dbxref=InterPro:IPR004799,InterPro:IPR006662,InterPro:IPR011594,InterPro:IPR012335,InterPro:IPR012336,InterPro:IPR013740,UniProtKB%2FTrEMBL:Q0WDF1,Genbank:YP_002347687.1,GeneID:1175571;gbkey=CDS;gene=ccmG;product=thiol:disulfide interchange protein DsbE;protein_id=YP_002347687.1;transl_table=11
NC_003143.1	RefSeq	region	3071505	3071561	.	+	.	ID=id1996;Note=PS00194 Thioredoxin family active site.;Dbxref=GeneID:1175571;gbkey=misc_feature;gene=ccmG
NC_003143.1	RefSeq	gene	3071840	3072352	.	+	.	ID=gene2651;Name=ccmH;Dbxref=GeneID:1175572;gbkey=Gene;gene=ccmH;locus_tag=YPO2741
NC_003143.1	RefSeq	CDS	3071840	3072352	.	+	0	ID=cds2531;Name=YP_002347688.1;Parent=gene2651;Dbxref=InterPro:IPR005616,UniProtKB%2FTrEMBL:Q7CJB7,Genbank:YP_002347688.1,GeneID:1175572;gbkey=CDS;gene=ccmH;product=cytochrome c-type biogenesis protein;protein_id=YP_002347688.1;transl_table=11
NC_003143.1	RefSeq	gene	3072352	3073578	.	+	.	ID=gene2652;Name=ccmH;Dbxref=GeneID:1175573;gbkey=Gene;gene=ccmH;locus_tag=YP02742
NC_003143.1	RefSeq	CDS	3072352	3073578	.	+	0	ID=cds2532;Name=YP_002347689.1;Parent=gene2652;Dbxref=InterPro:IPR011990,InterPro:IPR013026,UniProtKB%2FTrEMBL:Q7CJB6,Genbank:YP_002347689.1,GeneID:1175573;gbkey=CDS;product=cytochrome c-type biogenesis protein;protein_id=YP_002347689.1;transl_table=11
NC_003143.1	RefSeq	gene	3073614	3074378	.	+	.	ID=gene2653;Name=vacJ;Dbxref=GeneID:1175574;gbkey=Gene;gene=vacJ;locus_tag=YPO2743
NC_003143.1	RefSeq	CDS	3073614	3074378	.	+	0	ID=cds2533;Name=YP_002347690.1;Parent=gene2653;Dbxref=InterPro:IPR007428,UniProtKB%2FTrEMBL:Q0WDE8,Genbank:YP_002347690.1,GeneID:1175574;gbkey=CDS;gene=vacJ;product=VacJ lipoprotein;protein_id=YP_002347690.1;transl_table=11
NC_003143.1	RefSeq	region	3073635	3073667	.	+	.	ID=id1997;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site.;Dbxref=GeneID:1175574;gbkey=misc_feature;gene=vacJ
NC_003143.1	RefSeq	gene	3074485	3075756	.	-	.	ID=gene2654;Name=fadL;Dbxref=GeneID:1175575;gbkey=Gene;gene=fadL;gene_synonym=ttr;locus_tag=YPO2744
NC_003143.1	RefSeq	CDS	3074485	3075756	.	-	0	ID=cds2534;Name=YP_002347691.1;Parent=gene2654;Dbxref=InterPro:IPR005017,UniProtKB%2FTrEMBL:Q74SY3,Genbank:YP_002347691.1,GeneID:1175575;gbkey=CDS;gene=fadL;product=long-chain fatty acid outer membrane transporter;protein_id=YP_002347691.1;transl_table=11
NC_003143.1	RefSeq	region	3075475	3075498	.	-	.	ID=id1998;Note=PS00017 ATP%2FGTP-binding site motif A %28P-loop%29.;Dbxref=GeneID:1175575;gbkey=misc_feature;gene=fadL
NC_003143.1	RefSeq	gene	3076164	3076460	.	+	.	ID=gene2655;Name=YPO2745;Dbxref=GeneID:1175576;gbkey=Gene;locus_tag=YPO2745
NC_003143.1	RefSeq	CDS	3076164	3076460	.	+	0	ID=cds2535;Name=YP_002347692.1;Parent=gene2655;Dbxref=InterPro:IPR005272,Genbank:YP_002347692.1,GeneID:1175576;gbkey=CDS;product=hypothetical protein;protein_id=YP_002347692.1;transl_table=11
NC_003143.1	RefSeq	gene	3076747	3078057	.	+	.	ID=gene2656;Name=fadI;Dbxref=GeneID:1175577;gbkey=Gene;gene=fadI;locus_tag=YPO2746
NC_003143.1	RefSeq	CDS	3076747	3078057	.	+	0	ID=cds2536;Name=YP_002347693.1;Parent=gene2656;Note=FadI%3B fatty acid oxidation complex component beta%3B functions in a heterotetramer with FadJ%3B similar to FadA2B2 complex%3B functions in beta-oxidation of fatty acids during anaerobic growth;Dbxref=InterPro:IPR002155,InterPro:IPR012806,UniProtKB%2FTrEMBL:Q0WDE5,Genbank:YP_002347693.1,GeneID:1175577;gbkey=CDS;gene=fadI;product=3-ketoacyl-CoA thiolase;protein_id=YP_002347693.1;transl_table=11
NC_003143.1	RefSeq	region	3077029	3077085	.	+	.	ID=id1999;Note=PS00098 Thiolases acyl-enzyme intermediate signature.;Dbxref=GeneID:1175577;gbkey=misc_feature;gene=fadI
NC_003143.1	RefSeq	region	3077890	3077940	.	+	.	ID=id2000;Note=PS00737 Thiolases signature 2.;Dbxref=GeneID:1175577;gbkey=misc_feature;gene=fadI
NC_003143.1	RefSeq	region	3077995	3078036	.	+	.	ID=id2001;Note=PS00099 Thiolases active site.;Dbxref=GeneID:1175577;gbkey=misc_feature;gene=fadI
NC_003143.1	RefSeq	gene	3078057	3080381	.	+	.	ID=gene2657;Name=fadJ;Dbxref=GeneID:1175578;gbkey=Gene;gene=fadJ;locus_tag=YPO2747
NC_003143.1	RefSeq	CDS	3078057	3080381	.	+	0	ID=cds2537;Name=YP_002347694.1;Parent=gene2657;Note=multifunctional enoyl-CoA hydratase%2F3-hydroxyacyl-CoA dehydrogenase%2F3-hydroxybutyryl-CoA epimerase%3B catalyzes the formation of an hydroxyacyl-CoA by addition of water on enoyl-CoA%3B exhibits 3-hydroxyacyl-CoA epimerase and 3-hydroxyacyl-CoA dehydrogenase activities: forms a heterotetramer with FadI%3B similar to FadA2B2 complex%3B involved in the anaerobic degradation of long and medium-chain fatty acids in the presence of nitrate;Dbxref=InterPro:IPR001753,InterPro:IPR006108,InterPro:IPR006176,InterPro:IPR006180,InterPro:IPR008927,InterPro:IPR012802,UniProtKB%2FTrEMBL:Q0WDE4,Genbank:YP_002347694.1,GeneID:1175578;gbkey=CDS;gene=fadJ;product=multifunctional fatty acid oxidation complex subunit alpha;protein_id=YP_002347694.1;transl_table=11
NC_003143.1	RefSeq	region	3079623	3079697	.	+	.	ID=id2002;Note=PS00067 3-hydroxyacyl-CoA dehydrogenase signature.;Dbxref=GeneID:1175578;gbkey=misc_feature;gene=fadJ
NC_003143.1	RefSeq	gene	3080950	3081441	.	+	.	ID=gene2658;Name=sixA;Dbxref=GeneID:1175579;gbkey=Gene;gene=sixA;locus_tag=YPO2748
NC_003143.1	RefSeq	CDS	3080950	3081441	.	+	0	ID=cds2538;Name=YP_002347695.1;Parent=gene2658;Dbxref=InterPro:IPR004449,InterPro:IPR013078,UniProtKB%2FTrEMBL:Q7CJB4,Genbank:YP_002347695.1,GeneID:1175579;gbkey=CDS;gene=sixA;product=phosphohistidine phosphatase;protein_id=YP_002347695.1;transl_table=11
NC_003143.1	RefSeq	repeat_region	3081534	3081685	.	+	.	ID=id2003;Note=19 x 8bp repeats %28G%2FA%29CTTATTG;gbkey=repeat_region
NC_003143.1	RefSeq	gene	3081827	3082357	.	-	.	ID=gene2659;Name=YPO2749;Dbxref=GeneID:1175580;gbkey=Gene;locus_tag=YPO2749
NC_003143.1	RefSeq	CDS	3081827	3082357	.	-	0	ID=cds2539;Name=YP_002347696.1;Parent=gene2659;Dbxref=InterPro:IPR002625,Genbank:YP_002347696.1,GeneID:1175580;gbkey=CDS;product=hypothetical protein;protein_id=YP_002347696.1;transl_table=11
NC_003143.1	RefSeq	gene	3082727	3083659	.	+	.	ID=gene2660;Name=YPO2750;Dbxref=GeneID:1175581;gbkey=Gene;locus_tag=YPO2750
NC_003143.1	RefSeq	CDS	3082727	3083659	.	+	0	ID=cds2540;Name=YP_002347697.1;Parent=gene2660;Note=involved in methylation of ribosomal protein L3;Dbxref=InterPro:IPR002052,InterPro:IPR004556,InterPro:IPR007848,UniProtKB%2FTrEMBL:Q0WDE1,Genbank:YP_002347697.1,GeneID:1175581;gbkey=CDS;product=N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase;protein_id=YP_002347697.1;transl_table=11
NC_003143.1	RefSeq	region	3083336	3083356	.	+	.	ID=id2004;Note=PS00092 N-6 Adenine-specific DNA methylases signature.;Dbxref=GeneID:1175581;gbkey=misc_feature
NC_003143.1	RefSeq	gene	3083736	3084821	.	+	.	ID=gene2661;Name=aroC;Dbxref=GeneID:1175582;gbkey=Gene;gene=aroC;locus_tag=YPO2751
NC_003143.1	RefSeq	CDS	3083736	3084821	.	+	0	ID=cds2541;Name=YP_002347698.1;Parent=gene2661;Note=catalyzes the formation of chorismate from 5-O-%281-carboxyvinyl%29-3-phosphoshikimate in aromatic amino acid biosynthesis;Dbxref=InterPro:IPR000453,UniProtKB%2FTrEMBL:Q0WDE0,Genbank:YP_002347698.1,GeneID:1175582;gbkey=CDS;gene=aroC;product=chorismate synthase;protein_id=YP_002347698.1;transl_table=11
NC_003143.1	RefSeq	region	3083781	3083828	.	+	.	ID=id2005;Note=PS00787 Chorismate synthase signature 1.;Dbxref=GeneID:1175582;gbkey=misc_feature;gene=aroC
NC_003143.1	RefSeq	region	3084105	3084149	.	+	.	ID=id2006;Note=PS00788 Chorismate synthase signature 2.;Dbxref=GeneID:1175582;gbkey=misc_feature;gene=aroC
NC_003143.1	RefSeq	region	3084690	3084740	.	+	.	ID=id2007;Note=PS00789 Chorismate synthase signature 3.;Dbxref=GeneID:1175582;gbkey=misc_feature;gene=aroC
NC_003143.1	RefSeq	gene	3084827	3085654	.	+	.	ID=gene2662;Name=mepA;Dbxref=GeneID:1175583;gbkey=Gene;gene=mepA;locus_tag=YPO2752
NC_003143.1	RefSeq	CDS	3084827	3085654	.	+	0	ID=cds2542;Name=YP_002347699.1;Parent=gene2662;Note=D-alanyl-D-alanine endopeptidase%3B functions in hydrolyzing cell wall peptidoglycan%3B similar to LAS metallopeptidases%3B forms a dimer in periplasm;Dbxref=InterPro:IPR005073,InterPro:IPR009045,UniProtKB%2FTrEMBL:Q0WDD9,Genbank:YP_002347699.1,GeneID:1175583;gbkey=CDS;gene=mepA;product=penicillin-insensitive murein endopeptidase;protein_id=YP_002347699.1;transl_table=11
NC_003143.1	RefSeq	gene	3085658	3086464	.	+	.	ID=gene2663;Name=yfcA;Dbxref=GeneID:1175584;gbkey=Gene;gene=yfcA;locus_tag=YPO2753
NC_003143.1	RefSeq	CDS	3085658	3086464	.	+	0	ID=cds2543;Name=YP_002347700.1;Parent=gene2663;Dbxref=InterPro:IPR002781,UniProtKB%2FTrEMBL:Q7CJB3,Genbank:YP_002347700.1,GeneID:1175584;gbkey=CDS;gene=yfcA;product=hypothetical protein;protein_id=YP_002347700.1;transl_table=11
NC_003143.1	RefSeq	gene	3086564	3087106	.	+	.	ID=gene2664;Name=YPO2754;Dbxref=GeneID:1175585;gbkey=Gene;locus_tag=YPO2754
NC_003143.1	RefSeq	CDS	3086564	3087106	.	+	0	ID=cds2544;Name=YP_002347701.1;Parent=gene2664;Dbxref=InterPro:IPR007411,UniProtKB%2FTrEMBL:Q7CJB2,Genbank:YP_002347701.1,GeneID:1175585;gbkey=CDS;product=hypothetical protein;protein_id=YP_002347701.1;transl_table=11
NC_003143.1	RefSeq	gene	3087164	3087442	.	+	.	ID=gene2665;Name=YPO2755;Dbxref=GeneID:1175586;gbkey=Gene;locus_tag=YPO2755
NC_003143.1	RefSeq	CDS	3087164	3087442	.	+	0	ID=cds2545;Name=YP_002347702.1;Parent=gene2665;Dbxref=UniProtKB%2FTrEMBL:Q0WDD6,Genbank:YP_002347702.1,GeneID:1175586;gbkey=CDS;product=hypothetical protein;protein_id=YP_002347702.1;transl_table=11
NC_003143.1	RefSeq	gene	3087620	3089689	.	-	.	ID=gene2666;Name=mnmC;Dbxref=GeneID:1175587;gbkey=Gene;gene=mnmC;locus_tag=YPO2756
NC_003143.1	RefSeq	CDS	3087620	3089689	.	-	0	ID=cds2546;Name=YP_002347703.1;Parent=gene2666;Note=catalyzes the formation of 5-methylaminomethyl-2-thiouridine in position 34 of the anticodon of tRNA molecules;Dbxref=InterPro:IPR006076,InterPro:IPR008471,UniProtKB%2FTrEMBL:Q0WDD5,Genbank:YP_002347703.1,GeneID:1175587;gbkey=CDS;gene=mnmC;product=5-methylaminomethyl-2-thiouridine methyltransferase;protein_id=YP_002347703.1;transl_table=11
NC_003143.1	RefSeq	gene	3089861	3091084	.	+	.	ID=gene2667;Name=fabB;Dbxref=GeneID:1175588;gbkey=Gene;gene=fabB;gene_synonym=fabC;locus_tag=YPO2757
NC_003143.1	RefSeq	CDS	3089861	3091084	.	+	0	ID=cds2547;Name=YP_002347704.1;Parent=gene2667;Note=FabB%2C beta-Ketoacyl-ACP synthase I%2C KASI%3B catalyzes a condensation reaction in fatty acid biosynthesis: addition of an acyl acceptor of two carbons from malonyl-ACP%3B required for the elongation of short-chain unsaturated acyl-ACP;Dbxref=InterPro:IPR000794,UniProtKB%2FTrEMBL:Q7CJB1,Genbank:YP_002347704.1,GeneID:1175588;gbkey=CDS;gene=fabB;product=3-oxoacyl-ACP synthase;protein_id=YP_002347704.1;transl_table=11
NC_003143.1	RefSeq	region	3090323	3090373	.	+	.	ID=id2008;Note=PS00606 Beta-ketoacyl synthases active site.;Dbxref=GeneID:1175588;gbkey=misc_feature;gene=fabB
NC_003143.1	RefSeq	region	3090854	3090886	.	+	.	ID=id2009;Note=PS00639 Eukaryotic thiol %28cysteine%29 proteases histidine active site.;Dbxref=GeneID:1175588;gbkey=misc_feature;gene=fabB
NC_003143.1	RefSeq	gene	3091492	3092187	.	-	.	ID=gene2668;Name=YPO2758;Dbxref=GeneID:1175589;gbkey=Gene;locus_tag=YPO2758
NC_003143.1	RefSeq	CDS	3091492	3092187	.	-	0	ID=cds2548;Name=YP_002347705.1;Parent=gene2668;Dbxref=InterPro:IPR001920,InterPro:IPR004380,UniProtKB%2FTrEMBL:Q74SZ5,Genbank:YP_002347705.1,GeneID:1175589;gbkey=CDS;product=aspartate%2Fglutamate racemase;protein_id=YP_002347705.1;transl_table=11
NC_003143.1	RefSeq	region	3091921	3091950	.	-	.	ID=id2010;Note=PS00923 Aspartate and glutamate racemases signature 1.;Dbxref=GeneID:1175589;gbkey=misc_feature
NC_003143.1	RefSeq	gene	3092975	3093505	.	+	.	ID=gene2669;Name=mrpA;Dbxref=GeneID:1175590;gbkey=Gene;gene=mrpA;gene_synonym=smfA;locus_tag=YPO2759
NC_003143.1	RefSeq	CDS	3092975	3093505	.	+	0	ID=cds2549;Name=YP_002347706.1;Parent=gene2669;Dbxref=InterPro:IPR000259,InterPro:IPR008966,UniProtKB%2FTrEMBL:Q7CJB0,Genbank:YP_002347706.1,GeneID:1175590;gbkey=CDS;gene=mrpA;product=mannose-resistant fimbrial protein;protein_id=YP_002347706.1;transl_table=11
NC_003143.1	RefSeq	region	3093359	3093382	.	+	.	ID=id2011;Note=PS00017 ATP%2FGTP-binding site motif A %28P-loop%29.;Dbxref=GeneID:1175590;gbkey=misc_feature;gene=mrpA
NC_003143.1	RefSeq	gene	3093847	3094884	.	-	.	ID=gene2670;Name=flk;Dbxref=GeneID:1175591;gbkey=Gene;gene=flk;locus_tag=YPO2760
NC_003143.1	RefSeq	CDS	3093847	3094884	.	-	0	ID=cds2550;Name=YP_002347707.1;Parent=gene2670;Note=in Salmonella typhimurium Flk regulates flagellar biosynthesis by inhibition of the flagellar-associated type III secretion system%3B lowers secretion levels of the anti-sigma28 factor FlgM to the periplasm%3B inner membrane-anchored protein;Dbxref=UniProtKB%2FTrEMBL:Q7CJA9,Genbank:YP_002347707.1,GeneID:1175591;gbkey=CDS;gene=flk;product=flagella biosynthesis regulator;protein_id=YP_002347707.1;transl_table=11
NC_003143.1	RefSeq	region	3093853	3093903	.	-	.	ID=id2012;Note=1 probable transmembrane helix predicted;Dbxref=GeneID:1175591;gbkey=misc_feature;gene=flk
NC_003143.1	RefSeq	gene	3095169	3096086	.	-	.	ID=gene2671;Name=YPO2761;Dbxref=GeneID:1175592;gbkey=Gene;locus_tag=YPO2761
NC_003143.1	RefSeq	CDS	3095169	3096086	.	-	0	ID=cds2551;Name=YP_002347708.1;Parent=gene2671;Dbxref=InterPro:IPR000620,UniProtKB%2FTrEMBL:Q7CJA8,Genbank:YP_002347708.1,GeneID:1175592;gbkey=CDS;product=hypothetical protein;protein_id=YP_002347708.1;transl_table=11
NC_003143.1	RefSeq	gene	3096312	3097097	.	+	.	ID=gene2672;Name=YPO2762;Dbxref=GeneID:1175593;gbkey=Gene;locus_tag=YPO2762
NC_003143.1	RefSeq	CDS	3096312	3097097	.	+	0	ID=cds2552;Name=YP_002347709.1;Parent=gene2672;Dbxref=InterPro:IPR000005,InterPro:IPR009057,InterPro:IPR011051,InterPro:IPR012287,InterPro:IPR013096,UniProtKB%2FTrEMBL:Q7CJA7,Genbank:YP_002347709.1,GeneID:1175593;gbkey=CDS;product=AraC family transcriptional regulator;protein_id=YP_002347709.1;transl_table=11
NC_003143.1	RefSeq	region	3096828	3096893	.	+	.	ID=id2013;Note=Predicted helix-turn-helix motif with score 1304 %28%2B3.63 SD%29 at aa 134-155%2C sequence TSLALWAKRVYTTERTLSRRCQ;Dbxref=GeneID:1175593;gbkey=misc_feature
NC_003143.1	RefSeq	region	3096930	3097061	.	+	.	ID=id2014;Note=PS00041 Bacterial regulatory proteins%2C araC family signature.;Dbxref=GeneID:1175593;gbkey=misc_feature
NC_003143.1	RefSeq	gene	3097144	3098271	.	+	.	ID=gene2673;Name=pdxB;Dbxref=GeneID:1175594;gbkey=Gene;gene=pdxB;locus_tag=YPO2763
NC_003143.1	RefSeq	CDS	3097144	3098271	.	+	0	ID=cds2553;Name=YP_002347710.1;Parent=gene2673;Dbxref=InterPro:IPR006139,InterPro:IPR006140,UniProtKB%2FTrEMBL:Q0WDC8,Genbank:YP_002347710.1,GeneID:1175594;gbkey=CDS;gene=pdxB;product=D-isomer specific 2-hydroxyacid dehydrogenase;protein_id=YP_002347710.1;transl_table=11
NC_003143.1	RefSeq	region	3097498	3097581	.	+	.	ID=id2015;Note=PS00065 D-isomer specific 2-hydroxyacid dehydrogenases NAD-binding signature.;Dbxref=GeneID:1175594;gbkey=misc_feature;gene=pdxB
NC_003143.1	RefSeq	region	3097732	3097782	.	+	.	ID=id2016;Note=PS00671 D-isomer specific 2-hydroxyacid dehydrogenases signature 3.;Dbxref=GeneID:1175594;gbkey=misc_feature;gene=pdxB
NC_003143.1	RefSeq	repeat_region	3098307	3099018	.	-	.	ID=id2017;Note=Contains a %27G%27 at nucleotide position 315%7EIS200-like insertion sequence:IS1541;gbkey=repeat_region
NC_003143.1	RefSeq	gene	3098415	3098873	.	-	.	ID=gene2674;Name=tnp;Dbxref=GeneID:1175595;gbkey=Gene;gene=tnp;locus_tag=YPO2764
NC_003143.1	RefSeq	CDS	3098415	3098873	.	-	0	ID=cds2554;Name=YP_002347711.1;Parent=gene2674;Dbxref=InterPro:IPR002686,UniProtKB%2FTrEMBL:Q74YM6,Genbank:YP_002347711.1,GeneID:1175595;gbkey=CDS;gene=tnp;product=transposase for the IS1541 insertion element;protein_id=YP_002347711.1;transl_table=11
NC_003143.1	RefSeq	gene	3099152	3100162	.	+	.	ID=gene2675;Name=asd;Dbxref=GeneID:1175596;gbkey=Gene;gene=asd;gene_synonym=usg-1;locus_tag=YPO2765
NC_003143.1	RefSeq	CDS	3099152	3100162	.	+	0	ID=cds2555;Name=YP_002347712.1;Parent=gene2675;Dbxref=InterPro:IPR000534,InterPro:IPR012080,InterPro:IPR012280,UniProtKB%2FTrEMBL:Q7CJA6,Genbank:YP_002347712.1,GeneID:1175596;gbkey=CDS;gene=asd;product=semialdehyde dehydrogenase;protein_id=YP_002347712.1;transl_table=11
NC_003143.1	RefSeq	gene	3100249	3101043	.	+	.	ID=gene2676;Name=truA;Dbxref=GeneID:1175597;gbkey=Gene;gene=truA;gene_synonym=hisT,leuK,truA;locus_tag=YPO2766
NC_003143.1	RefSeq	CDS	3100249	3101043	.	+	0	ID=cds2556;Name=YP_002347713.1;Parent=gene2676;Note=mediates pseudouridylation %28positions 38%2C 39%2C 40%29 at the tRNA anticodon region which contributes to the structural stability;Dbxref=InterPro:IPR001406,UniProtKB%2FTrEMBL:Q0WDC5,Genbank:YP_002347713.1,GeneID:1175597;gbkey=CDS;gene=truA;product=tRNA pseudouridine synthase A;protein_id=YP_002347713.1;transl_table=11
NC_003143.1	RefSeq	gene	3101200	3101862	.	+	.	ID=gene2677;Name=dedA;Dbxref=GeneID:1175598;gbkey=Gene;gene=dedA;locus_tag=YPO2767
NC_003143.1	RefSeq	CDS	3101200	3101862	.	+	0	ID=cds2557;Name=YP_002347714.1;Parent=gene2677;Dbxref=UniProtKB%2FTrEMBL:Q74T01,Genbank:YP_002347714.1,GeneID:1175598;gbkey=CDS;gene=dedA;product=hypothetical protein;protein_id=YP_002347714.1;transl_table=11
NC_003143.1	RefSeq	gene	3102093	3103007	.	+	.	ID=gene2678;Name=accD;Dbxref=GeneID:1175599;gbkey=Gene;gene=accD;gene_synonym=dedB,usg;locus_tag=YPO2768
NC_003143.1	RefSeq	CDS	3102093	3103007	.	+	0	ID=cds2558;Name=YP_002347715.1;Parent=gene2678;Note=catalyzes the carboxylation of acetyl-CoA to malonyl-CoA%3B forms a tetramer of AccA2D2 subunits;Dbxref=InterPro:IPR000022,InterPro:IPR000438,InterPro:IPR011762,UniProtKB%2FTrEMBL:Q0WDC3,Genbank:YP_002347715.1,GeneID:1175599;gbkey=CDS;gene=accD;product=acetyl-CoA carboxylase subunit beta;protein_id=YP_002347715.1;transl_table=11
NC_003143.1	RefSeq	gene	3103256	3104560	.	+	.	ID=gene2679;Name=folC;Dbxref=GeneID:1175600;gbkey=Gene;gene=folC;locus_tag=YPO2769
NC_003143.1	RefSeq	CDS	3103256	3104560	.	+	0	ID=cds2559;Name=YP_002347716.1;Parent=gene2679;Dbxref=InterPro:IPR001645,InterPro:IPR004101,InterPro:IPR013221,UniProtKB%2FTrEMBL:Q0WDC2,Genbank:YP_002347716.1,GeneID:1175600;gbkey=CDS;gene=folC;product=bifunctional folylpolyglutamate synthase%2F dihydrofolate synthase;protein_id=YP_002347716.1;transl_table=11
NC_003143.1	RefSeq	region	3103409	3103480	.	+	.	ID=id2018;Note=PS01011 Folylpolyglutamate synthase signature 1.;Dbxref=GeneID:1175600;gbkey=misc_feature;gene=folC
NC_003143.1	RefSeq	region	3103685	3103732	.	+	.	ID=id2019;Note=PS01012 Folylpolyglutamate synthase signature 2.;Dbxref=GeneID:1175600;gbkey=misc_feature;gene=folC
NC_003143.1	RefSeq	gene	3104680	3105402	.	+	.	ID=gene2680;Name=dedD;Dbxref=GeneID:1175601;gbkey=Gene;gene=dedD;locus_tag=YPO2770
NC_003143.1	RefSeq	CDS	3104680	3105402	.	+	0	ID=cds2560;Name=YP_002347717.1;Parent=gene2680;Dbxref=InterPro:IPR007730,UniProtKB%2FTrEMBL:Q0WDC1,Genbank:YP_002347717.1,GeneID:1175601;gbkey=CDS;gene=dedD;product=hypothetical protein;protein_id=YP_002347717.1;transl_table=11
NC_003143.1	RefSeq	region	3104692	3104760	.	+	.	ID=id2020;Note=1 probable transmembrane helix predicted;Dbxref=GeneID:1175601;gbkey=misc_feature;gene=dedD
NC_003143.1	RefSeq	gene	3105714	3106223	.	+	.	ID=gene2681;Name=cvpA;Dbxref=GeneID:1175602;gbkey=Gene;gene=cvpA;gene_synonym=dedE;locus_tag=YPO2771
NC_003143.1	RefSeq	CDS	3105714	3106223	.	+	0	ID=cds2561;Name=YP_002347718.1;Parent=gene2681;Note=membrane protein required for colicin V production;Dbxref=InterPro:IPR003825,UniProtKB%2FTrEMBL:Q7CJA5,Genbank:YP_002347718.1,GeneID:1175602;gbkey=CDS;gene=cvpA;product=colicin V production protein;protein_id=YP_002347718.1;transl_table=11
NC_003143.1	RefSeq	gene	3106236	3107753	.	+	.	ID=gene2682;Name=purF;Dbxref=GeneID:1175603;gbkey=Gene;gene=purF;locus_tag=YPO2772
NC_003143.1	RefSeq	CDS	3106236	3107753	.	+	0	ID=cds2562;Name=YP_002347719.1;Parent=gene2682;Note=Catalyzes first step of the de novo purine nucleotide biosynthetic pathway;Dbxref=InterPro:IPR000583,InterPro:IPR000836,InterPro:IPR002375,InterPro:IPR005854,UniProtKB%2FTrEMBL:Q7CJA4,Genbank:YP_002347719.1,GeneID:1175603;gbkey=CDS;gene=purF;product=amidophosphoribosyltransferase;protein_id=YP_002347719.1;transl_table=11
NC_003143.1	RefSeq	region	3106236	3106253	.	+	.	ID=id2021;Note=PS00443 Glutamine amidotransferases class-II active site.;Dbxref=GeneID:1175603;gbkey=misc_feature;gene=purF
NC_003143.1	RefSeq	region	3107322	3107360	.	+	.	ID=id2022;Note=PS00103 Purine%2Fpyrimidine phosphoribosyl transferases signature.;Dbxref=GeneID:1175603;gbkey=misc_feature;gene=purF
NC_003143.1	RefSeq	gene	3108000	3108572	.	+	.	ID=gene2683;Name=ubiX;Dbxref=GeneID:1175604;gbkey=Gene;gene=ubiX;locus_tag=YPO2773
NC_003143.1	RefSeq	CDS	3108000	3108572	.	+	0	ID=cds2563;Name=YP_002347720.1;Parent=gene2683;Note=catalyzes the formation of 2-octaprenylphenol from 3-octaprenyl-4-hydroxybenzoate;Dbxref=InterPro:IPR003382,InterPro:IPR004507,UniProtKB%2FTrEMBL:Q0WDB8,Genbank:YP_002347720.1,GeneID:1175604;gbkey=CDS;gene=ubiX;product=3-octaprenyl-4-hydroxybenzoate carboxy-lyase;protein_id=YP_002347720.1;transl_table=11
NC_003143.1	RefSeq	gene	3109091	3109879	.	+	.	ID=gene2684;Name=hisJ;Dbxref=GeneID:1175605;gbkey=Gene;gene=hisJ;locus_tag=YPO2774
NC_003143.1	RefSeq	CDS	3109091	3109879	.	+	0	ID=cds2564;Name=YP_002347721.1;Parent=gene2684;Dbxref=InterPro:IPR001638,InterPro:IPR005768,UniProtKB%2FTrEMBL:Q0WDB7,Genbank:YP_002347721.1,GeneID:1175605;gbkey=CDS;gene=hisJ;product=histidine-binding periplasmic protein;protein_id=YP_002347721.1;transl_table=11
NC_003143.1	RefSeq	region	3109244	3109285	.	+	.	ID=id2023;Note=PS01039 Bacterial extracellular solute-binding proteins%2C family 3 signature.;Dbxref=GeneID:1175605;gbkey=misc_feature;gene=hisJ
NC_003143.1	RefSeq	gene	3109982	3110668	.	+	.	ID=gene2685;Name=hisQ;Dbxref=GeneID:1175606;gbkey=Gene;gene=hisQ;locus_tag=YPO2775
NC_003143.1	RefSeq	CDS	3109982	3110668	.	+	0	ID=cds2565;Name=YP_002347722.1;Parent=gene2685;Dbxref=InterPro:IPR000515,InterPro:IPR010065,UniProtKB%2FTrEMBL:Q7CJA3,Genbank:YP_002347722.1,GeneID:1175606;gbkey=CDS;gene=hisQ;product=histidine transport system permease HisQ;protein_id=YP_002347722.1;transl_table=11
NC_003143.1	RefSeq	region	3110327	3110413	.	+	.	ID=id2024;Note=PS00402 Binding-protein-dependent transport systems inner membrane comp. sign.;Dbxref=GeneID:1175606;gbkey=misc_feature;gene=hisQ
NC_003143.1	RefSeq	gene	3110665	3111381	.	+	.	ID=gene2686;Name=hisM;Dbxref=GeneID:1175607;gbkey=Gene;gene=hisM;locus_tag=YPO2776
NC_003143.1	RefSeq	CDS	3110665	3111381	.	+	0	ID=cds2566;Name=YP_002347723.1;Parent=gene2686;Dbxref=InterPro:IPR000515,InterPro:IPR010065,UniProtKB%2FTrEMBL:Q7CJA2,Genbank:YP_002347723.1,GeneID:1175607;gbkey=CDS;gene=hisM;product=histidine transport system permease HisM;protein_id=YP_002347723.1;transl_table=11
NC_003143.1	RefSeq	region	3111037	3111123	.	+	.	ID=id2025;Note=PS00402 Binding-protein-dependent transport systems inner membrane comp. sign.;Dbxref=GeneID:1175607;gbkey=misc_feature;gene=hisM
NC_003143.1	RefSeq	gene	3111395	3112192	.	+	.	ID=gene2687;Name=hisP;Dbxref=GeneID:1175608;gbkey=Gene;gene=hisP;locus_tag=YPO2777
NC_003143.1	RefSeq	CDS	3111395	3112192	.	+	0	ID=cds2567;Name=YP_002347724.1;Parent=gene2687;Dbxref=InterPro:IPR003439,InterPro:IPR003593,UniProtKB%2FTrEMBL:Q7CJA1,Genbank:YP_002347724.1,GeneID:1175608;gbkey=CDS;gene=hisP;product=histidine%2Flysine%2Farginine%2Fornithine transporter subunit;protein_id=YP_002347724.1;transl_table=11
NC_003143.1	RefSeq	region	3111530	3111553	.	+	.	ID=id2026;Note=PS00017 ATP%2FGTP-binding site motif A %28P-loop%29.;Dbxref=GeneID:1175608;gbkey=misc_feature;gene=hisP
NC_003143.1	RefSeq	region	3111875	3111919	.	+	.	ID=id2027;Note=PS00211 ABC transporters family signature.;Dbxref=GeneID:1175608;gbkey=misc_feature;gene=hisP
NC_003143.1	RefSeq	gene	3112316	3113224	.	-	.	ID=gene2688;Name=YPO2778;Dbxref=GeneID:1175609;gbkey=Gene;locus_tag=YPO2778
NC_003143.1	RefSeq	CDS	3112316	3113224	.	-	0	ID=cds2568;Name=YP_002347725.1;Parent=gene2688;Dbxref=InterPro:IPR001509,InterPro:IPR010099,InterPro:IPR013549,UniProtKB%2FTrEMBL:Q0WDB3,Genbank:YP_002347725.1,GeneID:1175609;gbkey=CDS;product=hypothetical protein;protein_id=YP_002347725.1;transl_table=11
NC_003143.1	RefSeq	gene	3113572	3114270	.	+	.	ID=gene2689;Name=YPO2779;Dbxref=GeneID:1175610;gbkey=Gene;locus_tag=YPO2779
NC_003143.1	RefSeq	CDS	3113572	3114270	.	+	0	ID=cds2569;Name=YP_002347726.1;Parent=gene2689;Dbxref=InterPro:IPR001633,UniProtKB%2FTrEMBL:Q7CJA0,Genbank:YP_002347726.1,GeneID:1175610;gbkey=CDS;product=hypothetical protein;protein_id=YP_002347726.1;transl_table=11
NC_003143.1	RefSeq	gene	3114471	3115046	.	+	.	ID=gene2690;Name=YPO2780;Dbxref=GeneID:1175611;gbkey=Gene;locus_tag=YPO2780
NC_003143.1	RefSeq	CDS	3114471	3115046	.	+	0	ID=cds2570;Name=YP_002347727.1;Parent=gene2690;Dbxref=InterPro:IPR000979,InterPro:IPR004843,UniProtKB%2FTrEMBL:Q0WDB1,Genbank:YP_002347727.1,GeneID:1175611;gbkey=CDS;product=phosphodiesterase;protein_id=YP_002347727.1;transl_table=11
NC_003143.1	RefSeq	repeat_region	3114612	3114683	.	+	.	ID=id2028;Note=repeat region containing 2xcctgcagcggtggcggagtctcttaatgcctacaaa repeat;Dbxref=GeneID:1175611;gbkey=repeat_region
NC_003143.1	RefSeq	region	3114852	3114926	.	+	.	ID=id2029;Note=PS01269 Uncharacterized protein family UPF0025 signature.;Dbxref=GeneID:1175611;gbkey=misc_feature
NC_003143.1	RefSeq	gene	3115268	3115816	.	+	.	ID=gene2691;Name=YPO2781;Dbxref=GeneID:1175612;gbkey=Gene;locus_tag=YPO2781
NC_003143.1	RefSeq	CDS	3115268	3115816	.	+	0	ID=cds2571;Name=YP_002347728.1;Parent=gene2691;Dbxref=InterPro:IPR000086,InterPro:IPR002667,UniProtKB%2FTrEMBL:Q0WDB0,Genbank:YP_002347728.1,GeneID:1175612;gbkey=CDS;product=hypothetical protein;protein_id=YP_002347728.1;transl_table=11
NC_003143.1	RefSeq	gene	3115933	3117189	.	-	.	ID=gene2692;Name=ulaA;Dbxref=GeneID:1175613;gbkey=Gene;gene=ulaA;locus_tag=YPO2782
NC_003143.1	RefSeq	CDS	3115933	3117189	.	-	0	ID=cds2572;Name=YP_002347729.1;Parent=gene2692;Note=membrane component%3B functions with enzymes IIB %28sgaB%3B ulaB%29 and IIA %28sgaA%3B ulaC%29 enzyme I and HPr for anaerobic utilization and uptake of L-ascorbate%3B sgaTBA are regulated by yifQ as well as Crp and Fnr;Dbxref=InterPro:IPR007333,UniProtKB%2FTrEMBL:Q7CJ99,Genbank:YP_002347729.1,GeneID:1175613;gbkey=CDS;gene=ulaA;product=PTS system ascorbate-specific transporter subunit IIC;protein_id=YP_002347729.1;transl_table=11
NC_003143.1	RefSeq	repeat_region	3117258	3118572	.	+	.	ID=id2030;Note=insertion sequence:IS285;gbkey=repeat_region
NC_003143.1	RefSeq	repeat_region	3117258	3117286	.	+	.	ID=id2031;Note=IS285 inverted repeat;gbkey=repeat_region
NC_003143.1	RefSeq	gene	3117329	3118537	.	+	.	ID=gene2693;Name=y1062;Dbxref=GeneID:1175614;gbkey=Gene;gene=y1062;gene_synonym=ypmt1.80C;locus_tag=YPO2783
NC_003143.1	RefSeq	CDS	3117329	3118537	.	+	0	ID=cds2573;Name=YP_002347730.1;Parent=gene2693;Dbxref=InterPro:IPR001207,UniProtKB%2FTrEMBL:Q7ARB0,Genbank:YP_002347730.1,GeneID:1175614;gbkey=CDS;gene=y1062;product=transposase for the IS285 insertion element;protein_id=YP_002347730.1;transl_table=11
NC_003143.1	RefSeq	region	3118022	3118096	.	+	.	ID=id2032;Note=PS01007 Transposases%2C Mutator family%2C signature.;Dbxref=GeneID:1175614;gbkey=misc_feature;gene=y1062
NC_003143.1	RefSeq	repeat_region	3118544	3118572	.	-	.	ID=id2033;Note=IS285 inverted repeat;gbkey=repeat_region
NC_003143.1	RefSeq	gene	3118574	3120100	.	+	.	ID=gene2694;Name=pbpC;Dbxref=GeneID:1175615;gbkey=Gene;gene=pbpC;locus_tag=YPO2784;pseudo=true
NC_003143.1	RefSeq	region	3118574	3120100	.	+	.	ID=id2034;Note=Similar to Escherichia coli penicillin-binding protein 1C PbpC TR:P76988 %28EMBL:U88571%29 %28650 aa%29 fasta scores: E%28%29: 0%2C 30.6%25 id in 509 aa%2C and to Xylella fastidiosa bifunctional penicillin binding protein 1C XF2235 TR:Q9PBA9 %28EMBL:AE004036%29 %28796 aa%29 fasta scores: E%28%29: 0%2C 30.3%25 id in 525 aa. Truncation of the CDS due to the insertion of IS235 upstream.;Dbxref=GeneID:1175615;gbkey=misc_feature;gene=pbpC;pseudo=true
NC_003143.1	RefSeq	gene	3120316	3120561	.	-	.	ID=gene2695;Name=nlp;Dbxref=GeneID:1175616;gbkey=Gene;gene=nlp;gene_synonym=sfs7,sfsB;locus_tag=YPO2785
NC_003143.1	RefSeq	CDS	3120316	3120561	.	-	0	ID=cds2574;Name=YP_002347731.1;Parent=gene2695;Dbxref=InterPro:IPR010982,UniProtKB%2FTrEMBL:Q0WDA7,Genbank:YP_002347731.1,GeneID:1175616;gbkey=CDS;gene=nlp;product=DNA-binding protein;protein_id=YP_002347731.1;transl_table=11
NC_003143.1	RefSeq	gene	3121234	3121815	.	+	.	ID=gene2696;Name=YPO2788;Dbxref=GeneID:1175617;gbkey=Gene;locus_tag=YPO2788;pseudo=true
NC_003143.1	RefSeq	gene	3122083	3122484	.	+	.	ID=gene2697;Name=YPO2790;Dbxref=GeneID:1175618;gbkey=Gene;locus_tag=YPO2790
NC_003143.1	RefSeq	CDS	3122083	3122484	.	+	0	ID=cds2575;Name=YP_002347733.1;Parent=gene2697;Dbxref=InterPro:IPR010665,UniProtKB%2FTrEMBL:Q0WDA5,Genbank:YP_002347733.1,GeneID:1175618;gbkey=CDS;product=hypothetical protein;protein_id=YP_002347733.1;transl_table=11
NC_003143.1	RefSeq	gene	3122738	3123118	.	+	.	ID=gene2698;Name=YPO2792;Dbxref=GeneID:1175619;gbkey=Gene;locus_tag=YPO2792
NC_003143.1	RefSeq	CDS	3122738	3123118	.	+	0	ID=cds2576;Name=YP_002347734.1;Parent=gene2698;Dbxref=InterPro:IPR010665,UniProtKB%2FTrEMBL:Q0WDA4,Genbank:YP_002347734.1,GeneID:1175619;gbkey=CDS;product=hypothetical protein;protein_id=YP_002347734.1;transl_table=11
NC_003143.1	RefSeq	gene	3123130	3123702	.	-	.	ID=gene2699;Name=YPO2793;Dbxref=GeneID:1175620;gbkey=Gene;locus_tag=YPO2793
NC_003143.1	RefSeq	CDS	3123130	3123702	.	-	0	ID=cds2577;Name=YP_002347735.1;Parent=gene2699;Dbxref=InterPro:IPR008514,UniProtKB%2FTrEMBL:Q7CJX0,Genbank:YP_002347735.1,GeneID:1175620;gbkey=CDS;product=hypothetical protein;protein_id=YP_002347735.1;transl_table=11
NC_003143.1	RefSeq	region	3123154	3123219	.	-	.	ID=id2035;Note=1 probable transmembrane helix predicted;Dbxref=GeneID:1175620;gbkey=misc_feature
NC_003143.1	RefSeq	gene	3123726	3123977	.	-	.	ID=gene2700;Name=YPO2794;Dbxref=GeneID:1175621;gbkey=Gene;locus_tag=YPO2794
NC_003143.1	RefSeq	CDS	3123726	3123977	.	-	0	ID=cds2578;Name=YP_002347736.1;Parent=gene2700;Note=no significant database hits;Dbxref=UniProtKB%2FTrEMBL:Q7CJX1,Genbank:YP_002347736.1,GeneID:1175621;gbkey=CDS;product=hypothetical protein;protein_id=YP_002347736.1;transl_table=11
NC_003143.1	RefSeq	gene	3124016	3124255	.	-	.	ID=gene2701;Name=YPO2795;Dbxref=GeneID:1175622;gbkey=Gene;locus_tag=YPO2795
NC_003143.1	RefSeq	CDS	3124016	3124255	.	-	0	ID=cds2579;Name=YP_002347737.1;Parent=gene2701;Dbxref=UniProtKB%2FTrEMBL:Q74VW9,Genbank:YP_002347737.1,GeneID:1175622;gbkey=CDS;product=hypothetical protein;protein_id=YP_002347737.1;transl_table=11
NC_003143.1	RefSeq	gene	3125064	3126980	.	+	.	ID=gene2702;Name=yapC;Dbxref=GeneID:1175623;gbkey=Gene;gene=yapC;locus_tag=YPO2796
NC_003143.1	RefSeq	CDS	3125064	3126980	.	+	0	ID=cds2580;Name=YP_002347738.1;Parent=gene2702;Dbxref=InterPro:IPR003991,InterPro:IPR004899,InterPro:IPR005546,InterPro:IPR006315,InterPro:IPR011050,UniProtKB%2FTrEMBL:Q9F290,Genbank:YP_002347738.1,GeneID:1175623;gbkey=CDS;gene=yapC;product=autotransporter protein;protein_id=YP_002347738.1;transl_table=11
NC_003143.1	RefSeq	region	3125076	3125135	.	+	.	ID=id2036;Note=1 probable transmembrane helix predicted;Dbxref=GeneID:1175623;gbkey=misc_feature;gene=yapC
NC_003143.1	RefSeq	gene	3127515	3128096	.	+	.	ID=gene2703;Name=YPO2797;Dbxref=GeneID:1175624;gbkey=Gene;locus_tag=YPO2797
NC_003143.1	RefSeq	CDS	3127515	3128096	.	+	0	ID=cds2581;Name=YP_002347739.1;Parent=gene2703;Note=no significant database hits;Dbxref=UniProtKB%2FTrEMBL:Q74VW7,Genbank:YP_002347739.1,GeneID:1175624;gbkey=CDS;product=hypothetical protein;protein_id=YP_002347739.1;transl_table=11
NC_003143.1	RefSeq	repeat_region	3128463	3129777	.	-	.	ID=id2037;Note=insertion sequence:IS285;gbkey=repeat_region
NC_003143.1	RefSeq	repeat_region	3128463	3128491	.	+	.	ID=id2038;Note=IS285 inverted repeat;gbkey=repeat_region
NC_003143.1	RefSeq	gene	3128498	3129706	.	-	.	ID=gene2704;Name=y1062;Dbxref=GeneID:1175626;gbkey=Gene;gene=y1062;gene_synonym=ypmt1.80C;locus_tag=YPO2799
NC_003143.1	RefSeq	CDS	3128498	3129706	.	-	0	ID=cds2582;Name=YP_002347741.1;Parent=gene2704;Dbxref=InterPro:IPR001207,UniProtKB%2FTrEMBL:Q7ARB0,Genbank:YP_002347741.1,GeneID:1175626;gbkey=CDS;gene=y1062;product=transposase for the IS285 insertion element;protein_id=YP_002347741.1;transl_table=11
NC_003143.1	RefSeq	region	3128939	3129013	.	-	.	ID=id2039;Note=PS01007 Transposases%2C Mutator family%2C signature.;Dbxref=GeneID:1175626;gbkey=misc_feature;gene=y1062
NC_003143.1	RefSeq	repeat_region	3129749	3129777	.	-	.	ID=id2040;Note=IS285 inverted repeat;gbkey=repeat_region
NC_003143.1	RefSeq	gene	3130158	3132365	.	+	.	ID=gene2705;Name=YPO2801;Dbxref=GeneID:1175627;gbkey=Gene;locus_tag=YPO2801
NC_003143.1	RefSeq	CDS	3130158	3132365	.	+	0	ID=cds2583;Name=YP_002347742.1;Parent=gene2705;Dbxref=UniProtKB%2FTrEMBL:Q7CJX4,Genbank:YP_002347742.1,GeneID:1175627;gbkey=CDS;product=hypothetical protein;protein_id=YP_002347742.1;transl_table=11
NC_003143.1	RefSeq	gene	3132358	3132888	.	+	.	ID=gene2706;Name=YPO2802;Dbxref=GeneID:1175628;gbkey=Gene;locus_tag=YPO2802
NC_003143.1	RefSeq	CDS	3132358	3132888	.	+	0	ID=cds2584;Name=YP_002347743.1;Parent=gene2706;Dbxref=UniProtKB%2FTrEMBL:Q7CJX5,Genbank:YP_002347743.1,GeneID:1175628;gbkey=CDS;product=hypothetical protein;protein_id=YP_002347743.1;transl_table=11
NC_003143.1	RefSeq	region	3132376	3132429	.	+	.	ID=id2041;Note=1 probable transmembrane helix predicted;Dbxref=GeneID:1175628;gbkey=misc_feature
NC_003143.1	RefSeq	gene	3133047	3135428	.	+	.	ID=gene2707;Name=bglB;Dbxref=GeneID:1175629;gbkey=Gene;gene=bglB;locus_tag=YPO2803
NC_003143.1	RefSeq	CDS	3133047	3135428	.	+	0	ID=cds2585;Name=YP_002347744.1;Parent=gene2707;Dbxref=InterPro:IPR001764,InterPro:IPR002772,UniProtKB%2FTrEMBL:Q7CJX6,Genbank:YP_002347744.1,GeneID:1175629;gbkey=CDS;gene=bglB;product=beta-glucosidase;protein_id=YP_002347744.1;transl_table=11
NC_003143.1	RefSeq	region	3133791	3133844	.	+	.	ID=id2042;Note=PS00775 Glycosyl hydrolases family 3 active site.;Dbxref=GeneID:1175629;gbkey=misc_feature;gene=bglB
NC_003143.1	RefSeq	gene	3135507	3137135	.	-	.	ID=gene2708;Name=YPO2804;Dbxref=GeneID:1175630;gbkey=Gene;locus_tag=YPO2804
NC_003143.1	RefSeq	CDS	3135507	3137135	.	-	0	ID=cds2586;Name=YP_002347745.1;Parent=gene2708;Note=no significant database hits;Dbxref=UniProtKB%2FTrEMBL:Q7CJX7,Genbank:YP_002347745.1,GeneID:1175630;gbkey=CDS;product=hypothetical protein;protein_id=YP_002347745.1;transl_table=11
NC_003143.1	RefSeq	gene	3137566	3138459	.	+	.	ID=gene2709;Name=YPO2805;Dbxref=GeneID:1175631;gbkey=Gene;locus_tag=YPO2805
NC_003143.1	RefSeq	CDS	3137566	3138459	.	+	0	ID=cds2587;Name=YP_002347746.1;Parent=gene2709;Dbxref=InterPro:IPR001395,UniProtKB%2FTrEMBL:Q7CJX8,Genbank:YP_002347746.1,GeneID:1175631;gbkey=CDS;product=aldo%2Fketo reductase;protein_id=YP_002347746.1;transl_table=11
NC_003143.1	RefSeq	region	3137722	3137775	.	+	.	ID=id2043;Note=PS00798 Aldo%2Fketo reductase family signature 1.;Dbxref=GeneID:1175631;gbkey=misc_feature
NC_003143.1	RefSeq	region	3137965	3138018	.	+	.	ID=id2044;Note=PS00062 Aldo%2Fketo reductase family signature 2.;Dbxref=GeneID:1175631;gbkey=misc_feature
NC_003143.1	RefSeq	region	3138283	3138330	.	+	.	ID=id2045;Note=PS00063 Aldo%2Fketo reductase family  active site signature.;Dbxref=GeneID:1175631;gbkey=misc_feature
NC_003143.1	RefSeq	gene	3138485	3139474	.	+	.	ID=gene2710;Name=YPO2806;Dbxref=GeneID:1175632;gbkey=Gene;locus_tag=YPO2806
NC_003143.1	RefSeq	CDS	3138485	3139474	.	+	0	ID=cds2588;Name=YP_002347747.1;Parent=gene2710;Dbxref=InterPro:IPR001395,UniProtKB%2FTrEMBL:Q0WD91,Genbank:YP_002347747.1,GeneID:1175632;gbkey=CDS;product=aldo%2Fketo reductase;protein_id=YP_002347747.1;transl_table=11
NC_003143.1	RefSeq	gene	3139529	3140422	.	-	.	ID=gene2711;Name=ptxR;Dbxref=GeneID:1175633;gbkey=Gene;gene=ptxR;locus_tag=YPO2807
NC_003143.1	RefSeq	CDS	3139529	3140422	.	-	0	ID=cds2589;Name=YP_002347748.1;Parent=gene2711;Dbxref=InterPro:IPR000847,InterPro:IPR005119,InterPro:IPR011991,UniProtKB%2FTrEMBL:Q7CJX9,Genbank:YP_002347748.1,GeneID:1175633;gbkey=CDS;gene=ptxR;product=LysR family transcriptional regulator;protein_id=YP_002347748.1;transl_table=11
NC_003143.1	RefSeq	region	3140273	3140365	.	-	.	ID=id2046;Note=PS00044 Bacterial regulatory proteins%2C lysR family signature.;Dbxref=GeneID:1175633;gbkey=misc_feature;gene=ptxR
NC_003143.1	RefSeq	region	3140303	3140368	.	-	.	ID=id2047;Note=Predicted helix-turn-helix motif with score 2110 %28%2B6.37 SD%29 at aa 19-40%2C sequence RSFTKAAGKLGVSQSALSHAIK;Dbxref=GeneID:1175633;gbkey=misc_feature;gene=ptxR
NC_003143.1	RefSeq	repeat_region	3140430	3142383	.	+	.	ID=id2048;Note=insertion sequence:IS100;gbkey=repeat_region
NC_003143.1	RefSeq	repeat_region	3140430	3140457	.	+	.	ID=id2049;Note=IS100 inverted repeat;gbkey=repeat_region
NC_003143.1	RefSeq	gene	3140516	3141538	.	+	.	ID=gene2712;Name=y1093;Dbxref=GeneID:1175634;gbkey=Gene;gene=y1093;gene_synonym=ypmt1;locus_tag=YPO2808
NC_003143.1	RefSeq	CDS	3140516	3141538	.	+	0	ID=cds2590;Name=YP_002347749.1;Parent=gene2712;Dbxref=InterPro:IPR001584,InterPro:IPR006120,InterPro:IPR009057,InterPro:IPR012287,InterPro:IPR012337,UniProtKB%2FTrEMBL:Q7ARN5,Genbank:YP_002347749.1,GeneID:1175634;gbkey=CDS;gene=y1093;product=transposase for insertion sequence IS100;protein_id=YP_002347749.1;transl_table=11
NC_003143.1	RefSeq	region	3140567	3140632	.	+	.	ID=id2050;Note=Predicted helix-turn-helix motif with score 2147 %28%2B6.50 SD%29 at aa 18-39%2C sequence MSSRAIARELGISRNTVKRYLQ;Dbxref=GeneID:1175634;gbkey=misc_feature;gene=y1093
NC_003143.1	RefSeq	gene	3141535	3142317	.	+	.	ID=gene2713;Name=YPO2809;Note=ypmt1.57c;Dbxref=GeneID:1175635;gbkey=Gene;locus_tag=YPO2809
NC_003143.1	RefSeq	CDS	3141535	3142317	.	+	0	ID=cds2591;Name=YP_002347750.1;Parent=gene2713;Dbxref=InterPro:IPR001270,InterPro:IPR002611,InterPro:IPR003593,UniProtKB%2FTrEMBL:Q7ARK4,Genbank:YP_002347750.1,GeneID:1175635;gbkey=CDS;product=transposase%2FIS protein;protein_id=YP_002347750.1;transl_table=11
NC_003143.1	RefSeq	region	3141862	3141885	.	+	.	ID=id2051;Note=PS00017 ATP%2FGTP-binding site motif A %28P-loop%29.;Dbxref=GeneID:1175635;gbkey=misc_feature
NC_003143.1	RefSeq	repeat_region	3142356	3142383	.	-	.	ID=id2052;Note=IS100 inverted repeat;gbkey=repeat_region
NC_003143.1	RefSeq	gene	3142684	3142989	.	-	.	ID=gene2714;Name=YPO2811;Dbxref=GeneID:1175636;gbkey=Gene;locus_tag=YPO2811
NC_003143.1	RefSeq	CDS	3142684	3142989	.	-	0	ID=cds2592;Name=YP_002347751.1;Parent=gene2714;Dbxref=UniProtKB%2FTrEMBL:Q74WJ6,Genbank:YP_002347751.1,GeneID:1175636;gbkey=CDS;product=hypothetical protein;protein_id=YP_002347751.1;transl_table=11
NC_003143.1	RefSeq	region	3142888	3142938	.	-	.	ID=id2053;Note=1 probable transmembrane helix predicted;Dbxref=GeneID:1175636;gbkey=misc_feature
NC_003143.1	RefSeq	gene	3143086	3143457	.	-	.	ID=gene2715;Name=YPO2812;Dbxref=GeneID:1175637;gbkey=Gene;locus_tag=YPO2812
NC_003143.1	RefSeq	CDS	3143086	3143457	.	-	0	ID=cds2593;Name=YP_002347752.1;Parent=gene2715;Note=Doubtful CDS%2C no significant database matches;Dbxref=UniProtKB%2FTrEMBL:Q0WD86,Genbank:YP_002347752.1,GeneID:1175637;gbkey=CDS;product=hypothetical protein;protein_id=YP_002347752.1;transl_table=11
NC_003143.1	RefSeq	gene	3143469	3144788	.	-	.	ID=gene2716;Name=ynbD;Dbxref=GeneID:1175638;gbkey=Gene;gene=ynbD;locus_tag=YPO2813
NC_003143.1	RefSeq	CDS	3143469	3144788	.	-	0	ID=cds2594;Name=YP_002347753.1;Parent=gene2716;Dbxref=InterPro:IPR000326,InterPro:IPR000340,InterPro:IPR000387,InterPro:IPR000402,UniProtKB%2FTrEMBL:Q7CJY2,Genbank:YP_002347753.1,GeneID:1175638;gbkey=CDS;gene=ynbD;product=dual specificity phosphatase;protein_id=YP_002347753.1;transl_table=11
NC_003143.1	RefSeq	region	3144480	3144527	.	-	.	ID=id2054;Note=PS00391 Sodium and potassium ATPases beta subunits signature 2.;Dbxref=GeneID:1175638;gbkey=misc_feature;gene=ynbD
NC_003143.1	RefSeq	gene	3144781	3146544	.	-	.	ID=gene2717;Name=ynbD;Dbxref=GeneID:1175639;gbkey=Gene;gene=ynbD;locus_tag=YPO2814
NC_003143.1	RefSeq	CDS	3144781	3146544	.	-	0	ID=cds2595;Name=YP_002347754.1;Parent=gene2717;Dbxref=InterPro:IPR000073,UniProtKB%2FTrEMBL:Q0WD84,Genbank:YP_002347754.1,GeneID:1175639;gbkey=CDS;product=hypothetical protein;protein_id=YP_002347754.1;transl_table=11
NC_003143.1	RefSeq	gene	3146541	3147173	.	-	.	ID=gene2718;Name=YPO2815;Dbxref=GeneID:1175640;gbkey=Gene;locus_tag=YPO2815
NC_003143.1	RefSeq	CDS	3146541	3147173	.	-	0	ID=cds2596;Name=YP_002347755.1;Parent=gene2718;Dbxref=InterPro:IPR002123,UniProtKB%2FTrEMBL:Q7CJY3,Genbank:YP_002347755.1,GeneID:1175640;gbkey=CDS;product=acyltransferase;protein_id=YP_002347755.1;transl_table=11
NC_003143.1	RefSeq	region	3147102	3147152	.	-	.	ID=id2055;Note=1 probable transmembrane helix predicted;Dbxref=GeneID:1175640;gbkey=misc_feature
NC_003143.1	RefSeq	gene	3147183	3148112	.	-	.	ID=gene2719;Name=ynbB;Dbxref=GeneID:1175641;gbkey=Gene;gene=ynbB;locus_tag=YPO2816
NC_003143.1	RefSeq	CDS	3147183	3148112	.	-	0	ID=cds2597;Name=YP_002347756.1;Parent=gene2719;Dbxref=InterPro:IPR000374,UniProtKB%2FTrEMBL:Q7CJY4,Genbank:YP_002347756.1,GeneID:1175641;gbkey=CDS;gene=ynbB;product=phosphatidate cytidylyltransferase;protein_id=YP_002347756.1;transl_table=11
NC_003143.1	RefSeq	region	3147240	3147320	.	-	.	ID=id2056;Note=PS01315 Phosphatidate cytidylyltransferase signature.;Dbxref=GeneID:1175641;gbkey=misc_feature;gene=ynbB
NC_003143.1	RefSeq	gene	3148105	3148707	.	-	.	ID=gene2720;Name=ynbB;Dbxref=GeneID:1175642;gbkey=Gene;gene=ynbB;locus_tag=YPO2817
NC_003143.1	RefSeq	CDS	3148105	3148707	.	-	0	ID=cds2598;Name=YP_002347757.1;Parent=gene2720;Dbxref=InterPro:IPR000462,UniProtKB%2FTrEMBL:Q7CJY5,Genbank:YP_002347757.1,GeneID:1175642;gbkey=CDS;product=CDP-alcohol phosphatidyltransferase;protein_id=YP_002347757.1;transl_table=11
NC_003143.1	RefSeq	gene	3149886	3150224	.	+	.	ID=gene2721;Name=YPO2820;Dbxref=GeneID:1175645;gbkey=Gene;locus_tag=YPO2820
NC_003143.1	RefSeq	CDS	3149886	3150224	.	+	0	ID=cds2599;Name=YP_002347760.1;Parent=gene2721;Note=no significant database hits;Dbxref=UniProtKB%2FTrEMBL:Q74WK5,Genbank:YP_002347760.1,GeneID:1175645;gbkey=CDS;product=hypothetical protein;protein_id=YP_002347760.1;transl_table=11
NC_003143.1	RefSeq	gene	3150209	3150857	.	+	.	ID=gene2722;Name=YPO2821;Dbxref=GeneID:1175646;gbkey=Gene;locus_tag=YPO2821;pseudo=true
NC_003143.1	RefSeq	gene	3150971	3151171	.	+	.	ID=gene2723;Name=YPO2822;Dbxref=GeneID:1175647;gbkey=Gene;locus_tag=YPO2822
NC_003143.1	RefSeq	CDS	3150971	3151171	.	+	0	ID=cds2600;Name=YP_002347762.1;Parent=gene2723;Note=no significant database hits;Dbxref=UniProtKB%2FTrEMBL:Q74WK7,Genbank:YP_002347762.1,GeneID:1175647;gbkey=CDS;product=hypothetical protein;protein_id=YP_002347762.1;transl_table=11
NC_003143.1	RefSeq	gene	3151430	3151612	.	+	.	ID=gene2724;Name=YPO2823;Dbxref=GeneID:1175648;gbkey=Gene;locus_tag=YPO2823
NC_003143.1	RefSeq	CDS	3151430	3151612	.	+	0	ID=cds2601;Name=YP_002347763.1;Parent=gene2724;Dbxref=UniProtKB%2FTrEMBL:Q74WK8,Genbank:YP_002347763.1,GeneID:1175648;gbkey=CDS;product=regulatory protein;protein_id=YP_002347763.1;transl_table=11
NC_003143.1	RefSeq	gene	3151676	3151752	.	-	.	ID=gene2725;Name=YPt_38;Dbxref=GeneID:1175649;gbkey=Gene;locus_tag=YPt_38
NC_003143.1	RefSeq	tRNA	3151676	3151752	.	-	.	ID=rna53;Parent=gene2725;Note=tRNA Arg anticodon TCT%2C Cove score 94.70;Dbxref=GeneID:1175649;gbkey=tRNA;product=tRNA-Arg
NC_003143.1	RefSeq	exon	3151676	3151752	.	-	.	ID=id2057;Parent=rna53;Note=tRNA Arg anticodon TCT%2C Cove score 94.70;Dbxref=GeneID:1175649;gbkey=tRNA;product=tRNA-Arg
NC_003143.1	RefSeq	gene	3151967	3152833	.	+	.	ID=gene2726;Name=folD;Dbxref=GeneID:1175650;gbkey=Gene;gene=folD;locus_tag=YPO2824
NC_003143.1	RefSeq	CDS	3151967	3152833	.	+	0	ID=cds2602;Name=YP_002347764.1;Parent=gene2726;Note=catalyzes the formation of 5%2C10-methenyltetrahydrofolate from 5%2C10-methylenetetrahydrofolate and subsequent formation of 10-formyltetrahydrofolate from 5%2C10-methenyltetrahydrofolate;Dbxref=InterPro:IPR000672,UniProtKB%2FTrEMBL:Q7CJY7,Genbank:YP_002347764.1,GeneID:1175650;gbkey=CDS;gene=folD;product=bifunctional 5%2C10-methylene-tetrahydrofolate dehydrogenase%2F 5%2C10-methylene-tetrahydrofolate cyclohydrolase;protein_id=YP_002347764.1;transl_table=11
NC_003143.1	RefSeq	region	3151973	3151996	.	+	.	ID=id2058;Note=PS00017 ATP%2FGTP-binding site motif A %28P-loop%29.;Dbxref=GeneID:1175650;gbkey=misc_feature;gene=folD
NC_003143.1	RefSeq	region	3152192	3152269	.	+	.	ID=id2059;Note=PS00766 Tetrahydrofolate dehydrogenase%2Fcyclohydrolase signature 1.;Dbxref=GeneID:1175650;gbkey=misc_feature;gene=folD
NC_003143.1	RefSeq	region	3152744	3152770	.	+	.	ID=id2060;Note=PS00767 Tetrahydrofolate dehydrogenase%2Fcyclohydrolase signature 2.;Dbxref=GeneID:1175650;gbkey=misc_feature;gene=folD
NC_003143.1	RefSeq	region	3152771	3152803	.	+	.	ID=id2061;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site.;Dbxref=GeneID:1175650;gbkey=misc_feature;gene=folD
NC_003143.1	RefSeq	gene	3152848	3153060	.	+	.	ID=gene2727;Name=YPO2825;Dbxref=GeneID:1175651;gbkey=Gene;locus_tag=YPO2825
NC_003143.1	RefSeq	CDS	3152848	3153060	.	+	0	ID=cds2603;Name=YP_002347765.1;Parent=gene2727;Dbxref=InterPro:IPR002942,UniProtKB%2FTrEMBL:Q7CJY8,Genbank:YP_002347765.1,GeneID:1175651;gbkey=CDS;product=hypothetical protein;protein_id=YP_002347765.1;transl_table=11
NC_003143.1	RefSeq	repeat_region	3153099	3153810	.	-	.	ID=id2062;Note=Contains a %27G%27 at nucleotide position 315%7EIS200-like insertion sequence:IS1541;gbkey=repeat_region
NC_003143.1	RefSeq	gene	3153207	3153665	.	-	.	ID=gene2728;Name=tnp;Dbxref=GeneID:1175652;gbkey=Gene;gene=tnp;locus_tag=YPO2826
NC_003143.1	RefSeq	CDS	3153207	3153665	.	-	0	ID=cds2604;Name=YP_002347766.1;Parent=gene2728;Dbxref=InterPro:IPR002686,UniProtKB%2FTrEMBL:Q74YM6,Genbank:YP_002347766.1,GeneID:1175652;gbkey=CDS;gene=tnp;product=transposase for the IS1541 insertion element;protein_id=YP_002347766.1;transl_table=11
NC_003143.1	RefSeq	gene	3153841	3154467	.	-	.	ID=gene2729;Name=upp;Dbxref=GeneID:1175653;gbkey=Gene;gene=upp;gene_synonym=uraP;locus_tag=YPO2827
NC_003143.1	RefSeq	CDS	3153841	3154467	.	-	0	ID=cds2605;Name=YP_002347767.1;Parent=gene2729;Note=Catalyzes the formation of uracil and 5-phospho-alpha-D-ribosy 1-diphosphate from UMP and diphosphate;Dbxref=InterPro:IPR000836,InterPro:IPR005765,UniProtKB%2FTrEMBL:Q0WD71,Genbank:YP_002347767.1,GeneID:1175653;gbkey=CDS;gene=upp;product=uracil phosphoribosyltransferase;protein_id=YP_002347767.1;transl_table=11
NC_003143.1	RefSeq	gene	3154864	3155907	.	+	.	ID=gene2730;Name=purI;Dbxref=GeneID:1175654;gbkey=Gene;gene=purI;gene_synonym=purM;locus_tag=YPO2828
NC_003143.1	RefSeq	CDS	3154864	3155907	.	+	0	ID=cds2606;Name=YP_002347768.1;Parent=gene2730;Note=catalyzes the formation of 1-%285-phosphoribosyl%29-5-aminoimidazole from 2-%28formamido%29-N1-%285-phosphoribosyl%29acetamidine and ATP in purine biosynthesis;Dbxref=InterPro:IPR000728,InterPro:IPR004733,InterPro:IPR010918,UniProtKB%2FTrEMBL:Q0WD70,Genbank:YP_002347768.1,GeneID:1175654;gbkey=CDS;gene=purI;product=phosphoribosylaminoimidazole synthetase;protein_id=YP_002347768.1;transl_table=11
NC_003143.1	RefSeq	gene	3156022	3156660	.	+	.	ID=gene2731;Name=purN;Dbxref=GeneID:1175655;gbkey=Gene;gene=purN;locus_tag=YPO2829
NC_003143.1	RefSeq	CDS	3156022	3156660	.	+	0	ID=cds2607;Name=YP_002347769.1;Parent=gene2731;Note=glycinamide ribonucleotide transformylase%3B GAR Tfase%3B catalyzes the synthesis of 5%27-phosphoribosylformylglycinamide from 5%27-phosphoribosylglycinamide and 10-formyltetrahydrofolate%3B PurN requires formyl folate for the reaction unlike PurT which uses formate;Dbxref=InterPro:IPR001555,InterPro:IPR002376,InterPro:IPR004607,UniProtKB%2FTrEMBL:Q7CJJ9,Genbank:YP_002347769.1,GeneID:1175655;gbkey=CDS;gene=purN;product=phosphoribosylglycinamide formyltransferase;protein_id=YP_002347769.1;transl_table=11
NC_003143.1	RefSeq	region	3156421	3156492	.	+	.	ID=id2063;Note=PS00373 Phosphoribosylglycinamide formyltransferase active site.;Dbxref=GeneID:1175655;gbkey=misc_feature;gene=purN
NC_003143.1	RefSeq	gene	3156889	3157434	.	+	.	ID=gene2732;Name=speG;Dbxref=GeneID:1175656;gbkey=Gene;gene=speG;locus_tag=YPO2830
NC_003143.1	RefSeq	CDS	3156889	3157434	.	+	0	ID=cds2608;Name=YP_002347770.1;Parent=gene2732;Dbxref=InterPro:IPR000182,UniProtKB%2FTrEMBL:Q7CJK0,Genbank:YP_002347770.1,GeneID:1175656;gbkey=CDS;gene=speG;product=spermidine acetyltransferase;protein_id=YP_002347770.1;transl_table=11
NC_003143.1	RefSeq	gene	3157531	3158717	.	-	.	ID=gene2733;Name=fliB;Dbxref=GeneID:1175657;gbkey=Gene;gene=fliB;gene_synonym=nml;locus_tag=YPO2831;pseudo=true
NC_003143.1	RefSeq	gene	3158945	3159757	.	-	.	ID=gene2734;Name=pstb;Dbxref=GeneID:1175658;gbkey=Gene;gene=pstb;locus_tag=YPO2833
NC_003143.1	RefSeq	CDS	3158945	3159757	.	-	0	ID=cds2609;Name=YP_002347771.1;Parent=gene2734;Note=ATP-binding protein%3B PstABCS is an ATP dependent phosphate uptake system which is responsible for inorganic phosphate uptake during phosphate starvation;Dbxref=InterPro:IPR003439,InterPro:IPR003593,InterPro:IPR005670,UniProtKB%2FTrEMBL:Q0WD67,Genbank:YP_002347771.1,GeneID:1175658;gbkey=CDS;gene=pstb;product=phosphate transporter ATP-binding protein;protein_id=YP_002347771.1;transl_table=11
NC_003143.1	RefSeq	region	3159215	3159259	.	-	.	ID=id2064;Note=PS00211 ABC transporters family signature.;Dbxref=GeneID:1175658;gbkey=misc_feature;gene=pstb
NC_003143.1	RefSeq	region	3159569	3159592	.	-	.	ID=id2065;Note=PS00017 ATP%2FGTP-binding site motif A %28P-loop%29.;Dbxref=GeneID:1175658;gbkey=misc_feature;gene=pstb
NC_003143.1	RefSeq	region	3159662	3159691	.	-	.	ID=id2066;Note=PS00339 Aminoacyl-transfer RNA synthetases class-II signature 2.;Dbxref=GeneID:1175658;gbkey=misc_feature;gene=pstb
NC_003143.1	RefSeq	gene	3159785	3161497	.	-	.	ID=gene2735;Name=pstA;Dbxref=GeneID:1175659;gbkey=Gene;gene=pstA;locus_tag=YPO2834
NC_003143.1	RefSeq	CDS	3159785	3161497	.	-	0	ID=cds2610;Name=YP_002347772.1;Parent=gene2735;Dbxref=InterPro:IPR000515,InterPro:IPR005672,Genbank:YP_002347772.1,GeneID:1175659;gbkey=CDS;gene=pstA;product=phosphate transporter permease;protein_id=YP_002347772.1;transl_table=11
NC_003143.1	RefSeq	region	3160115	3160201	.	-	.	ID=id2067;Note=PS00402 Binding-protein-dependent transport systems inner membrane comp. sign.;Dbxref=GeneID:1175659;gbkey=misc_feature;gene=pstA
NC_003143.1	RefSeq	gene	3161497	3163746	.	-	.	ID=gene2736;Name=pstC;Dbxref=GeneID:1175660;gbkey=Gene;gene=pstC;locus_tag=YPO2835
NC_003143.1	RefSeq	CDS	3161497	3163746	.	-	0	ID=cds2611;Name=YP_002347773.1;Parent=gene2736;Dbxref=InterPro:IPR000515,InterPro:IPR011044,UniProtKB%2FTrEMBL:Q7CJK1,Genbank:YP_002347773.1,GeneID:1175660;gbkey=CDS;gene=pstC;product=phosphate transporter permease;protein_id=YP_002347773.1;transl_table=11
NC_003143.1	RefSeq	region	3161803	3161889	.	-	.	ID=id2068;Note=PS00402 Binding-protein-dependent transport systems inner membrane comp. sign.;Dbxref=GeneID:1175660;gbkey=misc_feature;gene=pstC
NC_003143.1	RefSeq	gene	3163999	3166062	.	+	.	ID=gene2737;Name=ppk;Dbxref=GeneID:1175661;gbkey=Gene;gene=ppk;locus_tag=YPO2836
NC_003143.1	RefSeq	CDS	3163999	3166062	.	+	0	ID=cds2612;Name=YP_002347774.1;Parent=gene2737;Note=catalyzes the reversible transfer of the terminal phosphate of ATP to form a long chain polyphosphate;Dbxref=InterPro:IPR001736,InterPro:IPR003414,UniProtKB%2FTrEMBL:Q0WD64,Genbank:YP_002347774.1,GeneID:1175661;gbkey=CDS;gene=ppk;product=polyphosphate kinase;protein_id=YP_002347774.1;transl_table=11
NC_003143.1	RefSeq	gene	3166073	3167632	.	+	.	ID=gene2738;Name=ppx;Dbxref=GeneID:1175662;gbkey=Gene;gene=ppx;locus_tag=YPO2837
NC_003143.1	RefSeq	CDS	3166073	3167632	.	+	0	ID=cds2613;Name=YP_002347775.1;Parent=gene2738;Dbxref=InterPro:IPR003695,InterPro:IPR009057,UniProtKB%2FTrEMBL:Q7CJK2,Genbank:YP_002347775.1,GeneID:1175662;gbkey=CDS;gene=ppx;product=exopolyphosphatase;protein_id=YP_002347775.1;transl_table=11
NC_003143.1	RefSeq	gene	3167744	3167956	.	+	.	ID=gene2739;Name=yfgG;Dbxref=GeneID:1175663;gbkey=Gene;gene=yfgG;locus_tag=YPO2838
NC_003143.1	RefSeq	CDS	3167744	3167956	.	+	0	ID=cds2614;Name=YP_002347776.1;Parent=gene2739;Dbxref=UniProtKB%2FTrEMBL:Q7CJK3,Genbank:YP_002347776.1,GeneID:1175663;gbkey=CDS;gene=yfgG;product=hypothetical protein;protein_id=YP_002347776.1;transl_table=11
NC_003143.1	RefSeq	region	3167801	3167869	.	+	.	ID=id2069;Note=1 probable transmembrane helix predicted;Dbxref=GeneID:1175663;gbkey=misc_feature;gene=yfgG
NC_003143.1	RefSeq	gene	3168008	3169483	.	+	.	ID=gene2740;Name=mgtE;Dbxref=GeneID:1175664;gbkey=Gene;gene=mgtE;locus_tag=YPO2839
NC_003143.1	RefSeq	CDS	3168008	3169483	.	+	0	ID=cds2615;Name=YP_002347777.1;Parent=gene2740;Dbxref=InterPro:IPR000644,InterPro:IPR006667,InterPro:IPR006668,InterPro:IPR006669,InterPro:IPR011002,UniProtKB%2FTrEMBL:Q7CJK4,Genbank:YP_002347777.1,GeneID:1175664;gbkey=CDS;gene=mgtE;product=divalent cation transport protein;protein_id=YP_002347777.1;transl_table=11
NC_003143.1	RefSeq	gene	3169623	3170975	.	+	.	ID=gene2741;Name=YPO2840;Dbxref=GeneID:1175665;gbkey=Gene;locus_tag=YPO2840
NC_003143.1	RefSeq	CDS	3169623	3170975	.	+	0	ID=cds2616;Name=YP_002347778.1;Parent=gene2741;Dbxref=InterPro:IPR001023,InterPro:IPR013126,UniProtKB%2FTrEMBL:Q7CJK5,Genbank:YP_002347778.1,GeneID:1175665;gbkey=CDS;product=chaperone;protein_id=YP_002347778.1;transl_table=11
NC_003143.1	RefSeq	region	3170259	3170300	.	+	.	ID=id2070;Note=PS00329 Heat shock hsp70 proteins family signature 2.;Dbxref=GeneID:1175665;gbkey=misc_feature
NC_003143.1	RefSeq	gene	3171247	3172095	.	-	.	ID=gene2742;Name=YPO2841;Dbxref=GeneID:1175666;gbkey=Gene;locus_tag=YPO2841
NC_003143.1	RefSeq	CDS	3171247	3172095	.	-	0	ID=cds2617;Name=YP_002347779.1;Parent=gene2742;Dbxref=InterPro:IPR000515,UniProtKB%2FTrEMBL:Q0WD59,Genbank:YP_002347779.1,GeneID:1175666;gbkey=CDS;product=ABC transporter permease;protein_id=YP_002347779.1;transl_table=11
NC_003143.1	RefSeq	region	3171508	3171594	.	-	.	ID=id2071;Note=PS00402 Binding-protein-dependent transport systems inner membrane comp. sign.;Dbxref=GeneID:1175666;gbkey=misc_feature
NC_003143.1	RefSeq	gene	3172157	3173422	.	-	.	ID=gene2743;Name=YPO2842;Dbxref=GeneID:1175667;gbkey=Gene;locus_tag=YPO2842
NC_003143.1	RefSeq	CDS	3172157	3173422	.	-	0	ID=cds2618;Name=YP_002347780.1;Parent=gene2743;Dbxref=InterPro:IPR000515,UniProtKB%2FTrEMBL:Q0WD58,Genbank:YP_002347780.1,GeneID:1175667;gbkey=CDS;product=ABC transporter permease;protein_id=YP_002347780.1;transl_table=11
NC_003143.1	RefSeq	region	3172409	3172495	.	-	.	ID=id2072;Note=PS00402 Binding-protein-dependent transport systems inner membrane comp. sign.;Dbxref=GeneID:1175667;gbkey=misc_feature
NC_003143.1	RefSeq	gene	3173469	3174497	.	-	.	ID=gene2744;Name=YPO2843;Dbxref=GeneID:1175668;gbkey=Gene;locus_tag=YPO2843
NC_003143.1	RefSeq	CDS	3173469	3174497	.	-	0	ID=cds2619;Name=YP_002347781.1;Parent=gene2744;Dbxref=UniProtKB%2FTrEMBL:Q7CJK6,Genbank:YP_002347781.1,GeneID:1175668;gbkey=CDS;product=transport system periplasmic protein;protein_id=YP_002347781.1;transl_table=11
NC_003143.1	RefSeq	gene	3174550	3175863	.	-	.	ID=gene2745;Name=goaG;Dbxref=GeneID:1175669;gbkey=Gene;gene=goaG;locus_tag=YPO2844
NC_003143.1	RefSeq	CDS	3174550	3175863	.	-	0	ID=cds2620;Name=YP_002347782.1;Parent=gene2745;Note=catalyzes the formation of succinate semialdehyde and glutamate from 4-aminobutanoate and 2-oxoglutarate;Dbxref=InterPro:IPR001623,InterPro:IPR004632,InterPro:IPR005814,UniProtKB%2FTrEMBL:Q0WD56,Genbank:YP_002347782.1,GeneID:1175669;gbkey=CDS;gene=goaG;product=4-aminobutyrate aminotransferase;protein_id=YP_002347782.1;transl_table=11
NC_003143.1	RefSeq	region	3175000	3175116	.	-	.	ID=id2073;Note=PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site.;Dbxref=GeneID:1175669;gbkey=misc_feature;gene=goaG
NC_003143.1	RefSeq	region	3175711	3175770	.	-	.	ID=id2074;Note=PS00636 Nt-dnaJ domain signature.;Dbxref=GeneID:1175669;gbkey=misc_feature;gene=goaG
NC_003143.1	RefSeq	gene	3176021	3177526	.	+	.	ID=gene2746;Name=YPO2845;Dbxref=GeneID:1175670;gbkey=Gene;locus_tag=YPO2845
NC_003143.1	RefSeq	CDS	3176021	3177526	.	+	0	ID=cds2621;Name=YP_002347783.1;Parent=gene2746;Dbxref=InterPro:IPR000524,InterPro:IPR004839,UniProtKB%2FTrEMBL:Q7CJK7,Genbank:YP_002347783.1,GeneID:1175670;gbkey=CDS;product=GntR family transcriptional regulator;protein_id=YP_002347783.1;transl_table=11
NC_003143.1	RefSeq	gene	3177909	3178994	.	+	.	ID=gene2747;Name=YPO2846;Dbxref=GeneID:1175671;gbkey=Gene;locus_tag=YPO2846
NC_003143.1	RefSeq	CDS	3177909	3178994	.	+	0	ID=cds2622;Name=YP_002347784.1;Parent=gene2747;Dbxref=InterPro:IPR003439,InterPro:IPR003593,InterPro:IPR005893,InterPro:IPR008995,InterPro:IPR013611,UniProtKB%2FTrEMBL:Q0WD54,Genbank:YP_002347784.1,GeneID:1175671;gbkey=CDS;product=ABC transporter ATP-binding protein;protein_id=YP_002347784.1;transl_table=11
NC_003143.1	RefSeq	region	3178020	3178043	.	+	.	ID=id2075;Note=PS00017 ATP%2FGTP-binding site motif A %28P-loop%29.;Dbxref=GeneID:1175671;gbkey=misc_feature
NC_003143.1	RefSeq	region	3178314	3178358	.	+	.	ID=id2076;Note=PS00211 ABC transporters family signature.;Dbxref=GeneID:1175671;gbkey=misc_feature
NC_003143.1	RefSeq	gene	3179358	3180692	.	+	.	ID=gene2748;Name=yegM;Dbxref=GeneID:1175672;gbkey=Gene;gene=yegM;locus_tag=YPO2847
NC_003143.1	RefSeq	CDS	3179358	3180692	.	+	0	ID=cds2623;Name=YP_002347785.1;Parent=gene2748;Note=Part of a tripartite efflux system composed of MdtA%2C MdtB and MdtC which confers resistance against novobiocin and deoxycholate;Dbxref=InterPro:IPR006143,InterPro:IPR011053,InterPro:IPR011055,UniProtKB%2FTrEMBL:Q0WD53,Genbank:YP_002347785.1,GeneID:1175672;gbkey=CDS;gene=yegM;product=multidrug efflux system subunit MdtA;protein_id=YP_002347785.1;transl_table=11
NC_003143.1	RefSeq	region	3179388	3179456	.	+	.	ID=id2077;Note=1 probable transmembrane helix predicted;Dbxref=GeneID:1175672;gbkey=misc_feature;gene=yegM
NC_003143.1	RefSeq	gene	3180692	3183850	.	+	.	ID=gene2749;Name=yegN;Dbxref=GeneID:1175673;gbkey=Gene;gene=yegN;locus_tag=YPO2848
NC_003143.1	RefSeq	CDS	3180692	3183850	.	+	0	ID=cds2624;Name=YP_002347786.1;Parent=gene2749;Note=Part of a tripartite efflux system composed of MdtA%2C MdtB and MdtC which confers resistance against novobiocin and deoxycholate;Dbxref=InterPro:IPR000062,InterPro:IPR001036,UniProtKB%2FTrEMBL:Q0WD52,Genbank:YP_002347786.1,GeneID:1175673;gbkey=CDS;gene=yegN;product=multidrug efflux system subunit MdtB;protein_id=YP_002347786.1;transl_table=11
NC_003143.1	RefSeq	region	3183233	3183271	.	+	.	ID=id2078;Note=PS01331 Thymidylate kinase signature.;Dbxref=GeneID:1175673;gbkey=misc_feature;gene=yegN
NC_003143.1	RefSeq	gene	3183847	3186921	.	+	.	ID=gene2750;Name=yegO;Dbxref=GeneID:1175674;gbkey=Gene;gene=yegO;locus_tag=YPO2849
NC_003143.1	RefSeq	CDS	3183847	3186921	.	+	0	ID=cds2625;Name=YP_002347787.1;Parent=gene2750;Note=Part of a tripartite efflux system composed of MdtA%2C MdtB and MdtC%3B confers resistance against novobiocin and deoxycholate;Dbxref=InterPro:IPR001036,UniProtKB%2FTrEMBL:Q0WD51,Genbank:YP_002347787.1,GeneID:1175674;gbkey=CDS;gene=yegO;product=multidrug efflux system subunit MdtC;protein_id=YP_002347787.1;transl_table=11
NC_003143.1	RefSeq	gene	3186955	3188352	.	+	.	ID=gene2751;Name=yegB;Dbxref=GeneID:1175675;gbkey=Gene;gene=yegB;locus_tag=YPO2850
NC_003143.1	RefSeq	CDS	3186955	3188352	.	+	0	ID=cds2626;Name=YP_002347788.1;Parent=gene2751;Dbxref=InterPro:IPR001411,InterPro:IPR007114,InterPro:IPR011701,UniProtKB%2FTrEMBL:Q7CJL1,Genbank:YP_002347788.1,GeneID:1175675;gbkey=CDS;gene=yegB;product=multidrug efflux system protein MdtE;protein_id=YP_002347788.1;transl_table=11
NC_003143.1	RefSeq	gene	3188383	3189764	.	+	.	ID=gene2752;Name=baeS;Dbxref=GeneID:1175676;gbkey=Gene;gene=baeS;locus_tag=YPO2851;pseudo=true
NC_003143.1	RefSeq	gene	3189777	3190496	.	+	.	ID=gene2753;Name=baeR;Dbxref=GeneID:1175677;gbkey=Gene;gene=baeR;locus_tag=YPO2853
NC_003143.1	RefSeq	CDS	3189777	3190496	.	+	0	ID=cds2627;Name=YP_002347789.1;Parent=gene2753;Note=response regulator in two-component regulatory system with BaeS%3B regulator of RNA synthesis%2C flagellar biosynthesis%2C chemotaxis and transport;Dbxref=InterPro:IPR001789,InterPro:IPR001867,InterPro:IPR011006,UniProtKB%2FTrEMBL:Q0WD49,Genbank:YP_002347789.1,GeneID:1175677;gbkey=CDS;gene=baeR;product=DNA-binding transcriptional regulator BaeR;protein_id=YP_002347789.1;transl_table=11
NC_003143.1	RefSeq	region	3190482	3190493	.	+	.	ID=id2079;Note=PS00294 Prenyl group binding site %28CAAX box%29.;Dbxref=GeneID:1175677;gbkey=misc_feature;gene=baeR
NC_003143.1	RefSeq	gene	3190633	3190971	.	+	.	ID=gene2754;Name=YPO2854;Dbxref=GeneID:1175678;gbkey=Gene;locus_tag=YPO2854
NC_003143.1	RefSeq	CDS	3190633	3190971	.	+	0	ID=cds2628;Name=YP_002347790.1;Parent=gene2754;Dbxref=InterPro:IPR010879,UniProtKB%2FTrEMBL:Q0WD48,Genbank:YP_002347790.1,GeneID:1175678;gbkey=CDS;product=hypothetical protein;protein_id=YP_002347790.1;transl_table=11
NC_003143.1	RefSeq	gene	3191246	3192640	.	+	.	ID=gene2755;Name=YPO2855;Dbxref=GeneID:1175679;gbkey=Gene;locus_tag=YPO2855
NC_003143.1	RefSeq	CDS	3191246	3192640	.	+	0	ID=cds2629;Name=YP_002347791.1;Parent=gene2755;Dbxref=InterPro:IPR001539,UniProtKB%2FTrEMBL:Q7CJL2,Genbank:YP_002347791.1,GeneID:1175679;gbkey=CDS;product=protease;protein_id=YP_002347791.1;transl_table=11
NC_003143.1	RefSeq	region	3191759	3191815	.	+	.	ID=id2080;Note=PS01276 Peptidase family U32 signature.;Dbxref=GeneID:1175679;gbkey=misc_feature
NC_003143.1	RefSeq	gene	3193276	3194166	.	+	.	ID=gene2756;Name=YPO2856;Dbxref=GeneID:1175680;gbkey=Gene;locus_tag=YPO2856
NC_003143.1	RefSeq	CDS	3193276	3194166	.	+	0	ID=cds2630;Name=YP_002347792.1;Parent=gene2756;Note=cytosolic protein with phosphatidylglycerol kinase activity%3B undetermined physiological role;Dbxref=InterPro:IPR001206,InterPro:IPR005218,UniProtKB%2FTrEMBL:Q7CJL3,Genbank:YP_002347792.1,GeneID:1175680;gbkey=CDS;product=lipid kinase;protein_id=YP_002347792.1;transl_table=11
NC_003143.1	RefSeq	gene	3194433	3194897	.	-	.	ID=gene2757;Name=YPO2857;Dbxref=GeneID:1175681;gbkey=Gene;locus_tag=YPO2857
NC_003143.1	RefSeq	CDS	3194433	3194897	.	-	0	ID=cds2631;Name=YP_002347793.1;Parent=gene2757;Dbxref=UniProtKB%2FTrEMBL:Q0WD45,Genbank:YP_002347793.1,GeneID:1175681;gbkey=CDS;product=hypothetical protein;protein_id=YP_002347793.1;transl_table=11
NC_003143.1	RefSeq	gene	3195291	3196061	.	+	.	ID=gene2758;Name=YPO2858;Dbxref=GeneID:1175682;gbkey=Gene;locus_tag=YPO2858
NC_003143.1	RefSeq	CDS	3195291	3196061	.	+	0	ID=cds2632;Name=YP_002347794.1;Parent=gene2758;Dbxref=UniProtKB%2FTrEMBL:Q0WD44,Genbank:YP_002347794.1,GeneID:1175682;gbkey=CDS;product=hypothetical protein;protein_id=YP_002347794.1;transl_table=11
NC_003143.1	RefSeq	gene	3196123	3196923	.	-	.	ID=gene2759;Name=thiD;Dbxref=GeneID:1175683;gbkey=Gene;gene=thiD;locus_tag=YPO2859
NC_003143.1	RefSeq	CDS	3196123	3196923	.	-	0	ID=cds2633;Name=YP_002347795.1;Parent=gene2759;Note=catalyzes the formation of 4-amino-2-methyl-5-diphosphomethylpyrimidine;Dbxref=InterPro:IPR004399,InterPro:IPR013749,UniProtKB%2FTrEMBL:Q7CJL4,Genbank:YP_002347795.1,GeneID:1175683;gbkey=CDS;gene=thiD;product=phosphomethylpyrimidine kinase;protein_id=YP_002347795.1;transl_table=11
NC_003143.1	RefSeq	gene	3197433	3197912	.	+	.	ID=gene2760;Name=YPO2860;Dbxref=GeneID:1175684;gbkey=Gene;locus_tag=YPO2860
NC_003143.1	RefSeq	CDS	3197433	3197912	.	+	0	ID=cds2634;Name=YP_002347796.1;Parent=gene2760;Note=No significant database matches. CDS DNA has a low GC content%2C 32.91%25. Similar to YPO3895 %2856.6%25 identity in 159 aa overlap%29%2C YPO3935 %2855.7%25 identity in 158 aa overlap%29%2C YPO3894 %2853.8%25 identity in 160 aa overlap%29. C-terminal region of the CDS is similar to YPO3893 %2855.7%25 identity in 122 aa overlap%29;Dbxref=InterPro:IPR010351,UniProtKB%2FTrEMBL:Q7CJL5,Genbank:YP_002347796.1,GeneID:1175684;gbkey=CDS;product=hypothetical protein;protein_id=YP_002347796.1;transl_table=11
NC_003143.1	RefSeq	repeat_region	3197462	3197890	.	+	.	ID=id2081;Note=Repeated sequence thought to encode a possible membrane protein with no database hits. This sequence is repeated at positions :4366790..4367265%2C 4367331..436780%2C4367872..4368406%2C complement%284419711..4420226%29 and complement%284484307..4484653%29.;Dbxref=GeneID:1175684;gbkey=repeat_region
NC_003143.1	RefSeq	region	3197475	3197528	.	+	.	ID=id2082;Note=1 probable transmembrane helix predicted;Dbxref=GeneID:1175684;gbkey=misc_feature
NC_003143.1	RefSeq	gene	3197971	3198225	.	+	.	ID=gene2761;Name=YPO2861;Dbxref=GeneID:1175685;gbkey=Gene;locus_tag=YPO2861;pseudo=true
NC_003143.1	RefSeq	region	3197971	3198225	.	+	.	ID=id2083;Note=No significant database matches. CDS translational stop codon lies within a downstream IS285 element. Therefore CDS is probably disrupted by the insertion %28at the C-terminal end%29 of the IS285 element. It is not clear whether this insertion affects the function of the protein. Similar to N-terminal region of YPO4106 %2856.5%25 identity in 85 aa overlap%29;Dbxref=GeneID:1175685;gbkey=misc_feature;pseudo=true
NC_003143.1	RefSeq	repeat_region	3198226	3199540	.	-	.	ID=id2084;Note=insertion sequence:IS285;gbkey=repeat_region
NC_003143.1	RefSeq	repeat_region	3198226	3198254	.	+	.	ID=id2085;Note=IS285 inverted repeat;gbkey=repeat_region
NC_003143.1	RefSeq	gene	3198261	3199469	.	-	.	ID=gene2762;Name=y1062;Dbxref=GeneID:1175686;gbkey=Gene;gene=y1062;gene_synonym=ypmt1.80C;locus_tag=YPO2862
NC_003143.1	RefSeq	CDS	3198261	3199469	.	-	0	ID=cds2635;Name=YP_002347797.1;Parent=gene2762;Dbxref=InterPro:IPR001207,UniProtKB%2FTrEMBL:Q7ARB0,Genbank:YP_002347797.1,GeneID:1175686;gbkey=CDS;gene=y1062;product=transposase for the IS285 insertion element;protein_id=YP_002347797.1;transl_table=11
NC_003143.1	RefSeq	region	3198702	3198776	.	-	.	ID=id2086;Note=PS01007 Transposases%2C Mutator family%2C signature.;Dbxref=GeneID:1175686;gbkey=misc_feature;gene=y1062
NC_003143.1	RefSeq	repeat_region	3199512	3199540	.	-	.	ID=id2087;Note=IS285 inverted repeat;gbkey=repeat_region
NC_003143.1	RefSeq	gene	3199551	3200195	.	+	.	ID=gene2763;Name=YPO2863;Dbxref=GeneID:1175687;gbkey=Gene;locus_tag=YPO2863
NC_003143.1	RefSeq	CDS	3199551	3200195	.	+	0	ID=cds2636;Name=YP_002347798.1;Parent=gene2763;Dbxref=UniProtKB%2FTrEMBL:Q0WD40,Genbank:YP_002347798.1,GeneID:1175687;gbkey=CDS;product=hypothetical protein;protein_id=YP_002347798.1;transl_table=11
NC_003143.1	RefSeq	gene	3200192	3200587	.	+	.	ID=gene2764;Name=YPO2864;Dbxref=GeneID:1175688;gbkey=Gene;locus_tag=YPO2864
NC_003143.1	RefSeq	CDS	3200192	3200587	.	+	0	ID=cds2637;Name=YP_002347799.1;Parent=gene2764;Note=No significant database matches. CDS DNA has a low GC content%2C 27.02%25. Similar to YPO2866 %2865.6%25 identity in 131 aa overlap%29%2C YPO2867 %2862.9%25 identity in 132 aa overlap%29 and YPO2865 %2861.8%25 identity in 131 aa overlap%29;Dbxref=InterPro:IPR010665,UniProtKB%2FTrEMBL:Q7CJL7,Genbank:YP_002347799.1,GeneID:1175688;gbkey=CDS;product=hypothetical protein;protein_id=YP_002347799.1;transl_table=11
NC_003143.1	RefSeq	repeat_region	3200480	3201395	.	+	.	ID=id2088;Note=This region appears to have arisen following a duplication event.;gbkey=repeat_region
NC_003143.1	RefSeq	gene	3200651	3201046	.	+	.	ID=gene2765;Name=YPO2865;Dbxref=GeneID:1175689;gbkey=Gene;locus_tag=YPO2865
NC_003143.1	RefSeq	CDS	3200651	3201046	.	+	0	ID=cds2638;Name=YP_002347800.1;Parent=gene2765;Dbxref=InterPro:IPR010665,UniProtKB%2FTrEMBL:Q7CJL8,Genbank:YP_002347800.1,GeneID:1175689;gbkey=CDS;product=hypothetical protein;protein_id=YP_002347800.1;transl_table=11
NC_003143.1	RefSeq	gene	3201084	3201503	.	+	.	ID=gene2766;Name=YPO2866;Dbxref=GeneID:1175690;gbkey=Gene;locus_tag=YPO2866
NC_003143.1	RefSeq	CDS	3201084	3201503	.	+	0	ID=cds2639;Name=YP_002347801.1;Parent=gene2766;Dbxref=InterPro:IPR010665,UniProtKB%2FTrEMBL:Q7CJL9,Genbank:YP_002347801.1,GeneID:1175690;gbkey=CDS;product=hypothetical protein;protein_id=YP_002347801.1;transl_table=11
NC_003143.1	RefSeq	gene	3201567	3201965	.	+	.	ID=gene2767;Name=YPO2867;Dbxref=GeneID:1175691;gbkey=Gene;locus_tag=YPO2867
NC_003143.1	RefSeq	CDS	3201567	3201965	.	+	0	ID=cds2640;Name=YP_002347802.1;Parent=gene2767;Dbxref=InterPro:IPR010665,UniProtKB%2FTrEMBL:Q7CJM0,Genbank:YP_002347802.1,GeneID:1175691;gbkey=CDS;product=hypothetical protein;protein_id=YP_002347802.1;transl_table=11
NC_003143.1	RefSeq	gene	3201989	3202468	.	+	.	ID=gene2768;Name=YPO2868;Dbxref=GeneID:1175692;gbkey=Gene;locus_tag=YPO2868
NC_003143.1	RefSeq	CDS	3201989	3202468	.	+	0	ID=cds2641;Name=YP_002347803.1;Parent=gene2768;Dbxref=InterPro:IPR008514,UniProtKB%2FTrEMBL:Q7CJM1,Genbank:YP_002347803.1,GeneID:1175692;gbkey=CDS;product=hypothetical protein;protein_id=YP_002347803.1;transl_table=11
NC_003143.1	RefSeq	repeat_region	3202520	3203231	.	-	.	ID=id2089;Note=Contains a %27G%27 at nucleotide position 315%7EIS200-like insertion sequence:IS1541;gbkey=repeat_region
NC_003143.1	RefSeq	gene	3202628	3203086	.	-	.	ID=gene2769;Name=tnp;Dbxref=GeneID:1175693;gbkey=Gene;gene=tnp;locus_tag=YPO2869
NC_003143.1	RefSeq	CDS	3202628	3203086	.	-	0	ID=cds2642;Name=YP_002347804.1;Parent=gene2769;Dbxref=InterPro:IPR002686,UniProtKB%2FTrEMBL:Q74YM6,Genbank:YP_002347804.1,GeneID:1175693;gbkey=CDS;gene=tnp;product=transposase for the IS1541 insertion element;protein_id=YP_002347804.1;transl_table=11
NC_003143.1	RefSeq	gene	3203461	3205038	.	-	.	ID=gene2770;Name=guaA;Dbxref=GeneID:1175694;gbkey=Gene;gene=guaA;locus_tag=YPO2870
NC_003143.1	RefSeq	CDS	3203461	3205038	.	-	0	ID=cds2643;Name=YP_002347805.1;Parent=gene2770;Note=contains glutamine-hydrolyzing domain and glutamine amidotransferase%3B GMP-binding domain%3B functions to produce GMP from XMP in the IMP pathway;Dbxref=InterPro:IPR000991,InterPro:IPR001317,InterPro:IPR001674,InterPro:IPR004506,InterPro:IPR004739,InterPro:IPR006220,InterPro:IPR011702,InterPro:IPR012998,UniProtKB%2FTrEMBL:Q0WD33,Genbank:YP_002347805.1,GeneID:1175694;gbkey=CDS;gene=guaA;product=GMP synthase;protein_id=YP_002347805.1;transl_table=11
NC_003143.1	RefSeq	region	3204763	3204798	.	-	.	ID=id2090;Note=PS00442 Glutamine amidotransferases class-I active site.;Dbxref=GeneID:1175694;gbkey=misc_feature;gene=guaA
NC_003143.1	RefSeq	gene	3205218	3206681	.	-	.	ID=gene2771;Name=guaB;Dbxref=GeneID:1175695;gbkey=Gene;gene=guaB;gene_synonym=guaR;locus_tag=YPO2871
NC_003143.1	RefSeq	CDS	3205218	3206681	.	-	0	ID=cds2644;Name=YP_002347806.1;Parent=gene2771;Note=catalyzes the synthesis of xanthosine monophosphate by the NAD%2B dependent oxidation of inosine monophosphate;Dbxref=InterPro:IPR000644,InterPro:IPR001093,InterPro:IPR005990,UniProtKB%2FTrEMBL:Q0WD32,Genbank:YP_002347806.1,GeneID:1175695;gbkey=CDS;gene=guaB;product=inosine 5%27-monophosphate dehydrogenase;protein_id=YP_002347806.1;transl_table=11
NC_003143.1	RefSeq	region	3205761	3205799	.	-	.	ID=id2091;Note=PS00487 IMP dehydrogenase %2F GMP reductase signature.;Dbxref=GeneID:1175695;gbkey=misc_feature;gene=guaB
NC_003143.1	RefSeq	gene	3206851	3208230	.	+	.	ID=gene2772;Name=xseA;Dbxref=GeneID:1175696;gbkey=Gene;gene=xseA;locus_tag=YPO2872
NC_003143.1	RefSeq	CDS	3206851	3208230	.	+	0	ID=cds2645;Name=YP_002347807.1;Parent=gene2772;Note=bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides;Dbxref=InterPro:IPR003753,InterPro:IPR004365,InterPro:IPR008994,UniProtKB%2FTrEMBL:Q0WD31,Genbank:YP_002347807.1,GeneID:1175696;gbkey=CDS;gene=xseA;product=exodeoxyribonuclease VII large subunit;protein_id=YP_002347807.1;transl_table=11
NC_003143.1	RefSeq	gene	3208363	3208587	.	-	.	ID=gene2773;Name=YPO2873;Dbxref=GeneID:1175697;gbkey=Gene;locus_tag=YPO2873
NC_003143.1	RefSeq	CDS	3208363	3208587	.	-	0	ID=cds2646;Name=YP_002347808.1;Parent=gene2773;Dbxref=InterPro:IPR010807,UniProtKB%2FTrEMBL:Q7CJM3,Genbank:YP_002347808.1,GeneID:1175697;gbkey=CDS;product=hypothetical protein;protein_id=YP_002347808.1;transl_table=11
NC_003143.1	RefSeq	region	3208510	3208527	.	-	.	ID=id2092;Note=PS00190 Cytochrome c family heme-binding site signature.;Dbxref=GeneID:1175697;gbkey=misc_feature
NC_003143.1	RefSeq	gene	3208636	3209592	.	-	.	ID=gene2774;Name=YPO2874;Dbxref=GeneID:1175698;gbkey=Gene;locus_tag=YPO2874
NC_003143.1	RefSeq	CDS	3208636	3209592	.	-	0	ID=cds2647;Name=YP_002347809.1;Parent=gene2774;Dbxref=InterPro:IPR004776,UniProtKB%2FTrEMBL:Q7CJM4,Genbank:YP_002347809.1,GeneID:1175698;gbkey=CDS;product=hypothetical protein;protein_id=YP_002347809.1;transl_table=11
NC_003143.1	RefSeq	gene	3209939	3211426	.	-	.	ID=gene2775;Name=engA;Dbxref=GeneID:1175699;gbkey=Gene;gene=engA;locus_tag=YPO2875
NC_003143.1	RefSeq	CDS	3209939	3211426	.	-	0	ID=cds2648;Name=YP_002347810.1;Parent=gene2775;Note=EngA%3B essential Neisserial GTPase%3B synchronizes cellular events by interacting with multiple targets with tandem G-domains%3B overexpression in Escherichia coli suppresses rrmJ mutation%3B structural analysis of the Thermotoga maritima ortholog shows different nucleotide binding affinities in the two binding domains;Dbxref=InterPro:IPR002917,InterPro:IPR005225,InterPro:IPR005289,InterPro:IPR006073,UniProtKB%2FTrEMBL:Q0WD28,Genbank:YP_002347810.1,GeneID:1175699;gbkey=CDS;gene=engA;product=GTP-binding protein EngA;protein_id=YP_002347810.1;transl_table=11
NC_003143.1	RefSeq	region	3210764	3210787	.	-	.	ID=id2093;Note=PS00017 ATP%2FGTP-binding site motif A %28P-loop%29.;Dbxref=GeneID:1175699;gbkey=misc_feature;gene=engA
NC_003143.1	RefSeq	region	3211379	3211402	.	-	.	ID=id2094;Note=PS00017 ATP%2FGTP-binding site motif A %28P-loop%29.;Dbxref=GeneID:1175699;gbkey=misc_feature;gene=engA
NC_003143.1	RefSeq	gene	3211574	3212755	.	-	.	ID=gene2776;Name=yfgL;Dbxref=GeneID:1175700;gbkey=Gene;gene=yfgL;locus_tag=YPO2876
NC_003143.1	RefSeq	CDS	3211574	3212755	.	-	0	ID=cds2649;Name=YP_002347811.1;Parent=gene2776;Note=with YaeT%2C YfiO%2C and NlpB forms a complex involved in outer membrane protein biogenesis;Dbxref=InterPro:IPR002372,InterPro:IPR011047,UniProtKB%2FTrEMBL:Q7CJM5,Genbank:YP_002347811.1,GeneID:1175700;gbkey=CDS;gene=yfgL;product=outer membrane protein assembly complex subunit YfgL;protein_id=YP_002347811.1;transl_table=11
NC_003143.1	RefSeq	region	3212696	3212728	.	-	.	ID=id2095;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site.;Dbxref=GeneID:1175700;gbkey=misc_feature;gene=yfgL
NC_003143.1	RefSeq	gene	3212767	3213402	.	-	.	ID=gene2777;Name=yfgM;Dbxref=GeneID:1175701;gbkey=Gene;gene=yfgM;locus_tag=YPO2877
NC_003143.1	RefSeq	CDS	3212767	3213402	.	-	0	ID=cds2650;Name=YP_002347812.1;Parent=gene2777;Dbxref=InterPro:IPR011990,UniProtKB%2FTrEMBL:Q7CJM6,Genbank:YP_002347812.1,GeneID:1175701;gbkey=CDS;gene=yfgM;product=hypothetical protein;protein_id=YP_002347812.1;transl_table=11
NC_003143.1	RefSeq	region	3213274	3213339	.	-	.	ID=id2096;Note=1 probable transmembrane helix predicted;Dbxref=GeneID:1175701;gbkey=misc_feature;gene=yfgM
NC_003143.1	RefSeq	gene	3213416	3214690	.	-	.	ID=gene2778;Name=hisS;Dbxref=GeneID:1175702;gbkey=Gene;gene=hisS;locus_tag=YPO2878
NC_003143.1	RefSeq	CDS	3213416	3214690	.	-	0	ID=cds2651;Name=YP_002347813.1;Parent=gene2778;Note=catalyzes a two-step reaction%2C first charging a histidine molecule by linking its carboxyl group to the alpha-phosphate of ATP%2C followed by transfer of the aminoacyl-adenylate to its tRNA%3B class II aminoacyl-tRNA synthetase%3B forms homodimers%3B some organisms have a paralogous gene%2C hisZ%2C that is similar to hisS and produces a protein that performs the first step in histidine biosynthesis along with HisG;Dbxref=InterPro:IPR002314,InterPro:IPR004154,InterPro:IPR004516,InterPro:IPR006195,UniProtKB%2FTrEMBL:Q0WD25,Genbank:YP_002347813.1,GeneID:1175702;gbkey=CDS;gene=hisS;product=histidyl-tRNA synthetase;protein_id=YP_002347813.1;transl_table=11
NC_003143.1	RefSeq	region	3213746	3213775	.	-	.	ID=id2097;Note=PS00339 Aminoacyl-transfer RNA synthetases class-II signature 2.;Dbxref=GeneID:1175702;gbkey=misc_feature;gene=hisS
NC_003143.1	RefSeq	gene	3214899	3216026	.	-	.	ID=gene2779;Name=ispG;Dbxref=GeneID:1175703;gbkey=Gene;gene=ispG;gene_synonym=gcpE;locus_tag=YPO2879
NC_003143.1	RefSeq	CDS	3214899	3216026	.	-	0	ID=cds2652;Name=YP_002347814.1;Parent=gene2779;Note=catalyzes the conversion of 2C-methyl-D-erythritol 2%2C4-cyclodiphosphate into 4-hydroxy-3-methyl-2-en-1-yl diphosphate%3B involved in isoprenoid synthesis;Dbxref=InterPro:IPR004588,InterPro:IPR011005,UniProtKB%2FTrEMBL:Q0WD24,Genbank:YP_002347814.1,GeneID:1175703;gbkey=CDS;gene=ispG;product=4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase;protein_id=YP_002347814.1;transl_table=11
NC_003143.1	RefSeq	gene	3216088	3217125	.	-	.	ID=gene2780;Name=yfgA;Dbxref=GeneID:1175704;gbkey=Gene;gene=yfgA;locus_tag=YPO2880
NC_003143.1	RefSeq	CDS	3216088	3217125	.	-	0	ID=cds2653;Name=YP_002347815.1;Parent=gene2780;Dbxref=InterPro:IPR001387,InterPro:IPR010982,UniProtKB%2FTrEMBL:Q7CJM7,Genbank:YP_002347815.1,GeneID:1175704;gbkey=CDS;gene=yfgA;product=cytoskeletal protein RodZ;protein_id=YP_002347815.1;transl_table=11
NC_003143.1	RefSeq	region	3216727	3216792	.	-	.	ID=id2098;Note=1 probable transmembrane helix predicted;Dbxref=GeneID:1175704;gbkey=misc_feature;gene=yfgA
NC_003143.1	RefSeq	region	3216979	3217044	.	-	.	ID=id2099;Note=Predicted helix-turn-helix motif with score 1605 %28%2B4.65 SD%29 at aa 28-49%2C sequence LTQQTVAERLCLKVSTIRDIEE;Dbxref=GeneID:1175704;gbkey=misc_feature;gene=yfgA
NC_003143.1	RefSeq	gene	3217115	3217864	.	-	.	ID=gene2781;Name=yfgA;Dbxref=GeneID:1175705;gbkey=Gene;gene=yfgA;locus_tag=YPO2881
NC_003143.1	RefSeq	CDS	3217115	3217864	.	-	0	ID=cds2654;Name=YP_002347816.1;Parent=gene2781;Dbxref=InterPro:IPR011990,InterPro:IPR013026,InterPro:IPR013105,InterPro:IPR013360,UniProtKB%2FTrEMBL:Q7CJM8,Genbank:YP_002347816.1,GeneID:1175705;gbkey=CDS;product=fimbrial biogenesis protein;protein_id=YP_002347816.1;transl_table=11
NC_003143.1	RefSeq	region	3217808	3217840	.	-	.	ID=id2100;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site.;Dbxref=GeneID:1175705;gbkey=misc_feature
NC_003143.1	RefSeq	gene	3218018	3219214	.	-	.	ID=gene2782;Name=YPO2882;Dbxref=GeneID:1175706;gbkey=Gene;locus_tag=YPO2882
NC_003143.1	RefSeq	CDS	3218018	3219214	.	-	0	ID=cds2655;Name=YP_002347817.1;Parent=gene2782;Note=23S rRNA m2A2503 methyltransferase%3B methylates the C2 position of the A2530 nucleotide in 23S rRNA%3B may be involved in antibiotic resistance;Dbxref=InterPro:IPR004383,InterPro:IPR006638,InterPro:IPR007197,UniProtKB%2FTrEMBL:Q7CJM9,Genbank:YP_002347817.1,GeneID:1175706;gbkey=CDS;product=ribosomal RNA large subunit methyltransferase N;protein_id=YP_002347817.1;transl_table=11
NC_003143.1	RefSeq	gene	3219476	3219904	.	-	.	ID=gene2783;Name=ndk;Dbxref=GeneID:1175707;gbkey=Gene;gene=ndk;locus_tag=YPO2883
NC_003143.1	RefSeq	CDS	3219476	3219904	.	-	0	ID=cds2656;Name=YP_002347818.1;Parent=gene2783;Note=catalyzes the formation of nucleoside triphosphate from ATP and nucleoside diphosphate;Dbxref=InterPro:IPR001564,InterPro:IPR012005,UniProtKB%2FTrEMBL:Q0WD20,Genbank:YP_002347818.1,GeneID:1175707;gbkey=CDS;gene=ndk;product=nucleoside diphosphate kinase;protein_id=YP_002347818.1;transl_table=11
NC_003143.1	RefSeq	region	3219539	3219565	.	-	.	ID=id2101;Note=PS00469 Nucleoside diphosphate kinases active site.;Dbxref=GeneID:1175707;gbkey=misc_feature;gene=ndk
NC_003143.1	RefSeq	gene	3220231	3222651	.	-	.	ID=gene2784;Name=YPO2884;Dbxref=GeneID:1175708;gbkey=Gene;locus_tag=YPO2884
NC_003143.1	RefSeq	CDS	3220231	3222651	.	-	0	ID=cds2657;Name=YP_002347819.1;Parent=gene2784;Dbxref=InterPro:IPR001064,InterPro:IPR008985,InterPro:IPR011024,UniProtKB%2FTrEMBL:Q7CJN0,Genbank:YP_002347819.1,GeneID:1175708;gbkey=CDS;product=hypothetical protein;protein_id=YP_002347819.1;transl_table=11
NC_003143.1	RefSeq	gene	3223437	3227729	.	+	.	ID=gene2785;Name=yapA;Dbxref=GeneID:1175710;gbkey=Gene;gene=yapA;locus_tag=YPO2886
NC_003143.1	RefSeq	CDS	3223437	3227729	.	+	0	ID=cds2658;Name=YP_002347821.1;Parent=gene2785;Dbxref=InterPro:IPR004899,InterPro:IPR005546,InterPro:IPR006315,InterPro:IPR011050,UniProtKB%2FTrEMBL:Q0WD17,Genbank:YP_002347821.1,GeneID:1175710;gbkey=CDS;gene=yapA;product=autotransporter protein;protein_id=YP_002347821.1;transl_table=11
NC_003143.1	RefSeq	gene	3228287	3231796	.	+	.	ID=gene2786;Name=yapB;Dbxref=GeneID:1175711;gbkey=Gene;gene=yapB;locus_tag=YPO2887;pseudo=true
NC_003143.1	RefSeq	region	3228320	3228388	.	+	.	ID=id2102;Note=1 probable transmembrane helix predicted;Dbxref=GeneID:1175711;gbkey=misc_feature;gene=yapB
NC_003143.1	RefSeq	gene	3232069	3233022	.	-	.	ID=gene2787;Name=YPO2888;Dbxref=GeneID:1175712;gbkey=Gene;locus_tag=YPO2888
NC_003143.1	RefSeq	CDS	3232069	3233022	.	-	0	ID=cds2659;Name=YP_002347822.1;Parent=gene2787;Note=enhances serine sensitivity caused by inhibition of homoserine dehydrogenase I;Dbxref=InterPro:IPR009839,UniProtKB%2FTrEMBL:Q7CJN2,Genbank:YP_002347822.1,GeneID:1175712;gbkey=CDS;product=enhanced serine sensitivity protein SseB;protein_id=YP_002347822.1;transl_table=11
NC_003143.1	RefSeq	gene	3233101	3234399	.	-	.	ID=gene2788;Name=pepB;Dbxref=GeneID:1175713;gbkey=Gene;gene=pepB;locus_tag=YPO2889
NC_003143.1	RefSeq	CDS	3233101	3234399	.	-	0	ID=cds2660;Name=YP_002347823.1;Parent=gene2788;Note=catalyzes the removal of an N-terminal amino acid from a peptide or arylamide;Dbxref=InterPro:IPR000819,InterPro:IPR008330,UniProtKB%2FTrEMBL:Q0WD15,Genbank:YP_002347823.1,GeneID:1175713;gbkey=CDS;gene=pepB;product=aminopeptidase;protein_id=YP_002347823.1;transl_table=11
NC_003143.1	RefSeq	region	3233551	3233574	.	-	.	ID=id2103;Note=PS00631 Cytosol aminopeptidase signature.;Dbxref=GeneID:1175713;gbkey=misc_feature;gene=pepB
NC_003143.1	RefSeq	gene	3234539	3234739	.	-	.	ID=gene2789;Name=YPO2890;Dbxref=GeneID:1175714;gbkey=Gene;locus_tag=YPO2890
NC_003143.1	RefSeq	CDS	3234539	3234739	.	-	0	ID=cds2661;Name=YP_002347824.1;Parent=gene2789;Dbxref=InterPro:IPR007479,UniProtKB%2FTrEMBL:Q7CJN3,Genbank:YP_002347824.1,GeneID:1175714;gbkey=CDS;product=hypothetical protein;protein_id=YP_002347824.1;transl_table=11
NC_003143.1	RefSeq	gene	3234769	3235104	.	-	.	ID=gene2790;Name=fdx;Dbxref=GeneID:1175715;gbkey=Gene;gene=fdx;locus_tag=YPO2891
NC_003143.1	RefSeq	CDS	3234769	3235104	.	-	0	ID=cds2662;Name=YP_002347825.1;Parent=gene2790;Dbxref=InterPro:IPR001041,InterPro:IPR001055,InterPro:IPR011536,InterPro:IPR012675,UniProtKB%2FTrEMBL:Q7CJN4,Genbank:YP_002347825.1,GeneID:1175715;gbkey=CDS;gene=fdx;product=adrenodoxin family ferredoxin;protein_id=YP_002347825.1;transl_table=11
NC_003143.1	RefSeq	region	3234949	3234981	.	-	.	ID=id2104;Note=PS00814 Adrenodoxin family%2C iron-sulfur binding region signature.;Dbxref=GeneID:1175715;gbkey=misc_feature;gene=fdx
NC_003143.1	RefSeq	gene	3235107	3237059	.	-	.	ID=gene2791;Name=hscA;Dbxref=GeneID:1175716;gbkey=Gene;gene=hscA;locus_tag=YPO2892
NC_003143.1	RefSeq	CDS	3235107	3237059	.	-	0	ID=cds2663;Name=YP_002347826.1;Parent=gene2791;Note=involved in the maturation of iron-sulfur cluster-containing proteins;Dbxref=InterPro:IPR001023,InterPro:IPR010236,InterPro:IPR013126,UniProtKB%2FTrEMBL:Q0WD12,Genbank:YP_002347826.1,GeneID:1175716;gbkey=CDS;gene=hscA;product=chaperone protein HscA;protein_id=YP_002347826.1;transl_table=11
NC_003143.1	RefSeq	region	3235920	3235964	.	-	.	ID=id2105;Note=PS01036 Heat shock hsp70 proteins family signature 3.;Dbxref=GeneID:1175716;gbkey=misc_feature;gene=hscA
NC_003143.1	RefSeq	region	3236304	3236345	.	-	.	ID=id2106;Note=PS00329 Heat shock hsp70 proteins family signature 2.;Dbxref=GeneID:1175716;gbkey=misc_feature;gene=hscA
NC_003143.1	RefSeq	region	3236825	3236914	.	-	.	ID=id2107;Note=Imperfect repeat%2C TAGC%28C%2FA%29G%28A%2FG%29T%28G%2FC%29AACAG%28T%2FC%29TAA x5;Dbxref=GeneID:1175716;gbkey=misc_feature;gene=hscA
NC_003143.1	RefSeq	region	3236967	3236990	.	-	.	ID=id2108;Note=PS00297 Heat shock hsp70 proteins family signature 1.;Dbxref=GeneID:1175716;gbkey=misc_feature;gene=hscA
NC_003143.1	RefSeq	gene	3237302	3237826	.	-	.	ID=gene2792;Name=hscB;Dbxref=GeneID:1175717;gbkey=Gene;gene=hscB;locus_tag=YPO2893
NC_003143.1	RefSeq	CDS	3237302	3237826	.	-	0	ID=cds2664;Name=YP_002347827.1;Parent=gene2792;Note=J-type co-chaperone that regulates the ATPase and peptide-binding activity of Hsc66 chaperone%3B may function in biogenesis of iron-sulfur proteins;Dbxref=InterPro:IPR001623,InterPro:IPR004640,InterPro:IPR009073,InterPro:IPR012895,UniProtKB%2FTrEMBL:Q0WD11,Genbank:YP_002347827.1,GeneID:1175717;gbkey=CDS;gene=hscB;product=co-chaperone HscB;protein_id=YP_002347827.1;transl_table=11
NC_003143.1	RefSeq	gene	3237937	3238260	.	-	.	ID=gene2793;Name=iscA;Dbxref=GeneID:1175718;gbkey=Gene;gene=iscA;locus_tag=YPO2894
NC_003143.1	RefSeq	CDS	3237937	3238260	.	-	0	ID=cds2665;Name=YP_002347828.1;Parent=gene2793;Note=forms iron-sulfur clusters of ferredoxin %5B2FE-2S%5D%3B binds iron in the presence of the thioredoxin reductase system%3B forms homodimers and tetramers%3B similar to SufA protein;Dbxref=InterPro:IPR000361,InterPro:IPR011302,UniProtKB%2FTrEMBL:Q0WD10,Genbank:YP_002347828.1,GeneID:1175718;gbkey=CDS;gene=iscA;product=iron-sulfur cluster assembly protein;protein_id=YP_002347828.1;transl_table=11
NC_003143.1	RefSeq	region	3237946	3237999	.	-	.	ID=id2109;Note=PS01152 Hypothetical hesB%2FyadR%2FyfhF family signature.;Dbxref=GeneID:1175718;gbkey=misc_feature;gene=iscA
NC_003143.1	RefSeq	gene	3238530	3238916	.	-	.	ID=gene2794;Name=nifU;Dbxref=GeneID:1175719;gbkey=Gene;gene=nifU;locus_tag=YPO2895
NC_003143.1	RefSeq	CDS	3238530	3238916	.	-	0	ID=cds2666;Name=YP_002347829.1;Parent=gene2794;Dbxref=InterPro:IPR002871,InterPro:IPR011339,UniProtKB%2FTrEMBL:Q7CJN6,Genbank:YP_002347829.1,GeneID:1175719;gbkey=CDS;gene=nifU;product=scaffold protein;protein_id=YP_002347829.1;transl_table=11
NC_003143.1	RefSeq	gene	3238947	3240176	.	-	.	ID=gene2795;Name=iscS;Dbxref=GeneID:1175720;gbkey=Gene;gene=iscS;gene_synonym=nifS,yfhO;locus_tag=YPO2896
NC_003143.1	RefSeq	CDS	3238947	3240176	.	-	0	ID=cds2667;Name=YP_002347830.1;Parent=gene2795;Note=catalyzes the removal of elemental sulfur from cysteine to produce alanine%3B involved in NAD biosynthesis;Dbxref=InterPro:IPR000192,InterPro:IPR010240,UniProtKB%2FTrEMBL:Q7CJN7,Genbank:YP_002347830.1,GeneID:1175720;gbkey=CDS;gene=iscS;product=cysteine desulfurase;protein_id=YP_002347830.1;transl_table=11
NC_003143.1	RefSeq	region	3239514	3239573	.	-	.	ID=id2110;Note=PS00595 Aminotransferases class-V pyridoxal-phosphate attachment site.;Dbxref=GeneID:1175720;gbkey=misc_feature;gene=iscS
NC_003143.1	RefSeq	gene	3240230	3240724	.	-	.	ID=gene2796;Name=YPO2897;Dbxref=GeneID:1175721;gbkey=Gene;locus_tag=YPO2897
NC_003143.1	RefSeq	CDS	3240230	3240724	.	-	0	ID=cds2668;Name=YP_002347831.1;Parent=gene2796;Note=regulates the expression of the iscRSUA operon;Dbxref=InterPro:IPR000944,InterPro:IPR010242,InterPro:IPR011991,UniProtKB%2FTrEMBL:Q0WD07,Genbank:YP_002347831.1,GeneID:1175721;gbkey=CDS;product=DNA-binding transcriptional regulator IscR;protein_id=YP_002347831.1;transl_table=11
NC_003143.1	RefSeq	region	3240524	3240580	.	-	.	ID=id2111;Note=PS01332 Uncharacterized protein family UPF0074 signature.;Dbxref=GeneID:1175721;gbkey=misc_feature
NC_003143.1	RefSeq	region	3240584	3240649	.	-	.	ID=id2112;Note=Predicted helix-turn-helix motif with score 1222 %28%2B3.35 SD%29 at aa 26-47%2C sequence VPLADISERQGISLSYLEQLFS;Dbxref=GeneID:1175721;gbkey=misc_feature
NC_003143.1	RefSeq	gene	3240880	3241653	.	-	.	ID=gene2797;Name=YPO2898;Dbxref=GeneID:1175722;gbkey=Gene;locus_tag=YPO2898
NC_003143.1	RefSeq	CDS	3240880	3241653	.	-	0	ID=cds2669;Name=YP_002347832.1;Parent=gene2797;Dbxref=InterPro:IPR001537,InterPro:IPR004384,UniProtKB%2FTrEMBL:Q7CJN8,Genbank:YP_002347832.1,GeneID:1175722;gbkey=CDS;product=SpoU family rRNA methylase;protein_id=YP_002347832.1;transl_table=11
NC_003143.1	RefSeq	gene	3241772	3242575	.	+	.	ID=gene2798;Name=suhB;Dbxref=GeneID:1175723;gbkey=Gene;gene=suhB;locus_tag=YPO2899
NC_003143.1	RefSeq	CDS	3241772	3242575	.	+	0	ID=cds2670;Name=YP_002347833.1;Parent=gene2798;Dbxref=InterPro:IPR000760,UniProtKB%2FTrEMBL:Q7CJN9,Genbank:YP_002347833.1,GeneID:1175723;gbkey=CDS;gene=suhB;product=inositol monophosphatase;protein_id=YP_002347833.1;transl_table=11
NC_003143.1	RefSeq	region	3242012	3242053	.	+	.	ID=id2113;Note=PS00629 Inositol monophosphatase family signature 1.;Dbxref=GeneID:1175723;gbkey=misc_feature;gene=suhB
NC_003143.1	RefSeq	region	3242402	3242446	.	+	.	ID=id2114;Note=PS00630 Inositol monophosphatase family signature 2.;Dbxref=GeneID:1175723;gbkey=misc_feature;gene=suhB
NC_003143.1	RefSeq	repeat_region	3242634	3243345	.	+	.	ID=id2115;Note=Contains a %27G%27 at nucleotide position 315%7EIS200-like insertion sequence:IS1541;gbkey=repeat_region
NC_003143.1	RefSeq	gene	3242779	3243237	.	+	.	ID=gene2799;Name=tnp;Dbxref=GeneID:1175724;gbkey=Gene;gene=tnp;locus_tag=YPO2900
NC_003143.1	RefSeq	CDS	3242779	3243237	.	+	0	ID=cds2671;Name=YP_002347834.1;Parent=gene2799;Dbxref=InterPro:IPR002686,UniProtKB%2FTrEMBL:Q74YM6,Genbank:YP_002347834.1,GeneID:1175724;gbkey=CDS;gene=tnp;product=transposase for the IS1541 insertion element;protein_id=YP_002347834.1;transl_table=11
NC_003143.1	RefSeq	gene	3243384	3244406	.	-	.	ID=gene2800;Name=YPO2901;Dbxref=GeneID:1175725;gbkey=Gene;locus_tag=YPO2901
NC_003143.1	RefSeq	CDS	3243384	3244406	.	-	0	ID=cds2672;Name=YP_002347835.1;Parent=gene2800;Dbxref=InterPro:IPR011541,UniProtKB%2FTrEMBL:Q0WD03,Genbank:YP_002347835.1,GeneID:1175725;gbkey=CDS;product=hypothetical protein;protein_id=YP_002347835.1;transl_table=11
NC_003143.1	RefSeq	gene	3244397	3245071	.	-	.	ID=gene2801;Name=YPO2902;Dbxref=GeneID:1175726;gbkey=Gene;locus_tag=YPO2902
NC_003143.1	RefSeq	CDS	3244397	3245071	.	-	0	ID=cds2673;Name=YP_002347836.1;Parent=gene2801;Dbxref=InterPro:IPR010412,UniProtKB%2FTrEMBL:Q7CJP0,Genbank:YP_002347836.1,GeneID:1175726;gbkey=CDS;product=hypothetical protein;protein_id=YP_002347836.1;transl_table=11
NC_003143.1	RefSeq	region	3244985	3245050	.	-	.	ID=id2116;Note=1 probable transmembrane helix predicted;Dbxref=GeneID:1175726;gbkey=misc_feature
NC_003143.1	RefSeq	gene	3245213	3246574	.	+	.	ID=gene2802;Name=YPO2903;Dbxref=GeneID:1175727;gbkey=Gene;locus_tag=YPO2903
NC_003143.1	RefSeq	CDS	3245213	3246574	.	+	0	ID=cds2674;Name=YP_002347837.1;Parent=gene2802;Dbxref=InterPro:IPR011608,UniProtKB%2FTrEMBL:Q74SP2,Genbank:YP_002347837.1,GeneID:1175727;gbkey=CDS;product=stationary phase inducible protein CsiE;protein_id=YP_002347837.1;transl_table=11
NC_003143.1	RefSeq	gene	3246571	3247728	.	-	.	ID=gene2803;Name=hcaT;Dbxref=GeneID:1175728;gbkey=Gene;gene=hcaT;locus_tag=YPO2904
NC_003143.1	RefSeq	CDS	3246571	3247728	.	-	0	ID=cds2675;Name=YP_002347838.1;Parent=gene2803;Note=transporter of 3-phenylpropionate across the inner membrane%3B member of the major facilitator superfamily of transporters;Dbxref=InterPro:IPR011701,UniProtKB%2FTrEMBL:Q7CJP1,Genbank:YP_002347838.1,GeneID:1175728;gbkey=CDS;gene=hcaT;product=3-phenylpropionic acid transporter;protein_id=YP_002347838.1;transl_table=11
NC_003143.1	RefSeq	gene	3248080	3248628	.	-	.	ID=gene2804;Name=ail;Dbxref=GeneID:1175729;gbkey=Gene;gene=ail;locus_tag=YPO2905
NC_003143.1	RefSeq	CDS	3248080	3248628	.	-	0	ID=cds2676;Name=YP_002347839.1;Parent=gene2804;Dbxref=InterPro:IPR000758,UniProtKB%2FTrEMBL:Q0WCZ9,Genbank:YP_002347839.1,GeneID:1175729;gbkey=CDS;gene=ail;product=attachment invasion locus protein;protein_id=YP_002347839.1;transl_table=11
NC_003143.1	RefSeq	region	3248083	3248109	.	-	.	ID=id2117;Note=PS00695 Enterobacterial virulence outer membrane protein signature 2.;Dbxref=GeneID:1175729;gbkey=misc_feature;gene=ail
NC_003143.1	RefSeq	region	3248443	3248469	.	-	.	ID=id2118;Note=PS00694 Enterobacterial virulence outer membrane protein signature 1.;Dbxref=GeneID:1175729;gbkey=misc_feature;gene=ail
NC_003143.1	RefSeq	region	3248759	3248824	.	-	.	ID=id2119;Note=1 probable transmembrane helix predicted;gbkey=misc_feature
NC_003143.1	RefSeq	gene	3249072	3250325	.	-	.	ID=gene2805;Name=glyA;Dbxref=GeneID:1175731;gbkey=Gene;gene=glyA;locus_tag=YPO2907
NC_003143.1	RefSeq	CDS	3249072	3250325	.	-	0	ID=cds2677;Name=YP_002347841.1;Parent=gene2805;Note=catalyzes the reaction of glycine with 5%2C10-methylenetetrahydrofolate to form L-serine and tetrahydrofolate;Dbxref=InterPro:IPR001085,UniProtKB%2FTrEMBL:Q0WCZ7,Genbank:YP_002347841.1,GeneID:1175731;gbkey=CDS;gene=glyA;product=serine hydroxymethyltransferase;protein_id=YP_002347841.1;transl_table=11
NC_003143.1	RefSeq	region	3249615	3249665	.	-	.	ID=id2120;Note=PS00096 Serine hydroxymethyltransferase pyridoxal-phosphate attachment site.;Dbxref=GeneID:1175731;gbkey=misc_feature;gene=glyA
NC_003143.1	RefSeq	gene	3250866	3252056	.	+	.	ID=gene2806;Name=hmp;Dbxref=GeneID:1175732;gbkey=Gene;gene=hmp;gene_synonym=hmpA,hmpX;locus_tag=YPO2908
NC_003143.1	RefSeq	CDS	3250866	3252056	.	+	0	ID=cds2678;Name=YP_002347842.1;Parent=gene2806;Note=flavohemoprotein%3B catalyzes the formation of nitrate from nitric oxide%3B can also catalyze the reduction of dihydropteridine;Dbxref=InterPro:IPR000971,InterPro:IPR001221,InterPro:IPR001433,InterPro:IPR001709,InterPro:IPR008333,InterPro:IPR009050,InterPro:IPR012292,UniProtKB%2FTrEMBL:Q0WCZ6,Genbank:YP_002347842.1,GeneID:1175732;gbkey=CDS;gene=hmp;product=nitric oxide dioxygenase;protein_id=YP_002347842.1;transl_table=11
NC_003143.1	RefSeq	gene	3252487	3253417	.	+	.	ID=gene2807;Name=YPO2909;Dbxref=GeneID:1175733;gbkey=Gene;locus_tag=YPO2909;pseudo=true
NC_003143.1	RefSeq	gene	3253589	3253927	.	-	.	ID=gene2808;Name=glnB;Dbxref=GeneID:1175734;gbkey=Gene;gene=glnB;locus_tag=YPO2911
NC_003143.1	RefSeq	CDS	3253589	3253927	.	-	0	ID=cds2679;Name=YP_002347843.1;Parent=gene2808;Note=indirectly regulates nitrogen metabolism%3B at high nitrogen levels P-II prevents the phosphorylation of NR-I%2C the transcriptional activator of the glutamine synthetase gene %28glnA%29%3B at low nitrogen levels P-II is uridylylated to form PII-UMP and interacts with an adenylyltransferase %28GlnE%29 that activates GlnA;Dbxref=InterPro:IPR002187,InterPro:IPR002332,UniProtKB%2FTrEMBL:Q7CJP6,Genbank:YP_002347843.1,GeneID:1175734;gbkey=CDS;gene=glnB;product=nitrogen regulatory protein P-II 1;protein_id=YP_002347843.1;transl_table=11
NC_003143.1	RefSeq	region	3253640	3253681	.	-	.	ID=id2121;Note=PS00638 P-II protein C-terminal region signature.;Dbxref=GeneID:1175734;gbkey=misc_feature;gene=glnB
NC_003143.1	RefSeq	region	3253775	3253792	.	-	.	ID=id2122;Note=PS00496 P-II protein urydylation site.;Dbxref=GeneID:1175734;gbkey=misc_feature;gene=glnB
NC_003143.1	RefSeq	gene	3253942	3255564	.	-	.	ID=gene2809;Name=nadE;Dbxref=GeneID:1175735;gbkey=Gene;gene=nadE;locus_tag=YPO2912
NC_003143.1	RefSeq	CDS	3253942	3255564	.	-	0	ID=cds2680;Name=YP_002347844.1;Parent=gene2809;Note=NH%283%29-dependent%3B catalyzes the formation of nicotinamide adenine dinucleotide %28NAD%29 from nicotinic acid adenine dinucleotide %28NAAD%29 using either ammonia or glutamine as the amide donor and ATP%3B ammonia-utilizing enzymes include the ones from Bacillus and Escherichia coli while glutamine-utilizing enzymes include the Mycobacterial one%3B forms homodimers;Dbxref=InterPro:IPR000132,InterPro:IPR003010,InterPro:IPR003694,UniProtKB%2FTrEMBL:Q7CJP7,Genbank:YP_002347844.1,GeneID:1175735;gbkey=CDS;gene=nadE;product=NAD synthetase;protein_id=YP_002347844.1;transl_table=11
NC_003143.1	RefSeq	region	3255409	3255456	.	-	.	ID=id2123;Note=PS00920 Nitrilases %2F cyanide hydratase signature 1.;Dbxref=GeneID:1175735;gbkey=misc_feature;gene=nadE
NC_003143.1	RefSeq	gene	3255724	3257061	.	-	.	ID=gene2810;Name=YPO2914;Dbxref=GeneID:1175736;gbkey=Gene;locus_tag=YPO2914
NC_003143.1	RefSeq	CDS	3255724	3257061	.	-	0	ID=cds2681;Name=YP_002347845.1;Parent=gene2810;Dbxref=InterPro:IPR001789,InterPro:IPR002078,InterPro:IPR002197,InterPro:IPR003593,InterPro:IPR009057,InterPro:IPR011006,UniProtKB%2FTrEMBL:Q74SP9,Genbank:YP_002347845.1,GeneID:1175736;gbkey=CDS;product=two-component system response regulator;protein_id=YP_002347845.1;transl_table=11
NC_003143.1	RefSeq	region	3255985	3256014	.	-	.	ID=id2124;Note=PS00688 Sigma-54 interaction domain C-terminal part signature.;Dbxref=GeneID:1175736;gbkey=misc_feature
NC_003143.1	RefSeq	region	3256348	3256395	.	-	.	ID=id2125;Note=PS00676 Sigma-54 interaction domain ATP-binding region B signature.;Dbxref=GeneID:1175736;gbkey=misc_feature
NC_003143.1	RefSeq	region	3256540	3256581	.	-	.	ID=id2126;Note=PS00675 Sigma-54 interaction domain ATP-binding region A signature.;Dbxref=GeneID:1175736;gbkey=misc_feature
NC_003143.1	RefSeq	gene	3257024	3258019	.	-	.	ID=gene2811;Name=YPO2915;Dbxref=GeneID:1175737;gbkey=Gene;locus_tag=YPO2915
NC_003143.1	RefSeq	CDS	3257024	3258019	.	-	0	ID=cds2682;Name=YP_002347846.1;Parent=gene2811;Dbxref=UniProtKB%2FTrEMBL:Q0WCZ2,Genbank:YP_002347846.1,GeneID:1175737;gbkey=CDS;product=hypothetical protein;protein_id=YP_002347846.1;transl_table=11
NC_003143.1	RefSeq	region	3257942	3257974	.	-	.	ID=id2127;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site.;Dbxref=GeneID:1175737;gbkey=misc_feature
NC_003143.1	RefSeq	gene	3258095	3259546	.	-	.	ID=gene2812;Name=YPO2916;Dbxref=GeneID:1175738;gbkey=Gene;locus_tag=YPO2916
NC_003143.1	RefSeq	CDS	3258095	3259546	.	-	0	ID=cds2683;Name=YP_002347847.1;Parent=gene2812;Dbxref=InterPro:IPR003594,InterPro:IPR003660,InterPro:IPR003661,InterPro:IPR004358,InterPro:IPR005467,InterPro:IPR009082,UniProtKB%2FTrEMBL:Q7CJP8,Genbank:YP_002347847.1,GeneID:1175738;gbkey=CDS;product=two-component system sensor kinase;protein_id=YP_002347847.1;transl_table=11
NC_003143.1	RefSeq	repeat_region	3259644	3260355	.	-	.	ID=id2128;Note=Contains a %27A%27 at nucleotide position 315%7EIS200-like insertion sequence:IS1541;gbkey=repeat_region
NC_003143.1	RefSeq	gene	3259752	3260210	.	-	.	ID=gene2813;Name=tnp;Dbxref=GeneID:1175739;gbkey=Gene;gene=tnp;locus_tag=YPO2917
NC_003143.1	RefSeq	CDS	3259752	3260210	.	-	0	ID=cds2684;Name=YP_002347848.1;Parent=gene2813;Dbxref=InterPro:IPR002686,UniProtKB%2FTrEMBL:Q56938,Genbank:YP_002347848.1,GeneID:1175739;gbkey=CDS;gene=tnp;product=transposase for the IS1541 insertion element;protein_id=YP_002347848.1;transl_table=11
NC_003143.1	RefSeq	gene	3261437	3261997	.	+	.	ID=gene2814;Name=YPO2918;Dbxref=GeneID:1175740;gbkey=Gene;locus_tag=YPO2918
NC_003143.1	RefSeq	CDS	3261437	3261997	.	+	0	ID=cds2685;Name=YP_002347849.1;Parent=gene2814;Dbxref=UniProtKB%2FTrEMBL:Q7CJQ0,Genbank:YP_002347849.1,GeneID:1175740;gbkey=CDS;product=hypothetical protein;protein_id=YP_002347849.1;transl_table=11
NC_003143.1	RefSeq	gene	3263310	3267200	.	-	.	ID=gene2815;Name=purL;Dbxref=GeneID:1175742;gbkey=Gene;gene=purL;locus_tag=YPO2921
NC_003143.1	RefSeq	CDS	3263310	3267200	.	-	0	ID=cds2686;Name=YP_002347851.1;Parent=gene2815;Note=catalyzes the formation of 2-%28formamido%29-N1-%285-phospho-D-ribosyl%29acetamidine from N2-formyl-N1-%285-phospho-D-ribosyl%29glycinamide and L-glutamine in purine biosynthesis;Dbxref=InterPro:IPR000728,InterPro:IPR010073,InterPro:IPR010918,InterPro:IPR012998,UniProtKB%2FTrEMBL:Q0WCY7,Genbank:YP_002347851.1,GeneID:1175742;gbkey=CDS;gene=purL;product=phosphoribosylformylglycinamidine synthase;protein_id=YP_002347851.1;transl_table=11
NC_003143.1	RefSeq	gene	3267516	3268976	.	+	.	ID=gene2816;Name=YPO2922;Dbxref=GeneID:1175743;gbkey=Gene;locus_tag=YPO2922
NC_003143.1	RefSeq	CDS	3267516	3268976	.	+	0	ID=cds2687;Name=YP_002347852.1;Parent=gene2816;Note=YfhD%3B uncharacterized member of the transglycosylase slt family%3B part of the rob operon%2C which plays a role in cellular resistance to antibiotics%2C bactericidal agents%2C and organic solvents%3B unknown function;Dbxref=InterPro:IPR000189,InterPro:IPR001638,InterPro:IPR008258,UniProtKB%2FTrEMBL:Q74SQ6,Genbank:YP_002347852.1,GeneID:1175743;gbkey=CDS;product=transglycosylase;protein_id=YP_002347852.1;transl_table=11
NC_003143.1	RefSeq	region	3267531	3267599	.	+	.	ID=id2129;Note=1 probable transmembrane helix predicted;Dbxref=GeneID:1175743;gbkey=misc_feature
NC_003143.1	RefSeq	region	3268440	3268526	.	+	.	ID=id2130;Note=PS00922 Prokaryotic transglycosylases signature.;Dbxref=GeneID:1175743;gbkey=misc_feature
NC_003143.1	RefSeq	gene	3269085	3269687	.	-	.	ID=gene2817;Name=YPO2923;Dbxref=GeneID:1175744;gbkey=Gene;locus_tag=YPO2923
NC_003143.1	RefSeq	CDS	3269085	3269687	.	-	0	ID=cds2688;Name=YP_002347853.2;Parent=gene2817;Dbxref=InterPro:IPR002125,UniProtKB%2FTrEMBL:Q0WCY5,Genbank:YP_002347853.2,GeneID:1175744;gbkey=CDS;product=tRNA-specific adenosine deaminase;protein_id=YP_002347853.2;transl_table=11
NC_003143.1	RefSeq	region	3269316	3269429	.	-	.	ID=id2131;Note=PS00903 Cytidine and deoxycytidylate deaminases zinc-binding region signature.;Dbxref=GeneID:1175744;gbkey=misc_feature
NC_003143.1	RefSeq	gene	3269758	3270405	.	-	.	ID=gene2818;Name=yfhB;Dbxref=GeneID:1175745;gbkey=Gene;gene=yfhB;locus_tag=YPO2924
NC_003143.1	RefSeq	CDS	3269758	3270405	.	-	0	ID=cds2689;Name=YP_002347854.1;Parent=gene2818;Dbxref=InterPro:IPR006435,UniProtKB%2FTrEMBL:Q0WCY4,Genbank:YP_002347854.1,GeneID:1175745;gbkey=CDS;gene=yfhB;product=hypothetical protein;protein_id=YP_002347854.1;transl_table=11
NC_003143.1	RefSeq	region	3270226	3270291	.	-	.	ID=id2132;Note=1 probable transmembrane helix predicted;Dbxref=GeneID:1175745;gbkey=misc_feature;gene=yfhB
NC_003143.1	RefSeq	gene	3270680	3271567	.	-	.	ID=gene2819;Name=murQ;Dbxref=GeneID:1175746;gbkey=Gene;gene=murQ;locus_tag=YPO2925
NC_003143.1	RefSeq	CDS	3270680	3271567	.	-	0	ID=cds2690;Name=YP_002347855.1;Parent=gene2819;Note=catalyzes the cleavage of the lactyl ether moiety of N-acetylmuramic acid-6-phosphate %28MurNAc-6-P%29 to form N-acetylglucosamine-6-phosphate %28GlcNAc-6-P%29 and lactate%3B involved in MurNAc dissimilation pathway;Dbxref=InterPro:IPR001347,InterPro:IPR005486,InterPro:IPR005488,UniProtKB%2FTrEMBL:Q0WCY3,Genbank:YP_002347855.1,GeneID:1175746;gbkey=CDS;gene=murQ;product=N-acetylmuramic acid-6-phosphate etherase;protein_id=YP_002347855.1;transl_table=11
NC_003143.1	RefSeq	region	3270962	3271015	.	-	.	ID=id2133;Note=PS01272 Glucokinase regulatory protein family signature.;Dbxref=GeneID:1175746;gbkey=misc_feature;gene=murQ
NC_003143.1	RefSeq	gene	3271775	3272614	.	+	.	ID=gene2820;Name=YPO2926;Dbxref=GeneID:1175747;gbkey=Gene;locus_tag=YPO2926
NC_003143.1	RefSeq	CDS	3271775	3272614	.	+	0	ID=cds2691;Name=YP_002347856.1;Parent=gene2820;Dbxref=InterPro:IPR000281,InterPro:IPR001347,InterPro:IPR011991,UniProtKB%2FTrEMBL:Q7CJQ2,Genbank:YP_002347856.1,GeneID:1175747;gbkey=CDS;product=DNA-binding transcriptional regulator;protein_id=YP_002347856.1;transl_table=11
NC_003143.1	RefSeq	region	3271877	3271942	.	+	.	ID=id2134;Note=Predicted helix-turn-helix motif with score 1342 %28%2B3.76 SD%29 at aa 35-56%2C sequence LSSQKLAQQTGVSQSAVVKFAQ;Dbxref=GeneID:1175747;gbkey=misc_feature
NC_003143.1	RefSeq	gene	3272776	3273036	.	+	.	ID=gene2821;Name=fdx;Dbxref=GeneID:1175748;gbkey=Gene;gene=fdx;locus_tag=YPO2927
NC_003143.1	RefSeq	CDS	3272776	3273036	.	+	0	ID=cds2692;Name=YP_002347857.1;Parent=gene2821;Dbxref=InterPro:IPR001450,UniProtKB%2FTrEMBL:Q7CJQ3,Genbank:YP_002347857.1,GeneID:1175748;gbkey=CDS;gene=fdx;product=%5B4Fe-4S%5D ferredoxin;protein_id=YP_002347857.1;transl_table=11
NC_003143.1	RefSeq	region	3272800	3272835	.	+	.	ID=id2135;Note=PS00198 4Fe-4S ferredoxins%2C iron-sulfur binding region signature.;Dbxref=GeneID:1175748;gbkey=misc_feature;gene=fdx
NC_003143.1	RefSeq	repeat_region	3273084	3273795	.	-	.	ID=id2136;Note=Contains a %27G%27 at nucleotide position 315%7EIS200-like insertion sequence:IS1541;gbkey=repeat_region
NC_003143.1	RefSeq	gene	3273192	3273650	.	-	.	ID=gene2822;Name=tnp;Dbxref=GeneID:1175749;gbkey=Gene;gene=tnp;locus_tag=YPO2928
NC_003143.1	RefSeq	CDS	3273192	3273650	.	-	0	ID=cds2693;Name=YP_002347858.1;Parent=gene2822;Dbxref=InterPro:IPR002686,UniProtKB%2FTrEMBL:Q74YM6,Genbank:YP_002347858.1,GeneID:1175749;gbkey=CDS;gene=tnp;product=transposase for the IS1541 insertion element;protein_id=YP_002347858.1;transl_table=11
NC_003143.1	RefSeq	gene	3273852	3274232	.	-	.	ID=gene2823;Name=acpS;Dbxref=GeneID:1175750;gbkey=Gene;gene=acpS;gene_synonym=dpj;locus_tag=YPO2929
NC_003143.1	RefSeq	CDS	3273852	3274232	.	-	0	ID=cds2694;Name=YP_002347859.1;Parent=gene2823;Note=Catalyzes the formation of holo-ACP%2C which mediates the essential transfer of acyl fatty acid intermediates during the biosynthesis of fatty acids and lipids;Dbxref=InterPro:IPR002582,InterPro:IPR004568,InterPro:IPR008278,UniProtKB%2FTrEMBL:Q0WCX9,Genbank:YP_002347859.1,GeneID:1175750;gbkey=CDS;gene=acpS;product=4%27-phosphopantetheinyl transferase;protein_id=YP_002347859.1;transl_table=11
NC_003143.1	RefSeq	gene	3274232	3274963	.	-	.	ID=gene2824;Name=pdxJ;Dbxref=GeneID:1175751;gbkey=Gene;gene=pdxJ;locus_tag=YPO2930
NC_003143.1	RefSeq	CDS	3274232	3274963	.	-	0	ID=cds2695;Name=YP_002347860.1;Parent=gene2824;Note=involved in the de novo synthesis of pyridoxine %28Vitamin B6%29;Dbxref=InterPro:IPR004569,UniProtKB%2FTrEMBL:Q0WCX8,Genbank:YP_002347860.1,GeneID:1175751;gbkey=CDS;gene=pdxJ;product=pyridoxine 5%27-phosphate synthase;protein_id=YP_002347860.1;transl_table=11
NC_003143.1	RefSeq	repeat_region	3275087	3277040	.	-	.	ID=id2137;Note=insertion sequence:IS100;gbkey=repeat_region
NC_003143.1	RefSeq	repeat_region	3275087	3275114	.	+	.	ID=id2138;Note=IS100 inverted repeat;gbkey=repeat_region
NC_003143.1	RefSeq	gene	3275153	3275935	.	-	.	ID=gene2825;Name=YPO2931;Note=ypmt1.57c;Dbxref=GeneID:1175752;gbkey=Gene;locus_tag=YPO2931
NC_003143.1	RefSeq	CDS	3275153	3275935	.	-	0	ID=cds2696;Name=YP_002347861.1;Parent=gene2825;Dbxref=InterPro:IPR001270,InterPro:IPR002611,InterPro:IPR003593,UniProtKB%2FTrEMBL:Q7ARK4,Genbank:YP_002347861.1,GeneID:1175752;gbkey=CDS;product=transposase%2FIS protein;protein_id=YP_002347861.1;transl_table=11
NC_003143.1	RefSeq	region	3275585	3275608	.	-	.	ID=id2139;Note=PS00017 ATP%2FGTP-binding site motif A %28P-loop%29.;Dbxref=GeneID:1175752;gbkey=misc_feature
NC_003143.1	RefSeq	gene	3275932	3276954	.	-	.	ID=gene2826;Name=y1093;Dbxref=GeneID:1175753;gbkey=Gene;gene=y1093;gene_synonym=ypmt1;locus_tag=YPO2932
NC_003143.1	RefSeq	CDS	3275932	3276954	.	-	0	ID=cds2697;Name=YP_002347862.1;Parent=gene2826;Dbxref=InterPro:IPR001584,InterPro:IPR006120,InterPro:IPR009057,InterPro:IPR012287,InterPro:IPR012337,UniProtKB%2FTrEMBL:Q7ARN5,Genbank:YP_002347862.1,GeneID:1175753;gbkey=CDS;gene=y1093;product=transposase for insertion sequence IS100;protein_id=YP_002347862.1;transl_table=11
NC_003143.1	RefSeq	region	3276838	3276903	.	-	.	ID=id2140;Note=Predicted helix-turn-helix motif with score 2147 %28%2B6.50 SD%29 at aa 18-39%2C sequence MSSRAIARELGISRNTVKRYLQ;Dbxref=GeneID:1175753;gbkey=misc_feature;gene=y1093
NC_003143.1	RefSeq	gene	3276968	3277636	.	-	.	ID=gene2827;Name=YPO2933;Dbxref=GeneID:1175754;gbkey=Gene;locus_tag=YPO2933;pseudo=true
NC_003143.1	RefSeq	repeat_region	3277013	3277040	.	-	.	ID=id2141;Note=IS100 inverted repeat;Dbxref=GeneID:1175754;gbkey=repeat_region
NC_003143.1	RefSeq	gene	3277633	3278982	.	-	.	ID=gene2828;Name=YPO2934;Dbxref=GeneID:1175755;gbkey=Gene;locus_tag=YPO2934
NC_003143.1	RefSeq	CDS	3277633	3278982	.	-	0	ID=cds2698;Name=YP_002347863.1;Parent=gene2828;Dbxref=InterPro:IPR010263,UniProtKB%2FTrEMBL:Q7CJC9,Genbank:YP_002347863.1,GeneID:1175755;gbkey=CDS;product=hypothetical protein;protein_id=YP_002347863.1;transl_table=11
NC_003143.1	RefSeq	gene	3278986	3279546	.	-	.	ID=gene2829;Name=YPO2935;Dbxref=GeneID:1175756;gbkey=Gene;locus_tag=YPO2935
NC_003143.1	RefSeq	CDS	3278986	3279546	.	-	0	ID=cds2699;Name=YP_002347864.1;Parent=gene2829;Dbxref=UniProtKB%2FTrEMBL:Q0WCX4,Genbank:YP_002347864.1,GeneID:1175756;gbkey=CDS;product=hypothetical protein;protein_id=YP_002347864.1;transl_table=11
NC_003143.1	RefSeq	gene	3279799	3280284	.	-	.	ID=gene2830;Name=YPO2937;Dbxref=GeneID:1175757;gbkey=Gene;locus_tag=YPO2937
NC_003143.1	RefSeq	CDS	3279799	3280284	.	-	0	ID=cds2700;Name=YP_002347865.1;Parent=gene2830;Dbxref=InterPro:IPR008514,UniProtKB%2FTrEMBL:Q0WCX3,Genbank:YP_002347865.1,GeneID:1175757;gbkey=CDS;product=hypothetical protein;protein_id=YP_002347865.1;transl_table=11
NC_003143.1	RefSeq	gene	3280610	3282112	.	-	.	ID=gene2831;Name=YPO2938;Dbxref=GeneID:1175758;gbkey=Gene;locus_tag=YPO2938
NC_003143.1	RefSeq	CDS	3280610	3282112	.	-	0	ID=cds2701;Name=YP_002347866.1;Parent=gene2831;Dbxref=InterPro:IPR010269,UniProtKB%2FTrEMBL:Q0WCX2,Genbank:YP_002347866.1,GeneID:1175758;gbkey=CDS;product=hypothetical protein;protein_id=YP_002347866.1;transl_table=11
NC_003143.1	RefSeq	gene	3282136	3282660	.	-	.	ID=gene2832;Name=YPO2939;Dbxref=GeneID:1175759;gbkey=Gene;locus_tag=YPO2939
NC_003143.1	RefSeq	CDS	3282136	3282660	.	-	0	ID=cds2702;Name=YP_002347867.1;Parent=gene2832;Dbxref=InterPro:IPR008312,UniProtKB%2FTrEMBL:Q0WCX1,Genbank:YP_002347867.1,GeneID:1175759;gbkey=CDS;product=hypothetical protein;protein_id=YP_002347867.1;transl_table=11
NC_003143.1	RefSeq	gene	3282765	3283319	.	-	.	ID=gene2833;Name=YPO2940;Dbxref=GeneID:1175760;gbkey=Gene;locus_tag=YPO2940
NC_003143.1	RefSeq	CDS	3282765	3283319	.	-	0	ID=cds2703;Name=YP_002347868.1;Parent=gene2833;Dbxref=InterPro:IPR000259,InterPro:IPR008966,UniProtKB%2FTrEMBL:Q0WCX0,Genbank:YP_002347868.1,GeneID:1175760;gbkey=CDS;product=fimbrial protein;protein_id=YP_002347868.1;transl_table=11
NC_003143.1	RefSeq	repeat_region	3284502	3285816	.	+	.	ID=id2142;Note=insertion sequence:IS285;gbkey=repeat_region
NC_003143.1	RefSeq	repeat_region	3284502	3284530	.	+	.	ID=id2143;Note=IS285 inverted repeat;gbkey=repeat_region
NC_003143.1	RefSeq	gene	3284573	3285781	.	+	.	ID=gene2834;Name=y1062;Dbxref=GeneID:1175762;gbkey=Gene;gene=y1062;gene_synonym=ypmt1.80C;locus_tag=YPO2942
NC_003143.1	RefSeq	CDS	3284573	3285781	.	+	0	ID=cds2704;Name=YP_002347869.1;Parent=gene2834;Dbxref=InterPro:IPR001207,UniProtKB%2FTrEMBL:Q7ARB0,Genbank:YP_002347869.1,GeneID:1175762;gbkey=CDS;gene=y1062;product=transposase for the IS285 insertion element;protein_id=YP_002347869.1;transl_table=11
NC_003143.1	RefSeq	region	3285266	3285340	.	+	.	ID=id2144;Note=PS01007 Transposases%2C Mutator family%2C signature.;Dbxref=GeneID:1175762;gbkey=misc_feature;gene=y1062
NC_003143.1	RefSeq	repeat_region	3285788	3285816	.	-	.	ID=id2145;Note=IS285 inverted repeat;gbkey=repeat_region
NC_003143.1	RefSeq	gene	3287481	3288260	.	-	.	ID=gene2835;Name=YPO2944;Dbxref=GeneID:1175763;gbkey=Gene;locus_tag=YPO2944
NC_003143.1	RefSeq	CDS	3287481	3288260	.	-	0	ID=cds2705;Name=YP_002347870.1;Parent=gene2835;Dbxref=InterPro:IPR001829,InterPro:IPR008962,UniProtKB%2FTrEMBL:Q7CJD1,Genbank:YP_002347870.1,GeneID:1175763;gbkey=CDS;product=pili chaperone protein;protein_id=YP_002347870.1;transl_table=11
NC_003143.1	RefSeq	region	3287895	3287948	.	-	.	ID=id2146;Note=PS00635 Gram-negative pili assembly chaperone signature.;Dbxref=GeneID:1175763;gbkey=misc_feature
NC_003143.1	RefSeq	gene	3288399	3288944	.	-	.	ID=gene2836;Name=YPO2945;Dbxref=GeneID:1175764;gbkey=Gene;locus_tag=YPO2945
NC_003143.1	RefSeq	CDS	3288399	3288944	.	-	0	ID=cds2706;Name=YP_002347871.1;Parent=gene2836;Dbxref=InterPro:IPR000259,InterPro:IPR008966,UniProtKB%2FTrEMBL:Q306M1,Genbank:YP_002347871.1,GeneID:1175764;gbkey=CDS;product=frimbrial protein;protein_id=YP_002347871.1;transl_table=11
NC_003143.1	RefSeq	gene	3289145	3291820	.	-	.	ID=gene2837;Name=clpB5;Dbxref=GeneID:1175765;gbkey=Gene;gene=clpB5;locus_tag=YPO2946
NC_003143.1	RefSeq	CDS	3289145	3291820	.	-	0	ID=cds2707;Name=YP_002347872.1;Parent=gene2837;Dbxref=InterPro:IPR001270,InterPro:IPR003593,InterPro:IPR003959,InterPro:IPR004176,InterPro:IPR013093,UniProtKB%2FTrEMBL:Q0WCW6,Genbank:YP_002347872.1,GeneID:1175765;gbkey=CDS;gene=clpB5;product=Clp ATPase;protein_id=YP_002347872.1;transl_table=11
NC_003143.1	RefSeq	region	3289919	3289942	.	-	.	ID=id2147;Note=PS00017 ATP%2FGTP-binding site motif A %28P-loop%29.;Dbxref=GeneID:1175765;gbkey=misc_feature;gene=clpB5
NC_003143.1	RefSeq	region	3290813	3290851	.	-	.	ID=id2148;Note=PS00870 Chaperonins clpA%2FB signature 1.;Dbxref=GeneID:1175765;gbkey=misc_feature;gene=clpB5
NC_003143.1	RefSeq	region	3291092	3291115	.	-	.	ID=id2149;Note=PS00017 ATP%2FGTP-binding site motif A %28P-loop%29.;Dbxref=GeneID:1175765;gbkey=misc_feature;gene=clpB5
NC_003143.1	RefSeq	gene	3292603	3294483	.	+	.	ID=gene2838;Name=YPO2947;Dbxref=GeneID:1175766;gbkey=Gene;locus_tag=YPO2947
NC_003143.1	RefSeq	CDS	3292603	3294483	.	+	0	ID=cds2708;Name=YP_002347873.1;Parent=gene2838;Dbxref=InterPro:IPR010272,UniProtKB%2FTrEMBL:Q7CJD2,Genbank:YP_002347873.1,GeneID:1175766;gbkey=CDS;product=hypothetical protein;protein_id=YP_002347873.1;transl_table=11
NC_003143.1	RefSeq	gene	3294483	3295508	.	+	.	ID=gene2839;Name=YPO2948;Dbxref=GeneID:1175767;gbkey=Gene;locus_tag=YPO2948
NC_003143.1	RefSeq	CDS	3294483	3295508	.	+	0	ID=cds2709;Name=YP_002347874.1;Parent=gene2839;Dbxref=InterPro:IPR010732,UniProtKB%2FTrEMBL:Q74SM4,Genbank:YP_002347874.1,GeneID:1175767;gbkey=CDS;product=hypothetical protein;protein_id=YP_002347874.1;transl_table=11
NC_003143.1	RefSeq	gene	3295607	3296788	.	+	.	ID=gene2840;Name=YPO2949;Dbxref=GeneID:1175768;gbkey=Gene;locus_tag=YPO2949
NC_003143.1	RefSeq	CDS	3295607	3296788	.	+	0	ID=cds2710;Name=YP_002347875.1;Parent=gene2840;Dbxref=InterPro:IPR010657,UniProtKB%2FTrEMBL:Q74SM3,Genbank:YP_002347875.1,GeneID:1175768;gbkey=CDS;product=hypothetical protein;protein_id=YP_002347875.1;transl_table=11
NC_003143.1	RefSeq	gene	3296795	3297826	.	+	.	ID=gene2841;Name=YPO2950;Dbxref=GeneID:1175769;gbkey=Gene;locus_tag=YPO2950
NC_003143.1	RefSeq	CDS	3296795	3297826	.	+	0	ID=cds2711;Name=YP_002347876.1;Parent=gene2841;Dbxref=InterPro:IPR000259,InterPro:IPR008966,UniProtKB%2FTrEMBL:Q7CJD3,Genbank:YP_002347876.1,GeneID:1175769;gbkey=CDS;product=fimbrial protein;protein_id=YP_002347876.1;transl_table=11
NC_003143.1	RefSeq	gene	3297866	3299203	.	+	.	ID=gene2842;Name=YPO2951;Dbxref=GeneID:1175770;gbkey=Gene;locus_tag=YPO2951
NC_003143.1	RefSeq	CDS	3297866	3299203	.	+	0	ID=cds2712;Name=YP_002347877.1;Parent=gene2842;Note=no significant database hits;Dbxref=UniProtKB%2FTrEMBL:Q7CJD4,Genbank:YP_002347877.1,GeneID:1175770;gbkey=CDS;product=hypothetical protein;protein_id=YP_002347877.1;transl_table=11
NC_003143.1	RefSeq	gene	3299200	3299883	.	+	.	ID=gene2843;Name=YPO2952;Dbxref=GeneID:1175771;gbkey=Gene;locus_tag=YPO2952
NC_003143.1	RefSeq	CDS	3299200	3299883	.	+	0	ID=cds2713;Name=YP_002347878.1;Parent=gene2843;Dbxref=UniProtKB%2FTrEMBL:Q0WCW0,Genbank:YP_002347878.1,GeneID:1175771;gbkey=CDS;product=hypothetical protein;protein_id=YP_002347878.1;transl_table=11
NC_003143.1	RefSeq	region	3299800	3299853	.	+	.	ID=id2150;Note=1 probable transmembrane helix predicted;Dbxref=GeneID:1175771;gbkey=misc_feature
NC_003143.1	RefSeq	gene	3299884	3301566	.	+	.	ID=gene2844;Name=YPO2953;Dbxref=GeneID:1175772;gbkey=Gene;locus_tag=YPO2953
NC_003143.1	RefSeq	CDS	3299884	3301566	.	+	0	ID=cds2714;Name=YP_002347879.1;Parent=gene2844;Dbxref=InterPro:IPR006664,InterPro:IPR006665,UniProtKB%2FTrEMBL:Q7CJD5,Genbank:YP_002347879.1,GeneID:1175772;gbkey=CDS;product=hypothetical protein;protein_id=YP_002347879.1;transl_table=11
NC_003143.1	RefSeq	gene	3301563	3302045	.	+	.	ID=gene2845;Name=YPO2954;Dbxref=GeneID:1175773;gbkey=Gene;locus_tag=YPO2954
NC_003143.1	RefSeq	CDS	3301563	3302045	.	+	0	ID=cds2715;Name=YP_002347880.1;Parent=gene2845;Note=no significant database hits;Dbxref=UniProtKB%2FTrEMBL:Q7CJD6,Genbank:YP_002347880.1,GeneID:1175773;gbkey=CDS;product=hypothetical protein;protein_id=YP_002347880.1;transl_table=11
NC_003143.1	RefSeq	gene	3302403	3303005	.	-	.	ID=gene2846;Name=YPO2955;Dbxref=GeneID:1175774;gbkey=Gene;locus_tag=YPO2955
NC_003143.1	RefSeq	CDS	3302403	3303005	.	-	0	ID=cds2716;Name=YP_002347881.1;Parent=gene2846;Dbxref=InterPro:IPR000792,InterPro:IPR011991,UniProtKB%2FTrEMBL:Q7CJD7,Genbank:YP_002347881.1,GeneID:1175774;gbkey=CDS;product=LuxR family transcriptional regulator;protein_id=YP_002347881.1;transl_table=11
NC_003143.1	RefSeq	region	3302493	3302576	.	-	.	ID=id2151;Note=PS00622 Bacterial regulatory proteins%2C luxR family signature.;Dbxref=GeneID:1175774;gbkey=misc_feature
NC_003143.1	RefSeq	gene	3304260	3305372	.	-	.	ID=gene2847;Name=mltB;Dbxref=GeneID:1175775;gbkey=Gene;gene=mltB;locus_tag=YPO2957
NC_003143.1	RefSeq	CDS	3304260	3305372	.	-	0	ID=cds2717;Name=YP_002347882.1;Parent=gene2847;Note=membrane-bound lytic murein transglycosylase B%3B catalyzes the cleavage of the glycosidic bonds between N-acetylmuramic acid and N-acetylglucosamine in peptidoglycan;Dbxref=InterPro:IPR011757,UniProtKB%2FTrEMBL:Q7CJD8,Genbank:YP_002347882.1,GeneID:1175775;gbkey=CDS;gene=mltB;product=murein hydrolase B;protein_id=YP_002347882.1;transl_table=11
NC_003143.1	RefSeq	region	3305304	3305336	.	-	.	ID=id2152;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site.;Dbxref=GeneID:1175775;gbkey=misc_feature;gene=mltB
NC_003143.1	RefSeq	gene	3305683	3306702	.	+	.	ID=gene2848;Name=sfuA;Dbxref=GeneID:1175776;gbkey=Gene;gene=sfuA;gene_synonym=yfuA;locus_tag=YPO2958
NC_003143.1	RefSeq	CDS	3305683	3306702	.	+	0	ID=cds2718;Name=YP_002347883.1;Parent=gene2848;Dbxref=InterPro:IPR006059,InterPro:IPR006061,InterPro:IPR011587,UniProtKB%2FTrEMBL:Q7CJD9,Genbank:YP_002347883.1,GeneID:1175776;gbkey=CDS;gene=sfuA;product=iron%28III%29-binding protein;protein_id=YP_002347883.1;transl_table=11
NC_003143.1	RefSeq	region	3306058	3306111	.	+	.	ID=id2153;Note=PS01037 Bacterial extracellular solute-binding proteins%2C family 1 signature.;Dbxref=GeneID:1175776;gbkey=misc_feature;gene=sfuA
NC_003143.1	RefSeq	gene	3306758	3308344	.	+	.	ID=gene2849;Name=sfuB;Dbxref=GeneID:1175777;gbkey=Gene;gene=sfuB;gene_synonym=yfuB;locus_tag=YPO2959
NC_003143.1	RefSeq	CDS	3306758	3308344	.	+	0	ID=cds2719;Name=YP_002347884.1;Parent=gene2849;Dbxref=InterPro:IPR000515,UniProtKB%2FTrEMBL:Q0WCV4,Genbank:YP_002347884.1,GeneID:1175777;gbkey=CDS;gene=sfuB;product=iron ABC transporter permease;protein_id=YP_002347884.1;transl_table=11
NC_003143.1	RefSeq	gene	3308341	3309390	.	+	.	ID=gene2850;Name=sfuC;Dbxref=GeneID:1175778;gbkey=Gene;gene=sfuC;gene_synonym=yfuC;locus_tag=YPO2960
NC_003143.1	RefSeq	CDS	3308341	3309390	.	+	0	ID=cds2720;Name=YP_002347885.1;Parent=gene2850;Dbxref=InterPro:IPR003439,InterPro:IPR003593,InterPro:IPR008995,UniProtKB%2FTrEMBL:Q0WCV3,Genbank:YP_002347885.1,GeneID:1175778;gbkey=CDS;gene=sfuC;product=iron%28III%29-transport ATP-binding protein;protein_id=YP_002347885.1;transl_table=11
NC_003143.1	RefSeq	region	3308446	3308469	.	+	.	ID=id2154;Note=PS00017 ATP%2FGTP-binding site motif A %28P-loop%29.;Dbxref=GeneID:1175778;gbkey=misc_feature;gene=sfuC
NC_003143.1	RefSeq	region	3308746	3308790	.	+	.	ID=id2155;Note=PS00211 ABC transporters family signature.;Dbxref=GeneID:1175778;gbkey=misc_feature;gene=sfuC
NC_003143.1	RefSeq	gene	3309463	3309987	.	-	.	ID=gene2851;Name=YPO2961;Dbxref=GeneID:1175779;gbkey=Gene;locus_tag=YPO2961
NC_003143.1	RefSeq	CDS	3309463	3309987	.	-	0	ID=cds2721;Name=YP_002347886.1;Parent=gene2851;Dbxref=UniProtKB%2FTrEMBL:Q7CJE1,Genbank:YP_002347886.1,GeneID:1175779;gbkey=CDS;product=hypothetical protein;protein_id=YP_002347886.1;transl_table=11
NC_003143.1	RefSeq	gene	3310448	3310933	.	+	.	ID=gene2852;Name=YPO2962;Dbxref=GeneID:1175780;gbkey=Gene;locus_tag=YPO2962
NC_003143.1	RefSeq	CDS	3310448	3310933	.	+	0	ID=cds2722;Name=YP_002347887.1;Parent=gene2852;Dbxref=InterPro:IPR008514,UniProtKB%2FTrEMBL:Q7CJE2,Genbank:YP_002347887.1,GeneID:1175780;gbkey=CDS;product=hypothetical protein;protein_id=YP_002347887.1;transl_table=11
NC_003143.1	RefSeq	gene	3311163	3312011	.	-	.	ID=gene2853;Name=YPO2963;Dbxref=GeneID:1175781;gbkey=Gene;locus_tag=YPO2963
NC_003143.1	RefSeq	CDS	3311163	3312011	.	-	0	ID=cds2723;Name=YP_002347888.1;Parent=gene2853;Dbxref=UniProtKB%2FTrEMBL:Q7CJE3,Genbank:YP_002347888.1,GeneID:1175781;gbkey=CDS;product=hypothetical protein;protein_id=YP_002347888.1;transl_table=11
NC_003143.1	RefSeq	gene	3312842	3315268	.	+	.	ID=gene2854;Name=dmsA;Dbxref=GeneID:1175782;gbkey=Gene;gene=dmsA;locus_tag=YPO2965
NC_003143.1	RefSeq	CDS	3312842	3315268	.	+	0	ID=cds2724;Name=YP_002347889.1;Parent=gene2854;Dbxref=InterPro:IPR006311,InterPro:IPR006655,InterPro:IPR006656,InterPro:IPR006657,InterPro:IPR006963,InterPro:IPR009010,InterPro:IPR011888,UniProtKB%2FTrEMBL:Q0WCU9,Genbank:YP_002347889.1,GeneID:1175782;gbkey=CDS;gene=dmsA;product=dimethyl sulfoxide reductase subunit A;protein_id=YP_002347889.1;transl_table=11
NC_003143.1	RefSeq	region	3313016	3313072	.	+	.	ID=id2156;Note=PS00551 Prokaryotic molybdopterin oxidoreductases signature 1.;Dbxref=GeneID:1175782;gbkey=misc_feature;gene=dmsA
NC_003143.1	RefSeq	gene	3315280	3315897	.	+	.	ID=gene2855;Name=dmsB;Dbxref=GeneID:1175783;gbkey=Gene;gene=dmsB;locus_tag=YPO2966
NC_003143.1	RefSeq	CDS	3315280	3315897	.	+	0	ID=cds2725;Name=YP_002347890.1;Parent=gene2855;Dbxref=InterPro:IPR001450,UniProtKB%2FTrEMBL:Q7CJE4,Genbank:YP_002347890.1,GeneID:1175783;gbkey=CDS;gene=dmsB;product=dimethyl sulfoxide reductase subunit B;protein_id=YP_002347890.1;transl_table=11
NC_003143.1	RefSeq	region	3315574	3315609	.	+	.	ID=id2157;Note=PS00198 4Fe-4S ferredoxins%2C iron-sulfur binding region signature.;Dbxref=GeneID:1175783;gbkey=misc_feature;gene=dmsB
NC_003143.1	RefSeq	gene	3315899	3316675	.	+	.	ID=gene2856;Name=dmsC;Dbxref=GeneID:1175784;gbkey=Gene;gene=dmsC;locus_tag=YPO2967
NC_003143.1	RefSeq	CDS	3315899	3316675	.	+	0	ID=cds2726;Name=YP_002347891.1;Parent=gene2856;Dbxref=InterPro:IPR007059,UniProtKB%2FTrEMBL:Q0WCU7,Genbank:YP_002347891.1,GeneID:1175784;gbkey=CDS;gene=dmsC;product=dimethyl sulfoxide reductase subunit C;protein_id=YP_002347891.1;transl_table=11
NC_003143.1	RefSeq	gene	3317088	3317753	.	+	.	ID=gene2857;Name=YPO2968;Dbxref=GeneID:1175785;gbkey=Gene;locus_tag=YPO2968
NC_003143.1	RefSeq	CDS	3317088	3317753	.	+	0	ID=cds2727;Name=YP_002347892.1;Parent=gene2857;Dbxref=InterPro:IPR010395,UniProtKB%2FTrEMBL:Q0WCU6,Genbank:YP_002347892.1,GeneID:1175785;gbkey=CDS;product=hypothetical protein;protein_id=YP_002347892.1;transl_table=11
NC_003143.1	RefSeq	gene	3317750	3318319	.	+	.	ID=gene2858;Name=YPO2969;Dbxref=GeneID:1175786;gbkey=Gene;locus_tag=YPO2969
NC_003143.1	RefSeq	CDS	3317750	3318319	.	+	0	ID=cds2728;Name=YP_002347893.1;Parent=gene2858;Dbxref=InterPro:IPR001450,UniProtKB%2FTrEMBL:Q7CJE5,Genbank:YP_002347893.1,GeneID:1175786;gbkey=CDS;product=%28Fe-S%29-binding protein;protein_id=YP_002347893.1;transl_table=11
NC_003143.1	RefSeq	region	3317951	3317986	.	+	.	ID=id2158;Note=PS00198 4Fe-4S ferredoxins%2C iron-sulfur binding region signature.;Dbxref=GeneID:1175786;gbkey=misc_feature
NC_003143.1	RefSeq	region	3318257	3318292	.	+	.	ID=id2159;Note=PS00198 4Fe-4S ferredoxins%2C iron-sulfur binding region signature.;Dbxref=GeneID:1175786;gbkey=misc_feature
NC_003143.1	RefSeq	gene	3318565	3319221	.	-	.	ID=gene2859;Name=YPO2970;Dbxref=GeneID:1175787;gbkey=Gene;locus_tag=YPO2970
NC_003143.1	RefSeq	CDS	3318565	3319221	.	-	0	ID=cds2729;Name=YP_002347894.1;Parent=gene2859;Dbxref=InterPro:IPR008517,UniProtKB%2FTrEMBL:Q7CJE6,Genbank:YP_002347894.1,GeneID:1175787;gbkey=CDS;product=lipoprotein;protein_id=YP_002347894.1;transl_table=11
NC_003143.1	RefSeq	region	3319165	3319197	.	-	.	ID=id2160;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site.;Dbxref=GeneID:1175787;gbkey=misc_feature
NC_003143.1	RefSeq	gene	3319218	3319574	.	-	.	ID=gene2860;Name=YPO2971;Dbxref=GeneID:1175788;gbkey=Gene;locus_tag=YPO2971
NC_003143.1	RefSeq	CDS	3319218	3319574	.	-	0	ID=cds2730;Name=YP_002347895.1;Parent=gene2860;Dbxref=UniProtKB%2FTrEMBL:Q0WCU3,Genbank:YP_002347895.1,GeneID:1175788;gbkey=CDS;product=lipoprotein;protein_id=YP_002347895.1;transl_table=11
NC_003143.1	RefSeq	region	3319518	3319550	.	-	.	ID=id2161;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site.;Dbxref=GeneID:1175788;gbkey=misc_feature
NC_003143.1	RefSeq	gene	3319601	3320272	.	-	.	ID=gene2861;Name=YPO2972;Dbxref=GeneID:1175789;gbkey=Gene;locus_tag=YPO2972
NC_003143.1	RefSeq	CDS	3319601	3320272	.	-	0	ID=cds2731;Name=YP_002347896.1;Parent=gene2861;Dbxref=InterPro:IPR005534,UniProtKB%2FTrEMBL:Q0WCU2,Genbank:YP_002347896.1,GeneID:1175789;gbkey=CDS;product=lipoprotein;protein_id=YP_002347896.1;transl_table=11
NC_003143.1	RefSeq	region	3319838	3319861	.	-	.	ID=id2162;Note=PS00017 ATP%2FGTP-binding site motif A %28P-loop%29.;Dbxref=GeneID:1175789;gbkey=misc_feature
NC_003143.1	RefSeq	region	3320213	3320245	.	-	.	ID=id2163;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site.;Dbxref=GeneID:1175789;gbkey=misc_feature
NC_003143.1	RefSeq	gene	3320862	3321293	.	+	.	ID=gene2862;Name=YPO2973;Dbxref=GeneID:1175790;gbkey=Gene;locus_tag=YPO2973
NC_003143.1	RefSeq	CDS	3320862	3321293	.	+	0	ID=cds2732;Name=YP_002347897.1;Parent=gene2862;Dbxref=UniProtKB%2FTrEMBL:Q0WCU1,Genbank:YP_002347897.1,GeneID:1175790;gbkey=CDS;product=hypothetical protein;protein_id=YP_002347897.1;transl_table=11
NC_003143.1	RefSeq	gene	3321388	3321912	.	-	.	ID=gene2863;Name=YPO2974;Dbxref=GeneID:1175791;gbkey=Gene;locus_tag=YPO2974
NC_003143.1	RefSeq	CDS	3321388	3321912	.	-	0	ID=cds2733;Name=YP_002347898.1;Parent=gene2863;Dbxref=InterPro:IPR011577,UniProtKB%2FTrEMBL:Q0WCU0,Genbank:YP_002347898.1,GeneID:1175791;gbkey=CDS;product=B-type cytochrome;protein_id=YP_002347898.1;transl_table=11
NC_003143.1	RefSeq	gene	3322157	3323392	.	-	.	ID=gene2864;Name=YPO2975;Dbxref=GeneID:1175792;gbkey=Gene;locus_tag=YPO2975
NC_003143.1	RefSeq	CDS	3322157	3323392	.	-	0	ID=cds2734;Name=YP_002347899.1;Parent=gene2864;Dbxref=InterPro:IPR004839,UniProtKB%2FTrEMBL:Q7CJE7,Genbank:YP_002347899.1,GeneID:1175792;gbkey=CDS;product=aminotransferase;protein_id=YP_002347899.1;transl_table=11
NC_003143.1	RefSeq	region	3322178	3322201	.	-	.	ID=id2164;Note=PS00017 ATP%2FGTP-binding site motif A %28P-loop%29.;Dbxref=GeneID:1175792;gbkey=misc_feature
NC_003143.1	RefSeq	gene	3323658	3324905	.	+	.	ID=gene2865;Name=YPO2976;Dbxref=GeneID:1175793;gbkey=Gene;locus_tag=YPO2976
NC_003143.1	RefSeq	CDS	3323658	3324905	.	+	0	ID=cds2735;Name=YP_002347900.1;Parent=gene2865;Dbxref=InterPro:IPR010856,UniProtKB%2FTrEMBL:Q7CJE8,Genbank:YP_002347900.1,GeneID:1175793;gbkey=CDS;product=hypothetical protein;protein_id=YP_002347900.1;transl_table=11
NC_003143.1	RefSeq	gene	3324983	3325954	.	-	.	ID=gene2866;Name=glk;Dbxref=GeneID:1175794;gbkey=Gene;gene=glk;locus_tag=YPO2977
NC_003143.1	RefSeq	CDS	3324983	3325954	.	-	0	ID=cds2736;Name=YP_002347901.1;Parent=gene2866;Note=catalyzes the conversion of ATP and D-glucose to ADP and D-glucose 6-phosphate;Dbxref=InterPro:IPR003836,UniProtKB%2FTrEMBL:Q0WCT7,Genbank:YP_002347901.1,GeneID:1175794;gbkey=CDS;gene=glk;product=glucokinase;protein_id=YP_002347901.1;transl_table=11
NC_003143.1	RefSeq	gene	3326135	3326662	.	-	.	ID=gene2867;Name=YPO2978;Dbxref=GeneID:1175795;gbkey=Gene;locus_tag=YPO2978
NC_003143.1	RefSeq	CDS	3326135	3326662	.	-	0	ID=cds2737;Name=YP_002347902.1;Parent=gene2867;Dbxref=InterPro:IPR007896,UniProtKB%2FTrEMBL:Q7CJE9,Genbank:YP_002347902.1,GeneID:1175795;gbkey=CDS;product=hypothetical protein;protein_id=YP_002347902.1;transl_table=11
NC_003143.1	RefSeq	gene	3326714	3327592	.	+	.	ID=gene2868;Name=YPO2979;Dbxref=GeneID:1175796;gbkey=Gene;locus_tag=YPO2979
NC_003143.1	RefSeq	CDS	3326714	3327592	.	+	0	ID=cds2738;Name=YP_002347903.1;Parent=gene2868;Dbxref=InterPro:IPR000847,InterPro:IPR005119,InterPro:IPR011991,UniProtKB%2FTrEMBL:Q7CJF0,Genbank:YP_002347903.1,GeneID:1175796;gbkey=CDS;product=LysR family transcriptional regulator;protein_id=YP_002347903.1;transl_table=11
NC_003143.1	RefSeq	region	3326765	3326830	.	+	.	ID=id2165;Note=Predicted helix-turn-helix motif with score 1575 %28%2B4.55 SD%29 at aa 18-39%2C sequence GSFSAAARKLRKSQSTISTAIA;Dbxref=GeneID:1175796;gbkey=misc_feature
NC_003143.1	RefSeq	gene	3327728	3328717	.	+	.	ID=gene2869;Name=YPO2980;Dbxref=GeneID:1175797;gbkey=Gene;locus_tag=YPO2980
NC_003143.1	RefSeq	CDS	3327728	3328717	.	+	0	ID=cds2739;Name=YP_002347904.1;Parent=gene2869;Dbxref=InterPro:IPR001395,InterPro:IPR005399,UniProtKB%2FTrEMBL:Q0WCT4,Genbank:YP_002347904.1,GeneID:1175797;gbkey=CDS;product=ion channel protein;protein_id=YP_002347904.1;transl_table=11
NC_003143.1	RefSeq	gene	3328888	3329301	.	+	.	ID=gene2870;Name=YPO2981;Dbxref=GeneID:1175798;gbkey=Gene;locus_tag=YPO2981
NC_003143.1	RefSeq	CDS	3328888	3329301	.	+	0	ID=cds2740;Name=YP_002347905.1;Parent=gene2870;Dbxref=UniProtKB%2FTrEMBL:Q0WCT3,Genbank:YP_002347905.1,GeneID:1175798;gbkey=CDS;product=hypothetical protein;protein_id=YP_002347905.1;transl_table=11
NC_003143.1	RefSeq	gene	3329394	3330623	.	-	.	ID=gene2871;Name=mntH;Dbxref=GeneID:1175799;gbkey=Gene;gene=mntH;locus_tag=YPO2982
NC_003143.1	RefSeq	CDS	3329394	3330623	.	-	0	ID=cds2741;Name=YP_002347906.1;Parent=gene2871;Dbxref=InterPro:IPR001046,UniProtKB%2FTrEMBL:Q0WCT2,Genbank:YP_002347906.1,GeneID:1175799;gbkey=CDS;gene=mntH;product=manganese transport protein MntH;protein_id=YP_002347906.1;transl_table=11
NC_003143.1	RefSeq	gene	3331058	3332242	.	+	.	ID=gene2872;Name=cru;Dbxref=GeneID:1175800;gbkey=Gene;gene=cru;gene_synonym=nupC;locus_tag=YPO2983
NC_003143.1	RefSeq	CDS	3331058	3332242	.	+	0	ID=cds2742;Name=YP_002347907.1;Parent=gene2872;Dbxref=InterPro:IPR002668,InterPro:IPR008276,InterPro:IPR011642,InterPro:IPR011657,UniProtKB%2FTrEMBL:Q7CJF1,Genbank:YP_002347907.1,GeneID:1175800;gbkey=CDS;gene=cru;product=nucleoside permease;protein_id=YP_002347907.1;transl_table=11
NC_003143.1	RefSeq	gene	3332619	3332694	.	-	.	ID=gene2873;Name=YPt_39;Dbxref=GeneID:1175801;gbkey=Gene;locus_tag=YPt_39
NC_003143.1	RefSeq	tRNA	3332619	3332694	.	-	.	ID=rna54;Parent=gene2873;Note=tRNA Lys anticodon TTT%2C Cove score 95.27;Dbxref=GeneID:1175801;gbkey=tRNA;product=tRNA-Lys
NC_003143.1	RefSeq	exon	3332619	3332694	.	-	.	ID=id2166;Parent=rna54;Note=tRNA Lys anticodon TTT%2C Cove score 95.27;Dbxref=GeneID:1175801;gbkey=tRNA;product=tRNA-Lys
NC_003143.1	RefSeq	gene	3332894	3332969	.	-	.	ID=gene2874;Name=YPt_40;Dbxref=GeneID:1175802;gbkey=Gene;locus_tag=YPt_40
NC_003143.1	RefSeq	tRNA	3332894	3332969	.	-	.	ID=rna55;Parent=gene2874;Note=tRNA Val anticodon TAC%2C Cove score 90.85;Dbxref=GeneID:1175802;gbkey=tRNA;product=tRNA-Val
NC_003143.1	RefSeq	exon	3332894	3332969	.	-	.	ID=id2167;Parent=rna55;Note=tRNA Val anticodon TAC%2C Cove score 90.85;Dbxref=GeneID:1175802;gbkey=tRNA;product=tRNA-Val
NC_003143.1	RefSeq	gene	3333014	3333089	.	-	.	ID=gene2875;Name=YPt_41;Dbxref=GeneID:1175803;gbkey=Gene;locus_tag=YPt_41
NC_003143.1	RefSeq	tRNA	3333014	3333089	.	-	.	ID=rna56;Parent=gene2875;Note=tRNA Val anticodon TAC%2C Cove score 90.85;Dbxref=GeneID:1175803;gbkey=tRNA;product=tRNA-Val
NC_003143.1	RefSeq	exon	3333014	3333089	.	-	.	ID=id2168;Parent=rna56;Note=tRNA Val anticodon TAC%2C Cove score 90.85;Dbxref=GeneID:1175803;gbkey=tRNA;product=tRNA-Val
NC_003143.1	RefSeq	gene	3333126	3333201	.	-	.	ID=gene2876;Name=YPt_42;Dbxref=GeneID:1175804;gbkey=Gene;locus_tag=YPt_42
NC_003143.1	RefSeq	tRNA	3333126	3333201	.	-	.	ID=rna57;Parent=gene2876;Note=tRNA Val anticodon TAC%2C Cove score 90.85;Dbxref=GeneID:1175804;gbkey=tRNA;product=tRNA-Val
NC_003143.1	RefSeq	exon	3333126	3333201	.	-	.	ID=id2169;Parent=rna57;Note=tRNA Val anticodon TAC%2C Cove score 90.85;Dbxref=GeneID:1175804;gbkey=tRNA;product=tRNA-Val
NC_003143.1	RefSeq	gene	3333476	3334891	.	+	.	ID=gene2877;Name=gltX;Dbxref=GeneID:1175805;gbkey=Gene;gene=gltX;locus_tag=YPO2984
NC_003143.1	RefSeq	CDS	3333476	3334891	.	+	0	ID=cds2743;Name=YP_002347908.1;Parent=gene2877;Note=Charges one glutamine molecule and pairs it to its corresponding RNA trinucleotide during protein translation;Dbxref=InterPro:IPR000924,InterPro:IPR001412,InterPro:IPR004527,InterPro:IPR008925,UniProtKB%2FTrEMBL:Q0WCT0,Genbank:YP_002347908.1,GeneID:1175805;gbkey=CDS;gene=gltX;product=glutamyl-tRNA synthetase;protein_id=YP_002347908.1;transl_table=11
NC_003143.1	RefSeq	region	3333500	3333535	.	+	.	ID=id2170;Note=PS00178 Aminoacyl-transfer RNA synthetases class-I signature.;Dbxref=GeneID:1175805;gbkey=misc_feature;gene=gltX
NC_003143.1	RefSeq	repeat_region	3334939	3335650	.	+	.	ID=id2171;Note=Contains a %27G%27 at nucleotide position 315%7EIS200-like insertion sequence:IS1541;gbkey=repeat_region
NC_003143.1	RefSeq	gene	3335084	3335542	.	+	.	ID=gene2878;Name=tnp;Dbxref=GeneID:1175806;gbkey=Gene;gene=tnp;locus_tag=YPO2985
NC_003143.1	RefSeq	CDS	3335084	3335542	.	+	0	ID=cds2744;Name=YP_002347909.1;Parent=gene2878;Dbxref=InterPro:IPR002686,UniProtKB%2FTrEMBL:Q74YM6,Genbank:YP_002347909.1,GeneID:1175806;gbkey=CDS;gene=tnp;product=transposase for the IS1541 insertion element;protein_id=YP_002347909.1;transl_table=11
NC_003143.1	RefSeq	gene	3335833	3335908	.	+	.	ID=gene2879;Name=YPt_43;Dbxref=GeneID:1175807;gbkey=Gene;locus_tag=YPt_43
NC_003143.1	RefSeq	tRNA	3335833	3335908	.	+	.	ID=rna58;Parent=gene2879;Note=tRNA Ala anticodon GGC%2C Cove score 86.95;Dbxref=GeneID:1175807;gbkey=tRNA;product=tRNA-Ala
NC_003143.1	RefSeq	exon	3335833	3335908	.	+	.	ID=id2172;Parent=rna58;Note=tRNA Ala anticodon GGC%2C Cove score 86.95;Dbxref=GeneID:1175807;gbkey=tRNA;product=tRNA-Ala
NC_003143.1	RefSeq	gene	3335986	3336061	.	+	.	ID=gene2880;Name=YPt_44;Dbxref=GeneID:1175808;gbkey=Gene;locus_tag=YPt_44
NC_003143.1	RefSeq	tRNA	3335986	3336061	.	+	.	ID=rna59;Parent=gene2880;Note=tRNA Ala anticodon GGC%2C Cove score 86.95;Dbxref=GeneID:1175808;gbkey=tRNA;product=tRNA-Ala
NC_003143.1	RefSeq	exon	3335986	3336061	.	+	.	ID=id2173;Parent=rna59;Note=tRNA Ala anticodon GGC%2C Cove score 86.95;Dbxref=GeneID:1175808;gbkey=tRNA;product=tRNA-Ala
NC_003143.1	RefSeq	gene	3336256	3336861	.	+	.	ID=gene2881;Name=YPO2986;Dbxref=GeneID:1175809;gbkey=Gene;locus_tag=YPO2986
NC_003143.1	RefSeq	CDS	3336256	3336861	.	+	0	ID=cds2745;Name=YP_002347910.1;Parent=gene2881;Dbxref=InterPro:IPR009267,UniProtKB%2FTrEMBL:Q0WCS8,Genbank:YP_002347910.1,GeneID:1175809;gbkey=CDS;product=hypothetical protein;protein_id=YP_002347910.1;transl_table=11
NC_003143.1	RefSeq	gene	3336993	3337340	.	+	.	ID=gene2882;Name=YPO2987;Dbxref=GeneID:1175810;gbkey=Gene;locus_tag=YPO2987
NC_003143.1	RefSeq	CDS	3336993	3337340	.	+	0	ID=cds2746;Name=YP_002347911.1;Parent=gene2882;Dbxref=UniProtKB%2FTrEMBL:Q0WCS7,Genbank:YP_002347911.1,GeneID:1175810;gbkey=CDS;product=hypothetical protein;protein_id=YP_002347911.1;transl_table=11
NC_003143.1	RefSeq	gene	3337441	3337656	.	-	.	ID=gene2883;Name=YPO2988;Dbxref=GeneID:1175811;gbkey=Gene;locus_tag=YPO2988
NC_003143.1	RefSeq	CDS	3337441	3337656	.	-	0	ID=cds2747;Name=YP_002347912.1;Parent=gene2883;Dbxref=UniProtKB%2FTrEMBL:Q0WCS6,Genbank:YP_002347912.1,GeneID:1175811;gbkey=CDS;product=hypothetical protein;protein_id=YP_002347912.1;transl_table=11
NC_003143.1	RefSeq	gene	3337676	3339688	.	-	.	ID=gene2884;Name=ligA;Dbxref=GeneID:1175812;gbkey=Gene;gene=ligA;gene_synonym=lig,ligA,lop,pdeC;locus_tag=YPO2989
NC_003143.1	RefSeq	CDS	3337676	3339688	.	-	0	ID=cds2748;Name=YP_002347913.1;Parent=gene2884;Note=this protein catalyzes the formation of phosphodiester linkages between 5%27-phosphoryl and 3%27-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction%3B essential for DNA replication and repair of damaged DNA%3B similar to ligase LigB;Dbxref=InterPro:IPR000445,InterPro:IPR001357,InterPro:IPR001679,InterPro:IPR003583,InterPro:IPR004149,InterPro:IPR004150,InterPro:IPR008994,InterPro:IPR010994,InterPro:IPR013839,InterPro:IPR013840,UniProtKB%2FTrEMBL:Q7CJF3,Genbank:YP_002347913.1,GeneID:1175812;gbkey=CDS;gene=ligA;product=NAD-dependent DNA ligase LigA;protein_id=YP_002347913.1;transl_table=11
NC_003143.1	RefSeq	region	3338651	3338698	.	-	.	ID=id2174;Note=PS01056 NAD-dependent DNA ligase signature 2.;Dbxref=GeneID:1175812;gbkey=misc_feature;gene=ligA
NC_003143.1	RefSeq	region	3339257	3339346	.	-	.	ID=id2175;Note=PS01055 NAD-dependent DNA ligase signature 1.;Dbxref=GeneID:1175812;gbkey=misc_feature;gene=ligA
NC_003143.1	RefSeq	gene	3339779	3340765	.	-	.	ID=gene2885;Name=zipA;Dbxref=GeneID:1175813;gbkey=Gene;gene=zipA;locus_tag=YPO2990
NC_003143.1	RefSeq	CDS	3339779	3340765	.	-	0	ID=cds2749;Name=YP_002347914.1;Parent=gene2885;Note=interacts with cell division protein FitsZ and may be required to anchor septal ring structure;Dbxref=InterPro:IPR007449,InterPro:IPR011919,UniProtKB%2FTrEMBL:Q0WCS4,Genbank:YP_002347914.1,GeneID:1175813;gbkey=CDS;gene=zipA;product=cell division protein ZipA;protein_id=YP_002347914.1;transl_table=11
NC_003143.1	RefSeq	region	3340688	3340744	.	-	.	ID=id2176;Note=1 probable transmembrane helix predicted;Dbxref=GeneID:1175813;gbkey=misc_feature;gene=zipA
NC_003143.1	RefSeq	gene	3341014	3341748	.	+	.	ID=gene2886;Name=cysZ;Dbxref=GeneID:1175814;gbkey=Gene;gene=cysZ;locus_tag=YPO2991
NC_003143.1	RefSeq	CDS	3341014	3341748	.	+	0	ID=cds2750;Name=YP_002347915.1;Parent=gene2886;Note=role in sulfur assimilation;Dbxref=InterPro:IPR007496,UniProtKB%2FTrEMBL:Q7CJF4,Genbank:YP_002347915.1,GeneID:1175814;gbkey=CDS;gene=cysZ;product=sulfate transport protein CysZ;protein_id=YP_002347915.1;transl_table=11
NC_003143.1	RefSeq	gene	3341905	3342873	.	+	.	ID=gene2887;Name=cysK;Dbxref=GeneID:1175815;gbkey=Gene;gene=cysK;gene_synonym=cysZ;locus_tag=YPO2992
NC_003143.1	RefSeq	CDS	3341905	3342873	.	+	0	ID=cds2751;Name=YP_002347916.1;Parent=gene2887;Note=CysK%3B forms a complex with serine acetyltransferase CysE%3B functions in cysteine biosynthesis;Dbxref=InterPro:IPR001216,InterPro:IPR001926,InterPro:IPR005856,InterPro:IPR005859,UniProtKB%2FTrEMBL:Q7CJF5,Genbank:YP_002347916.1,GeneID:1175815;gbkey=CDS;gene=cysK;product=cysteine synthase A;protein_id=YP_002347916.1;transl_table=11
NC_003143.1	RefSeq	region	3341995	3342051	.	+	.	ID=id2177;Note=PS00901 Cysteine synthase%2Fcystathionine beta-synthase P-phosphate attachment site.;Dbxref=GeneID:1175815;gbkey=misc_feature;gene=cysK
NC_003143.1	RefSeq	gene	3343372	3343629	.	+	.	ID=gene2888;Name=ptsH;Dbxref=GeneID:1175816;gbkey=Gene;gene=ptsH;locus_tag=YPO2993
NC_003143.1	RefSeq	CDS	3343372	3343629	.	+	0	ID=cds2752;Name=YP_002347917.1;Parent=gene2888;Dbxref=InterPro:IPR000032,InterPro:IPR001020,InterPro:IPR002114,InterPro:IPR005698,UniProtKB%2FTrEMBL:Q7CJF6,Genbank:YP_002347917.1,GeneID:1175816;gbkey=CDS;gene=ptsH;product=PTS system phosphohistidinoprotein-hexose phosphotransferase subunit Hpr;protein_id=YP_002347917.1;transl_table=11
NC_003143.1	RefSeq	region	3343408	3343431	.	+	.	ID=id2178;Note=PS00369 PTS HPR component histidine phosphorylation site signature.;Dbxref=GeneID:1175816;gbkey=misc_feature;gene=ptsH
NC_003143.1	RefSeq	region	3343486	3343533	.	+	.	ID=id2179;Note=PS00589 PTS HPR component serine phosphorylation site signature.;Dbxref=GeneID:1175816;gbkey=misc_feature;gene=ptsH
NC_003143.1	RefSeq	gene	3343678	3345405	.	+	.	ID=gene2889;Name=ptsI;Dbxref=GeneID:1175817;gbkey=Gene;gene=ptsI;locus_tag=YPO2994
NC_003143.1	RefSeq	CDS	3343678	3345405	.	+	0	ID=cds2753;Name=YP_002347918.1;Parent=gene2889;Note=Phosphotransferase system%2C enzyme I%3B transfers the phosphoryl group from phosphoenolpyruvate %28PEP%29 to the phosphoryl carrier protein%3B part of the phosphoenolpyruvate-dependent sugar phosphotransferase system %28PTS%29%2C a major carbohydrate active-transport system;Dbxref=InterPro:IPR000121,InterPro:IPR006318,InterPro:IPR008279,InterPro:IPR008731,UniProtKB%2FTrEMBL:Q7CJF7,Genbank:YP_002347918.1,GeneID:1175817;gbkey=CDS;gene=ptsI;product=phosphoenolpyruvate-protein phosphotransferase;protein_id=YP_002347918.1;transl_table=11
NC_003143.1	RefSeq	region	3344227	3344262	.	+	.	ID=id2180;Note=PS00370 PEP-utilizing enzymes phosphorylation site signature.;Dbxref=GeneID:1175817;gbkey=misc_feature;gene=ptsI
NC_003143.1	RefSeq	region	3345016	3345072	.	+	.	ID=id2181;Note=PS00742 PEP-utilizing enzymes signature 2.;Dbxref=GeneID:1175817;gbkey=misc_feature;gene=ptsI
NC_003143.1	RefSeq	gene	3345454	3345963	.	+	.	ID=gene2890;Name=crr;Dbxref=GeneID:1175818;gbkey=Gene;gene=crr;gene_synonym=gsr,iex,tgs,treD;locus_tag=YPO2995
NC_003143.1	RefSeq	CDS	3345454	3345963	.	+	0	ID=cds2754;Name=YP_002347919.1;Parent=gene2890;Note=functions in phosphoenolpyruvate-%28PEP%29-dependent phosphotransferase %28PTS%29 system%3B functions in the transport and phosphorylation of glucose;Dbxref=InterPro:IPR001127,InterPro:IPR011055,UniProtKB%2FTrEMBL:Q7CJF8,Genbank:YP_002347919.1,GeneID:1175818;gbkey=CDS;gene=crr;product=PTS system glucose-specific transporter subunit;protein_id=YP_002347919.1;transl_table=11
NC_003143.1	RefSeq	region	3345706	3345744	.	+	.	ID=id2182;Note=PS00371 PTS EIIA domains phosphorylation site signature 1.;Dbxref=GeneID:1175818;gbkey=misc_feature;gene=crr
NC_003143.1	RefSeq	repeat_region	3345998	3346709	.	-	.	ID=id2183;Note=Contains a %27A%27 at nucleotide position 315%7EIS200-like insertion sequence:IS1541;gbkey=repeat_region
NC_003143.1	RefSeq	gene	3346106	3346564	.	-	.	ID=gene2891;Name=tnp;Dbxref=GeneID:1175819;gbkey=Gene;gene=tnp;locus_tag=YPO2996
NC_003143.1	RefSeq	CDS	3346106	3346564	.	-	0	ID=cds2755;Name=YP_002347920.1;Parent=gene2891;Dbxref=InterPro:IPR002686,UniProtKB%2FTrEMBL:Q56938,Genbank:YP_002347920.1,GeneID:1175819;gbkey=CDS;gene=tnp;product=transposase for the IS1541 insertion element;protein_id=YP_002347920.1;transl_table=11
NC_003143.1	RefSeq	gene	3346834	3348183	.	-	.	ID=gene2892;Name=YPO2997;Dbxref=GeneID:1175820;gbkey=Gene;locus_tag=YPO2997
NC_003143.1	RefSeq	CDS	3346834	3348183	.	-	0	ID=cds2756;Name=YP_002347921.1;Parent=gene2892;Dbxref=InterPro:IPR003594,InterPro:IPR003660,InterPro:IPR003661,InterPro:IPR004358,InterPro:IPR005467,InterPro:IPR009082,UniProtKB%2FTrEMBL:Q7CJG0,Genbank:YP_002347921.1,GeneID:1175820;gbkey=CDS;product=two-component system sensor kinase;protein_id=YP_002347921.1;transl_table=11
NC_003143.1	RefSeq	gene	3348209	3348892	.	-	.	ID=gene2893;Name=YPO2998;Dbxref=GeneID:1175821;gbkey=Gene;locus_tag=YPO2998
NC_003143.1	RefSeq	CDS	3348209	3348892	.	-	0	ID=cds2757;Name=YP_002347922.1;Parent=gene2893;Dbxref=InterPro:IPR001789,InterPro:IPR001867,InterPro:IPR011006,InterPro:IPR011991,UniProtKB%2FTrEMBL:Q7CJG1,Genbank:YP_002347922.1,GeneID:1175821;gbkey=CDS;product=two-component system response regulator;protein_id=YP_002347922.1;transl_table=11
NC_003143.1	RefSeq	gene	3349080	3350285	.	+	.	ID=gene2894;Name=YPO2999;Dbxref=GeneID:1175822;gbkey=Gene;locus_tag=YPO2999
NC_003143.1	RefSeq	CDS	3349080	3350285	.	+	0	ID=cds2758;Name=YP_002347923.1;Parent=gene2894;Dbxref=InterPro:IPR006143,UniProtKB%2FTrEMBL:Q7CJG2,Genbank:YP_002347923.1,GeneID:1175822;gbkey=CDS;product=HlyD family secretion protein;protein_id=YP_002347923.1;transl_table=11
NC_003143.1	RefSeq	region	3349113	3349172	.	+	.	ID=id2184;Note=1 probable transmembrane helix predicted;Dbxref=GeneID:1175822;gbkey=misc_feature
NC_003143.1	RefSeq	gene	3350289	3352325	.	+	.	ID=gene2895;Name=YPO3000;Dbxref=GeneID:1175823;gbkey=Gene;locus_tag=YPO3000
NC_003143.1	RefSeq	CDS	3350289	3352325	.	+	0	ID=cds2759;Name=YP_002347924.1;Parent=gene2895;Dbxref=InterPro:IPR003439,InterPro:IPR003593,InterPro:IPR003838,UniProtKB%2FTrEMBL:Q7CJG3,Genbank:YP_002347924.1,GeneID:1175823;gbkey=CDS;product=ABC transporter ATP-binding protein;protein_id=YP_002347924.1;transl_table=11
NC_003143.1	RefSeq	region	3350427	3350450	.	+	.	ID=id2185;Note=PS00017 ATP%2FGTP-binding site motif A %28P-loop%29.;Dbxref=GeneID:1175823;gbkey=misc_feature
NC_003143.1	RefSeq	region	3350739	3350783	.	+	.	ID=id2186;Note=PS00211 ABC transporters family signature.;Dbxref=GeneID:1175823;gbkey=misc_feature
NC_003143.1	RefSeq	gene	3352580	3354226	.	-	.	ID=gene2896;Name=YPO3001;Dbxref=GeneID:1175824;gbkey=Gene;locus_tag=YPO3001
NC_003143.1	RefSeq	CDS	3352580	3354226	.	-	0	ID=cds2760;Name=YP_002347925.1;Parent=gene2896;Dbxref=InterPro:IPR001100,InterPro:IPR001327,InterPro:IPR001763,InterPro:IPR004099,InterPro:IPR013027,UniProtKB%2FTrEMBL:Q7CJG4,Genbank:YP_002347925.1,GeneID:1175824;gbkey=CDS;product=pyridine nucleotide-disulphide oxidoreductase;protein_id=YP_002347925.1;transl_table=11
NC_003143.1	RefSeq	gene	3354286	3355746	.	-	.	ID=gene2897;Name=YPO3002;Dbxref=GeneID:1175825;gbkey=Gene;locus_tag=YPO3002
NC_003143.1	RefSeq	CDS	3354286	3355746	.	-	0	ID=cds2761;Name=YP_002347926.1;Parent=gene2897;Dbxref=InterPro:IPR001734,UniProtKB%2FTrEMBL:Q7CJG5,Genbank:YP_002347926.1,GeneID:1175825;gbkey=CDS;product=permease;protein_id=YP_002347926.1;transl_table=11
NC_003143.1	RefSeq	gene	3355743	3355940	.	-	.	ID=gene2898;Name=YPO3003;Dbxref=GeneID:1175826;gbkey=Gene;locus_tag=YPO3003
NC_003143.1	RefSeq	CDS	3355743	3355940	.	-	0	ID=cds2762;Name=YP_002347927.1;Parent=gene2898;Dbxref=UniProtKB%2FTrEMBL:Q74SH6,Genbank:YP_002347927.1,GeneID:1175826;gbkey=CDS;product=hypothetical protein;protein_id=YP_002347927.1;transl_table=11
NC_003143.1	RefSeq	gene	3356083	3357054	.	-	.	ID=gene2899;Name=YPO3004;Dbxref=GeneID:1175827;gbkey=Gene;locus_tag=YPO3004
NC_003143.1	RefSeq	CDS	3356083	3357054	.	-	0	ID=cds2763;Name=YP_008853947.1;Parent=gene2899;Dbxref=Genbank:YP_008853947.1,GeneID:1175827;gbkey=CDS;product=hypothetical protein;protein_id=YP_008853947.1;transl_table=11
NC_003143.1	RefSeq	region	3357156	3357221	.	-	.	ID=id2187;Note=1 probable transmembrane helix predicted;gbkey=misc_feature
NC_003143.1	RefSeq	gene	3357336	3358517	.	-	.	ID=gene2900;Name=YPO3006;Dbxref=GeneID:1175828;gbkey=Gene;locus_tag=YPO3006
NC_003143.1	RefSeq	CDS	3357336	3358517	.	-	0	ID=cds2764;Name=YP_002347928.1;Parent=gene2900;Dbxref=InterPro:IPR001176,InterPro:IPR004839,UniProtKB%2FTrEMBL:Q0WCR0,Genbank:YP_002347928.1,GeneID:1175828;gbkey=CDS;product=aminotransferase;protein_id=YP_002347928.1;transl_table=11
NC_003143.1	RefSeq	gene	3359114	3360643	.	+	.	ID=gene2901;Name=YPO3007;Dbxref=GeneID:1175829;gbkey=Gene;locus_tag=YPO3007
NC_003143.1	RefSeq	CDS	3359114	3360643	.	+	0	ID=cds2765;Name=YP_002347929.1;Parent=gene2901;Dbxref=InterPro:IPR002035,UniProtKB%2FTrEMBL:Q7CJG6,Genbank:YP_002347929.1,GeneID:1175829;gbkey=CDS;product=hypothetical protein;protein_id=YP_002347929.1;transl_table=11
NC_003143.1	RefSeq	region	3359336	3359404	.	+	.	ID=id2188;Note=1 probable transmembrane helix predicted;Dbxref=GeneID:1175829;gbkey=misc_feature
NC_003143.1	RefSeq	gene	3360876	3362420	.	+	.	ID=gene2902;Name=YPO3008;Dbxref=GeneID:1175830;gbkey=Gene;locus_tag=YPO3008
NC_003143.1	RefSeq	CDS	3360876	3362420	.	+	0	ID=cds2766;Name=YP_002347930.1;Parent=gene2902;Dbxref=InterPro:IPR003594,InterPro:IPR003661,InterPro:IPR004358,InterPro:IPR005467,InterPro:IPR009082,UniProtKB%2FTrEMBL:Q7CJG7,Genbank:YP_002347930.1,GeneID:1175830;gbkey=CDS;product=two-component sensor histidine kinase;protein_id=YP_002347930.1;transl_table=11
NC_003143.1	RefSeq	gene	3362417	3363124	.	+	.	ID=gene2903;Name=YPO3009;Dbxref=GeneID:1175831;gbkey=Gene;locus_tag=YPO3009
NC_003143.1	RefSeq	CDS	3362417	3363124	.	+	0	ID=cds2767;Name=YP_002347931.1;Parent=gene2903;Dbxref=InterPro:IPR001789,InterPro:IPR001867,InterPro:IPR011006,UniProtKB%2FTrEMBL:Q0WCQ7,Genbank:YP_002347931.1,GeneID:1175831;gbkey=CDS;product=two-component response regulator;protein_id=YP_002347931.1;transl_table=11
NC_003143.1	RefSeq	gene	3363505	3364737	.	-	.	ID=gene2904;Name=YPO3010;Dbxref=GeneID:1175832;gbkey=Gene;locus_tag=YPO3010
NC_003143.1	RefSeq	CDS	3363505	3364737	.	-	0	ID=cds2768;Name=YP_002347932.1;Parent=gene2904;Dbxref=UniProtKB%2FTrEMBL:Q7CJG8,Genbank:YP_002347932.1,GeneID:1175832;gbkey=CDS;product=hypothetical protein;protein_id=YP_002347932.1;transl_table=11
NC_003143.1	RefSeq	gene	3364982	3365860	.	-	.	ID=gene2905;Name=cysM;Dbxref=GeneID:1175833;gbkey=Gene;gene=cysM;locus_tag=YPO3011
NC_003143.1	RefSeq	CDS	3364982	3365860	.	-	0	ID=cds2769;Name=YP_002347933.1;Parent=gene2905;Note=catalyzes the formation of cysteine from 3-O-acetyl-L-serine and hydrogen sulfide;Dbxref=InterPro:IPR001216,InterPro:IPR001926,InterPro:IPR005856,InterPro:IPR005858,UniProtKB%2FTrEMBL:Q7CJG9,Genbank:YP_002347933.1,GeneID:1175833;gbkey=CDS;gene=cysM;product=cysteine synthase B;protein_id=YP_002347933.1;transl_table=11
NC_003143.1	RefSeq	region	3365717	3365773	.	-	.	ID=id2189;Note=PS00901 Cysteine synthase%2Fcystathionine beta-synthase P-phosphate attachment site.;Dbxref=GeneID:1175833;gbkey=misc_feature;gene=cysM
NC_003143.1	RefSeq	gene	3366031	3367122	.	-	.	ID=gene2906;Name=cysA;Dbxref=GeneID:1175834;gbkey=Gene;gene=cysA;locus_tag=YPO3012
NC_003143.1	RefSeq	CDS	3366031	3367122	.	-	0	ID=cds2770;Name=YP_002347934.1;Parent=gene2906;Dbxref=InterPro:IPR003439,InterPro:IPR003593,InterPro:IPR005666,InterPro:IPR008995,UniProtKB%2FTrEMBL:Q0WCQ4,Genbank:YP_002347934.1,GeneID:1175834;gbkey=CDS;gene=cysA;product=sulfate%2Fthiosulfate transporter subunit;protein_id=YP_002347934.1;transl_table=11
NC_003143.1	RefSeq	region	3366670	3366714	.	-	.	ID=id2190;Note=PS00211 ABC transporters family signature.;Dbxref=GeneID:1175834;gbkey=misc_feature;gene=cysA
NC_003143.1	RefSeq	region	3366997	3367020	.	-	.	ID=id2191;Note=PS00017 ATP%2FGTP-binding site motif A %28P-loop%29.;Dbxref=GeneID:1175834;gbkey=misc_feature;gene=cysA
NC_003143.1	RefSeq	gene	3367112	3367987	.	-	.	ID=gene2907;Name=cysW;Dbxref=GeneID:1175835;gbkey=Gene;gene=cysW;locus_tag=YPO3013
NC_003143.1	RefSeq	CDS	3367112	3367987	.	-	0	ID=cds2771;Name=YP_002347935.1;Parent=gene2907;Note=Part of the ABC transporter complex cysAWTP involved in sulfate%2Fthiosulfate import;Dbxref=InterPro:IPR000515,InterPro:IPR005667,InterPro:IPR011866,UniProtKB%2FTrEMBL:Q7CJH0,Genbank:YP_002347935.1,GeneID:1175835;gbkey=CDS;gene=cysW;product=sulfate%2Fthiosulfate transporter permease;protein_id=YP_002347935.1;transl_table=11
NC_003143.1	RefSeq	region	3367397	3367483	.	-	.	ID=id2192;Note=PS00402 Binding-protein-dependent transport systems inner membrane comp. sign.;Dbxref=GeneID:1175835;gbkey=misc_feature;gene=cysW
NC_003143.1	RefSeq	gene	3367987	3368820	.	-	.	ID=gene2908;Name=cysT;Dbxref=GeneID:1175836;gbkey=Gene;gene=cysT;locus_tag=YPO3014
NC_003143.1	RefSeq	CDS	3367987	3368820	.	-	0	ID=cds2772;Name=YP_002347936.1;Parent=gene2908;Dbxref=InterPro:IPR000515,InterPro:IPR005667,InterPro:IPR011865,UniProtKB%2FTrEMBL:Q7CJH1,Genbank:YP_002347936.1,GeneID:1175836;gbkey=CDS;gene=cysT;product=sulfate%2Fthiosulfate transporter subunit;protein_id=YP_002347936.1;transl_table=11
NC_003143.1	RefSeq	region	3368248	3368334	.	-	.	ID=id2193;Note=PS00402 Binding-protein-dependent transport systems inner membrane comp. sign.;Dbxref=GeneID:1175836;gbkey=misc_feature;gene=cysT
NC_003143.1	RefSeq	gene	3368820	3369857	.	-	.	ID=gene2909;Name=cysP;Dbxref=GeneID:1175837;gbkey=Gene;gene=cysP;locus_tag=YPO3015
NC_003143.1	RefSeq	CDS	3368820	3369857	.	-	0	ID=cds2773;Name=YP_002347937.1;Parent=gene2909;Dbxref=InterPro:IPR005669,InterPro:IPR006059,UniProtKB%2FTrEMBL:Q7CJH2,Genbank:YP_002347937.1,GeneID:1175837;gbkey=CDS;gene=cysP;product=thiosulfate transporter subunit;protein_id=YP_002347937.1;transl_table=11
NC_003143.1	RefSeq	gene	3370172	3371704	.	-	.	ID=gene2910;Name=nanT;Dbxref=GeneID:1175838;gbkey=Gene;gene=nanT;locus_tag=YPO3016
NC_003143.1	RefSeq	CDS	3370172	3371704	.	-	0	ID=cds2774;Name=YP_002347938.1;Parent=gene2910;Dbxref=InterPro:IPR005829,InterPro:IPR007114,InterPro:IPR011701,UniProtKB%2FTrEMBL:Q0WCQ0,Genbank:YP_002347938.1,GeneID:1175838;gbkey=CDS;gene=nanT;product=sialic acid transporter;protein_id=YP_002347938.1;transl_table=11
NC_003143.1	RefSeq	gene	3372309	3373187	.	-	.	ID=gene2911;Name=YPO3017;Dbxref=GeneID:1175839;gbkey=Gene;locus_tag=YPO3017
NC_003143.1	RefSeq	CDS	3372309	3373187	.	-	0	ID=cds2775;Name=YP_002347939.1;Parent=gene2911;Dbxref=InterPro:IPR000281,InterPro:IPR000941,InterPro:IPR001347,UniProtKB%2FTrEMBL:Q7CJH3,Genbank:YP_002347939.1,GeneID:1175839;gbkey=CDS;product=rpiR family transcriptional regulator;protein_id=YP_002347939.1;transl_table=11
NC_003143.1	RefSeq	gene	3373184	3373336	.	-	.	ID=gene2912;Name=YPO3018;Dbxref=GeneID:1175840;gbkey=Gene;locus_tag=YPO3018
NC_003143.1	RefSeq	CDS	3373184	3373336	.	-	0	ID=cds2776;Name=YP_002347940.1;Parent=gene2912;Note=doubtful CDS with no significant database matches. Very low %25G%2BC;Dbxref=UniProtKB%2FTrEMBL:Q7CJH4,Genbank:YP_002347940.1,GeneID:1175840;gbkey=CDS;product=hypothetical protein;protein_id=YP_002347940.1;transl_table=11
NC_003143.1	RefSeq	gene	3373376	3373831	.	-	.	ID=gene2913;Name=YPO3019;Dbxref=GeneID:1175841;gbkey=Gene;locus_tag=YPO3019
NC_003143.1	RefSeq	CDS	3373376	3373831	.	-	0	ID=cds2777;Name=YP_002347941.1;Parent=gene2913;Dbxref=InterPro:IPR004375,UniProtKB%2FTrEMBL:Q0WCP7,Genbank:YP_002347941.1,GeneID:1175841;gbkey=CDS;product=hypothetical protein;protein_id=YP_002347941.1;transl_table=11
NC_003143.1	RefSeq	gene	3373928	3374800	.	-	.	ID=gene2914;Name=YPO3020;Dbxref=GeneID:1175842;gbkey=Gene;locus_tag=YPO3020
NC_003143.1	RefSeq	CDS	3373928	3374800	.	-	0	ID=cds2778;Name=YP_002347942.1;Parent=gene2914;Note=catalyzes the phosphorylation of the N-acetylmannosamine %28ManNAc%29 liberated from N-acetyl-neuraminic acid by the nanA protein;Dbxref=InterPro:IPR000600,UniProtKB%2FTrEMBL:Q0WCP6,Genbank:YP_002347942.1,GeneID:1175842;gbkey=CDS;product=N-acetylmannosamine kinase;protein_id=YP_002347942.1;transl_table=11
NC_003143.1	RefSeq	region	3374333	3374416	.	-	.	ID=id2194;Note=PS01125 ROK family signature.;Dbxref=GeneID:1175842;gbkey=misc_feature
NC_003143.1	RefSeq	gene	3375069	3376197	.	+	.	ID=gene2915;Name=YPO3021;Dbxref=GeneID:1175843;gbkey=Gene;locus_tag=YPO3021;pseudo=true
NC_003143.1	RefSeq	gene	3376403	3377104	.	+	.	ID=gene2916;Name=YPO3023;Dbxref=GeneID:1175844;gbkey=Gene;locus_tag=YPO3023
NC_003143.1	RefSeq	CDS	3376403	3377104	.	+	0	ID=cds2779;Name=YP_002347943.1;Parent=gene2916;Note=Converts N-acetylmannosamine-6-phosphate to N-acetylglucosamine-6-phosphate;Dbxref=InterPro:IPR007260,InterPro:IPR011060,UniProtKB%2FTrEMBL:Q0WCP5,Genbank:YP_002347943.1,GeneID:1175844;gbkey=CDS;product=N-acetylmannosamine-6-phosphate 2-epimerase;protein_id=YP_002347943.1;transl_table=11
NC_003143.1	RefSeq	gene	3377167	3378060	.	+	.	ID=gene2917;Name=nanA;Dbxref=GeneID:1175845;gbkey=Gene;gene=nanA;gene_synonym=npl;locus_tag=YPO3024
NC_003143.1	RefSeq	CDS	3377167	3378060	.	+	0	ID=cds2780;Name=YP_002347944.1;Parent=gene2917;Dbxref=InterPro:IPR002220,InterPro:IPR013785,UniProtKB%2FTrEMBL:Q0WCP4,Genbank:YP_002347944.1,GeneID:1175845;gbkey=CDS;gene=nanA;product=N-acetylneuraminate lyase;protein_id=YP_002347944.1;transl_table=11
NC_003143.1	RefSeq	region	3377284	3377337	.	+	.	ID=id2195;Note=PS00665 Dihydrodipicolinate synthetase signature 1.;Dbxref=GeneID:1175845;gbkey=misc_feature;gene=nanA
NC_003143.1	RefSeq	gene	3378158	3379057	.	-	.	ID=gene2918;Name=YPO3025;Dbxref=GeneID:1175846;gbkey=Gene;locus_tag=YPO3025
NC_003143.1	RefSeq	CDS	3378158	3379057	.	-	0	ID=cds2781;Name=YP_002347945.1;Parent=gene2918;Dbxref=InterPro:IPR006314,UniProtKB%2FTrEMBL:Q0WCP3,Genbank:YP_002347945.1,GeneID:1175846;gbkey=CDS;product=hypothetical protein;protein_id=YP_002347945.1;transl_table=11
NC_003143.1	RefSeq	gene	3379235	3379846	.	-	.	ID=gene2919;Name=yfeY;Dbxref=GeneID:1175847;gbkey=Gene;gene=yfeY;locus_tag=YPO3026
NC_003143.1	RefSeq	CDS	3379235	3379846	.	-	0	ID=cds2782;Name=YP_002347946.1;Parent=gene2919;Dbxref=InterPro:IPR010938,UniProtKB%2FTrEMBL:Q7CJH5,Genbank:YP_002347946.1,GeneID:1175847;gbkey=CDS;gene=yfeY;product=hypothetical protein;protein_id=YP_002347946.1;transl_table=11
NC_003143.1	RefSeq	region	3379775	3379807	.	-	.	ID=id2196;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site.;Dbxref=GeneID:1175847;gbkey=misc_feature;gene=yfeY
NC_003143.1	RefSeq	gene	3380205	3380618	.	+	.	ID=gene2920;Name=ygiW;Dbxref=GeneID:1175848;gbkey=Gene;gene=ygiW;locus_tag=YPO3027
NC_003143.1	RefSeq	CDS	3380205	3380618	.	+	0	ID=cds2783;Name=YP_002347947.1;Parent=gene2920;Dbxref=InterPro:IPR005220,UniProtKB%2FTrEMBL:Q7CJH6,Genbank:YP_002347947.1,GeneID:1175848;gbkey=CDS;gene=ygiW;product=hypothetical protein;protein_id=YP_002347947.1;transl_table=11
NC_003143.1	RefSeq	gene	3381105	3383384	.	+	.	ID=gene2921;Name=YPO3028;Dbxref=GeneID:1175849;gbkey=Gene;locus_tag=YPO3028
NC_003143.1	RefSeq	CDS	3381105	3383384	.	+	0	ID=cds2784;Name=YP_002347948.1;Parent=gene2921;Dbxref=InterPro:IPR003991,InterPro:IPR004899,InterPro:IPR005546,InterPro:IPR006315,InterPro:IPR011050,UniProtKB%2FTrEMBL:Q7CJH7,Genbank:YP_002347948.1,GeneID:1175849;gbkey=CDS;product=autotransporter;protein_id=YP_002347948.1;transl_table=11
NC_003143.1	RefSeq	gene	3383476	3383892	.	-	.	ID=gene2922;Name=YPO3029;Dbxref=GeneID:1175850;gbkey=Gene;locus_tag=YPO3029
NC_003143.1	RefSeq	CDS	3383476	3383892	.	-	0	ID=cds2785;Name=YP_002347949.1;Parent=gene2922;Dbxref=UniProtKB%2FTrEMBL:Q7CJH8,Genbank:YP_002347949.1,GeneID:1175850;gbkey=CDS;product=hypothetical protein;protein_id=YP_002347949.1;transl_table=11
NC_003143.1	RefSeq	gene	3383998	3384183	.	+	.	ID=gene2923;Name=YPO3030;Dbxref=GeneID:1175851;gbkey=Gene;locus_tag=YPO3030
NC_003143.1	RefSeq	CDS	3383998	3384183	.	+	0	ID=cds2786;Name=YP_002347950.1;Parent=gene2923;Note=no significant database hits;Dbxref=UniProtKB%2FTrEMBL:Q74SF6,Genbank:YP_002347950.1,GeneID:1175851;gbkey=CDS;product=hypothetical protein;protein_id=YP_002347950.1;transl_table=11
NC_003143.1	RefSeq	gene	3384365	3384790	.	-	.	ID=gene2924;Name=YPO3031;Dbxref=GeneID:1175852;gbkey=Gene;locus_tag=YPO3031
NC_003143.1	RefSeq	CDS	3384365	3384790	.	-	0	ID=cds2787;Name=YP_002347951.1;Parent=gene2924;Dbxref=InterPro:IPR000182,UniProtKB%2FTrEMBL:Q0WCN7,Genbank:YP_002347951.1,GeneID:1175852;gbkey=CDS;product=acetyltransferase;protein_id=YP_002347951.1;transl_table=11
NC_003143.1	RefSeq	gene	3385073	3386002	.	+	.	ID=gene2925;Name=hemF;Dbxref=GeneID:1175853;gbkey=Gene;gene=hemF;locus_tag=YPO3032
NC_003143.1	RefSeq	CDS	3385073	3386002	.	+	0	ID=cds2788;Name=YP_002347952.1;Parent=gene2925;Note=catalyzes the conversion of the propionic acid groups of rings I and III to vinyl groups during heme synthesis;Dbxref=InterPro:IPR001260,UniProtKB%2FTrEMBL:Q0WCN6,Genbank:YP_002347952.1,GeneID:1175853;gbkey=CDS;gene=hemF;product=coproporphyrinogen III oxidase;protein_id=YP_002347952.1;transl_table=11
NC_003143.1	RefSeq	region	3385568	3385642	.	+	.	ID=id2197;Note=PS01021 Coproporphyrinogen III oxidase signature.;Dbxref=GeneID:1175853;gbkey=misc_feature;gene=hemF
NC_003143.1	RefSeq	gene	3386002	3386460	.	+	.	ID=gene2926;Name=hemF;Dbxref=GeneID:1175854;gbkey=Gene;gene=hemF;locus_tag=YPO3033
NC_003143.1	RefSeq	CDS	3386002	3386460	.	+	0	ID=cds2789;Name=YP_002347953.1;Parent=gene2926;Dbxref=InterPro:IPR003791,UniProtKB%2FTrEMBL:Q0WCN5,Genbank:YP_002347953.1,GeneID:1175854;gbkey=CDS;product=hypothetical protein;protein_id=YP_002347953.1;transl_table=11
NC_003143.1	RefSeq	gene	3386611	3388896	.	-	.	ID=gene2927;Name=maeB;Dbxref=GeneID:1175855;gbkey=Gene;gene=maeB;locus_tag=YPO3034
NC_003143.1	RefSeq	CDS	3386611	3388896	.	-	0	ID=cds2790;Name=YP_002347954.1;Parent=gene2927;Note=NADP-dependent%3B catalyzes the oxidative decarboxylation of malate to form pyruvate%3B decarboxylates oxaloacetate;Dbxref=InterPro:IPR001891,InterPro:IPR002505,InterPro:IPR012188,InterPro:IPR012301,InterPro:IPR012302,UniProtKB%2FTrEMBL:Q0WCN4,Genbank:YP_002347954.1,GeneID:1175855;gbkey=CDS;gene=maeB;product=malic enzyme;protein_id=YP_002347954.1;transl_table=11
NC_003143.1	RefSeq	region	3387292	3387357	.	-	.	ID=id2198;Note=Predicted helix-turn-helix motif with score 1150 %28%2B3.10 SD%29 at aa 514-535%2C sequence HEYYQIMKRRGVSQEQARRAVI;Dbxref=GeneID:1175855;gbkey=misc_feature;gene=maeB
NC_003143.1	RefSeq	gene	3389092	3389688	.	-	.	ID=gene2928;Name=YPO3035;Dbxref=GeneID:1175856;gbkey=Gene;locus_tag=YPO3035
NC_003143.1	RefSeq	CDS	3389092	3389688	.	-	0	ID=cds2791;Name=YP_002347955.1;Parent=gene2928;Dbxref=InterPro:IPR000086,InterPro:IPR004385,UniProtKB%2FTrEMBL:Q74SF4,Genbank:YP_002347955.1,GeneID:1175856;gbkey=CDS;product=hypothetical protein;protein_id=YP_002347955.1;transl_table=11
NC_003143.1	RefSeq	region	3389158	3389181	.	-	.	ID=id2199;Note=PS00017 ATP%2FGTP-binding site motif A %28P-loop%29.;Dbxref=GeneID:1175856;gbkey=misc_feature
NC_003143.1	RefSeq	gene	3389872	3390474	.	-	.	ID=gene2929;Name=napC;Dbxref=GeneID:1175857;gbkey=Gene;gene=napC;locus_tag=YPO3036
NC_003143.1	RefSeq	CDS	3389872	3390474	.	-	0	ID=cds2792;Name=YP_002347956.1;Parent=gene2929;Note=with NapABDFGH functions as a nitrate reductase%3B NapC functions as an electron shuttle between NapAB and NapGH or quinone;Dbxref=InterPro:IPR005126,InterPro:IPR011031,InterPro:IPR011885,UniProtKB%2FTrEMBL:Q0WCN2,Genbank:YP_002347956.1,GeneID:1175857;gbkey=CDS;gene=napC;product=cytochrome c-type protein NapC;protein_id=YP_002347956.1;transl_table=11
NC_003143.1	RefSeq	region	3389923	3389940	.	-	.	ID=id2200;Note=PS00190 Cytochrome c family heme-binding site signature.;Dbxref=GeneID:1175857;gbkey=misc_feature;gene=napC
NC_003143.1	RefSeq	region	3390019	3390036	.	-	.	ID=id2201;Note=PS00190 Cytochrome c family heme-binding site signature.;Dbxref=GeneID:1175857;gbkey=misc_feature;gene=napC
NC_003143.1	RefSeq	region	3390289	3390306	.	-	.	ID=id2202;Note=PS00190 Cytochrome c family heme-binding site signature.;Dbxref=GeneID:1175857;gbkey=misc_feature;gene=napC
NC_003143.1	RefSeq	gene	3390499	3390966	.	-	.	ID=gene2930;Name=napB;Dbxref=GeneID:1175858;gbkey=Gene;gene=napB;locus_tag=YPO3037
NC_003143.1	RefSeq	CDS	3390499	3390966	.	-	0	ID=cds2793;Name=YP_002347957.1;Parent=gene2930;Note=small subunit of periplasmic nitrate reductase%3B receives electrons from the membrane-bound NapC and passes them to NapA;Dbxref=InterPro:IPR005591,UniProtKB%2FTrEMBL:Q7CJH9,Genbank:YP_002347957.1,GeneID:1175858;gbkey=CDS;gene=napB;product=citrate reductase cytochrome c-type subunit;protein_id=YP_002347957.1;transl_table=11
NC_003143.1	RefSeq	region	3390565	3390582	.	-	.	ID=id2203;Note=PS00190 Cytochrome c family heme-binding site signature.;Dbxref=GeneID:1175858;gbkey=misc_feature;gene=napB
NC_003143.1	RefSeq	region	3390685	3390702	.	-	.	ID=id2204;Note=PS00190 Cytochrome c family heme-binding site signature.;Dbxref=GeneID:1175858;gbkey=misc_feature;gene=napB
NC_003143.1	RefSeq	gene	3391049	3393541	.	-	.	ID=gene2931;Name=napA;Dbxref=GeneID:1175859;gbkey=Gene;gene=napA;locus_tag=YPO3038
NC_003143.1	RefSeq	CDS	3391049	3393541	.	-	0	ID=cds2794;Name=YP_002347958.1;Parent=gene2931;Note=periplasmic%3B catalytic subunit%3B with NapBC catalyzes the reduction of nitrate to nitrite%3B NapAB receives electrons from NapC;Dbxref=InterPro:IPR006311,InterPro:IPR006655,InterPro:IPR006656,InterPro:IPR006657,InterPro:IPR006963,InterPro:IPR009010,InterPro:IPR010051,UniProtKB%2FTrEMBL:Q0WCN0,Genbank:YP_002347958.1,GeneID:1175859;gbkey=CDS;gene=napA;product=nitrate reductase catalytic subunit;protein_id=YP_002347958.1;transl_table=11
NC_003143.1	RefSeq	region	3393359	3393412	.	-	.	ID=id2205;Note=PS00551 Prokaryotic molybdopterin oxidoreductases signature 1.;Dbxref=GeneID:1175859;gbkey=misc_feature;gene=napA
NC_003143.1	RefSeq	gene	3393538	3393804	.	-	.	ID=gene2932;Name=napD;Dbxref=GeneID:1175860;gbkey=Gene;gene=napD;locus_tag=YPO3039
NC_003143.1	RefSeq	CDS	3393538	3393804	.	-	0	ID=cds2795;Name=YP_002347959.1;Parent=gene2932;Dbxref=InterPro:IPR005623,UniProtKB%2FTrEMBL:Q0WCM9,Genbank:YP_002347959.1,GeneID:1175860;gbkey=CDS;gene=napD;product=assembly protein for periplasmic nitrate reductase;protein_id=YP_002347959.1;transl_table=11
NC_003143.1	RefSeq	gene	3393794	3394297	.	-	.	ID=gene2933;Name=napF;Dbxref=GeneID:1175861;gbkey=Gene;gene=napF;locus_tag=YPO3040
NC_003143.1	RefSeq	CDS	3393794	3394297	.	-	0	ID=cds2796;Name=YP_002347960.1;Parent=gene2933;Dbxref=InterPro:IPR001450,InterPro:IPR004496,UniProtKB%2FTrEMBL:Q7CJI0,Genbank:YP_002347960.1,GeneID:1175861;gbkey=CDS;gene=napF;product=ferredoxin-type protein NapF;protein_id=YP_002347960.1;transl_table=11
NC_003143.1	RefSeq	region	3393836	3393871	.	-	.	ID=id2206;Note=PS00198 4Fe-4S ferredoxins%2C iron-sulfur binding region signature.;Dbxref=GeneID:1175861;gbkey=misc_feature;gene=napF
NC_003143.1	RefSeq	region	3394052	3394087	.	-	.	ID=id2207;Note=PS00198 4Fe-4S ferredoxins%2C iron-sulfur binding region signature.;Dbxref=GeneID:1175861;gbkey=misc_feature;gene=napF
NC_003143.1	RefSeq	region	3394148	3394183	.	-	.	ID=id2208;Note=PS00198 4Fe-4S ferredoxins%2C iron-sulfur binding region signature.;Dbxref=GeneID:1175861;gbkey=misc_feature;gene=napF
NC_003143.1	RefSeq	gene	3395130	3395759	.	+	.	ID=gene2934;Name=narP;Dbxref=GeneID:1175862;gbkey=Gene;gene=narP;locus_tag=YPO3041
NC_003143.1	RefSeq	CDS	3395130	3395759	.	+	0	ID=cds2797;Name=YP_002347961.1;Parent=gene2934;Dbxref=InterPro:IPR000792,InterPro:IPR001789,InterPro:IPR011006,InterPro:IPR011991,UniProtKB%2FTrEMBL:Q0WCM7,Genbank:YP_002347961.1,GeneID:1175862;gbkey=CDS;gene=narP;product=nitrate%2Fnitrite response regulator protein NarP;protein_id=YP_002347961.1;transl_table=11
NC_003143.1	RefSeq	region	3395616	3395699	.	+	.	ID=id2209;Note=PS00622 Bacterial regulatory proteins%2C luxR family signature.;Dbxref=GeneID:1175862;gbkey=misc_feature;gene=narP
NC_003143.1	RefSeq	region	3395619	3395684	.	+	.	ID=id2210;Note=Predicted helix-turn-helix motif with score 1864 %28%2B5.54 SD%29 at aa 175-196%2C sequence MSNKQVAFELHISEETVKVHIR;Dbxref=GeneID:1175862;gbkey=misc_feature;gene=narP
NC_003143.1	RefSeq	gene	3395772	3396050	.	-	.	ID=gene2935;Name=YPO3042;Dbxref=GeneID:1175863;gbkey=Gene;locus_tag=YPO3042
NC_003143.1	RefSeq	CDS	3395772	3396050	.	-	0	ID=cds2798;Name=YP_002347962.1;Parent=gene2935;Dbxref=UniProtKB%2FTrEMBL:Q7CJI1,Genbank:YP_002347962.1,GeneID:1175863;gbkey=CDS;product=hypothetical protein;protein_id=YP_002347962.1;transl_table=11
NC_003143.1	RefSeq	gene	3396465	3399596	.	+	.	ID=gene2936;Name=YPO3043;Dbxref=GeneID:1175864;gbkey=Gene;locus_tag=YPO3043
NC_003143.1	RefSeq	CDS	3396465	3399596	.	+	0	ID=cds2799;Name=YP_002347963.1;Parent=gene2936;Dbxref=InterPro:IPR001036,InterPro:IPR004764,UniProtKB%2FTrEMBL:Q7CJI2,Genbank:YP_002347963.1,GeneID:1175864;gbkey=CDS;product=aminoglycoside%2Fmultidrug efflux system;protein_id=YP_002347963.1;transl_table=11
NC_003143.1	RefSeq	gene	3399827	3400411	.	+	.	ID=gene2937;Name=YPO3044;Dbxref=GeneID:1175865;gbkey=Gene;locus_tag=YPO3044
NC_003143.1	RefSeq	CDS	3399827	3400411	.	+	0	ID=cds2800;Name=YP_002347964.1;Parent=gene2937;Dbxref=UniProtKB%2FTrEMBL:Q7CJI3,Genbank:YP_002347964.1,GeneID:1175865;gbkey=CDS;product=hypothetical protein;protein_id=YP_002347964.1;transl_table=11
NC_003143.1	RefSeq	gene	3400700	3401248	.	+	.	ID=gene2938;Name=ybcI;Dbxref=GeneID:1175866;gbkey=Gene;gene=ybcI;locus_tag=YPO3045
NC_003143.1	RefSeq	CDS	3400700	3401248	.	+	0	ID=cds2801;Name=YP_002347965.1;Parent=gene2938;Dbxref=InterPro:IPR007404,UniProtKB%2FTrEMBL:Q7CJI4,Genbank:YP_002347965.1,GeneID:1175866;gbkey=CDS;gene=ybcI;product=hypothetical protein;protein_id=YP_002347965.1;transl_table=11
NC_003143.1	RefSeq	gene	3402002	3403177	.	-	.	ID=gene2939;Name=YPO3046;Dbxref=GeneID:1175867;gbkey=Gene;locus_tag=YPO3046
NC_003143.1	RefSeq	CDS	3402002	3403177	.	-	0	ID=cds2802;Name=YP_002347966.1;Parent=gene2939;Dbxref=InterPro:IPR007197,UniProtKB%2FTrEMBL:Q0WCM2,Genbank:YP_002347966.1,GeneID:1175867;gbkey=CDS;product=sulfatase modifier protein;protein_id=YP_002347966.1;transl_table=11
NC_003143.1	RefSeq	gene	3403235	3404908	.	-	.	ID=gene2940;Name=ydeN;Dbxref=GeneID:1175868;gbkey=Gene;gene=ydeN;locus_tag=YPO3047
NC_003143.1	RefSeq	CDS	3403235	3404908	.	-	0	ID=cds2803;Name=YP_002347967.1;Parent=gene2940;Dbxref=InterPro:IPR000917,UniProtKB%2FTrEMBL:Q7CJI5,Genbank:YP_002347967.1,GeneID:1175868;gbkey=CDS;gene=ydeN;product=sulfatase;protein_id=YP_002347967.1;transl_table=11
NC_003143.1	RefSeq	region	3404354	3404386	.	-	.	ID=id2211;Note=PS00149 Sulfatases signature 2.;Dbxref=GeneID:1175868;gbkey=misc_feature;gene=ydeN
NC_003143.1	RefSeq	gene	3405386	3406456	.	-	.	ID=gene2941;Name=YPO3048;Dbxref=GeneID:1175869;gbkey=Gene;locus_tag=YPO3048
NC_003143.1	RefSeq	CDS	3405386	3406456	.	-	0	ID=cds2804;Name=YP_002347968.1;Parent=gene2941;Dbxref=InterPro:IPR003439,InterPro:IPR003593,InterPro:IPR008995,UniProtKB%2FTrEMBL:Q0WCM0,Genbank:YP_002347968.1,GeneID:1175869;gbkey=CDS;product=ABC transporter ATP-binding protein;protein_id=YP_002347968.1;transl_table=11
NC_003143.1	RefSeq	region	3405995	3406039	.	-	.	ID=id2212;Note=PS00211 ABC transporters family signature.;Dbxref=GeneID:1175869;gbkey=misc_feature
NC_003143.1	RefSeq	region	3406328	3406351	.	-	.	ID=id2213;Note=PS00017 ATP%2FGTP-binding site motif A %28P-loop%29.;Dbxref=GeneID:1175869;gbkey=misc_feature
NC_003143.1	RefSeq	gene	3406449	3408218	.	-	.	ID=gene2942;Name=YPO3049;Dbxref=GeneID:1175870;gbkey=Gene;locus_tag=YPO3049
NC_003143.1	RefSeq	CDS	3406449	3408218	.	-	0	ID=cds2805;Name=YP_002347969.1;Parent=gene2942;Dbxref=InterPro:IPR000515,InterPro:IPR002160,UniProtKB%2FTrEMBL:Q7CJI6,Genbank:YP_002347969.1,GeneID:1175870;gbkey=CDS;product=binding protein-dependent transporter inner membrane protein;protein_id=YP_002347969.1;transl_table=11
NC_003143.1	RefSeq	region	3406686	3406772	.	-	.	ID=id2214;Note=PS00402 Binding-protein-dependent transport systems inner membrane comp. sign.;Dbxref=GeneID:1175870;gbkey=misc_feature
NC_003143.1	RefSeq	region	3407490	3407540	.	-	.	ID=id2215;Note=PS00283 Soybean trypsin inhibitor %28Kunitz%29 protease inhibitors family signature.;Dbxref=GeneID:1175870;gbkey=misc_feature
NC_003143.1	RefSeq	region	3407619	3407705	.	-	.	ID=id2216;Note=PS00402 Binding-protein-dependent transport systems inner membrane comp. sign.;Dbxref=GeneID:1175870;gbkey=misc_feature
NC_003143.1	RefSeq	gene	3408313	3409401	.	-	.	ID=gene2943;Name=YPO3050;Dbxref=GeneID:1175871;gbkey=Gene;locus_tag=YPO3050
NC_003143.1	RefSeq	CDS	3408313	3409401	.	-	0	ID=cds2806;Name=YP_002347970.1;Parent=gene2943;Dbxref=InterPro:IPR006059,InterPro:IPR011587,UniProtKB%2FTrEMBL:Q0WCL8,Genbank:YP_002347970.1,GeneID:1175871;gbkey=CDS;product=hypothetical protein;protein_id=YP_002347970.1;transl_table=11
NC_003143.1	RefSeq	gene	3409685	3410185	.	+	.	ID=gene2944;Name=YPO3051;Dbxref=GeneID:1175872;gbkey=Gene;locus_tag=YPO3051
NC_003143.1	RefSeq	CDS	3409685	3410185	.	+	0	ID=cds2807;Name=YP_002347971.1;Parent=gene2944;Dbxref=InterPro:IPR011990,InterPro:IPR013026,UniProtKB%2FTrEMBL:Q7CJI7,Genbank:YP_002347971.1,GeneID:1175872;gbkey=CDS;product=hypothetical protein;protein_id=YP_002347971.1;transl_table=11
NC_003143.1	RefSeq	gene	3410345	3410743	.	+	.	ID=gene2945;Name=YPO3052;Dbxref=GeneID:1175873;gbkey=Gene;locus_tag=YPO3052
NC_003143.1	RefSeq	CDS	3410345	3410743	.	+	0	ID=cds2808;Name=YP_002347972.1;Parent=gene2945;Dbxref=InterPro:IPR006504,InterPro:IPR006660,InterPro:IPR012335,InterPro:IPR012336,UniProtKB%2FTrEMBL:Q7CJI8,Genbank:YP_002347972.1,GeneID:1175873;gbkey=CDS;product=hypothetical protein;protein_id=YP_002347972.1;transl_table=11
NC_003143.1	RefSeq	gene	3410745	3411872	.	+	.	ID=gene2946;Name=dapE;Dbxref=GeneID:1175874;gbkey=Gene;gene=dapE;gene_synonym=msgB;locus_tag=YPO3053
NC_003143.1	RefSeq	CDS	3410745	3411872	.	+	0	ID=cds2809;Name=YP_002347973.1;Parent=gene2946;Note=dapE-encoded N-succinyl-L%2CL-diaminopimelic acid desuccinylase %28DapE%29%2C catalyzes the hydrolysis of N-succinyl-L%2CLdiaminopimelate L%2CL-SDAP to L%2CL-diaminopimelate and succinate. It is a metalloprotease containing dinuclear active sites. Its structure is similar to the carboxypeptidase G2 from Pseudomonas sp. strain RS-16 and the aminopeptidase from Aeromonas proteolytica.;Dbxref=InterPro:IPR001261,InterPro:IPR002933,InterPro:IPR005941,InterPro:IPR011650,UniProtKB%2FTrEMBL:Q7CJI9,Genbank:YP_002347973.1,GeneID:1175874;gbkey=CDS;gene=dapE;product=succinyl-diaminopimelate desuccinylase;protein_id=YP_002347973.1;transl_table=11
NC_003143.1	RefSeq	region	3410925	3410954	.	+	.	ID=id2217;Note=PS00758 ArgE %2F dapE %2F ACY1 %2F CPG2 %2F yscS family signature 1.;Dbxref=GeneID:1175874;gbkey=misc_feature;gene=dapE
NC_003143.1	RefSeq	gene	3411869	3412546	.	+	.	ID=gene2947;Name=dapE;Dbxref=GeneID:1175875;gbkey=Gene;gene=dapE;locus_tag=YPO3054
NC_003143.1	RefSeq	CDS	3411869	3412546	.	+	0	ID=cds2810;Name=YP_002347974.1;Parent=gene2947;Dbxref=InterPro:IPR003709,UniProtKB%2FTrEMBL:Q7CJJ0,Genbank:YP_002347974.1,GeneID:1175875;gbkey=CDS;product=carboxypeptidase;protein_id=YP_002347974.1;transl_table=11
NC_003143.1	RefSeq	gene	3412614	3412808	.	+	.	ID=gene2948;Name=YPO3055;Dbxref=GeneID:1175876;gbkey=Gene;locus_tag=YPO3055
NC_003143.1	RefSeq	CDS	3412614	3412808	.	+	0	ID=cds2811;Name=YP_002347975.1;Parent=gene2948;Dbxref=UniProtKB%2FTrEMBL:Q0WCL3,Genbank:YP_002347975.1,GeneID:1175876;gbkey=CDS;product=hypothetical protein;protein_id=YP_002347975.1;transl_table=11
NC_003143.1	RefSeq	region	3412614	3412682	.	+	.	ID=id2218;Note=1 probable transmembrane helix predicted;Dbxref=GeneID:1175876;gbkey=misc_feature
NC_003143.1	RefSeq	gene	3413013	3415112	.	-	.	ID=gene2949;Name=YPO3056;Dbxref=GeneID:1175877;gbkey=Gene;locus_tag=YPO3056
NC_003143.1	RefSeq	CDS	3413013	3415112	.	-	0	ID=cds2812;Name=YP_002347976.1;Parent=gene2949;Dbxref=InterPro:IPR000182,InterPro:IPR007807,UniProtKB%2FTrEMBL:Q7CJJ1,Genbank:YP_002347976.1,GeneID:1175877;gbkey=CDS;product=acetyltransferase;protein_id=YP_002347976.1;transl_table=11
NC_003143.1	RefSeq	region	3414498	3414521	.	-	.	ID=id2219;Note=PS00017 ATP%2FGTP-binding site motif A %28P-loop%29.;Dbxref=GeneID:1175877;gbkey=misc_feature
NC_003143.1	RefSeq	gene	3415114	3415566	.	-	.	ID=gene2950;Name=yeaL;Dbxref=GeneID:1175878;gbkey=Gene;gene=yeaL;locus_tag=YPO3057
NC_003143.1	RefSeq	CDS	3415114	3415566	.	-	0	ID=cds2813;Name=YP_002347977.1;Parent=gene2950;Dbxref=InterPro:IPR007382,UniProtKB%2FTrEMBL:Q74SD5,Genbank:YP_002347977.1,GeneID:1175878;gbkey=CDS;gene=yeaL;product=hypothetical protein;protein_id=YP_002347977.1;transl_table=11
NC_003143.1	RefSeq	gene	3415660	3416526	.	-	.	ID=gene2951;Name=YPO3058;Dbxref=GeneID:1175879;gbkey=Gene;locus_tag=YPO3058
NC_003143.1	RefSeq	CDS	3415660	3416526	.	-	0	ID=cds2814;Name=YP_002347978.1;Parent=gene2951;Dbxref=InterPro:IPR006025,InterPro:IPR007343,UniProtKB%2FTrEMBL:Q7CJJ2,Genbank:YP_002347978.1,GeneID:1175879;gbkey=CDS;product=hypothetical protein;protein_id=YP_002347978.1;transl_table=11
NC_003143.1	RefSeq	region	3416002	3416031	.	-	.	ID=id2220;Note=PS00142 Neutral zinc metallopeptidases%2C zinc-binding region signature.;Dbxref=GeneID:1175879;gbkey=misc_feature
NC_003143.1	RefSeq	region	3416362	3416427	.	-	.	ID=id2221;Note=1 probable transmembrane helix predicted;Dbxref=GeneID:1175879;gbkey=misc_feature
NC_003143.1	RefSeq	gene	3416745	3417458	.	-	.	ID=gene2952;Name=purC;Dbxref=GeneID:1175880;gbkey=Gene;gene=purC;locus_tag=YPO3059
NC_003143.1	RefSeq	CDS	3416745	3417458	.	-	0	ID=cds2815;Name=YP_002347979.1;Parent=gene2952;Note=catalyzes the formation of %28S%29-2-%285-amino-1-%285-phospho-D-ribosyl%29imidazole-4-carboxamido%29succinate from 5-amino-1-%285-phospho-D-ribosyl%29imidazole-4-carboxylate and L-aspartate in purine biosynthesis%3B SAICAR synthase;Dbxref=InterPro:IPR001636,InterPro:IPR013816,UniProtKB%2FTrEMBL:Q0WCK9,Genbank:YP_002347979.1,GeneID:1175880;gbkey=CDS;gene=purC;product=phosphoribosylaminoimidazole-succinocarboxamide synthase;protein_id=YP_002347979.1;transl_table=11
NC_003143.1	RefSeq	region	3416916	3416942	.	-	.	ID=id2222;Note=PS01058 SAICAR synthetase signature 2.;Dbxref=GeneID:1175880;gbkey=misc_feature;gene=purC
NC_003143.1	RefSeq	region	3417159	3417203	.	-	.	ID=id2223;Note=PS01057 SAICAR synthetase signature 1.;Dbxref=GeneID:1175880;gbkey=misc_feature;gene=purC
NC_003143.1	RefSeq	repeat_region	3417498	3418209	.	-	.	ID=id2224;Note=Contains a %27G%27 at nucleotide position 315%7EIS200-like insertion sequence:IS1541;gbkey=repeat_region
NC_003143.1	RefSeq	gene	3417606	3418064	.	-	.	ID=gene2953;Name=tnp;Dbxref=GeneID:1175881;gbkey=Gene;gene=tnp;locus_tag=YPO3060
NC_003143.1	RefSeq	CDS	3417606	3418064	.	-	0	ID=cds2816;Name=YP_002347980.1;Parent=gene2953;Dbxref=InterPro:IPR002686,UniProtKB%2FTrEMBL:Q74YM6,Genbank:YP_002347980.1,GeneID:1175881;gbkey=CDS;gene=tnp;product=transposase for the IS1541 insertion element;protein_id=YP_002347980.1;transl_table=11
NC_003143.1	RefSeq	gene	3418239	3419297	.	-	.	ID=gene2954;Name=dapX;Dbxref=GeneID:1175882;gbkey=Gene;gene=dapX;gene_synonym=nlpB;locus_tag=YPO3061
NC_003143.1	RefSeq	CDS	3418239	3419297	.	-	0	ID=cds2817;Name=YP_002347981.1;Parent=gene2954;Dbxref=InterPro:IPR010653,UniProtKB%2FTrEMBL:Q0WCK7,Genbank:YP_002347981.1,GeneID:1175882;gbkey=CDS;gene=dapX;product=lipoprotein;protein_id=YP_002347981.1;transl_table=11
NC_003143.1	RefSeq	region	3419223	3419255	.	-	.	ID=id2225;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site.;Dbxref=GeneID:1175882;gbkey=misc_feature;gene=dapX
NC_003143.1	RefSeq	gene	3419315	3420196	.	-	.	ID=gene2955;Name=dapA;Dbxref=GeneID:1175883;gbkey=Gene;gene=dapA;locus_tag=YPO3062
NC_003143.1	RefSeq	CDS	3419315	3420196	.	-	0	ID=cds2818;Name=YP_002347982.1;Parent=gene2955;Note=catalyzes the formation of dihydrodipicolinate from L-aspartate 4-semialdehyde and pyruvate in lysine and diaminopimelate biosynthesis;Dbxref=InterPro:IPR002220,InterPro:IPR005263,InterPro:IPR013785,UniProtKB%2FTrEMBL:Q0WCK6,Genbank:YP_002347982.1,GeneID:1175883;gbkey=CDS;gene=dapA;product=dihydrodipicolinate synthase;protein_id=YP_002347982.1;transl_table=11
NC_003143.1	RefSeq	region	3419708	3419800	.	-	.	ID=id2226;Note=PS00666 Dihydrodipicolinate synthetase signature 2.;Dbxref=GeneID:1175883;gbkey=misc_feature;gene=dapA
NC_003143.1	RefSeq	region	3420032	3420085	.	-	.	ID=id2227;Note=PS00665 Dihydrodipicolinate synthetase signature 1.;Dbxref=GeneID:1175883;gbkey=misc_feature;gene=dapA
NC_003143.1	RefSeq	gene	3420361	3420930	.	+	.	ID=gene2956;Name=gcvR;Dbxref=GeneID:1175884;gbkey=Gene;gene=gcvR;locus_tag=YPO3063
NC_003143.1	RefSeq	CDS	3420361	3420930	.	+	0	ID=cds2819;Name=YP_002347983.1;Parent=gene2956;Note=negative transcriptional regulator of the gcvTHP operon;Dbxref=InterPro:IPR002912,UniProtKB%2FTrEMBL:Q0WCK5,Genbank:YP_002347983.1,GeneID:1175884;gbkey=CDS;gene=gcvR;product=glycine cleavage system transcriptional repressor;protein_id=YP_002347983.1;transl_table=11
NC_003143.1	RefSeq	gene	3420930	3421403	.	+	.	ID=gene2957;Name=bcp;Dbxref=GeneID:1175885;gbkey=Gene;gene=bcp;locus_tag=YPO3064
NC_003143.1	RefSeq	CDS	3420930	3421403	.	+	0	ID=cds2820;Name=YP_002347984.1;Parent=gene2957;Note=bacterioferritin comigratory protein%3B thiol peroxidase%3B thioredoxin-dependent%3B hydroperoxide peroxidase%3B in Escherichia coli this enzyme preferentially reduces linoleic acid hydroperoxide%3B contains an active site cysteine;Dbxref=InterPro:IPR012335,InterPro:IPR012336,InterPro:IPR013740,UniProtKB%2FTrEMBL:Q0WCK4,Genbank:YP_002347984.1,GeneID:1175885;gbkey=CDS;gene=bcp;product=thioredoxin-dependent thiol peroxidase;protein_id=YP_002347984.1;transl_table=11
NC_003143.1	RefSeq	gene	3421647	3422066	.	-	.	ID=gene2958;Name=YPO3065;Dbxref=GeneID:1175886;gbkey=Gene;locus_tag=YPO3065
NC_003143.1	RefSeq	CDS	3421647	3422066	.	-	0	ID=cds2821;Name=YP_002347985.1;Parent=gene2958;Note=no significant database matches;Dbxref=UniProtKB%2FTrEMBL:Q7CJJ4,Genbank:YP_002347985.1,GeneID:1175886;gbkey=CDS;product=hypothetical protein;protein_id=YP_002347985.1;transl_table=11
NC_003143.1	RefSeq	gene	3422070	3422765	.	-	.	ID=gene2959;Name=YPO3066;Dbxref=GeneID:1175887;gbkey=Gene;locus_tag=YPO3066
NC_003143.1	RefSeq	CDS	3422070	3422765	.	-	0	ID=cds2822;Name=YP_002347986.1;Parent=gene2959;Note=no significant database hits. Similar to YPO1619 %2853%25 identity in 166 aa overlap%29;Dbxref=UniProtKB%2FTrEMBL:Q7CJJ5,Genbank:YP_002347986.1,GeneID:1175887;gbkey=CDS;product=hypothetical protein;protein_id=YP_002347986.1;transl_table=11
NC_003143.1	RefSeq	gene	3423103	3423276	.	+	.	ID=gene2960;Name=YPO3067;Dbxref=GeneID:1175888;gbkey=Gene;locus_tag=YPO3067
NC_003143.1	RefSeq	CDS	3423103	3423276	.	+	0	ID=cds2823;Name=YP_002347987.1;Parent=gene2960;Note=no significant database hits;Dbxref=UniProtKB%2FTrEMBL:Q74SC7,Genbank:YP_002347987.1,GeneID:1175888;gbkey=CDS;product=hypothetical protein;protein_id=YP_002347987.1;transl_table=11
NC_003143.1	RefSeq	gene	3423365	3424429	.	-	.	ID=gene2961;Name=perM;Dbxref=GeneID:1175889;gbkey=Gene;gene=perM;locus_tag=YPO3068
NC_003143.1	RefSeq	CDS	3423365	3424429	.	-	0	ID=cds2824;Name=YP_002347988.1;Parent=gene2961;Dbxref=InterPro:IPR002549,UniProtKB%2FTrEMBL:Q7CJJ6,Genbank:YP_002347988.1,GeneID:1175889;gbkey=CDS;gene=perM;product=hypothetical protein;protein_id=YP_002347988.1;transl_table=11
NC_003143.1	RefSeq	gene	3424784	3426244	.	+	.	ID=gene2962;Name=YPO3069;Dbxref=GeneID:1175890;gbkey=Gene;locus_tag=YPO3069
NC_003143.1	RefSeq	CDS	3424784	3426244	.	+	0	ID=cds2825;Name=YP_002347989.1;Parent=gene2962;Dbxref=InterPro:IPR001915,InterPro:IPR011990,InterPro:IPR013026,UniProtKB%2FTrEMBL:Q0WCJ9,Genbank:YP_002347989.1,GeneID:1175890;gbkey=CDS;product=hypothetical protein;protein_id=YP_002347989.1;transl_table=11
NC_003143.1	RefSeq	gene	3426351	3426707	.	+	.	ID=gene2963;Name=yfgD;Dbxref=GeneID:1175891;gbkey=Gene;gene=yfgD;locus_tag=YPO3070
NC_003143.1	RefSeq	CDS	3426351	3426707	.	+	0	ID=cds2826;Name=YP_002347990.1;Parent=gene2963;Dbxref=InterPro:IPR006659,InterPro:IPR006660,InterPro:IPR012335,InterPro:IPR012336,UniProtKB%2FTrEMBL:Q0WCJ8,Genbank:YP_002347990.1,GeneID:1175891;gbkey=CDS;gene=yfgD;product=arsenate reductase;protein_id=YP_002347990.1;transl_table=11
NC_003143.1	RefSeq	gene	3426919	3427638	.	-	.	ID=gene2964;Name=YPO3071;Dbxref=GeneID:1175892;gbkey=Gene;locus_tag=YPO3071
NC_003143.1	RefSeq	CDS	3426919	3427638	.	-	0	ID=cds2827;Name=YP_002347991.1;Parent=gene2964;Note=controls initiation of DNA replication by inhibiting re-initiation of replication%2C promotes hydrolysis of DnaA-bound ATP;Dbxref=InterPro:IPR001957,InterPro:IPR013317,UniProtKB%2FTrEMBL:Q0WCJ7,Genbank:YP_002347991.1,GeneID:1175892;gbkey=CDS;product=DNA replication initiation factor;protein_id=YP_002347991.1;transl_table=11
NC_003143.1	RefSeq	repeat_region	3427706	3428417	.	-	.	ID=id2228;Note=Contains a %27A%27 at nucleotide position 315%7EIS200-like insertion sequence:IS1541;gbkey=repeat_region
NC_003143.1	RefSeq	gene	3427814	3428272	.	-	.	ID=gene2965;Name=tnp;Dbxref=GeneID:1175893;gbkey=Gene;gene=tnp;locus_tag=YPO3072
NC_003143.1	RefSeq	CDS	3427814	3428272	.	-	0	ID=cds2828;Name=YP_002347992.1;Parent=gene2965;Dbxref=InterPro:IPR002686,UniProtKB%2FTrEMBL:Q56938,Genbank:YP_002347992.1,GeneID:1175893;gbkey=CDS;gene=tnp;product=transposase for the IS1541 insertion element;protein_id=YP_002347992.1;transl_table=11
NC_003143.1	RefSeq	gene	3428619	3430004	.	-	.	ID=gene2966;Name=cysS;Dbxref=GeneID:1175894;gbkey=Gene;gene=cysS;locus_tag=YPO3073
NC_003143.1	RefSeq	CDS	3428619	3430004	.	-	0	ID=cds2829;Name=YP_002347993.1;Parent=gene2966;Note=catalyzes a two-step reaction%3B charges a cysteine by linking its carboxyl group to the alpha-phosphate of ATP then transfers the aminoacyl-adenylate to its tRNA;Dbxref=InterPro:IPR001412,InterPro:IPR002308,InterPro:IPR009080,UniProtKB%2FTrEMBL:Q0WCJ5,Genbank:YP_002347993.1,GeneID:1175894;gbkey=CDS;gene=cysS;product=cysteinyl-tRNA synthetase;protein_id=YP_002347993.1;transl_table=11
NC_003143.1	RefSeq	gene	3430215	3430709	.	+	.	ID=gene2967;Name=ppiB;Dbxref=GeneID:1175895;gbkey=Gene;gene=ppiB;locus_tag=YPO3074
NC_003143.1	RefSeq	CDS	3430215	3430709	.	+	0	ID=cds2830;Name=YP_002347994.1;Parent=gene2967;Dbxref=InterPro:IPR002130,UniProtKB%2FTrEMBL:Q7CJZ0,Genbank:YP_002347994.1,GeneID:1175895;gbkey=CDS;gene=ppiB;product=peptidyl-prolyl cis-trans isomerase B;protein_id=YP_002347994.1;transl_table=11
NC_003143.1	RefSeq	region	3430320	3430373	.	+	.	ID=id2229;Note=PS00170 Cyclophilin-type peptidyl-prolyl cis-trans isomerase signature.;Dbxref=GeneID:1175895;gbkey=misc_feature;gene=ppiB
NC_003143.1	RefSeq	gene	3430720	3431442	.	+	.	ID=gene2968;Name=YPO3075;Dbxref=GeneID:1175896;gbkey=Gene;locus_tag=YPO3075
NC_003143.1	RefSeq	CDS	3430720	3431442	.	+	0	ID=cds2831;Name=YP_002347995.1;Parent=gene2968;Note=catalyzes the formation of 2%2C3%3Ddiacylglucosamine 1-phosphate from UDP-2%2C3%3Ddiacylglucosamine;Dbxref=InterPro:IPR004843,InterPro:IPR010138,UniProtKB%2FTrEMBL:Q0WCJ3,Genbank:YP_002347995.1,GeneID:1175896;gbkey=CDS;product=UDP-2%2C3-diacylglucosamine hydrolase;protein_id=YP_002347995.1;transl_table=11
NC_003143.1	RefSeq	gene	3431738	3432262	.	+	.	ID=gene2969;Name=purE;Dbxref=GeneID:1175897;gbkey=Gene;gene=purE;locus_tag=YPO3076
NC_003143.1	RefSeq	CDS	3431738	3432262	.	+	0	ID=cds2832;Name=YP_002347996.1;Parent=gene2969;Dbxref=InterPro:IPR000031,UniProtKB%2FTrEMBL:Q7CJZ1,Genbank:YP_002347996.1,GeneID:1175897;gbkey=CDS;gene=purE;product=phosphoribosylaminoimidazole carboxylase catalytic subunit PurE;protein_id=YP_002347996.1;transl_table=11
NC_003143.1	RefSeq	gene	3432259	3433323	.	+	.	ID=gene2970;Name=purK;Dbxref=GeneID:1175898;gbkey=Gene;gene=purK;locus_tag=YPO3077
NC_003143.1	RefSeq	CDS	3432259	3433323	.	+	0	ID=cds2833;Name=YP_002347997.1;Parent=gene2970;Note=With PurE catalyzes the conversion of aminoimidazole ribonucleotide to carboxyaminoimidazole ribonucleotide in the de novo purine nucleotide biosynthetic pathway;Dbxref=InterPro:IPR003135,InterPro:IPR005875,InterPro:IPR011054,InterPro:IPR011761,InterPro:IPR013816,InterPro:IPR013817,UniProtKB%2FTrEMBL:Q7CJZ2,Genbank:YP_002347997.1,GeneID:1175898;gbkey=CDS;gene=purK;product=phosphoribosylaminoimidazole carboxylase ATPase subunit;protein_id=YP_002347997.1;transl_table=11
NC_003143.1	RefSeq	gene	3433367	3435796	.	-	.	ID=gene2971;Name=ybbP;Dbxref=GeneID:1175899;gbkey=Gene;gene=ybbP;locus_tag=YPO3078
NC_003143.1	RefSeq	CDS	3433367	3435796	.	-	0	ID=cds2834;Name=YP_002347998.1;Parent=gene2971;Dbxref=InterPro:IPR003838,UniProtKB%2FTrEMBL:Q0WCJ0,Genbank:YP_002347998.1,GeneID:1175899;gbkey=CDS;gene=ybbP;product=permease;protein_id=YP_002347998.1;transl_table=11
NC_003143.1	RefSeq	region	3435713	3435745	.	-	.	ID=id2230;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site.;Dbxref=GeneID:1175899;gbkey=misc_feature;gene=ybbP
NC_003143.1	RefSeq	gene	3435793	3436479	.	-	.	ID=gene2972;Name=ybbA;Dbxref=GeneID:1175900;gbkey=Gene;gene=ybbA;locus_tag=YPO3079
NC_003143.1	RefSeq	CDS	3435793	3436479	.	-	0	ID=cds2835;Name=YP_002347999.1;Parent=gene2972;Dbxref=InterPro:IPR003439,InterPro:IPR003593,UniProtKB%2FTrEMBL:Q7CJZ3,Genbank:YP_002347999.1,GeneID:1175900;gbkey=CDS;gene=ybbA;product=ABC transporter ATP-binding protein YbbA;protein_id=YP_002347999.1;transl_table=11
NC_003143.1	RefSeq	region	3435997	3436041	.	-	.	ID=id2231;Note=PS00211 ABC transporters family signature.;Dbxref=GeneID:1175900;gbkey=misc_feature;gene=ybbA
NC_003143.1	RefSeq	gene	3436447	3437085	.	+	.	ID=gene2973;Name=tesA;Dbxref=GeneID:1175901;gbkey=Gene;gene=tesA;gene_synonym=pldC,tesA;locus_tag=YPO3080
NC_003143.1	RefSeq	CDS	3436447	3437085	.	+	0	ID=cds2836;Name=YP_002348000.1;Parent=gene2973;Dbxref=InterPro:IPR001087,InterPro:IPR008265,InterPro:IPR013830,InterPro:IPR013831,UniProtKB%2FTrEMBL:Q0WCI8,Genbank:YP_002348000.1,GeneID:1175901;gbkey=CDS;gene=tesA;product=multifunctional acyl-CoA thioesterase I%2Fprotease I%2Flysophospholipase L1;protein_id=YP_002348000.1;transl_table=11
NC_003143.1	RefSeq	region	3436537	3436569	.	+	.	ID=id2232;Note=PS01098 Lipolytic enzymes %27G-D-S-L%27 family%2C serine active site.;Dbxref=GeneID:1175901;gbkey=misc_feature;gene=tesA
NC_003143.1	RefSeq	gene	3437472	3438248	.	+	.	ID=gene2974;Name=ybbO;Dbxref=GeneID:1175902;gbkey=Gene;gene=ybbO;locus_tag=YPO3081
NC_003143.1	RefSeq	CDS	3437472	3438248	.	+	0	ID=cds2837;Name=YP_002348001.1;Parent=gene2974;Dbxref=InterPro:IPR002198,InterPro:IPR002347,UniProtKB%2FTrEMBL:Q7CJZ4,Genbank:YP_002348001.1,GeneID:1175902;gbkey=CDS;gene=ybbO;product=short chain dehydrogenase;protein_id=YP_002348001.1;transl_table=11
NC_003143.1	RefSeq	region	3437868	3437954	.	+	.	ID=id2233;Note=PS00061 Short-chain dehydrogenases%2Freductases family signature.;Dbxref=GeneID:1175902;gbkey=misc_feature;gene=ybbO
NC_003143.1	RefSeq	gene	3438325	3439194	.	+	.	ID=gene2975;Name=ybbN;Dbxref=GeneID:1175903;gbkey=Gene;gene=ybbN;locus_tag=YPO3082
NC_003143.1	RefSeq	CDS	3438325	3439194	.	+	0	ID=cds2838;Name=YP_002348002.1;Parent=gene2975;Dbxref=InterPro:IPR011990,InterPro:IPR012335,InterPro:IPR012336,InterPro:IPR013766,UniProtKB%2FTrEMBL:Q7CJZ5,Genbank:YP_002348002.1,GeneID:1175903;gbkey=CDS;gene=ybbN;product=thioredoxin;protein_id=YP_002348002.1;transl_table=11
NC_003143.1	RefSeq	region	3438616	3438645	.	+	.	ID=id2234;Note=PS00215 Mitochondrial energy transfer proteins signature.;Dbxref=GeneID:1175903;gbkey=misc_feature;gene=ybbN
NC_003143.1	RefSeq	gene	3439389	3440303	.	+	.	ID=gene2976;Name=YPO3083;Dbxref=GeneID:1175904;gbkey=Gene;locus_tag=YPO3083
NC_003143.1	RefSeq	CDS	3439389	3440303	.	+	0	ID=cds2839;Name=YP_002348003.1;Parent=gene2976;Dbxref=InterPro:IPR001107,InterPro:IPR001972,UniProtKB%2FTrEMBL:Q7CJZ6,Genbank:YP_002348003.1,GeneID:1175904;gbkey=CDS;product=hypothetical protein;protein_id=YP_002348003.1;transl_table=11
NC_003143.1	RefSeq	region	3439782	3439868	.	+	.	ID=id2235;Note=PS01270 Band 7 protein family signature.;Dbxref=GeneID:1175904;gbkey=misc_feature
NC_003143.1	RefSeq	gene	3440306	3440755	.	+	.	ID=gene2977;Name=ybbJ;Dbxref=GeneID:1175905;gbkey=Gene;gene=ybbJ;locus_tag=YPO3084
NC_003143.1	RefSeq	CDS	3440306	3440755	.	+	0	ID=cds2840;Name=YP_002348004.1;Parent=gene2977;Dbxref=InterPro:IPR002810,UniProtKB%2FTrEMBL:Q7CJZ7,Genbank:YP_002348004.1,GeneID:1175905;gbkey=CDS;gene=ybbJ;product=hypothetical protein;protein_id=YP_002348004.1;transl_table=11
NC_003143.1	RefSeq	gene	3440864	3441283	.	-	.	ID=gene2978;Name=cueR;Dbxref=GeneID:1175906;gbkey=Gene;gene=cueR;locus_tag=YPO3085
NC_003143.1	RefSeq	CDS	3440864	3441283	.	-	0	ID=cds2841;Name=YP_002348005.1;Parent=gene2978;Dbxref=InterPro:IPR000551,InterPro:IPR009061,InterPro:IPR011789,UniProtKB%2FTrEMBL:Q0WCI3,Genbank:YP_002348005.1,GeneID:1175906;gbkey=CDS;gene=cueR;product=regulatory protein;protein_id=YP_002348005.1;transl_table=11
NC_003143.1	RefSeq	gene	3441490	3444375	.	+	.	ID=gene2979;Name=copA;Dbxref=GeneID:1175907;gbkey=Gene;gene=copA;locus_tag=YPO3086
NC_003143.1	RefSeq	CDS	3441490	3444375	.	+	0	ID=cds2842;Name=YP_002348006.1;Parent=gene2979;Dbxref=InterPro:IPR000150,InterPro:IPR000695,InterPro:IPR001757,InterPro:IPR005834,InterPro:IPR006121,InterPro:IPR006403,InterPro:IPR006416,InterPro:IPR008250,UniProtKB%2FTrEMBL:Q0WCI2,Genbank:YP_002348006.1,GeneID:1175907;gbkey=CDS;gene=copA;product=copper exporting ATPase;protein_id=YP_002348006.1;transl_table=11
NC_003143.1	RefSeq	region	3441514	3441603	.	+	.	ID=id2236;Note=PS01047 Heavy-metal-associated domain.;Dbxref=GeneID:1175907;gbkey=misc_feature;gene=copA
NC_003143.1	RefSeq	region	3441712	3441801	.	+	.	ID=id2237;Note=PS01047 Heavy-metal-associated domain.;Dbxref=GeneID:1175907;gbkey=misc_feature;gene=copA
NC_003143.1	RefSeq	region	3442183	3442272	.	+	.	ID=id2238;Note=PS01047 Heavy-metal-associated domain.;Dbxref=GeneID:1175907;gbkey=misc_feature;gene=copA
NC_003143.1	RefSeq	region	3443437	3443457	.	+	.	ID=id2239;Note=PS00154 E1-E2 ATPases phosphorylation site.;Dbxref=GeneID:1175907;gbkey=misc_feature;gene=copA
NC_003143.1	RefSeq	region	3444022	3444090	.	+	.	ID=id2240;Note=PS01229 Hypothetical cof family signature 2.;Dbxref=GeneID:1175907;gbkey=misc_feature;gene=copA
NC_003143.1	RefSeq	region	3444133	3444198	.	+	.	ID=id2241;Note=Predicted helix-turn-helix motif with score 1013 %28%2B2.64 SD%29 at aa 882-903%2C sequence HSLYGVVDAVELSKATLRNMKQ;Dbxref=GeneID:1175907;gbkey=misc_feature;gene=copA
NC_003143.1	RefSeq	gene	3444896	3445705	.	+	.	ID=gene2980;Name=YPO3087;Dbxref=GeneID:1175908;gbkey=Gene;locus_tag=YPO3087
NC_003143.1	RefSeq	CDS	3444896	3445705	.	+	0	ID=cds2843;Name=YP_002348007.1;Parent=gene2980;Dbxref=InterPro:IPR010891,UniProtKB%2FTrEMBL:Q7CJZ8,Genbank:YP_002348007.1,GeneID:1175908;gbkey=CDS;product=hypothetical protein;protein_id=YP_002348007.1;transl_table=11
NC_003143.1	RefSeq	gene	3445969	3446448	.	+	.	ID=gene2981;Name=YPO3088;Dbxref=GeneID:1175909;gbkey=Gene;locus_tag=YPO3088
NC_003143.1	RefSeq	CDS	3445969	3446448	.	+	0	ID=cds2844;Name=YP_002348008.1;Parent=gene2981;Dbxref=InterPro:IPR004369,InterPro:IPR007214,UniProtKB%2FTrEMBL:Q0WCI0,Genbank:YP_002348008.1,GeneID:1175909;gbkey=CDS;product=hypothetical protein;protein_id=YP_002348008.1;transl_table=11
NC_003143.1	RefSeq	gene	3446740	3447024	.	+	.	ID=gene2982;Name=YPO3089;Dbxref=GeneID:1175910;gbkey=Gene;locus_tag=YPO3089
NC_003143.1	RefSeq	CDS	3446740	3447024	.	+	0	ID=cds2845;Name=YP_002348009.1;Parent=gene2982;Note=no significant database hits;Dbxref=UniProtKB%2FTrEMBL:Q7CJZ9,Genbank:YP_002348009.1,GeneID:1175910;gbkey=CDS;product=hypothetical protein;protein_id=YP_002348009.1;transl_table=11
NC_003143.1	RefSeq	gene	3447128	3448783	.	-	.	ID=gene2983;Name=ushA;Dbxref=GeneID:1175911;gbkey=Gene;gene=ushA;locus_tag=YPO3090;pseudo=true
NC_003143.1	RefSeq	region	3448423	3448458	.	-	.	ID=id2242;Note=PS00786 5%27-nucleotidase signature 2.;Dbxref=GeneID:1175911;gbkey=misc_feature;gene=ushA
NC_003143.1	RefSeq	region	3448646	3448684	.	-	.	ID=id2243;Note=PS00785 5%27-nucleotidase signature 1.;Dbxref=GeneID:1175911;gbkey=misc_feature;gene=ushA
NC_003143.1	RefSeq	gene	3449065	3450279	.	+	.	ID=gene2984;Name=fsr;Dbxref=GeneID:1175912;gbkey=Gene;gene=fsr;gene_synonym=rosA;locus_tag=YPO3093
NC_003143.1	RefSeq	CDS	3449065	3450279	.	+	0	ID=cds2846;Name=YP_002348010.1;Parent=gene2984;Dbxref=InterPro:IPR007114,InterPro:IPR011701,UniProtKB%2FTrEMBL:Q7CK00,Genbank:YP_002348010.1,GeneID:1175912;gbkey=CDS;gene=fsr;product=membrane efflux protein;protein_id=YP_002348010.1;transl_table=11
NC_003143.1	RefSeq	gene	3450514	3452205	.	+	.	ID=gene2985;Name=rosB;Dbxref=GeneID:1175913;gbkey=Gene;gene=rosB;gene_synonym=ybaL;locus_tag=YPO3094
NC_003143.1	RefSeq	CDS	3450514	3452205	.	+	0	ID=cds2847;Name=YP_002348011.1;Parent=gene2985;Note=YbaL%3B member of the CPA-2 family of antiporters%3B uncharacterized protein;Dbxref=InterPro:IPR003148,InterPro:IPR004771,InterPro:IPR006153,UniProtKB%2FTrEMBL:Q7CK01,Genbank:YP_002348011.1,GeneID:1175913;gbkey=CDS;gene=rosB;product=cation:proton antiport protein;protein_id=YP_002348011.1;transl_table=11
NC_003143.1	RefSeq	region	3451441	3451464	.	+	.	ID=id2244;Note=PS00017 ATP%2FGTP-binding site motif A %28P-loop%29.;Dbxref=GeneID:1175913;gbkey=misc_feature;gene=rosB
NC_003143.1	RefSeq	gene	3452302	3453606	.	-	.	ID=gene2986;Name=gsk;Dbxref=GeneID:1175914;gbkey=Gene;gene=gsk;locus_tag=YPO3095
NC_003143.1	RefSeq	CDS	3452302	3453606	.	-	0	ID=cds2848;Name=YP_002348012.1;Parent=gene2986;Dbxref=InterPro:IPR002173,InterPro:IPR011611,UniProtKB%2FTrEMBL:Q7CK02,Genbank:YP_002348012.1,GeneID:1175914;gbkey=CDS;gene=gsk;product=inosine-guanosine kinase;protein_id=YP_002348012.1;transl_table=11
NC_003143.1	RefSeq	region	3452512	3452553	.	-	.	ID=id2245;Note=PS00584 pfkB family of carbohydrate kinases signature 2.;Dbxref=GeneID:1175914;gbkey=misc_feature;gene=gsk
NC_003143.1	RefSeq	gene	3453810	3454961	.	-	.	ID=gene2987;Name=wzz;Dbxref=GeneID:1175915;gbkey=Gene;gene=wzz;locus_tag=YPO3096
NC_003143.1	RefSeq	CDS	3453810	3454961	.	-	0	ID=cds2849;Name=YP_002348013.1;Parent=gene2987;Note=part of the ferric enterobactin transport system%3B necessary for enetrobactin uptake;Dbxref=InterPro:IPR003856,UniProtKB%2FTrEMBL:Q9RCC2,Genbank:YP_002348013.1,GeneID:1175915;gbkey=CDS;gene=wzz;product=ferric enterobactin transport protein FepE;protein_id=YP_002348013.1;transl_table=11
NC_003143.1	RefSeq	gene	3455009	3456382	.	-	.	ID=gene2988;Name=manB;Dbxref=GeneID:1175916;gbkey=Gene;gene=manB;gene_synonym=rfbK;locus_tag=YPO3097
NC_003143.1	RefSeq	CDS	3455009	3456382	.	-	0	ID=cds2850;Name=YP_002348014.1;Parent=gene2988;Dbxref=InterPro:IPR005841,InterPro:IPR005843,InterPro:IPR005844,InterPro:IPR005845,InterPro:IPR005846,UniProtKB%2FTrEMBL:Q9RCC3,Genbank:YP_002348014.1,GeneID:1175916;gbkey=CDS;gene=manB;product=phosphomannomutase;protein_id=YP_002348014.1;transl_table=11
NC_003143.1	RefSeq	region	3456065	3456109	.	-	.	ID=id2246;Note=PS00710 Phosphoglucomutase and phosphomannomutase phosphoserine signature.;Dbxref=GeneID:1175916;gbkey=misc_feature;gene=manB
NC_003143.1	RefSeq	gene	3456387	3457130	.	-	.	ID=gene2989;Name=wbyL;Dbxref=GeneID:1175917;gbkey=Gene;gene=wbyL;locus_tag=YPO3098
NC_003143.1	RefSeq	CDS	3456387	3457130	.	-	0	ID=cds2851;Name=YP_002348015.1;Parent=gene2989;Dbxref=InterPro:IPR001173,UniProtKB%2FTrEMBL:Q9RCC4,Genbank:YP_002348015.1,GeneID:1175917;gbkey=CDS;gene=wbyL;product=glycosyltransferase;protein_id=YP_002348015.1;transl_table=11
NC_003143.1	RefSeq	gene	3457133	3458545	.	-	.	ID=gene2990;Name=manC;Dbxref=GeneID:1175918;gbkey=Gene;gene=manC;gene_synonym=rfbM;locus_tag=YPO3099
NC_003143.1	RefSeq	CDS	3457133	3458545	.	-	0	ID=cds2852;Name=YP_002348016.1;Parent=gene2990;Dbxref=InterPro:IPR001538,InterPro:IPR005835,InterPro:IPR006375,InterPro:IPR011051,InterPro:IPR013794,UniProtKB%2FTrEMBL:Q7CK05,Genbank:YP_002348016.1,GeneID:1175918;gbkey=CDS;gene=manC;product=mannose-1-phosphate guanylyltransferase;protein_id=YP_002348016.1;transl_table=11
NC_003143.1	RefSeq	gene	3458733	3459697	.	-	.	ID=gene2991;Name=fcL;Dbxref=GeneID:1175919;gbkey=Gene;gene=fcL;gene_synonym=wbcJ;locus_tag=YPO3100;pseudo=true
NC_003143.1	RefSeq	gene	3459703	3460825	.	-	.	ID=gene2992;Name=gmd;Dbxref=GeneID:1175920;gbkey=Gene;gene=gmd;locus_tag=YPO3102;pseudo=true
NC_003143.1	RefSeq	gene	3460841	3461854	.	-	.	ID=gene2993;Name=wbyK;Dbxref=GeneID:1175921;gbkey=Gene;gene=wbyK;locus_tag=YPO3104
NC_003143.1	RefSeq	CDS	3460841	3461854	.	-	0	ID=cds2853;Name=YP_002348017.1;Parent=gene2993;Dbxref=InterPro:IPR001296,UniProtKB%2FTrEMBL:Q9RCC6,Genbank:YP_002348017.1,GeneID:1175921;gbkey=CDS;gene=wbyK;product=mannosyltransferase;protein_id=YP_002348017.1;transl_table=11
NC_003143.1	RefSeq	gene	3462103	3463324	.	-	.	ID=gene2994;Name=wzy;Dbxref=GeneID:1175922;gbkey=Gene;gene=wzy;locus_tag=YPO3105;pseudo=true
NC_003143.1	RefSeq	region	3463256	3463288	.	-	.	ID=id2247;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site.;Dbxref=GeneID:1175922;gbkey=misc_feature;gene=wzy
NC_003143.1	RefSeq	gene	3463321	3464463	.	-	.	ID=gene2995;Name=wbyJ;Dbxref=GeneID:1175923;gbkey=Gene;gene=wbyJ;locus_tag=YPO3107
NC_003143.1	RefSeq	CDS	3463321	3464463	.	-	0	ID=cds2854;Name=YP_002348018.1;Parent=gene2995;Dbxref=UniProtKB%2FTrEMBL:Q7CK06,Genbank:YP_002348018.1,GeneID:1175923;gbkey=CDS;gene=wbyJ;product=mannosyltransferase;protein_id=YP_002348018.1;transl_table=11
NC_003143.1	RefSeq	gene	3464635	3465556	.	-	.	ID=gene2996;Name=wbyI;Dbxref=GeneID:1175924;gbkey=Gene;gene=wbyI;locus_tag=YPO3108;pseudo=true
NC_003143.1	RefSeq	gene	3465567	3466910	.	-	.	ID=gene2997;Name=wzx;Dbxref=GeneID:1175925;gbkey=Gene;gene=wzx;locus_tag=YPO3110
NC_003143.1	RefSeq	CDS	3465567	3466910	.	-	0	ID=cds2855;Name=YP_002348019.1;Parent=gene2997;Dbxref=UniProtKB%2FTrEMBL:Q9RCC7,Genbank:YP_002348019.1,GeneID:1175925;gbkey=CDS;gene=wzx;product=O-unit flippase;protein_id=YP_002348019.1;transl_table=11
NC_003143.1	RefSeq	gene	3466984	3468267	.	-	.	ID=gene2998;Name=wbyH;Dbxref=GeneID:1175926;gbkey=Gene;gene=wbyH;locus_tag=YPO3111
NC_003143.1	RefSeq	CDS	3466984	3468267	.	-	0	ID=cds2856;Name=YP_002348020.1;Parent=gene2998;Dbxref=InterPro:IPR009025,UniProtKB%2FTrEMBL:Q9RCC8,Genbank:YP_002348020.1,GeneID:1175926;gbkey=CDS;gene=wbyH;product=hypothetical protein;protein_id=YP_002348020.1;transl_table=11
NC_003143.1	RefSeq	gene	3468268	3469125	.	-	.	ID=gene2999;Name=prt;Dbxref=GeneID:1175927;gbkey=Gene;gene=prt;gene_synonym=rfbS;locus_tag=YPO3112
NC_003143.1	RefSeq	CDS	3468268	3469125	.	-	0	ID=cds2857;Name=YP_002348021.1;Parent=gene2999;Dbxref=InterPro:IPR001509,UniProtKB%2FTrEMBL:Q9RCC9,Genbank:YP_002348021.1,GeneID:1175927;gbkey=CDS;gene=prt;product=paratose synthase;protein_id=YP_002348021.1;transl_table=11
NC_003143.1	RefSeq	gene	3469162	3470475	.	-	.	ID=gene3000;Name=ddhC;Dbxref=GeneID:1175928;gbkey=Gene;gene=ddhC;locus_tag=YPO3113
NC_003143.1	RefSeq	CDS	3469162	3470475	.	-	0	ID=cds2858;Name=YP_002348022.1;Parent=gene3000;Dbxref=InterPro:IPR000653,UniProtKB%2FTrEMBL:Q9RCD0,Genbank:YP_002348022.1,GeneID:1175928;gbkey=CDS;gene=ddhC;product=CDP-4-keto-6-deoxy-D-glucose-3-dehydratase;protein_id=YP_002348022.1;transl_table=11
NC_003143.1	RefSeq	gene	3470493	3471568	.	-	.	ID=gene3001;Name=ascB;Dbxref=GeneID:1175929;gbkey=Gene;gene=ascB;gene_synonym=ddhB,rfbG;locus_tag=YPO3114;pseudo=true
NC_003143.1	RefSeq	gene	3471573	3472358	.	-	.	ID=gene3002;Name=ddhA;Dbxref=GeneID:1175930;gbkey=Gene;gene=ddhA;gene_synonym=rfbF;locus_tag=YPO3115
NC_003143.1	RefSeq	CDS	3471573	3472358	.	-	0	ID=cds2859;Name=YP_002348023.1;Parent=gene3002;Dbxref=InterPro:IPR005835,InterPro:IPR013446,UniProtKB%2FTrEMBL:Q7CK09,Genbank:YP_002348023.1,GeneID:1175930;gbkey=CDS;gene=ddhA;product=glucose-1-phosphate cytidylyltransferase;protein_id=YP_002348023.1;transl_table=11
NC_003143.1	RefSeq	gene	3472384	3473373	.	-	.	ID=gene3003;Name=ddhD;Dbxref=GeneID:1175931;gbkey=Gene;gene=ddhD;gene_synonym=rfbI;locus_tag=YPO3116
NC_003143.1	RefSeq	CDS	3472384	3473373	.	-	0	ID=cds2860;Name=YP_002348024.1;Parent=gene3003;Note=catalyzes the formation of 3%2C6-dideoxy-D-glycero-D-glycero-4-hexulose;Dbxref=InterPro:IPR001041,InterPro:IPR001221,InterPro:IPR001433,InterPro:IPR001709,InterPro:IPR006058,InterPro:IPR008333,InterPro:IPR012254,InterPro:IPR012675,UniProtKB%2FTrEMBL:Q7B0V7,Genbank:YP_002348024.1,GeneID:1175931;gbkey=CDS;gene=ddhD;product=CDP-6-deoxy-delta-3%2C4-glucoseen reductase;protein_id=YP_002348024.1;transl_table=11
NC_003143.1	RefSeq	region	3473239	3473265	.	-	.	ID=id2248;Note=PS00197 2Fe-2S ferredoxins%2C iron-sulfur binding region signature.;Dbxref=GeneID:1175931;gbkey=misc_feature;gene=ddhD
NC_003143.1	RefSeq	gene	3473971	3474933	.	-	.	ID=gene3004;Name=hemH;Dbxref=GeneID:1175932;gbkey=Gene;gene=hemH;gene_synonym=popA,visA;locus_tag=YPO3117
NC_003143.1	RefSeq	CDS	3473971	3474933	.	-	0	ID=cds2861;Name=YP_002348025.1;Parent=gene3004;Note=protoheme ferro-lyase%3B catalyzes the insertion of a ferrous ion into protoporphyrin IX to form protoheme%3B involved in protoheme biosynthesis%3B in some organisms this protein is membrane-associated while in others it is cytosolic;Dbxref=InterPro:IPR001015,UniProtKB%2FTrEMBL:Q0WCG3,Genbank:YP_002348025.1,GeneID:1175932;gbkey=CDS;gene=hemH;product=ferrochelatase;protein_id=YP_002348025.1;transl_table=11
NC_003143.1	RefSeq	region	3474313	3474369	.	-	.	ID=id2249;Note=PS00534 Ferrochelatase signature.;Dbxref=GeneID:1175932;gbkey=misc_feature;gene=hemH
NC_003143.1	RefSeq	gene	3475023	3475667	.	-	.	ID=gene3005;Name=adk;Dbxref=GeneID:1175933;gbkey=Gene;gene=adk;gene_synonym=dnaW,plsA;locus_tag=YPO3118
NC_003143.1	RefSeq	CDS	3475023	3475667	.	-	0	ID=cds2862;Name=YP_002348026.1;Parent=gene3005;Note=essential enzyme that recycles AMP in active cells%3B converts ATP and AMP to two molecules of ADP;Dbxref=InterPro:IPR000850,InterPro:IPR006259,InterPro:IPR007862,InterPro:IPR011769,UniProtKB%2FTrEMBL:Q0WCG2,Genbank:YP_002348026.1,GeneID:1175933;gbkey=CDS;gene=adk;product=adenylate kinase;protein_id=YP_002348026.1;transl_table=11
NC_003143.1	RefSeq	region	3475392	3475427	.	-	.	ID=id2250;Note=PS00113 Adenylate kinase signature.;Dbxref=GeneID:1175933;gbkey=misc_feature;gene=adk
NC_003143.1	RefSeq	gene	3475894	3477768	.	-	.	ID=gene3006;Name=htpG;Dbxref=GeneID:1175934;gbkey=Gene;gene=htpG;locus_tag=YPO3119
NC_003143.1	RefSeq	CDS	3475894	3477768	.	-	0	ID=cds2863;Name=YP_002348027.1;Parent=gene3006;Note=molecular chaperone;Dbxref=InterPro:IPR001404,InterPro:IPR003594,UniProtKB%2FTrEMBL:Q0WCG1,Genbank:YP_002348027.1,GeneID:1175934;gbkey=CDS;gene=htpG;product=heat shock protein 90;protein_id=YP_002348027.1;transl_table=11
NC_003143.1	RefSeq	region	3477661	3477690	.	-	.	ID=id2251;Note=PS00298 Heat shock hsp90 proteins family signature.;Dbxref=GeneID:1175934;gbkey=misc_feature;gene=htpG
NC_003143.1	RefSeq	gene	3477960	3478565	.	-	.	ID=gene3007;Name=recR;Dbxref=GeneID:1175935;gbkey=Gene;gene=recR;locus_tag=YPO3120
NC_003143.1	RefSeq	CDS	3477960	3478565	.	-	0	ID=cds2864;Name=YP_002348028.1;Parent=gene3007;Note=involved in a recombinational process of DNA repair%2C independent of the recBC complex;Dbxref=InterPro:IPR000093,InterPro:IPR006154,InterPro:IPR006171,UniProtKB%2FTrEMBL:Q0WCG0,Genbank:YP_002348028.1,GeneID:1175935;gbkey=CDS;gene=recR;product=recombination protein RecR;protein_id=YP_002348028.1;transl_table=11
NC_003143.1	RefSeq	region	3478335	3478397	.	-	.	ID=id2252;Note=PS01300 RecR protein signature.;Dbxref=GeneID:1175935;gbkey=misc_feature;gene=recR
NC_003143.1	RefSeq	gene	3478565	3478897	.	-	.	ID=gene3008;Name=recR;Dbxref=GeneID:1175936;gbkey=Gene;gene=recR;locus_tag=YPO3121
NC_003143.1	RefSeq	CDS	3478565	3478897	.	-	0	ID=cds2865;Name=YP_002348029.1;Parent=gene3008;Dbxref=InterPro:IPR004401,UniProtKB%2FTrEMBL:Q0WCF9,Genbank:YP_002348029.1,GeneID:1175936;gbkey=CDS;product=hypothetical protein;protein_id=YP_002348029.1;transl_table=11
NC_003143.1	RefSeq	gene	3478953	3480929	.	-	.	ID=gene3009;Name=dnaX;Dbxref=GeneID:1175937;gbkey=Gene;gene=dnaX;gene_synonym=dnaZ,dnaZX;locus_tag=YPO3122
NC_003143.1	RefSeq	CDS	3478953	3480929	.	-	0	ID=cds2866;Name=YP_002348030.1;Parent=gene3009;Note=catalyzes the DNA-template-directed extension of the 3%27-end of a DNA strand%3B the tau chain serves as a scaffold to help in the dimerizaton of the alpha%2Cepsilon and theta core complex%3B the gamma chain seems to interact with the delta and delta%27 subunits to transfer the beta subunit on the DNA;Dbxref=InterPro:IPR001270,InterPro:IPR003593,InterPro:IPR003959,InterPro:IPR008921,InterPro:IPR012763,UniProtKB%2FTrEMBL:Q7CK10,Genbank:YP_002348030.1,GeneID:1175937;gbkey=CDS;gene=dnaX;product=DNA polymerase III subunits gamma and tau;protein_id=YP_002348030.1;transl_table=11
NC_003143.1	RefSeq	region	3480774	3480797	.	-	.	ID=id2253;Note=PS00017 ATP%2FGTP-binding site motif A %28P-loop%29.;Dbxref=GeneID:1175937;gbkey=misc_feature;gene=dnaX
NC_003143.1	RefSeq	gene	3481585	3482148	.	-	.	ID=gene3010;Name=apt;Dbxref=GeneID:1175938;gbkey=Gene;gene=apt;locus_tag=YPO3123
NC_003143.1	RefSeq	CDS	3481585	3482148	.	-	0	ID=cds2867;Name=YP_002348031.1;Parent=gene3010;Note=catalyzes a salvage reaction resulting in the formation of AMP which is metabolically less costly than a de novo synthesis;Dbxref=InterPro:IPR000836,InterPro:IPR002375,InterPro:IPR005764,UniProtKB%2FTrEMBL:Q0WCF7,Genbank:YP_002348031.1,GeneID:1175938;gbkey=CDS;gene=apt;product=adenine phosphoribosyltransferase;protein_id=YP_002348031.1;transl_table=11
NC_003143.1	RefSeq	region	3481735	3481773	.	-	.	ID=id2254;Note=PS00103 Purine%2Fpyrimidine phosphoribosyl transferases signature.;Dbxref=GeneID:1175938;gbkey=misc_feature;gene=apt
NC_003143.1	RefSeq	repeat_region	3482499	3484450	.	-	.	ID=id2255;Note=truncated insertion sequence:IS100;gbkey=repeat_region
NC_003143.1	RefSeq	repeat_region	3482499	3482526	.	+	.	ID=id2256;Note=IS100 inverted repeat;gbkey=repeat_region
NC_003143.1	RefSeq	gene	3482565	3484364	.	-	.	ID=gene3011;Name=YPO3125;Dbxref=GeneID:1175939;gbkey=Gene;locus_tag=YPO3125;pseudo=true
NC_003143.1	RefSeq	region	3482565	3484364	.	-	.	ID=id2257;Note=A fusion of the two CDS carried on IS100. The N-terminus is similar to Escherichia coli transposase for insertion sequence element IS21 IstA SW:ISTA_ECOLI %28P15025%29 %28390 aa%29 fasta scores: E%28%29: 8.8e-25%2C 34.1%25 id in 308 aa and the C-terminus is similar to Escherichia coli insertion sequence IS21  ATP-binding protein SW:ISTB_ECOLI %28P15026%29 %28265 aa%29 fasta scores: E%28%29: 0%2C 47.4%25 id in 249 aa.;Dbxref=PSEUDO:CAL21720.1,GeneID:1175939;gbkey=misc_feature;pseudo=true
NC_003143.1	RefSeq	region	3482997	3483020	.	-	.	ID=id2258;Note=PS00017 ATP%2FGTP-binding site motif A %28P-loop%29.;Dbxref=GeneID:1175939;gbkey=misc_feature
NC_003143.1	RefSeq	region	3484248	3484313	.	-	.	ID=id2259;Note=Predicted helix-turn-helix motif with score 2147 %28%2B6.50 SD%29 at aa 18-39%2C sequence MSSRAIARELGISRNTVKRYLQ;Dbxref=GeneID:1175939;gbkey=misc_feature
NC_003143.1	RefSeq	repeat_region	3484423	3484450	.	-	.	ID=id2260;Note=IS100 inverted repeat;gbkey=repeat_region
NC_003143.1	RefSeq	gene	3484455	3484724	.	-	.	ID=gene3012;Name=ybaN;Dbxref=GeneID:1175940;gbkey=Gene;gene=ybaN;locus_tag=YPO3126;pseudo=true
NC_003143.1	RefSeq	region	3484455	3484724	.	-	.	ID=id2261;Note=This CDS is disrupted by the insertion of a truncated IS100 element and lacks 35 aa at the C-terminus. It is not clear whether this insertion affects the function of the protein. Similar to Escherichia coli hypothetical 14.8 kDa protein in priC-apt intergenic region YbaN SW:YBAN_ECOLI %28P45808%29 %28125 aa%29 fasta scores: E%28%29: 1.2e-28%2C75.6%25 id in 90 aa%2C and to Vibrio cholerae hypothetical protein Vc1052 TR:Q9KT53 %28EMBL:AE004187%29 %28132 aa%29 fasta scores: E%28%29: 3.1e-15%2C 47.8%25 id in 90 aa;Dbxref=GeneID:1175940;gbkey=misc_feature;gene=ybaN;pseudo=true
NC_003143.1	RefSeq	gene	3484925	3485461	.	+	.	ID=gene3013;Name=priC;Dbxref=GeneID:1175941;gbkey=Gene;gene=priC;locus_tag=YPO3127
NC_003143.1	RefSeq	CDS	3484925	3485461	.	+	0	ID=cds2868;Name=YP_002348032.1;Parent=gene3013;Dbxref=InterPro:IPR010890,UniProtKB%2FTrEMBL:Q7CK11,Genbank:YP_002348032.1,GeneID:1175941;gbkey=CDS;gene=priC;product=primosomal replication protein n%27%27;protein_id=YP_002348032.1;transl_table=11
NC_003143.1	RefSeq	gene	3485632	3485787	.	+	.	ID=gene3014;Name=YPO3128;Dbxref=GeneID:1175942;gbkey=Gene;locus_tag=YPO3128
NC_003143.1	RefSeq	CDS	3485632	3485787	.	+	0	ID=cds2869;Name=YP_002348033.1;Parent=gene3014;Dbxref=UniProtKB%2FTrEMBL:Q0WCF5,Genbank:YP_002348033.1,GeneID:1175942;gbkey=CDS;product=hypothetical protein;protein_id=YP_002348033.1;transl_table=11
NC_003143.1	RefSeq	gene	3486127	3489546	.	-	.	ID=gene3015;Name=aefA;Dbxref=GeneID:1175943;gbkey=Gene;gene=aefA;gene_synonym=kefA;locus_tag=YPO3129
NC_003143.1	RefSeq	CDS	3486127	3489546	.	-	0	ID=cds2870;Name=YP_002348034.1;Parent=gene3015;Note=small mechanosensitive ion channel %28MscS%29 that opens in response to stretch forces in the membrane lipid bilayer%3B maintains cell turgor through accumulation and release of potassium%3B large protein class of MscS;Dbxref=InterPro:IPR006685,InterPro:IPR006686,InterPro:IPR010920,InterPro:IPR011014,InterPro:IPR011066,UniProtKB%2FTrEMBL:Q7CK12,Genbank:YP_002348034.1,GeneID:1175943;gbkey=CDS;gene=aefA;product=potassium efflux protein KefA;protein_id=YP_002348034.1;transl_table=11
NC_003143.1	RefSeq	region	3486541	3486645	.	-	.	ID=id2262;Note=PS01246 Uncharacterized protein family UPF0003 signature.;Dbxref=GeneID:1175943;gbkey=misc_feature;gene=aefA
NC_003143.1	RefSeq	gene	3489786	3490139	.	-	.	ID=gene3016;Name=YPO3130;Dbxref=GeneID:1175944;gbkey=Gene;locus_tag=YPO3130
NC_003143.1	RefSeq	CDS	3489786	3490139	.	-	0	ID=cds2871;Name=YP_002348035.1;Parent=gene3016;Dbxref=InterPro:IPR003787,UniProtKB%2FTrEMBL:Q7CK13,Genbank:YP_002348035.1,GeneID:1175944;gbkey=CDS;product=hypothetical protein;protein_id=YP_002348035.1;transl_table=11
NC_003143.1	RefSeq	gene	3490152	3490808	.	-	.	ID=gene3017;Name=acrR;Dbxref=GeneID:1175945;gbkey=Gene;gene=acrR;locus_tag=YPO3131
NC_003143.1	RefSeq	CDS	3490152	3490808	.	-	0	ID=cds2872;Name=YP_002348036.1;Parent=gene3017;Note=regulates the acrAB operon which is involved in susceptibility to dephalothin and cephaloridine;Dbxref=InterPro:IPR001647,InterPro:IPR009057,InterPro:IPR011075,InterPro:IPR012287,InterPro:IPR013572,UniProtKB%2FTrEMBL:Q7CK14,Genbank:YP_002348036.1,GeneID:1175945;gbkey=CDS;gene=acrR;product=DNA-binding transcriptional repressor AcrR;protein_id=YP_002348036.1;transl_table=11
NC_003143.1	RefSeq	region	3490635	3490727	.	-	.	ID=id2263;Note=PS01081 Bacterial regulatory proteins%2C tetR family signature.;Dbxref=GeneID:1175945;gbkey=misc_feature;gene=acrR
NC_003143.1	RefSeq	region	3490650	3490715	.	-	.	ID=id2264;Note=Predicted helix-turn-helix motif with score 2223 %28%2B6.76 SD%29 at aa 32-53%2C sequence TSLTDIAIAAGVTRGAIYWHFK;Dbxref=GeneID:1175945;gbkey=misc_feature;gene=acrR
NC_003143.1	RefSeq	gene	3490953	3492140	.	+	.	ID=gene3018;Name=acrA;Dbxref=GeneID:1175946;gbkey=Gene;gene=acrA;gene_synonym=mtcA;locus_tag=YPO3132
NC_003143.1	RefSeq	CDS	3490953	3492140	.	+	0	ID=cds2873;Name=YP_002348037.1;Parent=gene3018;Dbxref=InterPro:IPR006143,InterPro:IPR008964,InterPro:IPR011053,UniProtKB%2FTrEMBL:Q7CK15,Genbank:YP_002348037.1,GeneID:1175946;gbkey=CDS;gene=acrA;product=multidrug efflux protein;protein_id=YP_002348037.1;transl_table=11
NC_003143.1	RefSeq	region	3490995	3491027	.	+	.	ID=id2265;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site.;Dbxref=GeneID:1175946;gbkey=misc_feature;gene=acrA
NC_003143.1	RefSeq	gene	3492157	3495309	.	+	.	ID=gene3019;Name=acrB;Dbxref=GeneID:1175947;gbkey=Gene;gene=acrB;gene_synonym=acrE;locus_tag=YPO3133
NC_003143.1	RefSeq	CDS	3492157	3495309	.	+	0	ID=cds2874;Name=YP_002348038.1;Parent=gene3019;Dbxref=InterPro:IPR001036,InterPro:IPR004764,UniProtKB%2FTrEMBL:Q7CK16,Genbank:YP_002348038.1,GeneID:1175947;gbkey=CDS;gene=acrB;product=multidrug efflux protein;protein_id=YP_002348038.1;transl_table=11
NC_003143.1	RefSeq	region	3494638	3494661	.	+	.	ID=id2266;Note=PS00017 ATP%2FGTP-binding site motif A %28P-loop%29.;Dbxref=GeneID:1175947;gbkey=misc_feature;gene=acrB
NC_003143.1	RefSeq	gene	3495495	3495755	.	+	.	ID=gene3020;Name=rpmE2;Dbxref=GeneID:1175948;gbkey=Gene;gene=rpmE2;locus_tag=YPO3134
NC_003143.1	RefSeq	CDS	3495495	3495755	.	+	0	ID=cds2875;Name=YP_002348039.1;Parent=gene3020;Note=RpmE2%3B there appears to be two types of ribosomal proteins L31 in bacterial genomes%3B some contain a CxxC motif while others do not%3B Bacillus subtilis has both types%3B the proteins in this cluster do not have the CXXC motif%3B RpmE is found in exponentially growing Bacilli while YtiA was found after exponential growth%3B expression of ytiA is controlled by a zinc-specific transcriptional repressor%3B RpmE contains one zinc ion and a CxxC motif is responsible for this binding%3B forms an RNP particle along with proteins L5%2C L18%2C and L25 and 5S rRNA%3B found crosslinked to L2 and L25 and EF-G%3B may be near the peptidyltransferase site of the 50S ribosome;Dbxref=InterPro:IPR002150,UniProtKB%2FTrEMBL:Q0WCE9,Genbank:YP_002348039.1,GeneID:1175948;gbkey=CDS;gene=rpmE2;product=50S ribosomal protein L31;protein_id=YP_002348039.1;transl_table=11
NC_003143.1	RefSeq	gene	3495771	3495914	.	+	.	ID=gene3021;Name=rpmJ;Dbxref=GeneID:1175949;gbkey=Gene;gene=rpmJ;locus_tag=YPO3135
NC_003143.1	RefSeq	CDS	3495771	3495914	.	+	0	ID=cds2876;Name=YP_002348040.1;Parent=gene3021;Note=smallest protein in the large subunit%3B similar to what is found with protein L31 and L33 several bacterial genomes contain paralogs which may be regulated by zinc%3B the protein from Thermus thermophilus has a zinc-binding motif and contains a bound zinc ion%3B the proteins in this group do not have the motif;Dbxref=InterPro:IPR000473,UniProtKB%2FTrEMBL:Q0WCE8,Genbank:YP_002348040.1,GeneID:1175949;gbkey=CDS;gene=rpmJ;product=50S ribosomal protein L36;protein_id=YP_002348040.1;transl_table=11
NC_003143.1	RefSeq	gene	3496788	3497141	.	+	.	ID=gene3022;Name=YPO3136;Dbxref=GeneID:1175950;gbkey=Gene;locus_tag=YPO3136
NC_003143.1	RefSeq	CDS	3496788	3497141	.	+	0	ID=cds2877;Name=YP_002348041.1;Parent=gene3022;Note=no significant database hits;Dbxref=InterPro:IPR000886,UniProtKB%2FTrEMBL:Q74WQ1,Genbank:YP_002348041.1,GeneID:1175950;gbkey=CDS;product=hypothetical protein;protein_id=YP_002348041.1;transl_table=11
NC_003143.1	RefSeq	region	3497127	3497138	.	+	.	ID=id2267;Note=PS00014 Endoplasmic reticulum targeting sequence.;Dbxref=GeneID:1175950;gbkey=misc_feature
NC_003143.1	RefSeq	gene	3497300	3497668	.	+	.	ID=gene3023;Name=YPO3137;Dbxref=GeneID:1175951;gbkey=Gene;locus_tag=YPO3137
NC_003143.1	RefSeq	CDS	3497300	3497668	.	+	0	ID=cds2878;Name=YP_002348042.1;Parent=gene3023;Dbxref=UniProtKB%2FTrEMBL:Q7CK17,Genbank:YP_002348042.1,GeneID:1175951;gbkey=CDS;product=hypothetical protein;protein_id=YP_002348042.1;transl_table=11
NC_003143.1	RefSeq	gene	3497717	3497920	.	+	.	ID=gene3024;Name=ymoA;Dbxref=GeneID:1175952;gbkey=Gene;gene=ymoA;locus_tag=YPO3138
NC_003143.1	RefSeq	CDS	3497717	3497920	.	+	0	ID=cds2879;Name=YP_002348043.1;Parent=gene3024;Note=with Hns involved in transcriptional regulation of hemolysin%3B non-specific DNA-binding protein which affects the production of multiple proteins;Dbxref=InterPro:IPR007985,UniProtKB%2FTrEMBL:Q0WCE5,Genbank:YP_002348043.1,GeneID:1175952;gbkey=CDS;gene=ymoA;product=hemolysin expression-modulating protein;protein_id=YP_002348043.1;transl_table=11
NC_003143.1	RefSeq	gene	3498454	3498573	.	-	.	ID=gene3025;Name=ffs;Dbxref=GeneID:1175953;gbkey=Gene;gene=ffs;locus_tag=YPOs06
NC_003143.1	RefSeq	ncRNA	3498454	3498573	.	-	.	ID=rna60;Parent=gene3025;Note=Similar to Escherichia coli 4.5S RNA%2C ffs%2C 85%25 identity in 103 nt overlap;Dbxref=GeneID:1175953;gbkey=ncRNA;gene=ffs;ncrna_class=SRP_RNA;product=4.5S RNA
NC_003143.1	RefSeq	exon	3498454	3498573	.	-	.	ID=id2268;Parent=rna60;Note=Similar to Escherichia coli 4.5S RNA%2C ffs%2C 85%25 identity in 103 nt overlap;Dbxref=GeneID:1175953;gbkey=ncRNA;gene=ffs;ncrna_class=SRP_RNA;product=4.5S RNA
NC_003143.1	RefSeq	gene	3498652	3499197	.	+	.	ID=gene3026;Name=YPO3139;Dbxref=GeneID:1175954;gbkey=Gene;locus_tag=YPO3139
NC_003143.1	RefSeq	CDS	3498652	3499197	.	+	0	ID=cds2880;Name=YP_002348044.1;Parent=gene3026;Dbxref=InterPro:IPR001497,InterPro:IPR011991,UniProtKB%2FTrEMBL:Q7CK18,Genbank:YP_002348044.1,GeneID:1175954;gbkey=CDS;product=6-O-methylguanine-DNA methyltransferase;protein_id=YP_002348044.1;transl_table=11
NC_003143.1	RefSeq	gene	3499333	3499854	.	-	.	ID=gene3027;Name=ybaY;Dbxref=GeneID:1175955;gbkey=Gene;gene=ybaY;locus_tag=YPO3140
NC_003143.1	RefSeq	CDS	3499333	3499854	.	-	0	ID=cds2881;Name=YP_002348045.1;Parent=gene3027;Dbxref=UniProtKB%2FTrEMBL:Q7CK19,Genbank:YP_002348045.1,GeneID:1175955;gbkey=CDS;gene=ybaY;product=lipoprotein;protein_id=YP_002348045.1;transl_table=11
NC_003143.1	RefSeq	region	3499780	3499812	.	-	.	ID=id2269;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site.;Dbxref=GeneID:1175955;gbkey=misc_feature;gene=ybaY
NC_003143.1	RefSeq	gene	3500111	3500971	.	+	.	ID=gene3028;Name=tesB;Dbxref=GeneID:1175956;gbkey=Gene;gene=tesB;locus_tag=YPO3141
NC_003143.1	RefSeq	CDS	3500111	3500971	.	+	0	ID=cds2882;Name=YP_002348046.1;Parent=gene3028;Dbxref=InterPro:IPR003703,UniProtKB%2FTrEMBL:Q0WCE2,Genbank:YP_002348046.1,GeneID:1175956;gbkey=CDS;gene=tesB;product=acyl-CoA thioesterase;protein_id=YP_002348046.1;transl_table=11
NC_003143.1	RefSeq	gene	3501231	3502526	.	-	.	ID=gene3029;Name=amtB;Dbxref=GeneID:1175957;gbkey=Gene;gene=amtB;locus_tag=YPO3142
NC_003143.1	RefSeq	CDS	3501231	3502526	.	-	0	ID=cds2883;Name=YP_002348047.1;Parent=gene3029;Dbxref=InterPro:IPR001905,InterPro:IPR010256,UniProtKB%2FTrEMBL:Q7CK20,Genbank:YP_002348047.1,GeneID:1175957;gbkey=CDS;gene=amtB;product=ammonium transporter;protein_id=YP_002348047.1;transl_table=11
NC_003143.1	RefSeq	region	3501897	3501974	.	-	.	ID=id2270;Note=PS01219 Ammonium transporters signature.;Dbxref=GeneID:1175957;gbkey=misc_feature;gene=amtB
NC_003143.1	RefSeq	gene	3502560	3502898	.	-	.	ID=gene3030;Name=glnK;Dbxref=GeneID:1175958;gbkey=Gene;gene=glnK;locus_tag=YPO3143
NC_003143.1	RefSeq	CDS	3502560	3502898	.	-	0	ID=cds2884;Name=YP_002348048.1;Parent=gene3030;Note=indirectly regulates nitrogen metabolism%3B at high nitrogen levels P-II 2 prevents the phosphorylation of NR-I%2C the transcriptional activator of the glutamine synthetase gene %28glnA%29%3B at low nitrogen levels P-II 2 is uridylylated to form PII-UMP and interacts with an adenylyltransferase %28GlnE%29 that activates GlnA%3B functionally it is equivalent to protein P-II %28GlnB%29%2C but itsexpression is driven by the presence of uridylyltransferase%2C nitrogen regulator I%2C and the absence of ammonia.;Dbxref=InterPro:IPR002187,InterPro:IPR002332,UniProtKB%2FTrEMBL:Q7CK21,Genbank:YP_002348048.1,GeneID:1175958;gbkey=CDS;gene=glnK;product=nitrogen regulatory protein P-II 2;protein_id=YP_002348048.1;transl_table=11
NC_003143.1	RefSeq	region	3502611	3502652	.	-	.	ID=id2271;Note=PS00638 P-II protein C-terminal region signature.;Dbxref=GeneID:1175958;gbkey=misc_feature;gene=glnK
NC_003143.1	RefSeq	region	3502746	3502763	.	-	.	ID=id2272;Note=PS00496 P-II protein urydylation site.;Dbxref=GeneID:1175958;gbkey=misc_feature;gene=glnK
NC_003143.1	RefSeq	gene	3503308	3505131	.	-	.	ID=gene3031;Name=mdlB;Dbxref=GeneID:1175959;gbkey=Gene;gene=mdlB;locus_tag=YPO3144
NC_003143.1	RefSeq	CDS	3503308	3505131	.	-	0	ID=cds2885;Name=YP_002348049.1;Parent=gene3031;Dbxref=InterPro:IPR001140,InterPro:IPR003439,InterPro:IPR003593,InterPro:IPR011527,UniProtKB%2FTrEMBL:Q0WCD9,Genbank:YP_002348049.1,GeneID:1175959;gbkey=CDS;gene=mdlB;product=multidrug transporter membrane%5CATP-binding components;protein_id=YP_002348049.1;transl_table=11
NC_003143.1	RefSeq	region	3503659	3503703	.	-	.	ID=id2273;Note=PS00211 ABC transporters family signature.;Dbxref=GeneID:1175959;gbkey=misc_feature;gene=mdlB
NC_003143.1	RefSeq	region	3503989	3504012	.	-	.	ID=id2274;Note=PS00017 ATP%2FGTP-binding site motif A %28P-loop%29.;Dbxref=GeneID:1175959;gbkey=misc_feature;gene=mdlB
NC_003143.1	RefSeq	gene	3505124	3506890	.	-	.	ID=gene3032;Name=mdlA;Dbxref=GeneID:1175960;gbkey=Gene;gene=mdlA;locus_tag=YPO3145
NC_003143.1	RefSeq	CDS	3505124	3506890	.	-	0	ID=cds2886;Name=YP_002348050.1;Parent=gene3032;Dbxref=InterPro:IPR001140,InterPro:IPR003439,InterPro:IPR003593,InterPro:IPR011527,UniProtKB%2FTrEMBL:Q7CK22,Genbank:YP_002348050.1,GeneID:1175960;gbkey=CDS;gene=mdlA;product=multidrug transporter membrane%5CATP-binding components;protein_id=YP_002348050.1;transl_table=11
NC_003143.1	RefSeq	region	3505430	3505474	.	-	.	ID=id2275;Note=PS00211 ABC transporters family signature.;Dbxref=GeneID:1175960;gbkey=misc_feature;gene=mdlA
NC_003143.1	RefSeq	region	3505763	3505786	.	-	.	ID=id2276;Note=PS00017 ATP%2FGTP-binding site motif A %28P-loop%29.;Dbxref=GeneID:1175960;gbkey=misc_feature;gene=mdlA
NC_003143.1	RefSeq	gene	3506992	3507453	.	-	.	ID=gene3033;Name=YPO3146;Dbxref=GeneID:1175961;gbkey=Gene;locus_tag=YPO3146
NC_003143.1	RefSeq	CDS	3506992	3507453	.	-	0	ID=cds2887;Name=YP_002348051.1;Parent=gene3033;Dbxref=InterPro:IPR000485,InterPro:IPR011008,InterPro:IPR011991,UniProtKB%2FTrEMBL:Q7CK23,Genbank:YP_002348051.1,GeneID:1175961;gbkey=CDS;product=AsnC family transcriptional regulator;protein_id=YP_002348051.1;transl_table=11
NC_003143.1	RefSeq	gene	3507579	3508619	.	+	.	ID=gene3034;Name=YPO3147;Dbxref=GeneID:1175962;gbkey=Gene;locus_tag=YPO3147
NC_003143.1	RefSeq	CDS	3507579	3508619	.	+	0	ID=cds2888;Name=YP_002348052.1;Parent=gene3034;Dbxref=InterPro:IPR001926,UniProtKB%2FTrEMBL:Q7CK24,Genbank:YP_002348052.1,GeneID:1175962;gbkey=CDS;product=pyridoxal-phosphate dependent protein;protein_id=YP_002348052.1;transl_table=11
NC_003143.1	RefSeq	gene	3508831	3509652	.	-	.	ID=gene3035;Name=YPO3148;Dbxref=GeneID:1175963;gbkey=Gene;locus_tag=YPO3148
NC_003143.1	RefSeq	CDS	3508831	3509652	.	-	0	ID=cds2889;Name=YP_002348053.1;Parent=gene3035;Dbxref=InterPro:IPR000150,InterPro:IPR006379,InterPro:IPR013200,UniProtKB%2FTrEMBL:Q7CK25,Genbank:YP_002348053.1,GeneID:1175963;gbkey=CDS;product=haloacid dehalogenase;protein_id=YP_002348053.1;transl_table=11
NC_003143.1	RefSeq	region	3508957	3509025	.	-	.	ID=id2277;Note=PS01229 Hypothetical cof family signature 2.;Dbxref=GeneID:1175963;gbkey=misc_feature
NC_003143.1	RefSeq	region	3509608	3509643	.	-	.	ID=id2278;Note=PS01228 Hypothetical cof family signature 1.;Dbxref=GeneID:1175963;gbkey=misc_feature
NC_003143.1	RefSeq	gene	3509757	3511460	.	+	.	ID=gene3036;Name=YPO3149;Dbxref=GeneID:1175964;gbkey=Gene;locus_tag=YPO3149
NC_003143.1	RefSeq	CDS	3509757	3511460	.	+	0	ID=cds2890;Name=YP_002348054.1;Parent=gene3036;Dbxref=InterPro:IPR000914,InterPro:IPR006025,UniProtKB%2FTrEMBL:Q7CK26,Genbank:YP_002348054.1,GeneID:1175964;gbkey=CDS;product=hypothetical protein;protein_id=YP_002348054.1;transl_table=11
NC_003143.1	RefSeq	region	3510597	3510626	.	+	.	ID=id2279;Note=PS00142 Neutral zinc metallopeptidases%2C zinc-binding region signature.;Dbxref=GeneID:1175964;gbkey=misc_feature
NC_003143.1	RefSeq	gene	3511725	3512423	.	+	.	ID=gene3037;Name=YPO3150;Dbxref=GeneID:1175965;gbkey=Gene;locus_tag=YPO3150
NC_003143.1	RefSeq	CDS	3511725	3512423	.	+	0	ID=cds2891;Name=YP_002348055.1;Parent=gene3037;Note=YbaX%3B catalyzes the transformation of GTP to 7-cyano-7-deazaguanine %28preQ0%29%2C as one of the early reactions of quenosine biosynthesis%3B quenosine is a modified nucleoside that occurs at the wobble position of GUN anticodons in tRNAs for Asn%2C Asp%2C Tyr%2C and His;Dbxref=InterPro:IPR001518,InterPro:IPR004479,UniProtKB%2FTrEMBL:Q0WCD3,Genbank:YP_002348055.1,GeneID:1175965;gbkey=CDS;product=queuosine biosynthesis protein QueC;protein_id=YP_002348055.1;transl_table=11
NC_003143.1	RefSeq	region	3512325	3512342	.	+	.	ID=id2280;Note=PS00190 Cytochrome c family heme-binding site signature.;Dbxref=GeneID:1175965;gbkey=misc_feature
NC_003143.1	RefSeq	gene	3512509	3512916	.	-	.	ID=gene3038;Name=YPO3151;Dbxref=GeneID:1175966;gbkey=Gene;locus_tag=YPO3151
NC_003143.1	RefSeq	CDS	3512509	3512916	.	-	0	ID=cds2892;Name=YP_002348056.1;Parent=gene3038;Dbxref=InterPro:IPR006683,InterPro:IPR006684,UniProtKB%2FTrEMBL:Q0WCD2,Genbank:YP_002348056.1,GeneID:1175966;gbkey=CDS;product=hypothetical protein;protein_id=YP_002348056.1;transl_table=11
NC_003143.1	RefSeq	gene	3513270	3513716	.	-	.	ID=gene3039;Name=ybaV;Dbxref=GeneID:1175967;gbkey=Gene;gene=ybaV;locus_tag=YPO3152
NC_003143.1	RefSeq	CDS	3513270	3513716	.	-	0	ID=cds2893;Name=YP_002348057.1;Parent=gene3039;Dbxref=InterPro:IPR004509,InterPro:IPR010994,UniProtKB%2FTrEMBL:Q7CK28,Genbank:YP_002348057.1,GeneID:1175967;gbkey=CDS;gene=ybaV;product=hypothetical protein;protein_id=YP_002348057.1;transl_table=11
NC_003143.1	RefSeq	gene	3513856	3515742	.	-	.	ID=gene3040;Name=ppiD;Dbxref=GeneID:1175968;gbkey=Gene;gene=ppiD;locus_tag=YPO3153
NC_003143.1	RefSeq	CDS	3513856	3515742	.	-	0	ID=cds2894;Name=YP_002348058.1;Parent=gene3040;Dbxref=InterPro:IPR000297,UniProtKB%2FTrEMBL:Q7CK29,Genbank:YP_002348058.1,GeneID:1175968;gbkey=CDS;gene=ppiD;product=peptidyl-prolyl cis-trans isomerase D;protein_id=YP_002348058.1;transl_table=11
NC_003143.1	RefSeq	region	3515638	3515703	.	-	.	ID=id2281;Note=1 probable transmembrane helix predicted;Dbxref=GeneID:1175968;gbkey=misc_feature;gene=ppiD
NC_003143.1	RefSeq	gene	3516043	3516315	.	-	.	ID=gene3041;Name=hupB;Dbxref=GeneID:1175969;gbkey=Gene;gene=hupB;locus_tag=YPO3154
NC_003143.1	RefSeq	CDS	3516043	3516315	.	-	0	ID=cds2895;Name=YP_002348059.1;Parent=gene3041;Note=histone-like DNA-binding protein;Dbxref=InterPro:IPR000119,InterPro:IPR010992,UniProtKB%2FTrEMBL:Q7CK30,Genbank:YP_002348059.1,GeneID:1175969;gbkey=CDS;gene=hupB;product=transcriptional regulator HU subunit beta;protein_id=YP_002348059.1;transl_table=11
NC_003143.1	RefSeq	region	3516121	3516180	.	-	.	ID=id2282;Note=PS00045 Bacterial histone-like DNA-binding proteins signature.;Dbxref=GeneID:1175969;gbkey=misc_feature;gene=hupB
NC_003143.1	RefSeq	gene	3516533	3518887	.	-	.	ID=gene3042;Name=lon;Dbxref=GeneID:1175970;gbkey=Gene;gene=lon;gene_synonym=deg,lon,lopA,muc;locus_tag=YPO3155
NC_003143.1	RefSeq	CDS	3516533	3518887	.	-	0	ID=cds2896;Name=YP_002348060.1;Parent=gene3042;Dbxref=InterPro:IPR001984,InterPro:IPR003111,InterPro:IPR003593,InterPro:IPR003959,InterPro:IPR004815,InterPro:IPR008268,InterPro:IPR008269,UniProtKB%2FTrEMBL:Q0WCC8,Genbank:YP_002348060.1,GeneID:1175970;gbkey=CDS;gene=lon;product=DNA-binding ATP-dependent protease La;protein_id=YP_002348060.1;transl_table=11
NC_003143.1	RefSeq	region	3516836	3516862	.	-	.	ID=id2283;Note=PS01046 ATP-dependent serine proteases%2C lon family%2Cserine active site.;Dbxref=GeneID:1175970;gbkey=misc_feature;gene=lon
NC_003143.1	RefSeq	region	3517799	3517822	.	-	.	ID=id2284;Note=PS00017 ATP%2FGTP-binding site motif A %28P-loop%29.;Dbxref=GeneID:1175970;gbkey=misc_feature;gene=lon
NC_003143.1	RefSeq	gene	3519082	3520353	.	-	.	ID=gene3043;Name=clpX;Dbxref=GeneID:1175971;gbkey=Gene;gene=clpX;gene_synonym=lopC;locus_tag=YPO3156
NC_003143.1	RefSeq	CDS	3519082	3520353	.	-	0	ID=cds2897;Name=YP_002348061.1;Parent=gene3043;Note=binds and unfolds substrates as part of the ClpXP protease;Dbxref=InterPro:IPR000641,InterPro:IPR003593,InterPro:IPR004487,InterPro:IPR010603,InterPro:IPR013093,UniProtKB%2FTrEMBL:Q0WCC7,Genbank:YP_002348061.1,GeneID:1175971;gbkey=CDS;gene=clpX;product=ATP-dependent protease ATP-binding subunit ClpX;protein_id=YP_002348061.1;transl_table=11
NC_003143.1	RefSeq	region	3519976	3519999	.	-	.	ID=id2285;Note=PS00017 ATP%2FGTP-binding site motif A %28P-loop%29.;Dbxref=GeneID:1175971;gbkey=misc_feature;gene=clpX
NC_003143.1	RefSeq	gene	3520559	3521182	.	-	.	ID=gene3044;Name=clpP;Dbxref=GeneID:1175972;gbkey=Gene;gene=clpP;gene_synonym=lopP;locus_tag=YPO3157
NC_003143.1	RefSeq	CDS	3520559	3521182	.	-	0	ID=cds2898;Name=YP_002348062.1;Parent=gene3044;Note=hydrolyzes proteins to small peptides%3B with the ATPase subunits ClpA or ClpX%2C ClpP degrades specific substrates;Dbxref=InterPro:IPR001907,UniProtKB%2FTrEMBL:Q0WCC6,Genbank:YP_002348062.1,GeneID:1175972;gbkey=CDS;gene=clpP;product=ATP-dependent Clp protease proteolytic subunit;protein_id=YP_002348062.1;transl_table=11
NC_003143.1	RefSeq	region	3520769	3520810	.	-	.	ID=id2286;Note=PS00382 Endopeptidase Clp histidine active site.;Dbxref=GeneID:1175972;gbkey=misc_feature;gene=clpP
NC_003143.1	RefSeq	region	3520841	3520876	.	-	.	ID=id2287;Note=PS00381 Endopeptidase Clp serine active site.;Dbxref=GeneID:1175972;gbkey=misc_feature;gene=clpP
NC_003143.1	RefSeq	gene	3521644	3522948	.	-	.	ID=gene3045;Name=tig;Dbxref=GeneID:1175973;gbkey=Gene;gene=tig;locus_tag=YPO3158
NC_003143.1	RefSeq	CDS	3521644	3522948	.	-	0	ID=cds2899;Name=YP_002348063.1;Parent=gene3045;Note=Tig%3B RopA%3B peptidyl-prolyl cis%2Ftrans isomerase%3B promotes folding of newly synthesized proteins%3B binds ribosomal 50S subunit%3B forms a homodimer;Dbxref=InterPro:IPR001179,InterPro:IPR005215,InterPro:IPR008880,InterPro:IPR008881,UniProtKB%2FTrEMBL:Q0WCC5,Genbank:YP_002348063.1,GeneID:1175973;gbkey=CDS;gene=tig;product=trigger factor;protein_id=YP_002348063.1;transl_table=11
NC_003143.1	RefSeq	region	3522259	3522282	.	-	.	ID=id2288;Note=PS00017 ATP%2FGTP-binding site motif A %28P-loop%29.;Dbxref=GeneID:1175973;gbkey=misc_feature;gene=tig
NC_003143.1	RefSeq	gene	3523365	3523685	.	-	.	ID=gene3046;Name=bolA;Dbxref=GeneID:1175975;gbkey=Gene;gene=bolA;locus_tag=YPO3160
NC_003143.1	RefSeq	CDS	3523365	3523685	.	-	0	ID=cds2900;Name=YP_002348065.1;Parent=gene3046;Note=positive transcriptional regulator of morphogenetic pathway%3B controlling several genes involved in oxidative stress%2C acid stress%2C heat shock%2C osmotic shock%2C and carbon-starvation stress;Dbxref=InterPro:IPR002634,UniProtKB%2FTrEMBL:Q7CK31,Genbank:YP_002348065.1,GeneID:1175975;gbkey=CDS;gene=bolA;product=transcriptional regulator BolA;protein_id=YP_002348065.1;transl_table=11
NC_003143.1	RefSeq	gene	3524034	3524612	.	+	.	ID=gene3047;Name=yajG;Dbxref=GeneID:1175976;gbkey=Gene;gene=yajG;locus_tag=YPO3161
NC_003143.1	RefSeq	CDS	3524034	3524612	.	+	0	ID=cds2901;Name=YP_002348066.1;Parent=gene3047;Dbxref=InterPro:IPR005619,UniProtKB%2FTrEMBL:Q7CK32,Genbank:YP_002348066.1,GeneID:1175976;gbkey=CDS;gene=yajG;product=hypothetical protein;protein_id=YP_002348066.1;transl_table=11
NC_003143.1	RefSeq	gene	3524730	3526208	.	+	.	ID=gene3048;Name=ampG;Dbxref=GeneID:1175977;gbkey=Gene;gene=ampG;locus_tag=YPO3162
NC_003143.1	RefSeq	CDS	3524730	3526208	.	+	0	ID=cds2902;Name=YP_002348067.1;Parent=gene3048;Note=in Escherichia coli this protein is a permease involved in peptidoglycan recycling%3B member of major facilitator superfamily%3B MFS%3B inner membrane protein;Dbxref=InterPro:IPR004752,InterPro:IPR007114,InterPro:IPR011701,UniProtKB%2FTrEMBL:Q0WCC1,Genbank:YP_002348067.1,GeneID:1175977;gbkey=CDS;gene=ampG;product=muropeptide transporter;protein_id=YP_002348067.1;transl_table=11
NC_003143.1	RefSeq	gene	3526500	3527267	.	+	.	ID=gene3049;Name=yfeN;Dbxref=GeneID:1175978;gbkey=Gene;gene=yfeN;locus_tag=YPO3163
NC_003143.1	RefSeq	CDS	3526500	3527267	.	+	0	ID=cds2903;Name=YP_002348068.1;Parent=gene3049;Dbxref=InterPro:IPR010786,UniProtKB%2FTrEMBL:Q0WCC0,Genbank:YP_002348068.1,GeneID:1175978;gbkey=CDS;gene=yfeN;product=hypothetical protein;protein_id=YP_002348068.1;transl_table=11
NC_003143.1	RefSeq	gene	3527637	3528593	.	+	.	ID=gene3050;Name=cyoA;Dbxref=GeneID:1175979;gbkey=Gene;gene=cyoA;locus_tag=YPO3164
NC_003143.1	RefSeq	CDS	3527637	3528593	.	+	0	ID=cds2904;Name=YP_002348069.1;Parent=gene3050;Dbxref=InterPro:IPR002429,InterPro:IPR006333,InterPro:IPR008972,InterPro:IPR010514,InterPro:IPR011759,InterPro:IPR012141,UniProtKB%2FTrEMBL:Q7CK33,Genbank:YP_002348069.1,GeneID:1175979;gbkey=CDS;gene=cyoA;product=cytochrome o ubiquinol oxidase subunit II;protein_id=YP_002348069.1;transl_table=11
NC_003143.1	RefSeq	region	3527679	3527711	.	+	.	ID=id2289;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site.;Dbxref=GeneID:1175979;gbkey=misc_feature;gene=cyoA
NC_003143.1	RefSeq	gene	3528598	3530589	.	+	.	ID=gene3051;Name=cyoB;Dbxref=GeneID:1175980;gbkey=Gene;gene=cyoB;locus_tag=YPO3165
NC_003143.1	RefSeq	CDS	3528598	3530589	.	+	0	ID=cds2905;Name=YP_002348070.1;Parent=gene3051;Dbxref=InterPro:IPR000883,UniProtKB%2FTrEMBL:Q7CK34,Genbank:YP_002348070.1,GeneID:1175980;gbkey=CDS;gene=cyoB;product=cytochrome O ubiquinol oxidase subunit I;protein_id=YP_002348070.1;transl_table=11
NC_003143.1	RefSeq	region	3529435	3529599	.	+	.	ID=id2290;Note=PS00077 Heme-copper oxidase catalytic subunit%2Ccopper B binding region signature.;Dbxref=GeneID:1175980;gbkey=misc_feature;gene=cyoB
NC_003143.1	RefSeq	gene	3530579	3531193	.	+	.	ID=gene3052;Name=cyoC;Dbxref=GeneID:1175981;gbkey=Gene;gene=cyoC;locus_tag=YPO3166
NC_003143.1	RefSeq	CDS	3530579	3531193	.	+	0	ID=cds2906;Name=YP_002348071.1;Parent=gene3052;Dbxref=InterPro:IPR000298,InterPro:IPR013833,UniProtKB%2FTrEMBL:Q7CK35,Genbank:YP_002348071.1,GeneID:1175981;gbkey=CDS;gene=cyoC;product=cytochrome o ubiquinol oxidase subunit III;protein_id=YP_002348071.1;transl_table=11
NC_003143.1	RefSeq	gene	3531193	3531525	.	+	.	ID=gene3053;Name=cyoD;Dbxref=GeneID:1175982;gbkey=Gene;gene=cyoD;locus_tag=YPO3167
NC_003143.1	RefSeq	CDS	3531193	3531525	.	+	0	ID=cds2907;Name=YP_002348072.1;Parent=gene3053;Dbxref=InterPro:IPR005171,UniProtKB%2FTrEMBL:Q74WS8,Genbank:YP_002348072.1,GeneID:1175982;gbkey=CDS;gene=cyoD;product=cytochrome o ubiquinol oxidase subunit IV;protein_id=YP_002348072.1;transl_table=11
NC_003143.1	RefSeq	gene	3531536	3532426	.	+	.	ID=gene3054;Name=cyoE;Dbxref=GeneID:1175983;gbkey=Gene;gene=cyoE;locus_tag=YPO3168
NC_003143.1	RefSeq	CDS	3531536	3532426	.	+	0	ID=cds2908;Name=YP_002348073.1;Parent=gene3054;Note=converts protoheme IX and farnesyl diphosphate to heme O;Dbxref=InterPro:IPR000537,InterPro:IPR006369,UniProtKB%2FTrEMBL:Q0WCB5,Genbank:YP_002348073.1,GeneID:1175983;gbkey=CDS;gene=cyoE;product=protoheme IX farnesyltransferase;protein_id=YP_002348073.1;transl_table=11
NC_003143.1	RefSeq	region	3531665	3531697	.	+	.	ID=id2291;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site.;Dbxref=GeneID:1175983;gbkey=misc_feature;gene=cyoE
NC_003143.1	RefSeq	region	3531704	3531772	.	+	.	ID=id2292;Note=PS00943 UbiA prenyltransferase family signature.;Dbxref=GeneID:1175983;gbkey=misc_feature;gene=cyoE
NC_003143.1	RefSeq	gene	3532904	3534274	.	+	.	ID=gene3055;Name=yajR;Dbxref=GeneID:1175984;gbkey=Gene;gene=yajR;locus_tag=YPO3169
NC_003143.1	RefSeq	CDS	3532904	3534274	.	+	0	ID=cds2909;Name=YP_002348074.1;Parent=gene3055;Dbxref=InterPro:IPR007114,InterPro:IPR011701,UniProtKB%2FTrEMBL:Q7CK36,Genbank:YP_002348074.1,GeneID:1175984;gbkey=CDS;gene=yajR;product=transporter;protein_id=YP_002348074.1;transl_table=11
NC_003143.1	RefSeq	gene	3534398	3534889	.	-	.	ID=gene3056;Name=YPO3170;Dbxref=GeneID:1175985;gbkey=Gene;locus_tag=YPO3170
NC_003143.1	RefSeq	CDS	3534398	3534889	.	-	0	ID=cds2910;Name=YP_002348075.1;Parent=gene3056;Note=nucleotide binding property based on structural studies of Haemophilus influenzae crystallized protein in PDB Accession Number 1IN0 and NMR studies of Escherichia coli YajQ%3B the YajQ protein from Pseudomonas synringae appears to play a role in activation of bateriophage phi6 segment L transcription;Dbxref=InterPro:IPR007551,UniProtKB%2FTrEMBL:Q0WCB3,Genbank:YP_002348075.1,GeneID:1175985;gbkey=CDS;product=nucleotide-binding protein;protein_id=YP_002348075.1;transl_table=11
NC_003143.1	RefSeq	gene	3535121	3536032	.	+	.	ID=gene3057;Name=apbA;Dbxref=GeneID:1175986;gbkey=Gene;gene=apbA;gene_synonym=panE;locus_tag=YPO3171
NC_003143.1	RefSeq	CDS	3535121	3536032	.	+	0	ID=cds2911;Name=YP_002348076.1;Parent=gene3057;Note=ketopantoate reductase%3B catalyzes the NADPH reduction of ketopantoate to pantoate%3B functions in pantothenate %28vitamin B5%29 biosynthesis;Dbxref=InterPro:IPR003710,InterPro:IPR008927,InterPro:IPR013332,InterPro:IPR013752,UniProtKB%2FTrEMBL:Q0WCB2,Genbank:YP_002348076.1,GeneID:1175986;gbkey=CDS;gene=apbA;product=2-dehydropantoate 2-reductase;protein_id=YP_002348076.1;transl_table=11
NC_003143.1	RefSeq	gene	3535995	3536585	.	+	.	ID=gene3058;Name=thiJ;Dbxref=GeneID:1175987;gbkey=Gene;gene=thiJ;locus_tag=YPO3172
NC_003143.1	RefSeq	CDS	3535995	3536585	.	+	0	ID=cds2912;Name=YP_002348077.1;Parent=gene3058;Dbxref=InterPro:IPR002818,InterPro:IPR006287,UniProtKB%2FTrEMBL:Q0WCB1,Genbank:YP_002348077.1,GeneID:1175987;gbkey=CDS;gene=thiJ;product=DJ-1 family protein;protein_id=YP_002348077.1;transl_table=11
NC_003143.1	RefSeq	gene	3536653	3538104	.	-	.	ID=gene3059;Name=thiI;Dbxref=GeneID:1175988;gbkey=Gene;gene=thiI;locus_tag=YPO3173
NC_003143.1	RefSeq	CDS	3536653	3538104	.	-	0	ID=cds2913;Name=YP_002348078.1;Parent=gene3059;Note=Required for the synthesis of the thiazole moiety;Dbxref=InterPro:IPR001763,InterPro:IPR003720,InterPro:IPR004114,InterPro:IPR008994,UniProtKB%2FTrEMBL:Q0WCB0,Genbank:YP_002348078.1,GeneID:1175988;gbkey=CDS;gene=thiI;product=thiamine biosynthesis protein ThiI;protein_id=YP_002348078.1;transl_table=11
NC_003143.1	RefSeq	gene	3538454	3538708	.	+	.	ID=gene3060;Name=xseB;Dbxref=GeneID:1175990;gbkey=Gene;gene=xseB;locus_tag=YPO3175
NC_003143.1	RefSeq	CDS	3538454	3538708	.	+	0	ID=cds2914;Name=YP_002348080.1;Parent=gene3060;Note=catalyzes the bidirectional exonucleolytic cleavage of DNA;Dbxref=InterPro:IPR003761,UniProtKB%2FTrEMBL:Q0WCA8,Genbank:YP_002348080.1,GeneID:1175990;gbkey=CDS;gene=xseB;product=exodeoxyribonuclease VII small subunit;protein_id=YP_002348080.1;transl_table=11
NC_003143.1	RefSeq	gene	3538713	3539633	.	+	.	ID=gene3061;Name=ispA;Dbxref=GeneID:1175991;gbkey=Gene;gene=ispA;locus_tag=YPO3176
NC_003143.1	RefSeq	CDS	3538713	3539633	.	+	0	ID=cds2915;Name=YP_002348081.1;Parent=gene3061;Dbxref=InterPro:IPR000092,InterPro:IPR008949,UniProtKB%2FTrEMBL:Q7CK38,Genbank:YP_002348081.1,GeneID:1175991;gbkey=CDS;gene=ispA;product=geranyltranstransferase;protein_id=YP_002348081.1;transl_table=11
NC_003143.1	RefSeq	region	3538974	3539024	.	+	.	ID=id2293;Note=PS00723 Polyprenyl synthetases signature 1.;Dbxref=GeneID:1175991;gbkey=misc_feature;gene=ispA
NC_003143.1	RefSeq	region	3539376	3539414	.	+	.	ID=id2294;Note=PS00444 Polyprenyl synthetases signature 2.;Dbxref=GeneID:1175991;gbkey=misc_feature;gene=ispA
NC_003143.1	RefSeq	gene	3539789	3541648	.	+	.	ID=gene3062;Name=dxs;Dbxref=GeneID:1175992;gbkey=Gene;gene=dxs;locus_tag=YPO3177
NC_003143.1	RefSeq	CDS	3539789	3541648	.	+	0	ID=cds2916;Name=YP_002348082.1;Parent=gene3062;Note=catalyzes the formation of 1-deoxy-D-xylulose 5-phosphate from pyruvate and D-glyceraldehyde 3-phosphate;Dbxref=InterPro:IPR005474,InterPro:IPR005475,InterPro:IPR005476,InterPro:IPR005477,InterPro:IPR009014,UniProtKB%2FTrEMBL:Q0WCA6,Genbank:YP_002348082.1,GeneID:1175992;gbkey=CDS;gene=dxs;product=1-deoxy-D-xylulose-5-phosphate synthase;protein_id=YP_002348082.1;transl_table=11
NC_003143.1	RefSeq	region	3539894	3539953	.	+	.	ID=id2295;Note=PS00801 Transketolase signature 1.;Dbxref=GeneID:1175992;gbkey=misc_feature;gene=dxs
NC_003143.1	RefSeq	region	3541061	3541111	.	+	.	ID=id2296;Note=PS00802 Transketolase signature 2.;Dbxref=GeneID:1175992;gbkey=misc_feature;gene=dxs
NC_003143.1	RefSeq	repeat_region	3541719	3542430	.	-	.	ID=id2297;Note=Contains a %27A%27 at nucleotide position 315%7EIS200-like insertion sequence:IS1541;gbkey=repeat_region
NC_003143.1	RefSeq	gene	3541827	3542285	.	-	.	ID=gene3063;Name=tnp;Dbxref=GeneID:1175993;gbkey=Gene;gene=tnp;locus_tag=YPO3178
NC_003143.1	RefSeq	CDS	3541827	3542285	.	-	0	ID=cds2917;Name=YP_002348083.1;Parent=gene3063;Dbxref=InterPro:IPR002686,UniProtKB%2FTrEMBL:Q56938,Genbank:YP_002348083.1,GeneID:1175993;gbkey=CDS;gene=tnp;product=transposase for the IS1541 insertion element;protein_id=YP_002348083.1;transl_table=11
NC_003143.1	RefSeq	gene	3542499	3542984	.	-	.	ID=gene3064;Name=pgpA;Dbxref=GeneID:1175994;gbkey=Gene;gene=pgpA;locus_tag=YPO3179
NC_003143.1	RefSeq	CDS	3542499	3542984	.	-	0	ID=cds2918;Name=YP_002348084.1;Parent=gene3064;Note=hydrolyzes phosphatidylglycerophosphate to produce phosphatidylglycerol and phosphate;Dbxref=InterPro:IPR007686,UniProtKB%2FTrEMBL:Q74WT5,Genbank:YP_002348084.1,GeneID:1175994;gbkey=CDS;gene=pgpA;product=phosphatidylglycerophosphatase A;protein_id=YP_002348084.1;transl_table=11
NC_003143.1	RefSeq	gene	3542977	3543966	.	-	.	ID=gene3065;Name=thiL;Dbxref=GeneID:1175995;gbkey=Gene;gene=thiL;locus_tag=YPO3180
NC_003143.1	RefSeq	CDS	3542977	3543966	.	-	0	ID=cds2919;Name=YP_002348085.1;Parent=gene3065;Note=catalyzes the formation of thiamine diphosphate from thiamine phosphate ant ATP;Dbxref=InterPro:IPR006283,InterPro:IPR010918,UniProtKB%2FTrEMBL:Q7CK42,Genbank:YP_002348085.1,GeneID:1175995;gbkey=CDS;gene=thiL;product=thiamine monophosphate kinase;protein_id=YP_002348085.1;transl_table=11
NC_003143.1	RefSeq	gene	3544207	3544623	.	-	.	ID=gene3066;Name=nusB;Dbxref=GeneID:1175996;gbkey=Gene;gene=nusB;gene_synonym=ssyB;locus_tag=YPO3181
NC_003143.1	RefSeq	CDS	3544207	3544623	.	-	0	ID=cds2920;Name=YP_002348086.1;Parent=gene3066;Note=Regulates rRNA biosynthesis by transcriptional antitermination;Dbxref=InterPro:IPR006027,InterPro:IPR011605,UniProtKB%2FTrEMBL:Q0WCA2,Genbank:YP_002348086.1,GeneID:1175996;gbkey=CDS;gene=nusB;product=transcription antitermination protein NusB;protein_id=YP_002348086.1;transl_table=11
NC_003143.1	RefSeq	gene	3544644	3545114	.	-	.	ID=gene3067;Name=ribH;Dbxref=GeneID:1175997;gbkey=Gene;gene=ribH;locus_tag=YPO3182
NC_003143.1	RefSeq	CDS	3544644	3545114	.	-	0	ID=cds2921;Name=YP_002348087.1;Parent=gene3067;Note=RibE%3B 6%2C7-diimethyl-8-ribityllumazine synthase%3B DMRL synthase%3B lumazine synthase%3B beta subunit of riboflavin synthase%3B condenses 5-amino-6-%281%27-D%29-ribityl-amino-2%2C4%281H%2C3H%29-pyrimidinedione with L-3%2C4-dihydrohy-2-butanone-4-phosphate to generate 6%2C6-dimethyl-8-lumazine %28DMRL%29%3B riboflavin synthase then uses 2 molecules of DMRL to produce riboflavin %28vitamin B12%29%3B involved in the last steps of riboflavin biosynthesis%3B forms a 60mer %28icosahedral shell%29 in both Bacillus subtilis and Escherichia coli%3B in Bacillus subtilis this 60mer is associated with the riboflavin synthase subunit %28alpha%29 while in Escherichia coli it is not;Dbxref=InterPro:IPR002180,UniProtKB%2FTrEMBL:Q0WCA1,Genbank:YP_002348087.1,GeneID:1175997;gbkey=CDS;gene=ribH;product=6%2C7-dimethyl-8-ribityllumazine synthase;protein_id=YP_002348087.1;transl_table=11
NC_003143.1	RefSeq	gene	3545250	3546359	.	-	.	ID=gene3068;Name=ribD;Dbxref=GeneID:1175998;gbkey=Gene;gene=ribD;gene_synonym=ribG;locus_tag=YPO3183
NC_003143.1	RefSeq	CDS	3545250	3546359	.	-	0	ID=cds2922;Name=YP_002348088.1;Parent=gene3068;Note=riboflavin biosynthesis protein which catalyzes the deamination and reduction steps in the riboflavin biosynthesis pathway%3B catalyzes the formation of 5-amino-6-%285-phosphoribosylamino%29uracil from 2%2C5-diamino-6-hydroxy-4-%285-phosphoribosylamino%29pyrimidine and the formation of 5-amino-6-%285-phosphoribosylamino%29uracil from 5-amino-6-%285-phosphoribitylamino%29uracil;Dbxref=InterPro:IPR002125,InterPro:IPR002734,InterPro:IPR004794,InterPro:IPR011549,UniProtKB%2FTrEMBL:Q7CK43,Genbank:YP_002348088.1,GeneID:1175998;gbkey=CDS;gene=ribD;product=bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase%2F5-amino-6-%285-phosphoribosylamino%29uracil reductase;protein_id=YP_002348088.1;transl_table=11
NC_003143.1	RefSeq	region	3546093	3546209	.	-	.	ID=id2298;Note=PS00903 Cytidine and deoxycytidylate deaminases zinc-binding region signature.;Dbxref=GeneID:1175998;gbkey=misc_feature;gene=ribD
NC_003143.1	RefSeq	gene	3546509	3546958	.	-	.	ID=gene3069;Name=nrdR;Dbxref=GeneID:1175999;gbkey=Gene;gene=nrdR;locus_tag=YPO3184
NC_003143.1	RefSeq	CDS	3546509	3546958	.	-	0	ID=cds2923;Name=YP_002348089.1;Parent=gene3069;Dbxref=InterPro:IPR003796,InterPro:IPR005144,UniProtKB%2FTrEMBL:Q0WC99,Genbank:YP_002348089.1,GeneID:1175999;gbkey=CDS;gene=nrdR;product=transcriptional regulator NrdR;protein_id=YP_002348089.1;transl_table=11
NC_003143.1	RefSeq	gene	3547029	3548350	.	-	.	ID=gene3070;Name=YPO3185;Dbxref=GeneID:1176000;gbkey=Gene;locus_tag=YPO3185;pseudo=true
NC_003143.1	RefSeq	repeat_region	3548540	3549251	.	-	.	ID=id2299;Note=Contains a %27A%27 at nucleotide position 315%7EIS200-like insertion sequence:IS1541;gbkey=repeat_region
NC_003143.1	RefSeq	gene	3548648	3549106	.	-	.	ID=gene3071;Name=tnp;Dbxref=GeneID:1176002;gbkey=Gene;gene=tnp;locus_tag=YPO3187
NC_003143.1	RefSeq	CDS	3548648	3549106	.	-	0	ID=cds2924;Name=YP_002348092.1;Parent=gene3071;Dbxref=InterPro:IPR002686,UniProtKB%2FTrEMBL:Q56938,Genbank:YP_002348092.1,GeneID:1176002;gbkey=CDS;gene=tnp;product=transposase for the IS1541 insertion element;protein_id=YP_002348092.1;transl_table=11
NC_003143.1	RefSeq	gene	3549313	3550281	.	-	.	ID=gene3072;Name=secF;Dbxref=GeneID:1176003;gbkey=Gene;gene=secF;locus_tag=YPO3188
NC_003143.1	RefSeq	CDS	3549313	3550281	.	-	0	ID=cds2925;Name=YP_002348093.1;Parent=gene3072;Note=forms a complex with SecD and YajC%3B SecDFyajC stimulates the proton motive force-driven protein translocation%3B seems to modulate the cycling of SecA by stabilizing its membrane-inserted state and appears to be required for the release of mature proteins from the extracytoplasmic side of the membrane%3B in some organisms%2C such as Bacillus subtilis%2C SecD is fused to SecF;Dbxref=InterPro:IPR003335,InterPro:IPR005665,UniProtKB%2FTrEMBL:Q0WC95,Genbank:YP_002348093.1,GeneID:1176003;gbkey=CDS;gene=secF;product=preprotein translocase subunit SecF;protein_id=YP_002348093.1;transl_table=11
NC_003143.1	RefSeq	gene	3550292	3552139	.	-	.	ID=gene3073;Name=secD;Dbxref=GeneID:1176004;gbkey=Gene;gene=secD;locus_tag=YPO3189
NC_003143.1	RefSeq	CDS	3550292	3552139	.	-	0	ID=cds2926;Name=YP_002348094.1;Parent=gene3073;Note=part of the preprotein secretory system%3B when complexed with proteins SecF and YajC%2C SecDFyajC stimulates the proton motive force-driven protein translocation%2C and appears to be required for the release of mature proteins from the extracytoplasmic side of the membrane;Dbxref=InterPro:IPR003335,InterPro:IPR005791,UniProtKB%2FTrEMBL:Q74WU2,Genbank:YP_002348094.1,GeneID:1176004;gbkey=CDS;gene=secD;product=preprotein translocase subunit SecD;protein_id=YP_002348094.1;transl_table=11
NC_003143.1	RefSeq	region	3551144	3551185	.	-	.	ID=id2300;Note=PS00761 Signal peptidases I signature 3.;Dbxref=GeneID:1176004;gbkey=misc_feature;gene=secD
NC_003143.1	RefSeq	gene	3552167	3552532	.	-	.	ID=gene3074;Name=yajC;Dbxref=GeneID:1176005;gbkey=Gene;gene=yajC;locus_tag=YPO3190
NC_003143.1	RefSeq	CDS	3552167	3552502	.	-	0	ID=cds2927;Name=YP_002348095.1;Parent=gene3074;Note=member of preprotein translocase%3B forms a heterotrimer with SecD and SecF%3B links the SecD%2FSecF%2FYajC%2FYidC complex with the SecY%2FSecE%2FSecG complex;Dbxref=InterPro:IPR003849,UniProtKB%2FTrEMBL:Q0WC93,Genbank:YP_002348095.1,GeneID:1176005;gbkey=CDS;gene=yajC;product=preprotein translocase subunit YajC;protein_id=YP_002348095.1;transl_table=11
NC_003143.1	RefSeq	gene	3552614	3553738	.	-	.	ID=gene3075;Name=tgt;Dbxref=GeneID:1176006;gbkey=Gene;gene=tgt;locus_tag=YPO3191
NC_003143.1	RefSeq	CDS	3552614	3553738	.	-	0	ID=cds2928;Name=YP_002348096.1;Parent=gene3075;Note=Exchanges the guanine residue with 7-aminomethyl-7-deazaguanine in tRNAs with GU%28N%29 anticodons %28tRNA-Asp%2C -Asn%2C -His and -Tyr%29;Dbxref=InterPro:IPR002616,InterPro:IPR004803,UniProtKB%2FTrEMBL:Q0WC92,Genbank:YP_002348096.1,GeneID:1176006;gbkey=CDS;gene=tgt;product=queuine tRNA-ribosyltransferase;protein_id=YP_002348096.1;transl_table=11
NC_003143.1	RefSeq	gene	3553831	3554901	.	-	.	ID=gene3076;Name=queA;Dbxref=GeneID:1176007;gbkey=Gene;gene=queA;locus_tag=YPO3192
NC_003143.1	RefSeq	CDS	3553831	3554901	.	-	0	ID=cds2929;Name=YP_002348097.1;Parent=gene3076;Note=Synthesizes oQ from preQ1 in a single S-adenosylmethionine-requiring step;Dbxref=InterPro:IPR003699,UniProtKB%2FTrEMBL:Q0WC91,Genbank:YP_002348097.1,GeneID:1176007;gbkey=CDS;gene=queA;product=S-adenosylmethionine:tRNA ribosyltransferase-isomerase;protein_id=YP_002348097.1;transl_table=11
NC_003143.1	RefSeq	gene	3555104	3555685	.	+	.	ID=gene3077;Name=YPO3193;Dbxref=GeneID:1176008;gbkey=Gene;locus_tag=YPO3193
NC_003143.1	RefSeq	CDS	3555104	3555685	.	+	0	ID=cds2930;Name=YP_002348098.1;Parent=gene3077;Dbxref=InterPro:IPR007431,UniProtKB%2FTrEMBL:Q0WC90,Genbank:YP_002348098.1,GeneID:1176008;gbkey=CDS;product=hypothetical protein;protein_id=YP_002348098.1;transl_table=11
NC_003143.1	RefSeq	gene	3555984	3556586	.	+	.	ID=gene3078;Name=ahpC;Dbxref=GeneID:1176009;gbkey=Gene;gene=ahpC;locus_tag=YPO3194
NC_003143.1	RefSeq	CDS	3555984	3556586	.	+	0	ID=cds2931;Name=YP_002348099.1;Parent=gene3078;Dbxref=InterPro:IPR000866,InterPro:IPR012335,InterPro:IPR012336,UniProtKB%2FTrEMBL:Q7CK47,Genbank:YP_002348099.1,GeneID:1176009;gbkey=CDS;gene=ahpC;product=alkyl hydroperoxide reductase;protein_id=YP_002348099.1;transl_table=11
NC_003143.1	RefSeq	repeat_region	3556656	3557367	.	+	.	ID=id2301;Note=Contains a %27G%27 at nucleotide position 315%7EIS200-like insertion sequence:IS1541;gbkey=repeat_region
NC_003143.1	RefSeq	gene	3556801	3557259	.	+	.	ID=gene3079;Name=tnp;Dbxref=GeneID:1176010;gbkey=Gene;gene=tnp;locus_tag=YPO3195
NC_003143.1	RefSeq	CDS	3556801	3557259	.	+	0	ID=cds2932;Name=YP_002348100.1;Parent=gene3079;Dbxref=InterPro:IPR002686,UniProtKB%2FTrEMBL:Q74YM6,Genbank:YP_002348100.1,GeneID:1176010;gbkey=CDS;gene=tnp;product=transposase for the IS1541 insertion element;protein_id=YP_002348100.1;transl_table=11
NC_003143.1	RefSeq	gene	3557387	3557518	.	-	.	ID=gene3080;Name=YPO3196;Dbxref=GeneID:1176011;gbkey=Gene;locus_tag=YPO3196
NC_003143.1	RefSeq	CDS	3557387	3557518	.	-	0	ID=cds2933;Name=YP_002348101.1;Parent=gene3080;Note=no significant database hits;Dbxref=UniProtKB%2FTrEMBL:Q74WU6,Genbank:YP_002348101.1,GeneID:1176011;gbkey=CDS;product=hypothetical protein;protein_id=YP_002348101.1;transl_table=11
NC_003143.1	RefSeq	gene	3557544	3557819	.	-	.	ID=gene3081;Name=YPO3197;Dbxref=GeneID:1176012;gbkey=Gene;locus_tag=YPO3197
NC_003143.1	RefSeq	CDS	3557544	3557819	.	-	0	ID=cds2934;Name=YP_002348102.1;Parent=gene3081;Note=no significant database hits;Dbxref=UniProtKB%2FTrEMBL:Q74WU7,Genbank:YP_002348102.1,GeneID:1176012;gbkey=CDS;product=hypothetical protein;protein_id=YP_002348102.1;transl_table=11
NC_003143.1	RefSeq	gene	3557687	3559452	.	+	.	ID=gene3082;Name=ggt;Dbxref=GeneID:1176013;gbkey=Gene;gene=ggt;locus_tag=YPO3198;pseudo=true
NC_003143.1	RefSeq	region	3558811	3558885	.	+	.	ID=id2302;Note=PS00462 Gamma-glutamyltranspeptidase signature.;Dbxref=GeneID:1176013;gbkey=misc_feature;gene=ggt
NC_003143.1	RefSeq	gene	3559660	3560340	.	-	.	ID=gene3083;Name=YPO3199;Dbxref=GeneID:1176014;gbkey=Gene;locus_tag=YPO3199
NC_003143.1	RefSeq	CDS	3559660	3560340	.	-	0	ID=cds2935;Name=YP_002348103.1;Parent=gene3083;Dbxref=InterPro:IPR001509,InterPro:IPR002347,UniProtKB%2FTrEMBL:Q7CK48,Genbank:YP_002348103.1,GeneID:1176014;gbkey=CDS;product=short chain dehydrogenase;protein_id=YP_002348103.1;transl_table=11
NC_003143.1	RefSeq	gene	3560495	3562324	.	-	.	ID=gene3084;Name=malZ;Dbxref=GeneID:1176015;gbkey=Gene;gene=malZ;locus_tag=YPO3200
NC_003143.1	RefSeq	CDS	3560495	3562324	.	-	0	ID=cds2936;Name=YP_002348104.1;Parent=gene3084;Dbxref=InterPro:IPR006047,InterPro:IPR006589,InterPro:IPR013781,UniProtKB%2FTrEMBL:Q7CK49,Genbank:YP_002348104.1,GeneID:1176015;gbkey=CDS;gene=malZ;product=maltodextrin glucosidase;protein_id=YP_002348104.1;transl_table=11
NC_003143.1	RefSeq	gene	3562885	3564276	.	-	.	ID=gene3085;Name=proY;Dbxref=GeneID:1176016;gbkey=Gene;gene=proY;locus_tag=YPO3201
NC_003143.1	RefSeq	CDS	3562885	3564276	.	-	0	ID=cds2937;Name=YP_002348105.1;Parent=gene3085;Note=cryptic permease that may be involved in the transport of proline across the inner membrane%3B in Salmonella typhimurium%2C the proY gene is silent unless overexpressed on a multicopy plasmid or activated by a proZ mutation;Dbxref=InterPro:IPR002293,InterPro:IPR004840,InterPro:IPR004841,UniProtKB%2FTrEMBL:Q0WC83,Genbank:YP_002348105.1,GeneID:1176016;gbkey=CDS;gene=proY;product=permease;protein_id=YP_002348105.1;transl_table=11
NC_003143.1	RefSeq	region	3564061	3564153	.	-	.	ID=id2303;Note=PS00218 Amino acid permeases signature.;Dbxref=GeneID:1176016;gbkey=misc_feature;gene=proY
NC_003143.1	RefSeq	gene	3564352	3565671	.	-	.	ID=gene3086;Name=brnQ;Dbxref=GeneID:1176017;gbkey=Gene;gene=brnQ;locus_tag=YPO3202
NC_003143.1	RefSeq	CDS	3564352	3565671	.	-	0	ID=cds2938;Name=YP_002348106.1;Parent=gene3086;Dbxref=InterPro:IPR004685,UniProtKB%2FTrEMBL:Q7CK50,Genbank:YP_002348106.1,GeneID:1176017;gbkey=CDS;gene=brnQ;product=branched-chain amino acid transport system II carrier protein;protein_id=YP_002348106.1;transl_table=11
NC_003143.1	RefSeq	gene	3566145	3567209	.	-	.	ID=gene3087;Name=pstS;Dbxref=GeneID:1176018;gbkey=Gene;gene=pstS;locus_tag=YPO3203
NC_003143.1	RefSeq	CDS	3566145	3567209	.	-	0	ID=cds2939;Name=YP_002348107.1;Parent=gene3087;Dbxref=InterPro:IPR011862,UniProtKB%2FTrEMBL:Q7CK51,Genbank:YP_002348107.1,GeneID:1176018;gbkey=CDS;gene=pstS;product=phosphate binding protein;protein_id=YP_002348107.1;transl_table=11
NC_003143.1	RefSeq	gene	3567231	3568547	.	-	.	ID=gene3088;Name=phoR;Dbxref=GeneID:1176019;gbkey=Gene;gene=phoR;locus_tag=YPO3204
NC_003143.1	RefSeq	CDS	3567231	3568547	.	-	0	ID=cds2940;Name=YP_002348108.1;Parent=gene3088;Note=membrane-associated histidine protein kinase that phosphorylates phoB in response to environmental signals as part of the two-component phosphate regulatory system phoR%2FphoB;Dbxref=InterPro:IPR000014,InterPro:IPR003594,InterPro:IPR003661,InterPro:IPR004358,InterPro:IPR005467,InterPro:IPR009082,InterPro:IPR013767,UniProtKB%2FTrEMBL:Q7CK52,Genbank:YP_002348108.1,GeneID:1176019;gbkey=CDS;gene=phoR;product=phosphate regulon sensor protein;protein_id=YP_002348108.1;transl_table=11
NC_003143.1	RefSeq	gene	3568572	3569261	.	-	.	ID=gene3089;Name=phoB;Dbxref=GeneID:1176020;gbkey=Gene;gene=phoB;locus_tag=YPO3205
NC_003143.1	RefSeq	CDS	3568572	3569261	.	-	0	ID=cds2941;Name=YP_002348109.1;Parent=gene3089;Dbxref=InterPro:IPR001789,InterPro:IPR001867,InterPro:IPR011006,InterPro:IPR011879,UniProtKB%2FTrEMBL:Q0WC79,Genbank:YP_002348109.1,GeneID:1176020;gbkey=CDS;gene=phoB;product=phosphate regulon transcriptional regulator;protein_id=YP_002348109.1;transl_table=11
NC_003143.1	RefSeq	gene	3569529	3570773	.	+	.	ID=gene3090;Name=sbcD;Dbxref=GeneID:1176021;gbkey=Gene;gene=sbcD;locus_tag=YPO3206
NC_003143.1	RefSeq	CDS	3569529	3570773	.	+	0	ID=cds2942;Name=YP_002348110.1;Parent=gene3090;Note=with SbcC cleaves DNA hairpin structure%2C also has 5%27 single-strand endonuclease activity;Dbxref=InterPro:IPR004593,InterPro:IPR004843,UniProtKB%2FTrEMBL:Q7CK53,Genbank:YP_002348110.1,GeneID:1176021;gbkey=CDS;gene=sbcD;product=exonuclease SbcD;protein_id=YP_002348110.1;transl_table=11
NC_003143.1	RefSeq	gene	3570770	3574477	.	+	.	ID=gene3091;Name=sbcD;Dbxref=GeneID:1176022;gbkey=Gene;gene=sbcD;locus_tag=YPO3207
NC_003143.1	RefSeq	CDS	3570770	3574477	.	+	0	ID=cds2943;Name=YP_008479723.1;Parent=gene3091;Dbxref=Genbank:YP_008479723.1,GeneID:1176022;gbkey=CDS;product=hypothetical protein;protein_id=YP_008479723.1;transl_table=11
NC_003143.1	RefSeq	region	3570878	3570901	.	+	.	ID=id2304;Note=PS00017 ATP%2FGTP-binding site motif A %28P-loop%29.;Dbxref=GeneID:1176022;gbkey=misc_feature
NC_003143.1	RefSeq	repeat_region	3574421	3576374	.	-	.	ID=id2305;Note=insertion sequence:IS100;gbkey=repeat_region
NC_003143.1	RefSeq	repeat_region	3574421	3574448	.	+	.	ID=id2306;Note=IS100 inverted repeat;Dbxref=GeneID:1176022;gbkey=repeat_region
NC_003143.1	RefSeq	gene	3574487	3575269	.	-	.	ID=gene3092;Name=YPO3208;Note=ypmt1.57c;Dbxref=GeneID:1176023;gbkey=Gene;locus_tag=YPO3208
NC_003143.1	RefSeq	CDS	3574487	3575269	.	-	0	ID=cds2944;Name=YP_002348111.1;Parent=gene3092;Dbxref=InterPro:IPR001270,InterPro:IPR002611,InterPro:IPR003593,UniProtKB%2FTrEMBL:Q7ARK4,Genbank:YP_002348111.1,GeneID:1176023;gbkey=CDS;product=transposase%2FIS protein;protein_id=YP_002348111.1;transl_table=11
NC_003143.1	RefSeq	region	3574919	3574942	.	-	.	ID=id2307;Note=PS00017 ATP%2FGTP-binding site motif A %28P-loop%29.;Dbxref=GeneID:1176023;gbkey=misc_feature
NC_003143.1	RefSeq	gene	3575266	3576288	.	-	.	ID=gene3093;Name=y1093;Dbxref=GeneID:1176024;gbkey=Gene;gene=y1093;gene_synonym=ypmt1;locus_tag=YPO3209
NC_003143.1	RefSeq	CDS	3575266	3576288	.	-	0	ID=cds2945;Name=YP_002348112.1;Parent=gene3093;Dbxref=InterPro:IPR001584,InterPro:IPR006120,InterPro:IPR009057,InterPro:IPR012287,InterPro:IPR012337,UniProtKB%2FTrEMBL:Q7ARN5,Genbank:YP_002348112.1,GeneID:1176024;gbkey=CDS;gene=y1093;product=transposase for insertion sequence IS100;protein_id=YP_002348112.1;transl_table=11
NC_003143.1	RefSeq	region	3576172	3576237	.	-	.	ID=id2308;Note=Predicted helix-turn-helix motif with score 2147 %28%2B6.50 SD%29 at aa 18-39%2C sequence MSSRAIARELGISRNTVKRYLQ;Dbxref=GeneID:1176024;gbkey=misc_feature;gene=y1093
NC_003143.1	RefSeq	repeat_region	3576347	3576374	.	-	.	ID=id2309;Note=IS100 inverted repeat;gbkey=repeat_region
NC_003143.1	RefSeq	gene	3577020	3577934	.	-	.	ID=gene3094;Name=YPO3211;Dbxref=GeneID:1176025;gbkey=Gene;locus_tag=YPO3211
NC_003143.1	RefSeq	CDS	3577020	3577934	.	-	0	ID=cds2946;Name=YP_002348113.1;Parent=gene3094;Note=catalyzes phosphorylation of fructose%3B cytosolic enzyme;Dbxref=InterPro:IPR000600,UniProtKB%2FTrEMBL:Q7CK54,Genbank:YP_002348113.1,GeneID:1176025;gbkey=CDS;product=fructokinase;protein_id=YP_002348113.1;transl_table=11
NC_003143.1	RefSeq	region	3577464	3577547	.	-	.	ID=id2310;Note=PS01125 ROK family signature.;Dbxref=GeneID:1176025;gbkey=misc_feature
NC_003143.1	RefSeq	gene	3578267	3579178	.	+	.	ID=gene3095;Name=rdgC;Dbxref=GeneID:1176026;gbkey=Gene;gene=rdgC;locus_tag=YPO3212
NC_003143.1	RefSeq	CDS	3578267	3579178	.	+	0	ID=cds2947;Name=YP_002348114.1;Parent=gene3095;Note=Required for efficient pilin antigenic variation;Dbxref=InterPro:IPR007476,UniProtKB%2FTrEMBL:Q0WC74,Genbank:YP_002348114.1,GeneID:1176026;gbkey=CDS;gene=rdgC;product=recombination associated protein;protein_id=YP_002348114.1;transl_table=11
NC_003143.1	RefSeq	gene	3579414	3579701	.	-	.	ID=gene3096;Name=YPO3213;Dbxref=GeneID:1176027;gbkey=Gene;locus_tag=YPO3213
NC_003143.1	RefSeq	CDS	3579414	3579701	.	-	0	ID=cds2948;Name=YP_002348115.1;Parent=gene3096;Dbxref=InterPro:IPR009664,InterPro:IPR011051,UniProtKB%2FTrEMBL:Q0WC73,Genbank:YP_002348115.1,GeneID:1176027;gbkey=CDS;product=hypothetical protein;protein_id=YP_002348115.1;transl_table=11
NC_003143.1	RefSeq	region	3579858	3579923	.	-	.	ID=id2311;Note=1 probable transmembrane helix predicted;gbkey=misc_feature
NC_003143.1	RefSeq	gene	3580191	3580715	.	-	.	ID=gene3097;Name=aroL;Dbxref=GeneID:1176029;gbkey=Gene;gene=aroL;locus_tag=YPO3215
NC_003143.1	RefSeq	CDS	3580191	3580715	.	-	0	ID=cds2949;Name=YP_002348117.1;Parent=gene3097;Note=type II enzyme similar to type I but differentially regulated and with a lower Km%3B catalyzes the formation of shikimate 3-phosphate from shikimate in aromatic amino acid biosynthesis;Dbxref=InterPro:IPR000623,UniProtKB%2FTrEMBL:Q0WC71,Genbank:YP_002348117.1,GeneID:1176029;gbkey=CDS;gene=aroL;product=shikimate kinase II;protein_id=YP_002348117.1;transl_table=11
NC_003143.1	RefSeq	region	3580470	3580544	.	-	.	ID=id2312;Note=PS01128 Shikimate kinase signature.;Dbxref=GeneID:1176029;gbkey=misc_feature;gene=aroL
NC_003143.1	RefSeq	region	3580668	3580691	.	-	.	ID=id2313;Note=PS00017 ATP%2FGTP-binding site motif A %28P-loop%29.;Dbxref=GeneID:1176029;gbkey=misc_feature;gene=aroL
NC_003143.1	RefSeq	gene	3580962	3581519	.	-	.	ID=gene3098;Name=YPO3216;Dbxref=GeneID:1176030;gbkey=Gene;locus_tag=YPO3216
NC_003143.1	RefSeq	CDS	3580962	3581519	.	-	0	ID=cds2950;Name=YP_002348118.1;Parent=gene3098;Dbxref=InterPro:IPR013217,UniProtKB%2FTrEMBL:Q0WC70,Genbank:YP_002348118.1,GeneID:1176030;gbkey=CDS;product=methyltransferase;protein_id=YP_002348118.1;transl_table=11
NC_003143.1	RefSeq	gene	3582249	3582770	.	-	.	ID=gene3099;Name=YPO3218;Dbxref=GeneID:1176032;gbkey=Gene;locus_tag=YPO3218
NC_003143.1	RefSeq	CDS	3582249	3582770	.	-	0	ID=cds2951;Name=YP_002348120.1;Parent=gene3099;Dbxref=InterPro:IPR013216,UniProtKB%2FTrEMBL:Q7CK56,Genbank:YP_002348120.1,GeneID:1176032;gbkey=CDS;product=hypothetical protein;protein_id=YP_002348120.1;transl_table=11
NC_003143.1	RefSeq	STS	3582356	3582902	.	+	.	ID=id2314;Dbxref=UniSTS:515487;gbkey=STS
NC_003143.1	RefSeq	gene	3583016	3583285	.	-	.	ID=gene3100;Name=YPO3219;Dbxref=GeneID:1176033;gbkey=Gene;locus_tag=YPO3219
NC_003143.1	RefSeq	CDS	3583016	3583285	.	-	0	ID=cds2952;Name=YP_002348121.1;Parent=gene3100;Note=no significant database matches;Dbxref=UniProtKB%2FTrEMBL:Q7CK57,Genbank:YP_002348121.1,GeneID:1176033;gbkey=CDS;product=hypothetical protein;protein_id=YP_002348121.1;transl_table=11
NC_003143.1	RefSeq	gene	3583468	3584226	.	-	.	ID=gene3101;Name=YPO3220;Dbxref=GeneID:1176034;gbkey=Gene;locus_tag=YPO3220
NC_003143.1	RefSeq	CDS	3583468	3584226	.	-	0	ID=cds2953;Name=YP_002348122.1;Parent=gene3101;Dbxref=InterPro:IPR009875,InterPro:IPR009926,UniProtKB%2FTrEMBL:Q7CK58,Genbank:YP_002348122.1,GeneID:1176034;gbkey=CDS;product=hypothetical protein;protein_id=YP_002348122.1;transl_table=11
NC_003143.1	RefSeq	gene	3584554	3585813	.	-	.	ID=gene3102;Name=proA;Dbxref=GeneID:1176035;gbkey=Gene;gene=proA;locus_tag=YPO3221
NC_003143.1	RefSeq	CDS	3584554	3585813	.	-	0	ID=cds2954;Name=YP_002348123.1;Parent=gene3102;Note=Catalyzes the phosphorylation of L-glutamate during the proline biosynthesis pathway;Dbxref=InterPro:IPR000965,InterPro:IPR012134,UniProtKB%2FTrEMBL:Q0WC65,Genbank:YP_002348123.1,GeneID:1176035;gbkey=CDS;gene=proA;product=gamma-glutamyl phosphate reductase;protein_id=YP_002348123.1;transl_table=11
NC_003143.1	RefSeq	region	3584776	3584841	.	-	.	ID=id2315;Note=PS01223 Gamma-glutamyl phosphate reductase signature.;Dbxref=GeneID:1176035;gbkey=misc_feature;gene=proA
NC_003143.1	RefSeq	gene	3585823	3586926	.	-	.	ID=gene3103;Name=proB;Dbxref=GeneID:1176036;gbkey=Gene;gene=proB;locus_tag=YPO3222
NC_003143.1	RefSeq	CDS	3585823	3586926	.	-	0	ID=cds2955;Name=YP_002348124.1;Parent=gene3103;Note=catalyzes the formation of glutamate 5-phosphate from glutamate in proline biosynthesis;Dbxref=InterPro:IPR001048,InterPro:IPR001057,InterPro:IPR002478,InterPro:IPR005715,InterPro:IPR011529,UniProtKB%2FTrEMBL:Q0WC64,Genbank:YP_002348124.1,GeneID:1176036;gbkey=CDS;gene=proB;product=gamma-glutamyl kinase;protein_id=YP_002348124.1;transl_table=11
NC_003143.1	RefSeq	region	3586243	3586308	.	-	.	ID=id2316;Note=PS00902 Glutamate 5-kinase signature.;Dbxref=GeneID:1176036;gbkey=misc_feature;gene=proB
NC_003143.1	RefSeq	gene	3587103	3587504	.	-	.	ID=gene3104;Name=crl;Dbxref=GeneID:1176037;gbkey=Gene;gene=crl;locus_tag=YPO3223
NC_003143.1	RefSeq	CDS	3587103	3587504	.	-	0	ID=cds2956;Name=YP_002348125.1;Parent=gene3104;Note=involved in the expression of csgBA which is involved in curli formation%3B interacts with sigmaS;Dbxref=InterPro:IPR009986,UniProtKB%2FTrEMBL:Q7CK59,Genbank:YP_002348125.1,GeneID:1176037;gbkey=CDS;gene=crl;product=DNA-binding transcriptional regulator Crl;protein_id=YP_002348125.1;transl_table=11
NC_003143.1	RefSeq	gene	3587564	3588811	.	-	.	ID=gene3105;Name=frsA;Dbxref=GeneID:1176038;gbkey=Gene;gene=frsA;locus_tag=YPO3224
NC_003143.1	RefSeq	CDS	3587564	3588811	.	-	0	ID=cds2957;Name=YP_002348126.1;Parent=gene3105;Note=forms a 1:1 complex with the unphosphorylated from of enzyme IIAGlc%3B FrsA may promote fermentation;Dbxref=InterPro:IPR010520,UniProtKB%2FTrEMBL:Q0WC62,Genbank:YP_002348126.1,GeneID:1176038;gbkey=CDS;gene=frsA;product=fermentation%2Frespiration switch protein;protein_id=YP_002348126.1;transl_table=11
NC_003143.1	RefSeq	gene	3588938	3589396	.	-	.	ID=gene3106;Name=gpt;Dbxref=GeneID:1176039;gbkey=Gene;gene=gpt;gene_synonym=gxu;locus_tag=YPO3225
NC_003143.1	RefSeq	CDS	3588938	3589396	.	-	0	ID=cds2958;Name=YP_002348127.1;Parent=gene3106;Note=catalyzes the conversion of guanine%2C xanthine and%2C to a lesser extent%2C hypoxanthine to GMP%2C XMP and IMP%2C respectively;Dbxref=InterPro:IPR000836,InterPro:IPR002375,UniProtKB%2FTrEMBL:Q0WC61,Genbank:YP_002348127.1,GeneID:1176039;gbkey=CDS;gene=gpt;product=xanthine-guanine phosphoribosyltransferase;protein_id=YP_002348127.1;transl_table=11
NC_003143.1	RefSeq	region	3589109	3589147	.	-	.	ID=id2317;Note=PS00103 Purine%2Fpyrimidine phosphoribosyl transferases signature.;Dbxref=GeneID:1176039;gbkey=misc_feature;gene=gpt
NC_003143.1	RefSeq	gene	3589823	3590128	.	+	.	ID=gene3107;Name=YPO3226;Dbxref=GeneID:1176040;gbkey=Gene;locus_tag=YPO3226
NC_003143.1	RefSeq	CDS	3589823	3590128	.	+	0	ID=cds2959;Name=YP_002348128.1;Parent=gene3107;Dbxref=UniProtKB%2FTrEMBL:Q74WW9,Genbank:YP_002348128.1,GeneID:1176040;gbkey=CDS;product=hypothetical protein;protein_id=YP_002348128.1;transl_table=11
NC_003143.1	RefSeq	gene	3590325	3591929	.	+	.	ID=gene3108;Name=YPO3227;Dbxref=GeneID:1176041;gbkey=Gene;locus_tag=YPO3227
NC_003143.1	RefSeq	CDS	3590325	3591929	.	+	0	ID=cds2960;Name=YP_002348129.1;Parent=gene3108;Dbxref=InterPro:IPR000601,InterPro:IPR004302,InterPro:IPR013783,UniProtKB%2FTrEMBL:Q74WX0,Genbank:YP_002348129.1,GeneID:1176041;gbkey=CDS;product=carbohydrate-binding protein;protein_id=YP_002348129.1;transl_table=11
NC_003143.1	RefSeq	gene	3592389	3593300	.	-	.	ID=gene3109;Name=YPO3228;Dbxref=GeneID:1176042;gbkey=Gene;locus_tag=YPO3228
NC_003143.1	RefSeq	CDS	3592389	3593300	.	-	0	ID=cds2961;Name=YP_002348130.1;Parent=gene3109;Dbxref=InterPro:IPR000847,InterPro:IPR011991,UniProtKB%2FTrEMBL:Q7CK61,Genbank:YP_002348130.1,GeneID:1176042;gbkey=CDS;product=LysR family transcriptional regulator;protein_id=YP_002348130.1;transl_table=11
NC_003143.1	RefSeq	region	3593154	3593246	.	-	.	ID=id2318;Note=PS00044 Bacterial regulatory proteins%2C lysR family signature.;Dbxref=GeneID:1176042;gbkey=misc_feature
NC_003143.1	RefSeq	region	3593184	3593249	.	-	.	ID=id2319;Note=Predicted helix-turn-helix motif with score 1420 %28%2B4.02 SD%29 at aa 18-39%2C sequence ESITLAADKLCITASPLSRNIK;Dbxref=GeneID:1176042;gbkey=misc_feature
NC_003143.1	RefSeq	gene	3595175	3596635	.	+	.	ID=gene3110;Name=pepD;Dbxref=GeneID:1176044;gbkey=Gene;gene=pepD;gene_synonym=pepH;locus_tag=YPO3230
NC_003143.1	RefSeq	CDS	3595175	3596635	.	+	0	ID=cds2962;Name=YP_002348132.1;Parent=gene3110;Dbxref=InterPro:IPR001160,InterPro:IPR002933,InterPro:IPR011650,UniProtKB%2FTrEMBL:Q7CK62,Genbank:YP_002348132.1,GeneID:1176044;gbkey=CDS;gene=pepD;product=aminoacyl-histidine dipeptidase;protein_id=YP_002348132.1;transl_table=11
NC_003143.1	RefSeq	gene	3596749	3597807	.	-	.	ID=gene3111;Name=dinP;Dbxref=GeneID:1176045;gbkey=Gene;gene=dinP;locus_tag=YPO3231
NC_003143.1	RefSeq	CDS	3596749	3597807	.	-	0	ID=cds2963;Name=YP_002348133.1;Parent=gene3111;Note=involved in translesion DNA polymerization with beta clamp of polymerase III%3B belongs to Y family of polymerases%3B does not contain proofreading function;Dbxref=InterPro:IPR001126,UniProtKB%2FTrEMBL:Q0WC55,Genbank:YP_002348133.1,GeneID:1176045;gbkey=CDS;gene=dinP;product=DNA polymerase IV;protein_id=YP_002348133.1;transl_table=11
NC_003143.1	RefSeq	gene	3598163	3599110	.	+	.	ID=gene3112;Name=YPO3232;Dbxref=GeneID:1176046;gbkey=Gene;locus_tag=YPO3232
NC_003143.1	RefSeq	CDS	3598163	3599110	.	+	0	ID=cds2964;Name=YP_002348134.1;Parent=gene3112;Dbxref=InterPro:IPR004129,UniProtKB%2FTrEMBL:Q7CK63,Genbank:YP_002348134.1,GeneID:1176046;gbkey=CDS;product=hypothetical protein;protein_id=YP_002348134.1;transl_table=11
NC_003143.1	RefSeq	gene	3599354	3599581	.	-	.	ID=gene3113;Name=YPO3233;Dbxref=GeneID:1176047;gbkey=Gene;locus_tag=YPO3233
NC_003143.1	RefSeq	CDS	3599354	3599581	.	-	0	ID=cds2965;Name=YP_002348135.1;Parent=gene3113;Dbxref=InterPro:IPR007495,UniProtKB%2FTrEMBL:Q74WX5,Genbank:YP_002348135.1,GeneID:1176047;gbkey=CDS;product=hypothetical protein;protein_id=YP_002348135.1;transl_table=11
NC_003143.1	RefSeq	gene	3599594	3600616	.	-	.	ID=gene3114;Name=apbE;Dbxref=GeneID:1176048;gbkey=Gene;gene=apbE;locus_tag=YPO3234
NC_003143.1	RefSeq	CDS	3599594	3600616	.	-	0	ID=cds2966;Name=YP_002348136.1;Parent=gene3114;Dbxref=InterPro:IPR003374,UniProtKB%2FTrEMBL:Q0WC52,Genbank:YP_002348136.1,GeneID:1176048;gbkey=CDS;gene=apbE;product=thiamine biosynthesis lipoprotein;protein_id=YP_002348136.1;transl_table=11
NC_003143.1	RefSeq	region	3600554	3600586	.	-	.	ID=id2320;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site.;Dbxref=GeneID:1176048;gbkey=misc_feature;gene=apbE
NC_003143.1	RefSeq	gene	3600657	3601880	.	-	.	ID=gene3115;Name=nqrF;Dbxref=GeneID:1176049;gbkey=Gene;gene=nqrF;locus_tag=YPO3235
NC_003143.1	RefSeq	CDS	3600657	3601880	.	-	0	ID=cds2967;Name=YP_002348137.1;Parent=gene3115;Note=uses the energy from reduction of ubiquinone-1 to ubiquinol to move Na%28%2B%29 ions from the cytoplasm to the periplasm;Dbxref=InterPro:IPR001041,InterPro:IPR001433,InterPro:IPR001709,InterPro:IPR006058,InterPro:IPR008333,InterPro:IPR010205,InterPro:IPR012254,InterPro:IPR012675,UniProtKB%2FTrEMBL:Q0WC51,Genbank:YP_002348137.1,GeneID:1176049;gbkey=CDS;gene=nqrF;product=Na%28%2B%29-translocating NADH-quinone reductase subunit F;protein_id=YP_002348137.1;transl_table=11
NC_003143.1	RefSeq	gene	3601896	3602492	.	-	.	ID=gene3116;Name=nqrE;Dbxref=GeneID:1176050;gbkey=Gene;gene=nqrE;locus_tag=YPO3236
NC_003143.1	RefSeq	CDS	3601896	3602492	.	-	0	ID=cds2968;Name=YP_002348138.1;Parent=gene3116;Note=Part of the NQR complex which consists of NqrA%2C NqrB%2C NqrC%2C NqrD%2C NqrE and NqrF%3B NQR complex catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions%2C coupled with the transport of Na%28%2B%29 ions from the cytoplasm to the periplasm%3B NqrE is probably involved in the second step%2C the conversion of ubisemiquinone to ubiquinol.;Dbxref=InterPro:IPR003667,InterPro:IPR010967,UniProtKB%2FTrEMBL:Q0WC50,Genbank:YP_002348138.1,GeneID:1176050;gbkey=CDS;gene=nqrE;product=Na%28%2B%29-translocating NADH-quinone reductase subunit E;protein_id=YP_002348138.1;transl_table=11
NC_003143.1	RefSeq	gene	3602499	3603128	.	-	.	ID=gene3117;Name=nqrD;Dbxref=GeneID:1176051;gbkey=Gene;gene=nqrD;locus_tag=YPO3237
NC_003143.1	RefSeq	CDS	3602499	3603128	.	-	0	ID=cds2969;Name=YP_002348139.1;Parent=gene3117;Note=Part of the NQR complex which catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions%2C coupled with the transport of Na%28%2B%29 ions from the cytoplasm to the periplasm;Dbxref=InterPro:IPR003667,InterPro:IPR011292,UniProtKB%2FTrEMBL:Q0WC49,Genbank:YP_002348139.1,GeneID:1176051;gbkey=CDS;gene=nqrD;product=Na%28%2B%29-translocating NADH-quinone reductase subunit D;protein_id=YP_002348139.1;transl_table=11
NC_003143.1	RefSeq	gene	3603121	3603921	.	-	.	ID=gene3118;Name=nqrC;Dbxref=GeneID:1176052;gbkey=Gene;gene=nqrC;locus_tag=YPO3238
NC_003143.1	RefSeq	CDS	3603121	3603921	.	-	0	ID=cds2970;Name=YP_002348140.1;Parent=gene3118;Note=uses the energy from reduction of ubiquinone-1 to ubiquinol to move Na%28%2B%29 ions from the cytoplasm to the periplasm;Dbxref=InterPro:IPR007329,InterPro:IPR010204,UniProtKB%2FTrEMBL:Q0WC48,Genbank:YP_002348140.1,GeneID:1176052;gbkey=CDS;gene=nqrC;product=Na%28%2B%29-translocating NADH-quinone reductase subunit C;protein_id=YP_002348140.1;transl_table=11
NC_003143.1	RefSeq	region	3603418	3603441	.	-	.	ID=id2321;Note=PS00017 ATP%2FGTP-binding site motif A %28P-loop%29.;Dbxref=GeneID:1176052;gbkey=misc_feature;gene=nqrC
NC_003143.1	RefSeq	region	3603814	3603870	.	-	.	ID=id2322;Note=1 probable transmembrane helix predicted;Dbxref=GeneID:1176052;gbkey=misc_feature;gene=nqrC
NC_003143.1	RefSeq	gene	3603911	3605152	.	-	.	ID=gene3119;Name=nqrB;Dbxref=GeneID:1176053;gbkey=Gene;gene=nqrB;locus_tag=YPO3239
NC_003143.1	RefSeq	CDS	3603911	3605152	.	-	0	ID=cds2971;Name=YP_002348141.1;Parent=gene3119;Note=uses the energy from reduction of ubiquinone-1 to ubiquinol to move Na%28%2B%29 ions from the cytoplasm to the periplasm;Dbxref=InterPro:IPR000788,InterPro:IPR004338,InterPro:IPR010966,UniProtKB%2FTrEMBL:Q0WC47,Genbank:YP_002348141.1,GeneID:1176053;gbkey=CDS;gene=nqrB;product=Na%28%2B%29-translocating NADH-quinone reductase subunit B;protein_id=YP_002348141.1;transl_table=11
NC_003143.1	RefSeq	gene	3605156	3606499	.	-	.	ID=gene3120;Name=nqrA;Dbxref=GeneID:1176054;gbkey=Gene;gene=nqrA;locus_tag=YPO3240
NC_003143.1	RefSeq	CDS	3605156	3606499	.	-	0	ID=cds2972;Name=YP_002348142.1;Parent=gene3120;Note=uses the energy from reduction of ubiquinone-1 to ubiquinol to move Na%28%2B%29 ions from the cytoplasm to the periplasm;Dbxref=InterPro:IPR008703,InterPro:IPR011053,InterPro:IPR011054,UniProtKB%2FTrEMBL:Q0WC46,Genbank:YP_002348142.1,GeneID:1176054;gbkey=CDS;gene=nqrA;product=Na%28%2B%29-translocating NADH-quinone reductase subunit A;protein_id=YP_002348142.1;transl_table=11
NC_003143.1	RefSeq	gene	3606995	3607735	.	+	.	ID=gene3121;Name=yafK;Dbxref=GeneID:1176055;gbkey=Gene;gene=yafK;locus_tag=YPO3241
NC_003143.1	RefSeq	CDS	3606995	3607735	.	+	0	ID=cds2973;Name=YP_002348143.1;Parent=gene3121;Dbxref=InterPro:IPR010355,UniProtKB%2FTrEMBL:Q0WC45,Genbank:YP_002348143.1,GeneID:1176055;gbkey=CDS;gene=yafK;product=hypothetical protein;protein_id=YP_002348143.1;transl_table=11
NC_003143.1	RefSeq	gene	3607700	3608473	.	-	.	ID=gene3122;Name=yafK;Dbxref=GeneID:1176056;gbkey=Gene;gene=yafK;locus_tag=YPO3242
NC_003143.1	RefSeq	CDS	3607700	3608473	.	-	0	ID=cds2974;Name=YP_002348144.1;Parent=gene3122;Dbxref=InterPro:IPR000583,UniProtKB%2FTrEMBL:Q7CK64,Genbank:YP_002348144.1,GeneID:1176056;gbkey=CDS;product=hypothetical protein;protein_id=YP_002348144.1;transl_table=11
NC_003143.1	RefSeq	gene	3608676	3609257	.	-	.	ID=gene3123;Name=gmhA;Dbxref=GeneID:1176057;gbkey=Gene;gene=gmhA;gene_synonym=lpcA,tfrA;locus_tag=YPO3243
NC_003143.1	RefSeq	CDS	3608676	3609257	.	-	0	ID=cds2975;Name=YP_002348145.1;Parent=gene3123;Note=catalyzes the isomerization of sedoheptulose 7-phosphate to D-glycero-D-manno-heptose 7-phosphate;Dbxref=InterPro:IPR001347,InterPro:IPR004515,UniProtKB%2FTrEMBL:Q0WC43,Genbank:YP_002348145.1,GeneID:1176057;gbkey=CDS;gene=gmhA;product=phosphoheptose isomerase;protein_id=YP_002348145.1;transl_table=11
NC_003143.1	RefSeq	gene	3609497	3611944	.	+	.	ID=gene3124;Name=fadE;Dbxref=GeneID:1176058;gbkey=Gene;gene=fadE;locus_tag=YPO3244
NC_003143.1	RefSeq	CDS	3609497	3611944	.	+	0	ID=cds2976;Name=YP_002348146.1;Parent=gene3124;Note=functions in fatty acid oxidation%3B converts acyl-CoA and FAD to FADH2 and delta2-enoyl-CoA;Dbxref=InterPro:IPR006090,InterPro:IPR006091,InterPro:IPR006092,InterPro:IPR009075,InterPro:IPR009100,InterPro:IPR013764,InterPro:IPR013786,UniProtKB%2FTrEMBL:Q0WC42,Genbank:YP_002348146.1,GeneID:1176058;gbkey=CDS;gene=fadE;product=acyl-CoA dehydrogenase;protein_id=YP_002348146.1;transl_table=11
NC_003143.1	RefSeq	gene	3612116	3612862	.	-	.	ID=gene3125;Name=YPO3245;Dbxref=GeneID:1176059;gbkey=Gene;locus_tag=YPO3245
NC_003143.1	RefSeq	CDS	3612116	3612862	.	-	0	ID=cds2977;Name=YP_002348147.1;Parent=gene3125;Dbxref=InterPro:IPR004356,UniProtKB%2FTrEMBL:Q7CK65,Genbank:YP_002348147.1,GeneID:1176059;gbkey=CDS;product=hypothetical protein;protein_id=YP_002348147.1;transl_table=11
NC_003143.1	RefSeq	gene	3612864	3614717	.	-	.	ID=gene3126;Name=hmwC;Dbxref=GeneID:1176060;gbkey=Gene;gene=hmwC;locus_tag=YPO3246
NC_003143.1	RefSeq	CDS	3612864	3614717	.	-	0	ID=cds2978;Name=YP_002348148.1;Parent=gene3126;Dbxref=InterPro:IPR000276,UniProtKB%2FTrEMBL:Q7CK66,Genbank:YP_002348148.1,GeneID:1176060;gbkey=CDS;gene=hmwC;product=accessory processing protein;protein_id=YP_002348148.1;transl_table=11
NC_003143.1	RefSeq	region	3614403	3614453	.	-	.	ID=id2323;Note=PS00237 G-protein coupled receptors signature.;Dbxref=GeneID:1176060;gbkey=misc_feature;gene=hmwC
NC_003143.1	RefSeq	gene	3614872	3620604	.	-	.	ID=gene3127;Name=hmwA;Dbxref=GeneID:1176061;gbkey=Gene;gene=hmwA;locus_tag=YPO3247
NC_003143.1	RefSeq	CDS	3614872	3620604	.	-	0	ID=cds2979;Name=YP_002348149.1;Parent=gene3127;Dbxref=InterPro:IPR006626,InterPro:IPR008638,InterPro:IPR011050,UniProtKB%2FTrEMBL:Q0WC39,Genbank:YP_002348149.1,GeneID:1176061;gbkey=CDS;gene=hmwA;product=adhesin;protein_id=YP_002348149.1;transl_table=11
NC_003143.1	RefSeq	region	3618172	3618195	.	-	.	ID=id2324;Note=PS00017 ATP%2FGTP-binding site motif A %28P-loop%29.;Dbxref=GeneID:1176061;gbkey=misc_feature;gene=hmwA
NC_003143.1	RefSeq	region	3620398	3620463	.	-	.	ID=id2325;Note=1 probable transmembrane helix predicted;Dbxref=GeneID:1176061;gbkey=misc_feature;gene=hmwA
NC_003143.1	RefSeq	gene	3620645	3622435	.	-	.	ID=gene3128;Name=hxuB;Dbxref=GeneID:1176062;gbkey=Gene;gene=hxuB;locus_tag=YPO3248
NC_003143.1	RefSeq	CDS	3620645	3622435	.	-	0	ID=cds2980;Name=YP_002348150.1;Parent=gene3128;Dbxref=InterPro:IPR013686,UniProtKB%2FTrEMBL:Q7CK67,Genbank:YP_002348150.1,GeneID:1176062;gbkey=CDS;gene=hxuB;product=surface-exposed protein;protein_id=YP_002348150.1;transl_table=11
NC_003143.1	RefSeq	region	3622358	3622390	.	-	.	ID=id2326;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site.;Dbxref=GeneID:1176062;gbkey=misc_feature;gene=hxuB
NC_003143.1	RefSeq	gene	3623524	3624816	.	-	.	ID=gene3129;Name=YPO3249;Dbxref=GeneID:1176063;gbkey=Gene;locus_tag=YPO3249
NC_003143.1	RefSeq	CDS	3623524	3624816	.	-	0	ID=cds2981;Name=YP_002348151.1;Parent=gene3129;Note=allantoate amidohydrolase and N-carbamoyl-L-amino acid amidohydrolase are very similar%3B the allantoate amidohydrolase from Escherichia coli forms a dimer and binds zinc ions for catalytic activity and catalyzes the conversion of allantoate to %28S%29-ureidoglycolate and ammonia%3B carbamoyl amidohydrolase from Bacillus sp. converts N-carbamoyl amino acids to amino acids%2C ammonia%2C and carbon dioxide;Dbxref=InterPro:IPR001261,InterPro:IPR002933,InterPro:IPR010158,UniProtKB%2FTrEMBL:Q0WC37,Genbank:YP_002348151.1,GeneID:1176063;gbkey=CDS;product=allantoate amidohydrolase;protein_id=YP_002348151.1;transl_table=11
NC_003143.1	RefSeq	region	3624541	3624570	.	-	.	ID=id2327;Note=PS00758 ArgE %2F dapE %2F ACY1 %2F CPG2 %2F yscS family signature 1.;Dbxref=GeneID:1176063;gbkey=misc_feature
NC_003143.1	RefSeq	region	3627211	3628119	.	-	.	ID=id2328;Note=This CDS is disrupted by the insertion of the insertion sequence IS100. The full length CDS is similar to Bacillus halodurans aspartate transaminase Bh0762 TR:Q9KET7 %28EMBL:AP001509%29 %28416 aa%29 fasta scores: E%28%29: 0%2C 52.5%25 id in 406 aa%2C and to Xenopus laevis  alanine:glyoxylate aminotransferase Agt TR:CAC17015 %28EMBL:AJ278065%29 %28415 aa%29 fasta scores: E%28%29: 6.2e-27%2C 31.9%25 id in 392 aa;Dbxref=PSEUDO:CAL21844.1;gbkey=misc_feature;part=1%2F2;pseudo=true
NC_003143.1	RefSeq	region	3624816	3625250	.	-	.	ID=id2328;Note=This CDS is disrupted by the insertion of the insertion sequence IS100. The full length CDS is similar to Bacillus halodurans aspartate transaminase Bh0762 TR:Q9KET7 %28EMBL:AP001509%29 %28416 aa%29 fasta scores: E%28%29: 0%2C 52.5%25 id in 406 aa%2C and to Xenopus laevis  alanine:glyoxylate aminotransferase Agt TR:CAC17015 %28EMBL:AJ278065%29 %28415 aa%29 fasta scores: E%28%29: 6.2e-27%2C 31.9%25 id in 392 aa;Dbxref=PSEUDO:CAL21844.1;gbkey=misc_feature;part=2%2F2;pseudo=true
NC_003143.1	RefSeq	region	3625252	3625257	.	+	.	ID=id2329;Note=Sequence duplication around IS insertion;gbkey=misc_feature
NC_003143.1	RefSeq	repeat_region	3625258	3627211	.	+	.	ID=id2330;Note=insertion sequence:IS100;gbkey=repeat_region
NC_003143.1	RefSeq	repeat_region	3625258	3625285	.	+	.	ID=id2331;Note=IS100 inverted repeat;gbkey=repeat_region
NC_003143.1	RefSeq	gene	3625344	3626366	.	+	.	ID=gene3130;Name=y1093;Dbxref=GeneID:1176065;gbkey=Gene;gene=y1093;gene_synonym=ypmt1;locus_tag=YPO3251
NC_003143.1	RefSeq	CDS	3625344	3626366	.	+	0	ID=cds2982;Name=YP_002348152.1;Parent=gene3130;Dbxref=InterPro:IPR001584,InterPro:IPR006120,InterPro:IPR009057,InterPro:IPR012287,InterPro:IPR012337,UniProtKB%2FTrEMBL:Q7ARN5,Genbank:YP_002348152.1,GeneID:1176065;gbkey=CDS;gene=y1093;product=transposase for insertion sequence IS100;protein_id=YP_002348152.1;transl_table=11
NC_003143.1	RefSeq	region	3625395	3625460	.	+	.	ID=id2332;Note=Predicted helix-turn-helix motif with score 2147 %28%2B6.50 SD%29 at aa 18-39%2C sequence MSSRAIARELGISRNTVKRYLQ;Dbxref=GeneID:1176065;gbkey=misc_feature;gene=y1093
NC_003143.1	RefSeq	gene	3626363	3627145	.	+	.	ID=gene3131;Name=YPO3252;Note=ypmt1.57c;Dbxref=GeneID:1176066;gbkey=Gene;locus_tag=YPO3252
NC_003143.1	RefSeq	CDS	3626363	3627145	.	+	0	ID=cds2983;Name=YP_002348153.1;Parent=gene3131;Dbxref=InterPro:IPR001270,InterPro:IPR002611,InterPro:IPR003593,UniProtKB%2FTrEMBL:Q7ARK4,Genbank:YP_002348153.1,GeneID:1176066;gbkey=CDS;product=transposase%2FIS protein;protein_id=YP_002348153.1;transl_table=11
NC_003143.1	RefSeq	region	3626690	3626713	.	+	.	ID=id2333;Note=PS00017 ATP%2FGTP-binding site motif A %28P-loop%29.;Dbxref=GeneID:1176066;gbkey=misc_feature
NC_003143.1	RefSeq	repeat_region	3627184	3627211	.	-	.	ID=id2334;Note=IS100 inverted repeat;gbkey=repeat_region
NC_003143.1	RefSeq	region	3627212	3627217	.	+	.	ID=id2335;Note=Sequence duplication around IS insertion;gbkey=misc_feature
NC_003143.1	RefSeq	gene	3628151	3628897	.	-	.	ID=gene3132;Name=YPO3254;Dbxref=GeneID:1176067;gbkey=Gene;locus_tag=YPO3254
NC_003143.1	RefSeq	CDS	3628151	3628897	.	-	0	ID=cds2984;Name=YP_002348154.1;Parent=gene3132;Dbxref=InterPro:IPR003439,InterPro:IPR003593,UniProtKB%2FTrEMBL:Q7CK70,Genbank:YP_002348154.1,GeneID:1176067;gbkey=CDS;product=amino acid ABC transporter ATP-binding protein;protein_id=YP_002348154.1;transl_table=11
NC_003143.1	RefSeq	region	3628439	3628483	.	-	.	ID=id2336;Note=PS00211 ABC transporters family signature.;Dbxref=GeneID:1176067;gbkey=misc_feature
NC_003143.1	RefSeq	region	3628769	3628792	.	-	.	ID=id2337;Note=PS00017 ATP%2FGTP-binding site motif A %28P-loop%29.;Dbxref=GeneID:1176067;gbkey=misc_feature
NC_003143.1	RefSeq	gene	3628878	3629531	.	-	.	ID=gene3133;Name=YPO3255;Dbxref=GeneID:1176068;gbkey=Gene;locus_tag=YPO3255
NC_003143.1	RefSeq	CDS	3628878	3629531	.	-	0	ID=cds2985;Name=YP_002348155.1;Parent=gene3133;Dbxref=InterPro:IPR000515,InterPro:IPR010065,UniProtKB%2FTrEMBL:Q7CK71,Genbank:YP_002348155.1,GeneID:1176068;gbkey=CDS;product=amino acid ABC transporter permease;protein_id=YP_002348155.1;transl_table=11
NC_003143.1	RefSeq	gene	3629528	3630196	.	-	.	ID=gene3134;Name=YPO3256;Dbxref=GeneID:1176069;gbkey=Gene;locus_tag=YPO3256
NC_003143.1	RefSeq	CDS	3629528	3630196	.	-	0	ID=cds2986;Name=YP_002348156.1;Parent=gene3134;Dbxref=InterPro:IPR000515,InterPro:IPR010065,UniProtKB%2FTrEMBL:Q7CK72,Genbank:YP_002348156.1,GeneID:1176069;gbkey=CDS;product=amino acid ABC transporter permease;protein_id=YP_002348156.1;transl_table=11
NC_003143.1	RefSeq	region	3629774	3629860	.	-	.	ID=id2338;Note=PS00402 Binding-protein-dependent transport systems inner membrane comp. sign.;Dbxref=GeneID:1176069;gbkey=misc_feature
NC_003143.1	RefSeq	gene	3630209	3630997	.	-	.	ID=gene3135;Name=YPO3257;Dbxref=GeneID:1176070;gbkey=Gene;locus_tag=YPO3257
NC_003143.1	RefSeq	CDS	3630209	3630997	.	-	0	ID=cds2987;Name=YP_002348157.1;Parent=gene3135;Dbxref=InterPro:IPR001638,UniProtKB%2FTrEMBL:Q7CK73,Genbank:YP_002348157.1,GeneID:1176070;gbkey=CDS;product=amino acid ABC transporter substrate-binding protein;protein_id=YP_002348157.1;transl_table=11
NC_003143.1	RefSeq	region	3630785	3630826	.	-	.	ID=id2339;Note=PS01039 Bacterial extracellular solute-binding proteins%2C family 3 signature.;Dbxref=GeneID:1176070;gbkey=misc_feature
NC_003143.1	RefSeq	gene	3631325	3632170	.	-	.	ID=gene3136;Name=YPO3259;Dbxref=GeneID:1176072;gbkey=Gene;locus_tag=YPO3259
NC_003143.1	RefSeq	CDS	3631325	3632170	.	-	0	ID=cds2988;Name=YP_002348159.1;Parent=gene3136;Dbxref=InterPro:IPR000281,InterPro:IPR001347,InterPro:IPR009061,InterPro:IPR012287,UniProtKB%2FTrEMBL:Q7CK74,Genbank:YP_002348159.1,GeneID:1176072;gbkey=CDS;product=rpiR family transcriptional regulator;protein_id=YP_002348159.1;transl_table=11
NC_003143.1	RefSeq	region	3631988	3632053	.	-	.	ID=id2340;Note=Predicted helix-turn-helix motif with score 2101 %28%2B6.34 SD%29 at aa 40-61%2C sequence YNSAELARLSGVSKATVSRLFK;Dbxref=GeneID:1176072;gbkey=misc_feature
NC_003143.1	RefSeq	gene	3632468	3632671	.	+	.	ID=gene3137;Name=YPO3260;Dbxref=GeneID:1176073;gbkey=Gene;locus_tag=YPO3260
NC_003143.1	RefSeq	CDS	3632468	3632671	.	+	0	ID=cds2989;Name=YP_002348160.1;Parent=gene3137;Note=no significant database hits;Dbxref=UniProtKB%2FTrEMBL:Q0WC28,Genbank:YP_002348160.1,GeneID:1176073;gbkey=CDS;product=hypothetical protein;protein_id=YP_002348160.1;transl_table=11
NC_003143.1	RefSeq	gene	3632668	3634065	.	+	.	ID=gene3138;Name=YPO3261;Dbxref=GeneID:1176074;gbkey=Gene;locus_tag=YPO3261
NC_003143.1	RefSeq	CDS	3632668	3634065	.	+	0	ID=cds2990;Name=YP_002348161.1;Parent=gene3138;Note=catalyzes the hydrolysis of a monocarboxylic acid amid to form a monocarboxylate and ammonia;Dbxref=InterPro:IPR000120,UniProtKB%2FTrEMBL:Q7CK75,Genbank:YP_002348161.1,GeneID:1176074;gbkey=CDS;product=amidase;protein_id=YP_002348161.1;transl_table=11
NC_003143.1	RefSeq	gene	3634094	3634561	.	+	.	ID=gene3139;Name=YPO3262;Dbxref=GeneID:1176075;gbkey=Gene;locus_tag=YPO3262
NC_003143.1	RefSeq	CDS	3634094	3634561	.	+	0	ID=cds2991;Name=YP_002348162.1;Parent=gene3139;Note=no significant database hits;Dbxref=UniProtKB%2FTrEMBL:Q7CK76,Genbank:YP_002348162.1,GeneID:1176075;gbkey=CDS;product=hypothetical protein;protein_id=YP_002348162.1;transl_table=11
NC_003143.1	RefSeq	gene	3634789	3635988	.	+	.	ID=gene3140;Name=YPO3263;Dbxref=GeneID:1176076;gbkey=Gene;locus_tag=YPO3263
NC_003143.1	RefSeq	CDS	3634789	3635988	.	+	0	ID=cds2992;Name=YP_002348163.1;Parent=gene3140;Dbxref=InterPro:IPR007114,InterPro:IPR011701,UniProtKB%2FTrEMBL:Q7CK77,Genbank:YP_002348163.1,GeneID:1176076;gbkey=CDS;product=sugar transporter;protein_id=YP_002348163.1;transl_table=11
NC_003143.1	RefSeq	gene	3636148	3636921	.	+	.	ID=gene3141;Name=YPO3264;Dbxref=GeneID:1176077;gbkey=Gene;locus_tag=YPO3264
NC_003143.1	RefSeq	CDS	3636148	3636921	.	+	0	ID=cds2993;Name=YP_002348164.1;Parent=gene3141;Dbxref=InterPro:IPR011606,UniProtKB%2FTrEMBL:Q7CK78,Genbank:YP_002348164.1,GeneID:1176077;gbkey=CDS;product=amino acid transporter;protein_id=YP_002348164.1;transl_table=11
NC_003143.1	RefSeq	region	3636226	3636300	.	+	.	ID=id2341;Note=PS00043 Bacterial regulatory proteins%2C gntR family signature.;Dbxref=GeneID:1176077;gbkey=misc_feature
NC_003143.1	RefSeq	gene	3636918	3637259	.	+	.	ID=gene3142;Name=YPO3265;Dbxref=GeneID:1176078;gbkey=Gene;locus_tag=YPO3265
NC_003143.1	RefSeq	CDS	3636918	3637259	.	+	0	ID=cds2994;Name=YP_002348165.1;Parent=gene3142;Dbxref=UniProtKB%2FTrEMBL:Q7CK79,Genbank:YP_002348165.1,GeneID:1176078;gbkey=CDS;product=hypothetical protein;protein_id=YP_002348165.1;transl_table=11
NC_003143.1	RefSeq	gene	3637431	3637943	.	+	.	ID=gene3143;Name=emrR;Dbxref=GeneID:1176079;gbkey=Gene;gene=emrR;gene_synonym=mprA;locus_tag=YPO3266
NC_003143.1	RefSeq	CDS	3637431	3637943	.	+	0	ID=cds2995;Name=YP_002348166.1;Parent=gene3143;Note=DNA-binding transcriptional repressor of microcin B17 synthesis and multidrug efflux%3B negative regulator of the multidrug operon emrAB;Dbxref=InterPro:IPR000835,InterPro:IPR011991,UniProtKB%2FTrEMBL:Q0WC22,Genbank:YP_002348166.1,GeneID:1176079;gbkey=CDS;gene=emrR;product=transcriptional repressor MprA;protein_id=YP_002348166.1;transl_table=11
NC_003143.1	RefSeq	region	3637689	3637793	.	+	.	ID=id2342;Note=PS01117 Bacterial regulatory proteins%2C marR family signature.;Dbxref=GeneID:1176079;gbkey=misc_feature;gene=emrR
NC_003143.1	RefSeq	gene	3638327	3639499	.	+	.	ID=gene3144;Name=emrA;Dbxref=GeneID:1176080;gbkey=Gene;gene=emrA;locus_tag=YPO3267
NC_003143.1	RefSeq	CDS	3638327	3639499	.	+	0	ID=cds2996;Name=YP_002348167.1;Parent=gene3144;Dbxref=InterPro:IPR005694,InterPro:IPR006143,InterPro:IPR011053,UniProtKB%2FTrEMBL:Q0WC21,Genbank:YP_002348167.1,GeneID:1176080;gbkey=CDS;gene=emrA;product=multidrug resistance protein A;protein_id=YP_002348167.1;transl_table=11
NC_003143.1	RefSeq	region	3638393	3638461	.	+	.	ID=id2343;Note=1 probable transmembrane helix predicted;Dbxref=GeneID:1176080;gbkey=misc_feature;gene=emrA
NC_003143.1	RefSeq	gene	3639538	3641073	.	+	.	ID=gene3145;Name=emrB;Dbxref=GeneID:1176081;gbkey=Gene;gene=emrB;locus_tag=YPO3268
NC_003143.1	RefSeq	CDS	3639538	3641073	.	+	0	ID=cds2997;Name=YP_002348168.1;Parent=gene3145;Dbxref=InterPro:IPR001411,InterPro:IPR004638,InterPro:IPR007114,InterPro:IPR011701,UniProtKB%2FTrEMBL:Q7CK80,Genbank:YP_002348168.1,GeneID:1176081;gbkey=CDS;gene=emrB;product=multidrug resistance protein B;protein_id=YP_002348168.1;transl_table=11
NC_003143.1	RefSeq	gene	3641196	3642362	.	-	.	ID=gene3146;Name=yfiF;Dbxref=GeneID:1176082;gbkey=Gene;gene=yfiF;locus_tag=YPO3269
NC_003143.1	RefSeq	CDS	3641196	3642362	.	-	0	ID=cds2998;Name=YP_002348169.1;Parent=gene3146;Dbxref=InterPro:IPR001537,InterPro:IPR013123,UniProtKB%2FTrEMBL:Q0WC19,Genbank:YP_002348169.1,GeneID:1176082;gbkey=CDS;gene=yfiF;product=methyltransferase;protein_id=YP_002348169.1;transl_table=11
NC_003143.1	RefSeq	gene	3642614	3643051	.	+	.	ID=gene3147;Name=trxC;Dbxref=GeneID:1176083;gbkey=Gene;gene=trxC;locus_tag=YPO3270
NC_003143.1	RefSeq	CDS	3642614	3643051	.	+	0	ID=cds2999;Name=YP_002348170.1;Parent=gene3147;Dbxref=InterPro:IPR005746,InterPro:IPR006662,InterPro:IPR012335,InterPro:IPR012336,InterPro:IPR013766,UniProtKB%2FTrEMBL:Q7CK81,Genbank:YP_002348170.1,GeneID:1176083;gbkey=CDS;gene=trxC;product=thioredoxin;protein_id=YP_002348170.1;transl_table=11
NC_003143.1	RefSeq	region	3642779	3642835	.	+	.	ID=id2344;Note=PS00194 Thioredoxin family active site.;Dbxref=GeneID:1176083;gbkey=misc_feature;gene=trxC
NC_003143.1	RefSeq	gene	3643221	3643970	.	+	.	ID=gene3148;Name=YPO3271;Dbxref=GeneID:1176084;gbkey=Gene;locus_tag=YPO3271
NC_003143.1	RefSeq	CDS	3643221	3643970	.	+	0	ID=cds3000;Name=YP_002348171.1;Parent=gene3148;Dbxref=InterPro:IPR005636,UniProtKB%2FTrEMBL:Q7CK82,Genbank:YP_002348171.1,GeneID:1176084;gbkey=CDS;product=hypothetical protein;protein_id=YP_002348171.1;transl_table=11
NC_003143.1	RefSeq	gene	3644013	3646655	.	+	.	ID=gene3149;Name=yfiQ;Dbxref=GeneID:1176085;gbkey=Gene;gene=yfiQ;locus_tag=YPO3272
NC_003143.1	RefSeq	CDS	3644013	3646655	.	+	0	ID=cds3001;Name=YP_002348172.1;Parent=gene3149;Dbxref=InterPro:IPR000182,InterPro:IPR003781,InterPro:IPR011761,InterPro:IPR013816,UniProtKB%2FTrEMBL:Q0WC16,Genbank:YP_002348172.1,GeneID:1176085;gbkey=CDS;gene=yfiQ;product=acetyltransferase;protein_id=YP_002348172.1;transl_table=11
NC_003143.1	RefSeq	gene	3646828	3648186	.	+	.	ID=gene3150;Name=pssA;Dbxref=GeneID:1176086;gbkey=Gene;gene=pssA;locus_tag=YPO3273
NC_003143.1	RefSeq	CDS	3646828	3648186	.	+	0	ID=cds3002;Name=YP_002348173.1;Parent=gene3150;Note=catalyzes de novo synthesis of phosphatidylserine from CDP-diacylglycerol and L-serine which leads eventually to the production of phosphatidylethanolamine%3B bounds to the ribosome;Dbxref=InterPro:IPR001736,UniProtKB%2FTrEMBL:Q0WC15,Genbank:YP_002348173.1,GeneID:1176086;gbkey=CDS;gene=pssA;product=phosphatidylserine synthase;protein_id=YP_002348173.1;transl_table=11
NC_003143.1	RefSeq	gene	3648248	3648589	.	+	.	ID=gene3151;Name=YPO3274;Dbxref=GeneID:1176087;gbkey=Gene;locus_tag=YPO3274
NC_003143.1	RefSeq	CDS	3648248	3648589	.	+	0	ID=cds3003;Name=YP_002348174.1;Parent=gene3151;Dbxref=UniProtKB%2FTrEMBL:Q7CK83,Genbank:YP_002348174.1,GeneID:1176087;gbkey=CDS;product=hypothetical protein;protein_id=YP_002348174.1;transl_table=11
NC_003143.1	RefSeq	region	3648281	3648313	.	+	.	ID=id2345;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site.;Dbxref=GeneID:1176087;gbkey=misc_feature
NC_003143.1	RefSeq	gene	3648977	3649092	.	-	.	ID=gene3152;Name=YPOr07;Dbxref=GeneID:1176088;gbkey=Gene;locus_tag=YPOr07
NC_003143.1	RefSeq	rRNA	3648977	3649092	.	-	.	ID=rna61;Parent=gene3152;Note=match to 5SrRNA 1..234  blast score 1149  percent identity 99  %28incl. 23S-5S spacer%29;Dbxref=GeneID:1176088;gbkey=rRNA;product=5S ribosomal RNA
NC_003143.1	RefSeq	exon	3648977	3649092	.	-	.	ID=id2346;Parent=rna61;Note=match to 5SrRNA 1..234  blast score 1149  percent identity 99  %28incl. 23S-5S spacer%29;Dbxref=GeneID:1176088;gbkey=rRNA;product=5S ribosomal RNA
NC_003143.1	RefSeq	gene	3649202	3652108	.	-	.	ID=gene3153;Name=YPOr08;Dbxref=GeneID:1176089;gbkey=Gene;locus_tag=YPOr08
NC_003143.1	RefSeq	rRNA	3649202	3652108	.	-	.	ID=rna62;Parent=gene3153;Note=match to 23S_rRNA 1..2906 %28Y. enterocolitica 23S EMBL:U77925 %29;Dbxref=GeneID:1176089;gbkey=rRNA;product=23S ribosomal RNA
NC_003143.1	RefSeq	exon	3649202	3652108	.	-	.	ID=id2347;Parent=rna62;Note=match to 23S_rRNA 1..2906 %28Y. enterocolitica 23S EMBL:U77925 %29;Dbxref=GeneID:1176089;gbkey=rRNA;product=23S ribosomal RNA
NC_003143.1	RefSeq	gene	3652327	3652402	.	-	.	ID=gene3154;Name=YPt_45;Dbxref=GeneID:1176090;gbkey=Gene;locus_tag=YPt_45
NC_003143.1	RefSeq	tRNA	3652327	3652402	.	-	.	ID=rna63;Parent=gene3154;Note=tRNA Ala anticodon TGC%2C Cove score 93.97;Dbxref=GeneID:1176090;gbkey=tRNA;product=tRNA-Ala
NC_003143.1	RefSeq	exon	3652327	3652402	.	-	.	ID=id2348;Parent=rna63;Note=tRNA Ala anticodon TGC%2C Cove score 93.97;Dbxref=GeneID:1176090;gbkey=tRNA;product=tRNA-Ala
NC_003143.1	RefSeq	gene	3652454	3652530	.	-	.	ID=gene3155;Name=YPt_46;Dbxref=GeneID:1176091;gbkey=Gene;locus_tag=YPt_46
NC_003143.1	RefSeq	tRNA	3652454	3652530	.	-	.	ID=rna64;Parent=gene3155;Note=tRNA Ile anticodon GAT%2C Cove score 94.77;Dbxref=GeneID:1176091;gbkey=tRNA;product=tRNA-Ile
NC_003143.1	RefSeq	exon	3652454	3652530	.	-	.	ID=id2349;Parent=rna64;Note=tRNA Ile anticodon GAT%2C Cove score 94.77;Dbxref=GeneID:1176091;gbkey=tRNA;product=tRNA-Ile
NC_003143.1	RefSeq	gene	3652660	3654148	.	-	.	ID=gene3156;Name=YPOr09;Dbxref=GeneID:1176092;gbkey=Gene;locus_tag=YPOr09
NC_003143.1	RefSeq	rRNA	3652660	3654148	.	-	.	ID=rna65;Parent=gene3156;Note=match to 16S_rRNA 1..14789 %28EMBL:YPE16SA%29;Dbxref=GeneID:1176092;gbkey=rRNA;product=16S ribosomal RNA
NC_003143.1	RefSeq	exon	3652660	3654148	.	-	.	ID=id2350;Parent=rna65;Note=match to 16S_rRNA 1..14789 %28EMBL:YPE16SA%29;Dbxref=GeneID:1176092;gbkey=rRNA;product=16S ribosomal RNA
NC_003143.1	RefSeq	gene	3654181	3654366	.	+	.	ID=gene3157;Name=YPO3274a;Dbxref=GeneID:16744772;gbkey=Gene;locus_tag=YPO3274a
NC_003143.1	RefSeq	CDS	3654181	3654366	.	+	0	ID=cds3004;Name=YP_008479724.1;Parent=gene3157;Dbxref=Genbank:YP_008479724.1,GeneID:16744772;gbkey=CDS;product=hypothetical protein;protein_id=YP_008479724.1;transl_table=11
NC_003143.1	RefSeq	gene	3654692	3657265	.	-	.	ID=gene3158;Name=clpB;Dbxref=GeneID:1176093;gbkey=Gene;gene=clpB;gene_synonym=htpM;locus_tag=YPO3275
NC_003143.1	RefSeq	CDS	3654692	3657265	.	-	0	ID=cds3005;Name=YP_002348175.1;Parent=gene3158;Dbxref=InterPro:IPR001270,InterPro:IPR003593,InterPro:IPR003959,InterPro:IPR004176,InterPro:IPR013093,UniProtKB%2FTrEMBL:Q0WC13,Genbank:YP_002348175.1,GeneID:1176093;gbkey=CDS;gene=clpB;product=protein disaggregation chaperone;protein_id=YP_002348175.1;transl_table=11
NC_003143.1	RefSeq	region	3655319	3655375	.	-	.	ID=id2351;Note=PS00871 Chaperonins clpA%2FB signature 2.;Dbxref=GeneID:1176093;gbkey=misc_feature;gene=clpB
NC_003143.1	RefSeq	region	3655430	3655453	.	-	.	ID=id2352;Note=PS00017 ATP%2FGTP-binding site motif A %28P-loop%29.;Dbxref=GeneID:1176093;gbkey=misc_feature;gene=clpB
NC_003143.1	RefSeq	region	3655697	3655720	.	-	.	ID=id2353;Note=PS00017 ATP%2FGTP-binding site motif A %28P-loop%29.;Dbxref=GeneID:1176093;gbkey=misc_feature;gene=clpB
NC_003143.1	RefSeq	region	3656348	3656386	.	-	.	ID=id2354;Note=PS00870 Chaperonins clpA%2FB signature 1.;Dbxref=GeneID:1176093;gbkey=misc_feature;gene=clpB
NC_003143.1	RefSeq	region	3656627	3656650	.	-	.	ID=id2355;Note=PS00017 ATP%2FGTP-binding site motif A %28P-loop%29.;Dbxref=GeneID:1176093;gbkey=misc_feature;gene=clpB
NC_003143.1	RefSeq	gene	3657395	3658126	.	-	.	ID=gene3159;Name=YPO3276;Dbxref=GeneID:1176094;gbkey=Gene;locus_tag=YPO3276
NC_003143.1	RefSeq	CDS	3657395	3658126	.	-	0	ID=cds3006;Name=YP_002348176.1;Parent=gene3159;Dbxref=InterPro:IPR003730,UniProtKB%2FTrEMBL:Q7CK84,Genbank:YP_002348176.1,GeneID:1176094;gbkey=CDS;product=hypothetical protein;protein_id=YP_002348176.1;transl_table=11
NC_003143.1	RefSeq	gene	3658128	3659105	.	-	.	ID=gene3160;Name=rluD;Dbxref=GeneID:1176095;gbkey=Gene;gene=rluD;gene_synonym=sfhB;locus_tag=YPO3277
NC_003143.1	RefSeq	CDS	3658128	3659105	.	-	0	ID=cds3007;Name=YP_002348177.1;Parent=gene3160;Note=responsible for synthesis of pseudouridine from uracil at positions 1911%2C 1915 and 1917 in 23S ribosomal RNA;Dbxref=InterPro:IPR002942,InterPro:IPR006145,InterPro:IPR006224,InterPro:IPR006225,UniProtKB%2FTrEMBL:Q0WC11,Genbank:YP_002348177.1,GeneID:1176095;gbkey=CDS;gene=rluD;product=23S rRNA pseudouridine synthase D;protein_id=YP_002348177.1;transl_table=11
NC_003143.1	RefSeq	region	3658659	3658703	.	-	.	ID=id2356;Note=PS01129 Rlu family of pseudouridine synthase signature.;Dbxref=GeneID:1176095;gbkey=misc_feature;gene=rluD
NC_003143.1	RefSeq	gene	3659241	3659972	.	+	.	ID=gene3161;Name=yfiO;Dbxref=GeneID:1176096;gbkey=Gene;gene=yfiO;locus_tag=YPO3278
NC_003143.1	RefSeq	CDS	3659241	3659972	.	+	0	ID=cds3008;Name=YP_002348178.1;Parent=gene3161;Note=with YaeT%2C NlpB and YfgL forms a complex involved in the proper assembly and%2For targeting of OMPs to the outer membrane%3B involved in resistance to ampicillin and tetracycline;Dbxref=InterPro:IPR011990,UniProtKB%2FTrEMBL:Q7CK85,Genbank:YP_002348178.1,GeneID:1176096;gbkey=CDS;gene=yfiO;product=outer membrane protein assembly complex subunit YfiO;protein_id=YP_002348178.1;transl_table=11
NC_003143.1	RefSeq	region	3659268	3659300	.	+	.	ID=id2357;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site.;Dbxref=GeneID:1176096;gbkey=misc_feature;gene=yfiO
NC_003143.1	RefSeq	gene	3660327	3660689	.	+	.	ID=gene3162;Name=yfiA;Dbxref=GeneID:1176097;gbkey=Gene;gene=yfiA;locus_tag=YPO3279
NC_003143.1	RefSeq	CDS	3660327	3660689	.	+	0	ID=cds3009;Name=YP_002348179.1;Parent=gene3162;Dbxref=InterPro:IPR003489,UniProtKB%2FTrEMBL:Q0WC09,Genbank:YP_002348179.1,GeneID:1176097;gbkey=CDS;gene=yfiA;product=sigma 54 modulation protein;protein_id=YP_002348179.1;transl_table=11
NC_003143.1	RefSeq	repeat_region	3660912	3661623	.	-	.	ID=id2358;Note=Contains a %27G%27 at nucleotide position 315%7EIS200-like insertion sequence:IS1541;gbkey=repeat_region
NC_003143.1	RefSeq	gene	3661020	3661478	.	-	.	ID=gene3163;Name=tnp;Dbxref=GeneID:1176098;gbkey=Gene;gene=tnp;locus_tag=YPO3280
NC_003143.1	RefSeq	CDS	3661020	3661478	.	-	0	ID=cds3010;Name=YP_002348180.1;Parent=gene3163;Dbxref=InterPro:IPR002686,UniProtKB%2FTrEMBL:Q74YM6,Genbank:YP_002348180.1,GeneID:1176098;gbkey=CDS;gene=tnp;product=transposase for the IS1541 insertion element;protein_id=YP_002348180.1;transl_table=11
NC_003143.1	RefSeq	region	3661761	3662693	.	+	.	ID=id2359;Note=This CDS is disrupted by the insertion of the insertion sequence IS100. The full length CDS is similar to Escherichia coli P-protein %5Bincludes: chorismate mutase and prephenate dehydratase%5D PheA SW:PHEA_ECOLI %28P07022%29 %28386 aa%29 fasta scores: E%28%29: 0%2C 76.8%25 id in 383 aa%2C and to Erwinia herbicola p-protein %5Bincludes: chorismate mutase pheA SW:PHEA_ERWHE %28Q02286%29 %28387 aa%29 fasta scores: E%28%29: 0%2C77.5%25 id in 382 aa;Dbxref=PSEUDO:CAL21874.1;gbkey=misc_feature;part=1%2F2;pseudo=true
NC_003143.1	RefSeq	region	3664653	3664877	.	+	.	ID=id2359;Note=This CDS is disrupted by the insertion of the insertion sequence IS100. The full length CDS is similar to Escherichia coli P-protein %5Bincludes: chorismate mutase and prephenate dehydratase%5D PheA SW:PHEA_ECOLI %28P07022%29 %28386 aa%29 fasta scores: E%28%29: 0%2C 76.8%25 id in 383 aa%2C and to Erwinia herbicola p-protein %5Bincludes: chorismate mutase pheA SW:PHEA_ERWHE %28Q02286%29 %28387 aa%29 fasta scores: E%28%29: 0%2C77.5%25 id in 382 aa;Dbxref=PSEUDO:CAL21874.1;gbkey=misc_feature;part=2%2F2;pseudo=true
NC_003143.1	RefSeq	region	3662538	3662606	.	+	.	ID=id2360;Note=PS00857 Prephenate dehydratase signature 1.;gbkey=misc_feature
NC_003143.1	RefSeq	region	3662690	3662694	.	+	.	ID=id2361;Note=Sequence duplication around IS insertion;gbkey=misc_feature
NC_003143.1	RefSeq	repeat_region	3662695	3664648	.	+	.	ID=id2362;Note=insertion sequence:IS100;gbkey=repeat_region
NC_003143.1	RefSeq	repeat_region	3662695	3662722	.	+	.	ID=id2363;Note=IS100 inverted repeat;gbkey=repeat_region
NC_003143.1	RefSeq	gene	3662781	3663803	.	+	.	ID=gene3164;Name=y1093;Dbxref=GeneID:1176100;gbkey=Gene;gene=y1093;gene_synonym=ypmt1;locus_tag=YPO3282
NC_003143.1	RefSeq	CDS	3662781	3663803	.	+	0	ID=cds3011;Name=YP_002348181.1;Parent=gene3164;Dbxref=InterPro:IPR001584,InterPro:IPR006120,InterPro:IPR009057,InterPro:IPR012287,InterPro:IPR012337,UniProtKB%2FTrEMBL:Q7ARN5,Genbank:YP_002348181.1,GeneID:1176100;gbkey=CDS;gene=y1093;product=transposase for insertion sequence IS100;protein_id=YP_002348181.1;transl_table=11
NC_003143.1	RefSeq	region	3662832	3662897	.	+	.	ID=id2364;Note=Predicted helix-turn-helix motif with score 2147 %28%2B6.50 SD%29 at aa 18-39%2C sequence MSSRAIARELGISRNTVKRYLQ;Dbxref=GeneID:1176100;gbkey=misc_feature;gene=y1093
NC_003143.1	RefSeq	gene	3663800	3664582	.	+	.	ID=gene3165;Name=YPO3283;Note=ypmt1.57c;Dbxref=GeneID:1176101;gbkey=Gene;locus_tag=YPO3283
NC_003143.1	RefSeq	CDS	3663800	3664582	.	+	0	ID=cds3012;Name=YP_002348182.1;Parent=gene3165;Dbxref=InterPro:IPR001270,InterPro:IPR002611,InterPro:IPR003593,UniProtKB%2FTrEMBL:Q7ARK4,Genbank:YP_002348182.1,GeneID:1176101;gbkey=CDS;product=transposase%2FIS protein;protein_id=YP_002348182.1;transl_table=11
NC_003143.1	RefSeq	region	3664127	3664150	.	+	.	ID=id2365;Note=PS00017 ATP%2FGTP-binding site motif A %28P-loop%29.;Dbxref=GeneID:1176101;gbkey=misc_feature
NC_003143.1	RefSeq	repeat_region	3664621	3664648	.	-	.	ID=id2366;Note=IS100 inverted repeat;gbkey=repeat_region
NC_003143.1	RefSeq	region	3664649	3664653	.	+	.	ID=id2367;Note=Sequence duplication around IS insertion;gbkey=misc_feature
NC_003143.1	RefSeq	region	3664689	3664712	.	+	.	ID=id2368;Note=PS00858 Prephenate dehydratase signature 2.;gbkey=misc_feature
NC_003143.1	RefSeq	gene	3664982	3666103	.	-	.	ID=gene3166;Name=tyrA;Dbxref=GeneID:1176102;gbkey=Gene;gene=tyrA;locus_tag=YPO3285
NC_003143.1	RefSeq	CDS	3664982	3666103	.	-	0	ID=cds3013;Name=YP_002348183.1;Parent=gene3166;Note=catalyzes the formation of prephenate from chorismate and the formation of 4-hydroxyphenylpyruvate from prephenate in tyrosine biosynthesis;Dbxref=InterPro:IPR002701,InterPro:IPR003099,InterPro:IPR008244,InterPro:IPR011277,UniProtKB%2FTrEMBL:Q7CK89,Genbank:YP_002348183.1,GeneID:1176102;gbkey=CDS;gene=tyrA;product=bifunctional chorismate mutase%2Fprephenate dehydrogenase;protein_id=YP_002348183.1;transl_table=11
NC_003143.1	RefSeq	gene	3666116	3667186	.	-	.	ID=gene3167;Name=aroF;Dbxref=GeneID:1176103;gbkey=Gene;gene=aroF;locus_tag=YPO3286
NC_003143.1	RefSeq	CDS	3666116	3667186	.	-	0	ID=cds3014;Name=YP_002348184.1;Parent=gene3167;Note=catalyzes the formation of 3-deoxy-D-arabino-hept-2-ulosonate 7 phosphate from phosphoenolpyruvate and D-erythrose 4-phosphate%2C tyrosine sensitive;Dbxref=InterPro:IPR006218,InterPro:IPR006219,UniProtKB%2FTrEMBL:Q0WC04,Genbank:YP_002348184.1,GeneID:1176103;gbkey=CDS;gene=aroF;product=phospho-2-dehydro-3-deoxyheptonate aldolase;protein_id=YP_002348184.1;transl_table=11
NC_003143.1	RefSeq	gene	3667419	3668135	.	+	.	ID=gene3168;Name=YPO3287;Dbxref=GeneID:1176104;gbkey=Gene;locus_tag=YPO3287
NC_003143.1	RefSeq	CDS	3667419	3668135	.	+	0	ID=cds3015;Name=YP_002348185.1;Parent=gene3168;Note=unknown function%3B when overproduced it confers drug-resistance;Dbxref=InterPro:IPR001789,InterPro:IPR007492,InterPro:IPR008246,InterPro:IPR011006,UniProtKB%2FTrEMBL:Q0WC03,Genbank:YP_002348185.1,GeneID:1176104;gbkey=CDS;product=two-component response-regulatory protein YehT;protein_id=YP_002348185.1;transl_table=11
NC_003143.1	RefSeq	gene	3668564	3669908	.	+	.	ID=gene3169;Name=dcuB;Dbxref=GeneID:1176105;gbkey=Gene;gene=dcuB;gene_synonym=genF;locus_tag=YPO3288;pseudo=true
NC_003143.1	RefSeq	gene	3670231	3670998	.	+	.	ID=gene3170;Name=ydiY;Dbxref=GeneID:1176106;gbkey=Gene;gene=ydiY;locus_tag=YPO3290
NC_003143.1	RefSeq	CDS	3670231	3670998	.	+	0	ID=cds3016;Name=YP_002348186.1;Parent=gene3170;Dbxref=InterPro:IPR007433,UniProtKB%2FTrEMBL:Q0WC02,Genbank:YP_002348186.1,GeneID:1176106;gbkey=CDS;gene=ydiY;product=hypothetical protein;protein_id=YP_002348186.1;transl_table=11
NC_003143.1	RefSeq	repeat_region	3671193	3671904	.	-	.	ID=id2369;Note=Contains a %27A%27 at nucleotide position 315%7EIS200-like insertion sequence:IS1541;gbkey=repeat_region
NC_003143.1	RefSeq	gene	3671301	3671759	.	-	.	ID=gene3171;Name=tnp;Dbxref=GeneID:1176107;gbkey=Gene;gene=tnp;locus_tag=YPO3291
NC_003143.1	RefSeq	CDS	3671301	3671759	.	-	0	ID=cds3017;Name=YP_002348187.1;Parent=gene3171;Dbxref=InterPro:IPR002686,UniProtKB%2FTrEMBL:Q56938,Genbank:YP_002348187.1,GeneID:1176107;gbkey=CDS;gene=tnp;product=transposase for the IS1541 insertion element;protein_id=YP_002348187.1;transl_table=11
NC_003143.1	RefSeq	gene	3671971	3672318	.	-	.	ID=gene3172;Name=rplS;Dbxref=GeneID:1176108;gbkey=Gene;gene=rplS;locus_tag=YPO3292
NC_003143.1	RefSeq	CDS	3671971	3672318	.	-	0	ID=cds3018;Name=YP_002348188.1;Parent=gene3172;Note=this protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site;Dbxref=InterPro:IPR001857,InterPro:IPR009063,UniProtKB%2FTrEMBL:Q0WC00,Genbank:YP_002348188.1,GeneID:1176108;gbkey=CDS;gene=rplS;product=50S ribosomal protein L19;protein_id=YP_002348188.1;transl_table=11
NC_003143.1	RefSeq	gene	3672399	3673139	.	-	.	ID=gene3173;Name=trmD;Dbxref=GeneID:1176109;gbkey=Gene;gene=trmD;locus_tag=YPO3293
NC_003143.1	RefSeq	CDS	3672399	3673139	.	-	0	ID=cds3019;Name=YP_002348189.1;Parent=gene3173;Note=methylates guanosine-37 in various tRNAs%3B uses S-adenosyl-L-methionine to transfer methyl group to tRNA;Dbxref=InterPro:IPR002649,UniProtKB%2FTrEMBL:Q0WBZ9,Genbank:YP_002348189.1,GeneID:1176109;gbkey=CDS;gene=trmD;product=tRNA %28guanine-N%281%29-%29-methyltransferase;protein_id=YP_002348189.1;transl_table=11
NC_003143.1	RefSeq	gene	3673178	3673726	.	-	.	ID=gene3174;Name=rimM;Dbxref=GeneID:1176110;gbkey=Gene;gene=rimM;locus_tag=YPO3294
NC_003143.1	RefSeq	CDS	3673178	3673726	.	-	0	ID=cds3020;Name=YP_002348190.1;Parent=gene3174;Note=Essential for efficient processing of 16S rRNA;Dbxref=InterPro:IPR002676,InterPro:IPR007903,InterPro:IPR011033,InterPro:IPR011961,UniProtKB%2FTrEMBL:Q0WBZ8,Genbank:YP_002348190.1,GeneID:1176110;gbkey=CDS;gene=rimM;product=16S rRNA-processing protein RimM;protein_id=YP_002348190.1;transl_table=11
NC_003143.1	RefSeq	gene	3673748	3673996	.	-	.	ID=gene3175;Name=rpsP;Dbxref=GeneID:1176111;gbkey=Gene;gene=rpsP;locus_tag=YPO3295
NC_003143.1	RefSeq	CDS	3673748	3673996	.	-	0	ID=cds3021;Name=YP_002348191.1;Parent=gene3175;Note=binds to lower part of 30S body where it stabilizes two domains%3B required for efficient assembly of 30S%3B in Escherichia coli this protein has nuclease activity;Dbxref=InterPro:IPR000307,UniProtKB%2FTrEMBL:Q0WBZ7,Genbank:YP_002348191.1,GeneID:1176111;gbkey=CDS;gene=rpsP;product=30S ribosomal protein S16;protein_id=YP_002348191.1;transl_table=11
NC_003143.1	RefSeq	region	3673964	3673993	.	-	.	ID=id2370;Note=PS00732 Ribosomal protein S16 signature.;Dbxref=GeneID:1176111;gbkey=misc_feature;gene=rpsP
NC_003143.1	RefSeq	gene	3674224	3675585	.	-	.	ID=gene3176;Name=ffh;Dbxref=GeneID:1176112;gbkey=Gene;gene=ffh;locus_tag=YPO3296
NC_003143.1	RefSeq	CDS	3674224	3675585	.	-	0	ID=cds3022;Name=YP_002348192.1;Parent=gene3176;Note=with 4.5S RNA forms a signal recognition particle involved in targeting and integration of inner membrane proteins;Dbxref=InterPro:IPR000897,InterPro:IPR003593,InterPro:IPR004125,InterPro:IPR004780,InterPro:IPR013822,UniProtKB%2FTrEMBL:Q7CK91,Genbank:YP_002348192.1,GeneID:1176112;gbkey=CDS;gene=ffh;product=signal recognition particle protein;protein_id=YP_002348192.1;transl_table=11
NC_003143.1	RefSeq	region	3674740	3674781	.	-	.	ID=id2371;Note=PS00300 SRP54-type proteins GTP-binding domain signature.;Dbxref=GeneID:1176112;gbkey=misc_feature;gene=ffh
NC_003143.1	RefSeq	region	3674851	3674868	.	-	.	ID=id2372;Note=PS00343 Gram-positive cocci surface proteins %27anchoring%27 hexapeptide.;Dbxref=GeneID:1176112;gbkey=misc_feature;gene=ffh
NC_003143.1	RefSeq	region	3675244	3675267	.	-	.	ID=id2373;Note=PS00017 ATP%2FGTP-binding site motif A %28P-loop%29.;Dbxref=GeneID:1176112;gbkey=misc_feature;gene=ffh
NC_003143.1	RefSeq	gene	3675649	3676542	.	+	.	ID=gene3177;Name=corE;Dbxref=GeneID:1176113;gbkey=Gene;gene=corE;locus_tag=YPO3297
NC_003143.1	RefSeq	CDS	3675649	3676542	.	+	0	ID=cds3023;Name=YP_002348193.1;Parent=gene3177;Dbxref=InterPro:IPR002541,UniProtKB%2FTrEMBL:Q7CK92,Genbank:YP_002348193.1,GeneID:1176113;gbkey=CDS;gene=corE;product=hypothetical protein;protein_id=YP_002348193.1;transl_table=11
NC_003143.1	RefSeq	gene	3676704	3677894	.	+	.	ID=gene3178;Name=yfjD;Dbxref=GeneID:1176114;gbkey=Gene;gene=yfjD;gene_synonym=yfjD;locus_tag=YPO3298
NC_003143.1	RefSeq	CDS	3676704	3677894	.	+	0	ID=cds3024;Name=YP_002348194.1;Parent=gene3178;Dbxref=InterPro:IPR000644,InterPro:IPR002550,InterPro:IPR005170,UniProtKB%2FTrEMBL:Q7CK93,Genbank:YP_002348194.1,GeneID:1176114;gbkey=CDS;gene=yfjD;product=hypothetical protein;protein_id=YP_002348194.1;transl_table=11
NC_003143.1	RefSeq	repeat_region	3677924	3678635	.	-	.	ID=id2374;Note=Contains a %27A%27 at nucleotide position 315%7EIS200-like insertion sequence:IS1541;gbkey=repeat_region
NC_003143.1	RefSeq	gene	3678032	3678490	.	-	.	ID=gene3179;Name=tnp;Dbxref=GeneID:1176115;gbkey=Gene;gene=tnp;locus_tag=YPO3299
NC_003143.1	RefSeq	CDS	3678032	3678490	.	-	0	ID=cds3025;Name=YP_002348195.1;Parent=gene3179;Dbxref=InterPro:IPR002686,UniProtKB%2FTrEMBL:Q56938,Genbank:YP_002348195.1,GeneID:1176115;gbkey=CDS;gene=tnp;product=transposase for the IS1541 insertion element;protein_id=YP_002348195.1;transl_table=11
NC_003143.1	RefSeq	gene	3678694	3679209	.	-	.	ID=gene3180;Name=luxS;Dbxref=GeneID:1176116;gbkey=Gene;gene=luxS;locus_tag=YPO3300
NC_003143.1	RefSeq	CDS	3678694	3679209	.	-	0	ID=cds3026;Name=YP_002348196.1;Parent=gene3180;Note=catalyzes the hydrolysis of S-ribosylhomocysteine to homocysteine and autoinducer-2;Dbxref=InterPro:IPR003815,Genbank:YP_002348196.1,GeneID:1176116;gbkey=CDS;gene=luxS;product=S-ribosylhomocysteinase;protein_id=YP_002348196.1;transl_table=11
NC_003143.1	RefSeq	gene	3679377	3680936	.	-	.	ID=gene3181;Name=gshA;Dbxref=GeneID:1176117;gbkey=Gene;gene=gshA;gene_synonym=gsh-I,gshA;locus_tag=YPO3301
NC_003143.1	RefSeq	CDS	3679377	3680936	.	-	0	ID=cds3027;Name=YP_002348197.1;Parent=gene3181;Note=involved in the first step of glutathione biosynthesis;Dbxref=InterPro:IPR006334,InterPro:IPR007370,UniProtKB%2FTrEMBL:Q0WBZ1,Genbank:YP_002348197.1,GeneID:1176117;gbkey=CDS;gene=gshA;product=glutamate--cysteine ligase;protein_id=YP_002348197.1;transl_table=11
NC_003143.1	RefSeq	region	3680247	3680270	.	-	.	ID=id2375;Note=PS00030 Eukaryotic  RNA-binding region RNP-1 signature.;Dbxref=GeneID:1176117;gbkey=misc_feature;gene=gshA
NC_003143.1	RefSeq	gene	3681019	3681447	.	-	.	ID=gene3182;Name=yqaA;Dbxref=GeneID:1176118;gbkey=Gene;gene=yqaA;locus_tag=YPO3302
NC_003143.1	RefSeq	CDS	3681019	3681447	.	-	0	ID=cds3028;Name=YP_002348198.1;Parent=gene3182;Dbxref=UniProtKB%2FTrEMBL:Q7CK95,Genbank:YP_002348198.1,GeneID:1176118;gbkey=CDS;gene=yqaA;product=hypothetical protein;protein_id=YP_002348198.1;transl_table=11
NC_003143.1	RefSeq	gene	3681444	3682010	.	-	.	ID=gene3183;Name=yqaB;Dbxref=GeneID:1176119;gbkey=Gene;gene=yqaB;locus_tag=YPO3303
NC_003143.1	RefSeq	CDS	3681444	3682010	.	-	0	ID=cds3029;Name=YP_002348199.1;Parent=gene3183;Note=YqaB%3B catalyzes the dephosphorylation of fructose 1-phosphate%2C 6-phosphogluconate and p-nitrophenyl phosphate %28pNPP%29%3B presents beta-phosphoglucomutase activity at a lower extent;Dbxref=InterPro:IPR005833,InterPro:IPR005834,InterPro:IPR006402,InterPro:IPR010976,UniProtKB%2FTrEMBL:Q7CK96,Genbank:YP_002348199.1,GeneID:1176119;gbkey=CDS;gene=yqaB;product=fructose-1-phosphatase;protein_id=YP_002348199.1;transl_table=11
NC_003143.1	RefSeq	gene	3682605	3682681	.	-	.	ID=gene3184;Name=YPt_47;Dbxref=GeneID:1176120;gbkey=Gene;locus_tag=YPt_47
NC_003143.1	RefSeq	tRNA	3682605	3682681	.	-	.	ID=rna66;Parent=gene3184;Note=tRNA Arg anticodon ACG%2C Cove score 80.38;Dbxref=GeneID:1176120;gbkey=tRNA;product=tRNA-Arg
NC_003143.1	RefSeq	exon	3682605	3682681	.	-	.	ID=id2376;Parent=rna66;Note=tRNA Arg anticodon ACG%2C Cove score 80.38;Dbxref=GeneID:1176120;gbkey=tRNA;product=tRNA-Arg
NC_003143.1	RefSeq	gene	3682739	3682815	.	-	.	ID=gene3185;Name=YPt_48;Dbxref=GeneID:1176121;gbkey=Gene;locus_tag=YPt_48
NC_003143.1	RefSeq	tRNA	3682739	3682815	.	-	.	ID=rna67;Parent=gene3185;Note=tRNA Arg anticodon ACG%2C Cove score 85.08;Dbxref=GeneID:1176121;gbkey=tRNA;product=tRNA-Arg
NC_003143.1	RefSeq	exon	3682739	3682815	.	-	.	ID=id2377;Parent=rna67;Note=tRNA Arg anticodon ACG%2C Cove score 85.08;Dbxref=GeneID:1176121;gbkey=tRNA;product=tRNA-Arg
NC_003143.1	RefSeq	gene	3682824	3682916	.	-	.	ID=gene3186;Name=YPt_49;Dbxref=GeneID:1176122;gbkey=Gene;locus_tag=YPt_49
NC_003143.1	RefSeq	tRNA	3682824	3682916	.	-	.	ID=rna68;Parent=gene3186;Note=tRNA Ser anticodon GCT%2C Cove score 73.90;Dbxref=GeneID:1176122;gbkey=tRNA;product=tRNA-Ser
NC_003143.1	RefSeq	exon	3682824	3682916	.	-	.	ID=id2378;Parent=rna68;Note=tRNA Ser anticodon GCT%2C Cove score 73.90;Dbxref=GeneID:1176122;gbkey=tRNA;product=tRNA-Ser
NC_003143.1	RefSeq	gene	3683279	3683464	.	-	.	ID=gene3187;Name=csrA;Dbxref=GeneID:1176123;gbkey=Gene;gene=csrA;gene_synonym=rsmA,zfiA;locus_tag=YPO3304
NC_003143.1	RefSeq	CDS	3683279	3683464	.	-	0	ID=cds3030;Name=YP_002348200.1;Parent=gene3187;Note=affects carbohydrate metabolism%3B has regulatory role in many processes;Dbxref=InterPro:IPR003751,InterPro:IPR008994,UniProtKB%2FTrEMBL:Q0WBY8,Genbank:YP_002348200.1,GeneID:1176123;gbkey=CDS;gene=csrA;product=carbon storage regulator;protein_id=YP_002348200.1;transl_table=11
NC_003143.1	RefSeq	gene	3683714	3686341	.	-	.	ID=gene3188;Name=alaS;Dbxref=GeneID:1176124;gbkey=Gene;gene=alaS;gene_synonym=lovB;locus_tag=YPO3305
NC_003143.1	RefSeq	CDS	3683714	3686341	.	-	0	ID=cds3031;Name=YP_002348201.1;Parent=gene3188;Note=Catalyzes a two-step reaction%2C first charging an alanyl molecule by linking its carboxyl group to the alpha-phosphate of ATP%2C followed by transfer of the aminoacyl-adenylate to its tRNA;Dbxref=InterPro:IPR002318,InterPro:IPR003156,InterPro:IPR012947,UniProtKB%2FTrEMBL:Q0WBY7,Genbank:YP_002348201.1,GeneID:1176124;gbkey=CDS;gene=alaS;product=alanyl-tRNA synthetase;protein_id=YP_002348201.1;transl_table=11
NC_003143.1	RefSeq	region	3685601	3685630	.	-	.	ID=id2379;Note=PS00339 Aminoacyl-transfer RNA synthetases class-II signature 2.;Dbxref=GeneID:1176124;gbkey=misc_feature;gene=alaS
NC_003143.1	RefSeq	gene	3686481	3687044	.	-	.	ID=gene3189;Name=recX;Dbxref=GeneID:1176125;gbkey=Gene;gene=recX;locus_tag=YPO3306
NC_003143.1	RefSeq	CDS	3686481	3687044	.	-	0	ID=cds3032;Name=YP_002348202.1;Parent=gene3189;Note=binds RecA and inhibits RecA-mediated DNA strand exchange and ATP hydrolysis and coprotease activities;Dbxref=InterPro:IPR003783,UniProtKB%2FTrEMBL:Q0WBY6,Genbank:YP_002348202.1,GeneID:1176125;gbkey=CDS;gene=recX;product=recombination regulator RecX;protein_id=YP_002348202.1;transl_table=11
NC_003143.1	RefSeq	gene	3687182	3688252	.	-	.	ID=gene3190;Name=recA;Dbxref=GeneID:1176126;gbkey=Gene;gene=recA;gene_synonym=recH,rnmB,tif,umuB,zab;locus_tag=YPO3307
NC_003143.1	RefSeq	CDS	3687182	3688252	.	-	0	ID=cds3033;Name=YP_002348203.1;Parent=gene3190;Note=catalyzes the hydrolysis of ATP in the presence of single-stranded DNA%2C the ATP-dependent uptake of single-stranded DNA by duplex DNA%2C and the ATP-dependent hybridization of homologous single-stranded DNAs;Dbxref=InterPro:IPR001553,InterPro:IPR003593,InterPro:IPR013765,UniProtKB%2FTrEMBL:Q0WBY5,Genbank:YP_002348203.1,GeneID:1176126;gbkey=CDS;gene=recA;product=recombinase A;protein_id=YP_002348203.1;transl_table=11
NC_003143.1	RefSeq	region	3687584	3687610	.	-	.	ID=id2380;Note=PS00321 recA signature.;Dbxref=GeneID:1176126;gbkey=misc_feature;gene=recA
NC_003143.1	RefSeq	region	3687983	3688006	.	-	.	ID=id2381;Note=PS00017 ATP%2FGTP-binding site motif A %28P-loop%29.;Dbxref=GeneID:1176126;gbkey=misc_feature;gene=recA
NC_003143.1	RefSeq	region	3688031	3688054	.	-	.	ID=id2382;Note=PS00017 ATP%2FGTP-binding site motif A %28P-loop%29.;Dbxref=GeneID:1176126;gbkey=misc_feature;gene=recA
NC_003143.1	RefSeq	gene	3688367	3688855	.	-	.	ID=gene3191;Name=YPO3308;Dbxref=GeneID:1176127;gbkey=Gene;locus_tag=YPO3308
NC_003143.1	RefSeq	CDS	3688367	3688855	.	-	0	ID=cds3034;Name=YP_002348204.1;Parent=gene3191;Dbxref=InterPro:IPR008136,InterPro:IPR012244,UniProtKB%2FTrEMBL:Q0WBY4,Genbank:YP_002348204.1,GeneID:1176127;gbkey=CDS;product=competence damage-inducible protein A;protein_id=YP_002348204.1;transl_table=11
NC_003143.1	RefSeq	gene	3689172	3690512	.	+	.	ID=gene3192;Name=YPO3309;Dbxref=GeneID:1176128;gbkey=Gene;locus_tag=YPO3309
NC_003143.1	RefSeq	CDS	3689172	3690512	.	+	0	ID=cds3035;Name=YP_002348205.1;Parent=gene3192;Dbxref=InterPro:IPR007114,InterPro:IPR011701,UniProtKB%2FTrEMBL:Q7CK97,Genbank:YP_002348205.1,GeneID:1176128;gbkey=CDS;product=hypothetical protein;protein_id=YP_002348205.1;transl_table=11
NC_003143.1	RefSeq	gene	3690760	3691704	.	+	.	ID=gene3193;Name=YPO3310;Dbxref=GeneID:1176129;gbkey=Gene;locus_tag=YPO3310
NC_003143.1	RefSeq	CDS	3690760	3691704	.	+	0	ID=cds3036;Name=YP_002348206.1;Parent=gene3193;Dbxref=InterPro:IPR007324,InterPro:IPR009057,InterPro:IPR011991,UniProtKB%2FTrEMBL:Q7CK98,Genbank:YP_002348206.1,GeneID:1176129;gbkey=CDS;product=transcriptional regulator;protein_id=YP_002348206.1;transl_table=11
NC_003143.1	RefSeq	region	3690823	3690888	.	+	.	ID=id2383;Note=Predicted helix-turn-helix motif with score 2038 %28%2B6.13 SD%29 at aa 22-43%2C sequence MKQSEIADSLHLSQSFVSRAIT;Dbxref=GeneID:1176129;gbkey=misc_feature
NC_003143.1	RefSeq	gene	3691926	3693350	.	-	.	ID=gene3194;Name=YPO3311;Dbxref=GeneID:1176130;gbkey=Gene;locus_tag=YPO3311
NC_003143.1	RefSeq	CDS	3691926	3693350	.	-	0	ID=cds3037;Name=YP_002348207.1;Parent=gene3194;Dbxref=InterPro:IPR004216,InterPro:IPR009015,UniProtKB%2FTrEMBL:Q7CK99,Genbank:YP_002348207.1,GeneID:1176130;gbkey=CDS;product=hypothetical protein;protein_id=YP_002348207.1;transl_table=11
NC_003143.1	RefSeq	gene	3693371	3694858	.	-	.	ID=gene3195;Name=YPO3312;Dbxref=GeneID:1176131;gbkey=Gene;locus_tag=YPO3312
NC_003143.1	RefSeq	CDS	3693371	3694858	.	-	0	ID=cds3038;Name=YP_002348208.1;Parent=gene3195;Dbxref=InterPro:IPR000577,InterPro:IPR005999,UniProtKB%2FTrEMBL:Q7CKA0,Genbank:YP_002348208.1,GeneID:1176131;gbkey=CDS;product=glycerol kinase;protein_id=YP_002348208.1;transl_table=11
NC_003143.1	RefSeq	region	3693518	3693541	.	-	.	ID=id2384;Note=PS00017 ATP%2FGTP-binding site motif A %28P-loop%29.;Dbxref=GeneID:1176131;gbkey=misc_feature
NC_003143.1	RefSeq	gene	3694861	3695805	.	-	.	ID=gene3196;Name=YPO3313;Dbxref=GeneID:1176132;gbkey=Gene;locus_tag=YPO3313
NC_003143.1	RefSeq	CDS	3694861	3695805	.	-	0	ID=cds3039;Name=YP_002348209.1;Parent=gene3196;Dbxref=InterPro:IPR005475,InterPro:IPR005476,InterPro:IPR009014,InterPro:IPR012068,UniProtKB%2FTrEMBL:Q74XN1,Genbank:YP_002348209.1,GeneID:1176132;gbkey=CDS;product=hypothetical protein;protein_id=YP_002348209.1;transl_table=11
NC_003143.1	RefSeq	gene	3695798	3696628	.	-	.	ID=gene3197;Name=YPO3314;Dbxref=GeneID:1176133;gbkey=Gene;locus_tag=YPO3314
NC_003143.1	RefSeq	CDS	3695798	3696628	.	-	0	ID=cds3040;Name=YP_002348210.1;Parent=gene3197;Dbxref=InterPro:IPR005474,InterPro:IPR012058,UniProtKB%2FTrEMBL:Q74XN2,Genbank:YP_002348210.1,GeneID:1176133;gbkey=CDS;product=hypothetical protein;protein_id=YP_002348210.1;transl_table=11
NC_003143.1	RefSeq	gene	3696884	3698029	.	-	.	ID=gene3198;Name=rbsC;Dbxref=GeneID:1176134;gbkey=Gene;gene=rbsC;locus_tag=YPO3315
NC_003143.1	RefSeq	CDS	3696884	3698029	.	-	0	ID=cds3041;Name=YP_002348211.1;Parent=gene3198;Dbxref=InterPro:IPR001851,UniProtKB%2FTrEMBL:Q7CKA1,Genbank:YP_002348211.1,GeneID:1176134;gbkey=CDS;gene=rbsC;product=sugar ABC transporter permease;protein_id=YP_002348211.1;transl_table=11
NC_003143.1	RefSeq	gene	3698026	3699549	.	-	.	ID=gene3199;Name=rbsC;Dbxref=GeneID:1176135;gbkey=Gene;gene=rbsC;locus_tag=YPO3316
NC_003143.1	RefSeq	CDS	3698026	3699549	.	-	0	ID=cds3042;Name=YP_002348212.1;Parent=gene3199;Dbxref=InterPro:IPR003439,InterPro:IPR003593,InterPro:IPR004087,UniProtKB%2FTrEMBL:Q7CKA2,Genbank:YP_002348212.1,GeneID:1176135;gbkey=CDS;product=sugar ABC transporter ATP-binding protein;protein_id=YP_002348212.1;transl_table=11
NC_003143.1	RefSeq	region	3698287	3698331	.	-	.	ID=id2385;Note=PS00211 ABC transporters family signature.;Dbxref=GeneID:1176135;gbkey=misc_feature
NC_003143.1	RefSeq	region	3699406	3699429	.	-	.	ID=id2386;Note=PS00017 ATP%2FGTP-binding site motif A %28P-loop%29.;Dbxref=GeneID:1176135;gbkey=misc_feature
NC_003143.1	RefSeq	gene	3699549	3700166	.	-	.	ID=gene3200;Name=YPO3317;Dbxref=GeneID:1176136;gbkey=Gene;locus_tag=YPO3317
NC_003143.1	RefSeq	CDS	3699549	3700166	.	-	0	ID=cds3043;Name=YP_002348213.1;Parent=gene3200;Dbxref=UniProtKB%2FTrEMBL:Q9X6A8,Genbank:YP_002348213.1,GeneID:1176136;gbkey=CDS;product=lipoprotein;protein_id=YP_002348213.1;transl_table=11
NC_003143.1	RefSeq	region	3700101	3700133	.	-	.	ID=id2387;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site.;Dbxref=GeneID:1176136;gbkey=misc_feature
NC_003143.1	RefSeq	gene	3700259	3701233	.	-	.	ID=gene3201;Name=YPO3318;Dbxref=GeneID:1176137;gbkey=Gene;locus_tag=YPO3318
NC_003143.1	RefSeq	CDS	3700259	3701233	.	-	0	ID=cds3044;Name=YP_002348214.1;Parent=gene3201;Dbxref=InterPro:IPR001761,UniProtKB%2FTrEMBL:Q9X6A9,Genbank:YP_002348214.1,GeneID:1176137;gbkey=CDS;product=sugar ABC transporter substrate-binding protein;protein_id=YP_002348214.1;transl_table=11
NC_003143.1	RefSeq	gene	3701736	3703949	.	+	.	ID=gene3202;Name=katY;Dbxref=GeneID:1176138;gbkey=Gene;gene=katY;locus_tag=YPO3319
NC_003143.1	RefSeq	CDS	3701736	3703949	.	+	0	ID=cds3045;Name=YP_002348215.1;Parent=gene3202;Dbxref=InterPro:IPR000763,InterPro:IPR002016,InterPro:IPR002048,InterPro:IPR010255,UniProtKB%2FTrEMBL:Q0WBX3,Genbank:YP_002348215.1,GeneID:1176138;gbkey=CDS;gene=katY;product=catalase-peroxidase;protein_id=YP_002348215.1;transl_table=11
NC_003143.1	RefSeq	region	3702015	3702050	.	+	.	ID=id2388;Note=PS00436 Peroxidases active site signature.;Dbxref=GeneID:1176138;gbkey=misc_feature;gene=katY
NC_003143.1	RefSeq	region	3702501	3702533	.	+	.	ID=id2389;Note=PS00435 Peroxidases proximal heme-ligand signature.;Dbxref=GeneID:1176138;gbkey=misc_feature;gene=katY
NC_003143.1	RefSeq	region	3703305	3703343	.	+	.	ID=id2390;Note=PS00018 EF-hand calcium-binding domain.;Dbxref=GeneID:1176138;gbkey=misc_feature;gene=katY
NC_003143.1	RefSeq	gene	3704026	3704409	.	+	.	ID=gene3203;Name=cybC;Dbxref=GeneID:1176139;gbkey=Gene;gene=cybC;locus_tag=YPO3320
NC_003143.1	RefSeq	CDS	3704026	3704409	.	+	0	ID=cds3046;Name=YP_002348216.1;Parent=gene3203;Dbxref=InterPro:IPR009155,InterPro:IPR010980,UniProtKB%2FTrEMBL:Q0WBX2,Genbank:YP_002348216.1,GeneID:1176139;gbkey=CDS;gene=cybC;product=cytochrome B562;protein_id=YP_002348216.1;transl_table=11
NC_003143.1	RefSeq	region	3704047	3704079	.	+	.	ID=id2391;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site.;Dbxref=GeneID:1176139;gbkey=misc_feature;gene=cybC
NC_003143.1	RefSeq	gene	3704557	3705087	.	+	.	ID=gene3204;Name=cybB;Dbxref=GeneID:1176140;gbkey=Gene;gene=cybB;locus_tag=YPO3321
NC_003143.1	RefSeq	CDS	3704557	3705087	.	+	0	ID=cds3047;Name=YP_002348217.1;Parent=gene3204;Note=B-type di-heme cytochrome with a major alpha-absorption peak at 561 nm and a minor peak at 555 nm;Dbxref=InterPro:IPR011577,UniProtKB%2FTrEMBL:Q0WBX1,Genbank:YP_002348217.1,GeneID:1176140;gbkey=CDS;gene=cybB;product=cytochrome b561;protein_id=YP_002348217.1;transl_table=11
NC_003143.1	RefSeq	gene	3705344	3706054	.	-	.	ID=gene3205;Name=YPO3322;Dbxref=GeneID:1176141;gbkey=Gene;locus_tag=YPO3322
NC_003143.1	RefSeq	CDS	3705344	3706054	.	-	0	ID=cds3048;Name=YP_002348218.1;Parent=gene3205;Note=binds to the twin-arginine signal peptides of certain proteins%2C including dimethylsulfoxide reductase and trimethylamine N-oxide reductase that are translocated to the cytoplasmic membrane;Dbxref=InterPro:IPR010395,UniProtKB%2FTrEMBL:Q9X6B3,Genbank:YP_002348218.1,GeneID:1176141;gbkey=CDS;product=twin-argninine leader-binding protein DmsD;protein_id=YP_002348218.1;transl_table=11
NC_003143.1	RefSeq	gene	3706200	3707060	.	-	.	ID=gene3206;Name=dmsC;Dbxref=GeneID:1176142;gbkey=Gene;gene=dmsC;locus_tag=YPO3323
NC_003143.1	RefSeq	CDS	3706200	3707060	.	-	0	ID=cds3049;Name=YP_002348219.1;Parent=gene3206;Dbxref=InterPro:IPR001865,InterPro:IPR007059,UniProtKB%2FTrEMBL:Q9X6B4,Genbank:YP_002348219.1,GeneID:1176142;gbkey=CDS;gene=dmsC;product=anaerobic dimethyl sulfoxide reductase subunit C;protein_id=YP_002348219.1;transl_table=11
NC_003143.1	RefSeq	region	3706860	3706895	.	-	.	ID=id2392;Note=PS00962 Ribosomal protein S2 signature 1.;Dbxref=GeneID:1176142;gbkey=misc_feature;gene=dmsC
NC_003143.1	RefSeq	gene	3707062	3707679	.	-	.	ID=gene3207;Name=dmsB;Dbxref=GeneID:1176143;gbkey=Gene;gene=dmsB;locus_tag=YPO3324
NC_003143.1	RefSeq	CDS	3707062	3707679	.	-	0	ID=cds3050;Name=YP_002348220.1;Parent=gene3207;Dbxref=InterPro:IPR001450,UniProtKB%2FTrEMBL:Q9X6B5,Genbank:YP_002348220.1,GeneID:1176143;gbkey=CDS;gene=dmsB;product=anaerobic dimethyl sulfoxide reductase subunit B;protein_id=YP_002348220.1;transl_table=11
NC_003143.1	RefSeq	region	3707350	3707385	.	-	.	ID=id2393;Note=PS00198 4Fe-4S ferredoxins%2C iron-sulfur binding region signature.;Dbxref=GeneID:1176143;gbkey=misc_feature;gene=dmsB
NC_003143.1	RefSeq	region	3707359	3707376	.	-	.	ID=id2394;Note=PS00190 Cytochrome c family heme-binding site signature.;Dbxref=GeneID:1176143;gbkey=misc_feature;gene=dmsB
NC_003143.1	RefSeq	gene	3707691	3710141	.	-	.	ID=gene3208;Name=dmsA;Dbxref=GeneID:1176144;gbkey=Gene;gene=dmsA;locus_tag=YPO3325
NC_003143.1	RefSeq	CDS	3707691	3710141	.	-	0	ID=cds3051;Name=YP_002348221.1;Parent=gene3208;Dbxref=InterPro:IPR006311,InterPro:IPR006655,InterPro:IPR006656,InterPro:IPR006657,InterPro:IPR006963,InterPro:IPR009010,InterPro:IPR011888,UniProtKB%2FTrEMBL:Q0WBW7,Genbank:YP_002348221.1,GeneID:1176144;gbkey=CDS;gene=dmsA;product=anaerobic dimethyl sulfoxide reductase subunit A;protein_id=YP_002348221.1;transl_table=11
NC_003143.1	RefSeq	region	3707862	3707945	.	-	.	ID=id2395;Note=PS00932 Prokaryotic molybdopterin oxidoreductases signature 3.;Dbxref=GeneID:1176144;gbkey=misc_feature;gene=dmsA
NC_003143.1	RefSeq	region	3708534	3708587	.	-	.	ID=id2396;Note=PS00490 Prokaryotic molybdopterin oxidoreductases signature 2.;Dbxref=GeneID:1176144;gbkey=misc_feature;gene=dmsA
NC_003143.1	RefSeq	region	3709899	3709955	.	-	.	ID=id2397;Note=PS00551 Prokaryotic molybdopterin oxidoreductases signature 1.;Dbxref=GeneID:1176144;gbkey=misc_feature;gene=dmsA
NC_003143.1	RefSeq	gene	3710604	3711299	.	-	.	ID=gene3209;Name=araD;Dbxref=GeneID:1176145;gbkey=Gene;gene=araD;locus_tag=YPO3326
NC_003143.1	RefSeq	CDS	3710604	3711299	.	-	0	ID=cds3052;Name=YP_002348222.1;Parent=gene3209;Note=catalyzes the isomerization of L-ribulose 5-phosphate to D-xylulose 5-phosphate in the anaerobic catabolism of L-ascorbate%3B links the arabinose metabolic pathway to the pentose phosphate pathway and allows the bacteria to use arabinose as an energy source;Dbxref=InterPro:IPR001303,InterPro:IPR004661,UniProtKB%2FTrEMBL:Q0WBW6,Genbank:YP_002348222.1,GeneID:1176145;gbkey=CDS;gene=araD;product=L-ribulose-5-phosphate 4-epimerase;protein_id=YP_002348222.1;transl_table=11
NC_003143.1	RefSeq	gene	3712002	3712811	.	+	.	ID=gene3210;Name=fucR;Dbxref=GeneID:1176146;gbkey=Gene;gene=fucR;locus_tag=YPO3327
NC_003143.1	RefSeq	CDS	3712002	3712811	.	+	0	ID=cds3053;Name=YP_002348223.1;Parent=gene3210;Dbxref=InterPro:IPR001034,UniProtKB%2FTrEMBL:Q7CKA8,Genbank:YP_002348223.1,GeneID:1176146;gbkey=CDS;gene=fucR;product=deoR family regulatory protein;protein_id=YP_002348223.1;transl_table=11
NC_003143.1	RefSeq	region	3712017	3712121	.	+	.	ID=id2398;Note=PS00894 Bacterial regulatory proteins%2C deoR family signature.;Dbxref=GeneID:1176146;gbkey=misc_feature;gene=fucR
NC_003143.1	RefSeq	region	3712536	3712568	.	+	.	ID=id2399;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site.;Dbxref=GeneID:1176146;gbkey=misc_feature;gene=fucR
NC_003143.1	RefSeq	gene	3712873	3713976	.	+	.	ID=gene3211;Name=YPO3328;Dbxref=GeneID:1176147;gbkey=Gene;locus_tag=YPO3328
NC_003143.1	RefSeq	CDS	3712873	3713976	.	+	0	ID=cds3054;Name=YP_002348224.1;Parent=gene3211;Dbxref=UniProtKB%2FTrEMBL:Q7CKA9,Genbank:YP_002348224.1,GeneID:1176147;gbkey=CDS;product=sugar ABC transporter substrate-binding protein;protein_id=YP_002348224.1;transl_table=11
NC_003143.1	RefSeq	repeat_region	3714082	3714793	.	+	.	ID=id2400;Note=Contains a %27G%27 at nucleotide position 315%7EIS200-like insertion sequence:IS1541;gbkey=repeat_region
NC_003143.1	RefSeq	gene	3714227	3714685	.	+	.	ID=gene3212;Name=tnp;Dbxref=GeneID:1176148;gbkey=Gene;gene=tnp;locus_tag=YPO3329
NC_003143.1	RefSeq	CDS	3714227	3714685	.	+	0	ID=cds3055;Name=YP_002348225.1;Parent=gene3212;Dbxref=InterPro:IPR002686,UniProtKB%2FTrEMBL:Q74YM6,Genbank:YP_002348225.1,GeneID:1176148;gbkey=CDS;gene=tnp;product=transposase for the IS1541 insertion element;protein_id=YP_002348225.1;transl_table=11
NC_003143.1	RefSeq	gene	3714836	3716350	.	+	.	ID=gene3213;Name=YPO3330;Dbxref=GeneID:1176149;gbkey=Gene;locus_tag=YPO3330
NC_003143.1	RefSeq	CDS	3714836	3716350	.	+	0	ID=cds3056;Name=YP_002348226.1;Parent=gene3213;Dbxref=InterPro:IPR003439,InterPro:IPR003593,UniProtKB%2FTrEMBL:Q74XP4,Genbank:YP_002348226.1,GeneID:1176149;gbkey=CDS;product=sugar ABC transporter ATP-binding protein;protein_id=YP_002348226.1;transl_table=11
NC_003143.1	RefSeq	region	3714971	3714994	.	+	.	ID=id2401;Note=PS00017 ATP%2FGTP-binding site motif A %28P-loop%29.;Dbxref=GeneID:1176149;gbkey=misc_feature
NC_003143.1	RefSeq	region	3716054	3716098	.	+	.	ID=id2402;Note=PS00211 ABC transporters family signature.;Dbxref=GeneID:1176149;gbkey=misc_feature
NC_003143.1	RefSeq	gene	3716343	3717332	.	+	.	ID=gene3214;Name=YPO3331;Dbxref=GeneID:1176150;gbkey=Gene;locus_tag=YPO3331
NC_003143.1	RefSeq	CDS	3716343	3717332	.	+	0	ID=cds3057;Name=YP_002348227.1;Parent=gene3214;Dbxref=InterPro:IPR001851,UniProtKB%2FTrEMBL:Q7CKB1,Genbank:YP_002348227.1,GeneID:1176150;gbkey=CDS;product=sugar ABC transporter permease;protein_id=YP_002348227.1;transl_table=11
NC_003143.1	RefSeq	gene	3717345	3718382	.	+	.	ID=gene3215;Name=YPO3332;Dbxref=GeneID:1176151;gbkey=Gene;locus_tag=YPO3332
NC_003143.1	RefSeq	CDS	3717345	3718382	.	+	0	ID=cds3058;Name=YP_002348228.1;Parent=gene3215;Dbxref=InterPro:IPR001851,UniProtKB%2FTrEMBL:Q7CKB2,Genbank:YP_002348228.1,GeneID:1176151;gbkey=CDS;product=sugar ABC transporter permease;protein_id=YP_002348228.1;transl_table=11
NC_003143.1	RefSeq	region	3717921	3717944	.	+	.	ID=id2403;Note=PS00017 ATP%2FGTP-binding site motif A %28P-loop%29.;Dbxref=GeneID:1176151;gbkey=misc_feature
NC_003143.1	RefSeq	gene	3718588	3719469	.	+	.	ID=gene3216;Name=sgbU;Dbxref=GeneID:1176152;gbkey=Gene;gene=sgbU;locus_tag=YPO3333
NC_003143.1	RefSeq	CDS	3718588	3719469	.	+	0	ID=cds3059;Name=YP_002348229.1;Parent=gene3216;Note=L-xylulose 5-phosphate 3-epimerase activity not yet demonstrated%3B may be involved in the utilization of 2%2C3-diketo-L-gulonate;Dbxref=InterPro:IPR004560,InterPro:IPR012307,UniProtKB%2FTrEMBL:Q7CKB3,Genbank:YP_002348229.1,GeneID:1176152;gbkey=CDS;gene=sgbU;product=L-xylulose 5-phosphate 3-epimerase;protein_id=YP_002348229.1;transl_table=11
NC_003143.1	RefSeq	gene	3719480	3720976	.	+	.	ID=gene3217;Name=lyx;Dbxref=GeneID:1176153;gbkey=Gene;gene=lyx;gene_synonym=lyxK,sgbK,xylK;locus_tag=YPO3334
NC_003143.1	RefSeq	CDS	3719480	3720976	.	+	0	ID=cds3060;Name=YP_002348230.1;Parent=gene3217;Dbxref=InterPro:IPR000577,UniProtKB%2FTrEMBL:Q7CKB4,Genbank:YP_002348230.1,GeneID:1176153;gbkey=CDS;gene=lyx;product=L-xylulose kinase;protein_id=YP_002348230.1;transl_table=11
NC_003143.1	RefSeq	region	3720563	3720625	.	+	.	ID=id2404;Note=PS00445 FGGY family of carbohydrate kinases signature 2.;Dbxref=GeneID:1176153;gbkey=misc_feature;gene=lyx
NC_003143.1	RefSeq	gene	3721374	3723017	.	+	.	ID=gene3218;Name=fumA;Dbxref=GeneID:1176154;gbkey=Gene;gene=fumA;gene_synonym=fumB;locus_tag=YPO3335
NC_003143.1	RefSeq	CDS	3721374	3723017	.	+	0	ID=cds3061;Name=YP_002348231.1;Parent=gene3218;Dbxref=InterPro:IPR000362,InterPro:IPR004646,InterPro:IPR004647,InterPro:IPR011167,UniProtKB%2FTrEMBL:Q7CKB5,Genbank:YP_002348231.1,GeneID:1176154;gbkey=CDS;gene=fumA;product=fumarate hydratase%2C class I;protein_id=YP_002348231.1;transl_table=11
NC_003143.1	RefSeq	region	3722295	3722327	.	+	.	ID=id2405;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site.;Dbxref=GeneID:1176154;gbkey=misc_feature;gene=fumA
NC_003143.1	RefSeq	region	3722739	3722768	.	+	.	ID=id2406;Note=PS00163 Fumarate lyases signature.;Dbxref=GeneID:1176154;gbkey=misc_feature;gene=fumA
NC_003143.1	RefSeq	gene	3723146	3723451	.	+	.	ID=gene3219;Name=YPO3336;Dbxref=GeneID:1176155;gbkey=Gene;locus_tag=YPO3336
NC_003143.1	RefSeq	CDS	3723146	3723451	.	+	0	ID=cds3062;Name=YP_002348232.1;Parent=gene3219;Dbxref=UniProtKB%2FTrEMBL:Q7CKB6,Genbank:YP_002348232.1,GeneID:1176155;gbkey=CDS;product=hypothetical protein;protein_id=YP_002348232.1;transl_table=11
NC_003143.1	RefSeq	gene	3723448	3724233	.	+	.	ID=gene3220;Name=map;Dbxref=GeneID:1176156;gbkey=Gene;gene=map;locus_tag=YPO3337
NC_003143.1	RefSeq	CDS	3723448	3724233	.	+	0	ID=cds3063;Name=YP_002348233.1;Parent=gene3220;Dbxref=InterPro:IPR000994,InterPro:IPR001714,InterPro:IPR002467,UniProtKB%2FTrEMBL:Q7CKB7,Genbank:YP_002348233.1,GeneID:1176156;gbkey=CDS;gene=map;product=methionine aminopeptidase;protein_id=YP_002348233.1;transl_table=11
NC_003143.1	RefSeq	region	3723949	3724005	.	+	.	ID=id2407;Note=PS00680 Methionine aminopeptidase subfamily 1 signature.;Dbxref=GeneID:1176156;gbkey=misc_feature;gene=map
NC_003143.1	RefSeq	gene	3724591	3725778	.	-	.	ID=gene3221;Name=YPO3339;Dbxref=GeneID:1176157;gbkey=Gene;locus_tag=YPO3339
NC_003143.1	RefSeq	CDS	3724591	3725778	.	-	0	ID=cds3064;Name=YP_002348234.1;Parent=gene3221;Dbxref=InterPro:IPR012927,UniProtKB%2FTrEMBL:Q7CKB8,Genbank:YP_002348234.1,GeneID:1176157;gbkey=CDS;product=hypothetical protein;protein_id=YP_002348234.1;transl_table=11
NC_003143.1	RefSeq	gene	3726211	3728307	.	-	.	ID=gene3222;Name=YPO3340;Dbxref=GeneID:1176158;gbkey=Gene;locus_tag=YPO3340;pseudo=true
NC_003143.1	RefSeq	region	3726211	3728307	.	-	.	ID=id2408;Note=Similar to Escherichia coli exogenous ferric siderophore receptor R4 TR:O87518 %28EMBL:AF081285%29 %28669 aa%29 fasta scores: E%28%29: 0%2C 56.4%25 id in 674 aa%2C and to Escherichia coli O157:H7 adhesin Iha TR:Q9LAP1 %28EMBL:AF126104%29 %28696 aa%29 fasta scores: E%28%29: 0%2C 56.4%25 id in 674 aa. This CDS contains a stop codon at position 528. The sequence has been checked and is believed to be correct;Dbxref=GeneID:1176158;gbkey=misc_feature;pseudo=true
NC_003143.1	RefSeq	region	3727903	3727932	.	-	.	ID=id2409;Note=PS00339 Aminoacyl-transfer RNA synthetases class-II signature 2.;Dbxref=GeneID:1176158;gbkey=misc_feature
NC_003143.1	RefSeq	gene	3728426	3728731	.	+	.	ID=gene3223;Name=YPO3341a;Dbxref=GeneID:16744773;gbkey=Gene;locus_tag=YPO3341a
NC_003143.1	RefSeq	CDS	3728426	3728731	.	+	0	ID=cds3065;Name=YP_008479725.1;Parent=gene3223;Dbxref=Genbank:YP_008479725.1,GeneID:16744773;gbkey=CDS;product=hypothetical protein;protein_id=YP_008479725.1;transl_table=11
NC_003143.1	RefSeq	gene	3728968	3730347	.	+	.	ID=gene3224;Name=yhjA;Dbxref=GeneID:1176159;gbkey=Gene;gene=yhjA;locus_tag=YPO3342
NC_003143.1	RefSeq	CDS	3728968	3730347	.	+	0	ID=cds3066;Name=YP_002348235.1;Parent=gene3224;Dbxref=InterPro:IPR004852,InterPro:IPR009056,InterPro:IPR011031,InterPro:IPR012282,UniProtKB%2FTrEMBL:Q7CKB9,Genbank:YP_002348235.1,GeneID:1176159;gbkey=CDS;gene=yhjA;product=cytochrome C peroxidase;protein_id=YP_002348235.1;transl_table=11
NC_003143.1	RefSeq	region	3728980	3729048	.	+	.	ID=id2410;Note=1 probable transmembrane helix predicted;Dbxref=GeneID:1176159;gbkey=misc_feature;gene=yhjA
NC_003143.1	RefSeq	region	3729130	3729147	.	+	.	ID=id2411;Note=PS00190 Cytochrome c family heme-binding site signature.;Dbxref=GeneID:1176159;gbkey=misc_feature;gene=yhjA
NC_003143.1	RefSeq	region	3729571	3729588	.	+	.	ID=id2412;Note=PS00190 Cytochrome c family heme-binding site signature.;Dbxref=GeneID:1176159;gbkey=misc_feature;gene=yhjA
NC_003143.1	RefSeq	region	3730003	3730020	.	+	.	ID=id2413;Note=PS00190 Cytochrome c family heme-binding site signature.;Dbxref=GeneID:1176159;gbkey=misc_feature;gene=yhjA
NC_003143.1	RefSeq	gene	3730412	3731182	.	+	.	ID=gene3225;Name=YPO3343;Dbxref=GeneID:1176160;gbkey=Gene;locus_tag=YPO3343
NC_003143.1	RefSeq	CDS	3730412	3731182	.	+	0	ID=cds3067;Name=YP_002348236.1;Parent=gene3225;Dbxref=InterPro:IPR001638,UniProtKB%2FTrEMBL:Q7CKC0,Genbank:YP_002348236.1,GeneID:1176160;gbkey=CDS;product=ABC transporter substrate-binding protein;protein_id=YP_002348236.1;transl_table=11
NC_003143.1	RefSeq	gene	3731603	3731809	.	+	.	ID=gene3226;Name=YPO3344;Dbxref=GeneID:1176161;gbkey=Gene;locus_tag=YPO3344
NC_003143.1	RefSeq	CDS	3731603	3731809	.	+	0	ID=cds3068;Name=YP_002348237.1;Parent=gene3226;Dbxref=UniProtKB%2FTrEMBL:Q7CKC1,Genbank:YP_002348237.1,GeneID:1176161;gbkey=CDS;product=hypothetical protein;protein_id=YP_002348237.1;transl_table=11
NC_003143.1	RefSeq	gene	3732005	3732283	.	+	.	ID=gene3227;Name=YPO3345;Dbxref=GeneID:1176162;gbkey=Gene;locus_tag=YPO3345
NC_003143.1	RefSeq	CDS	3732005	3732283	.	+	0	ID=cds3069;Name=YP_002348238.1;Parent=gene3227;Note=no significant database hits;Dbxref=UniProtKB%2FTrEMBL:Q74XQ9,Genbank:YP_002348238.1,GeneID:1176162;gbkey=CDS;product=hypothetical protein;protein_id=YP_002348238.1;transl_table=11
NC_003143.1	RefSeq	gene	3732530	3732871	.	+	.	ID=gene3228;Name=arsR;Dbxref=GeneID:1176163;gbkey=Gene;gene=arsR;locus_tag=YPO3346
NC_003143.1	RefSeq	CDS	3732530	3732871	.	+	0	ID=cds3070;Name=YP_002348239.1;Parent=gene3228;Note=regulates the expression of of the arsRBC involved in resistance to arsenic;Dbxref=InterPro:IPR001845,InterPro:IPR011991,UniProtKB%2FTrEMBL:Q7CKC2,Genbank:YP_002348239.1,GeneID:1176163;gbkey=CDS;gene=arsR;product=DNA-binding transcriptional repressor ArsR;protein_id=YP_002348239.1;transl_table=11
NC_003143.1	RefSeq	region	3732620	3732685	.	+	.	ID=id2414;Note=Predicted helix-turn-helix motif with score 1009 %28%2B2.62 SD%29 at aa 31-52%2C sequence LCVCELCHRLNEAQPKISRHLA;Dbxref=GeneID:1176163;gbkey=misc_feature;gene=arsR
NC_003143.1	RefSeq	region	3732629	3732646	.	+	.	ID=id2415;Note=PS00190 Cytochrome c family heme-binding site signature.;Dbxref=GeneID:1176163;gbkey=misc_feature;gene=arsR
NC_003143.1	RefSeq	gene	3732956	3734245	.	+	.	ID=gene3229;Name=arsB;Dbxref=GeneID:1176164;gbkey=Gene;gene=arsB;gene_synonym=arsF;locus_tag=YPO3347
NC_003143.1	RefSeq	CDS	3732956	3734245	.	+	0	ID=cds3071;Name=YP_002348240.1;Parent=gene3229;Dbxref=InterPro:IPR000802,UniProtKB%2FTrEMBL:Q7CKC3,Genbank:YP_002348240.1,GeneID:1176164;gbkey=CDS;gene=arsB;product=arsenical pump membrane protein;protein_id=YP_002348240.1;transl_table=11
NC_003143.1	RefSeq	gene	3734812	3735771	.	+	.	ID=gene3230;Name=YPO3348;Dbxref=GeneID:1176165;gbkey=Gene;locus_tag=YPO3348
NC_003143.1	RefSeq	CDS	3734812	3735771	.	+	0	ID=cds3072;Name=YP_002348241.1;Parent=gene3230;Dbxref=InterPro:IPR007324,InterPro:IPR011991,UniProtKB%2FTrEMBL:Q74XR2,Genbank:YP_002348241.1,GeneID:1176165;gbkey=CDS;product=transcriptional regulator;protein_id=YP_002348241.1;transl_table=11
NC_003143.1	RefSeq	region	3734872	3734937	.	+	.	ID=id2416;Note=Predicted helix-turn-helix motif with score 1954 %28%2B5.84 SD%29 at aa 21-42%2C sequence MTQEEIAHKFGISRIKVGRLLK;Dbxref=GeneID:1176165;gbkey=misc_feature
NC_003143.1	RefSeq	gene	3735892	3736566	.	-	.	ID=gene3231;Name=YPO3349;Dbxref=GeneID:1176166;gbkey=Gene;locus_tag=YPO3349
NC_003143.1	RefSeq	CDS	3735892	3736566	.	-	0	ID=cds3073;Name=YP_002348242.1;Parent=gene3231;Dbxref=InterPro:IPR004007,InterPro:IPR012737,UniProtKB%2FTrEMBL:Q7CKC4,Genbank:YP_002348242.1,GeneID:1176166;gbkey=CDS;product=hypothetical protein;protein_id=YP_002348242.1;transl_table=11
NC_003143.1	RefSeq	gene	3736573	3737574	.	-	.	ID=gene3232;Name=dhaK;Dbxref=GeneID:1176167;gbkey=Gene;gene=dhaK;gene_synonym=ycgT;locus_tag=YPO3350
NC_003143.1	RefSeq	CDS	3736573	3737574	.	-	0	ID=cds3074;Name=YP_002348243.1;Parent=gene3232;Dbxref=InterPro:IPR004006,UniProtKB%2FTrEMBL:Q0WBU5,Genbank:YP_002348243.1,GeneID:1176167;gbkey=CDS;gene=dhaK;product=dihydroxyacetone kinase;protein_id=YP_002348243.1;transl_table=11
NC_003143.1	RefSeq	gene	3737661	3738431	.	-	.	ID=gene3233;Name=YPO3351;Dbxref=GeneID:1176168;gbkey=Gene;locus_tag=YPO3351
NC_003143.1	RefSeq	CDS	3737661	3738431	.	-	0	ID=cds3075;Name=YP_002348244.1;Parent=gene3233;Dbxref=InterPro:IPR002198,InterPro:IPR002347,UniProtKB%2FTrEMBL:Q7CKC5,Genbank:YP_002348244.1,GeneID:1176168;gbkey=CDS;product=short chain dehydrogenase;protein_id=YP_002348244.1;transl_table=11
NC_003143.1	RefSeq	region	3737901	3737987	.	-	.	ID=id2417;Note=PS00061 Short-chain dehydrogenases%2Freductases family signature.;Dbxref=GeneID:1176168;gbkey=misc_feature
NC_003143.1	RefSeq	gene	3738495	3739610	.	-	.	ID=gene3234;Name=ydjJ;Dbxref=GeneID:1176169;gbkey=Gene;gene=ydjJ;locus_tag=YPO3352
NC_003143.1	RefSeq	CDS	3738495	3739610	.	-	0	ID=cds3076;Name=YP_002348245.1;Parent=gene3234;Dbxref=InterPro:IPR002085,InterPro:IPR002328,InterPro:IPR011032,InterPro:IPR011597,InterPro:IPR013149,InterPro:IPR013154,UniProtKB%2FTrEMBL:Q0WBU3,Genbank:YP_002348245.1,GeneID:1176169;gbkey=CDS;gene=ydjJ;product=zinc-binding dehydrogenase;protein_id=YP_002348245.1;transl_table=11
NC_003143.1	RefSeq	region	3739314	3739358	.	-	.	ID=id2418;Note=PS00059 Zinc-containing alcohol dehydrogenases signature.;Dbxref=GeneID:1176169;gbkey=misc_feature;gene=ydjJ
NC_003143.1	RefSeq	gene	3740093	3740548	.	+	.	ID=gene3235;Name=rpiB;Dbxref=GeneID:1176170;gbkey=Gene;gene=rpiB;locus_tag=YPO3353
NC_003143.1	RefSeq	CDS	3740093	3740548	.	+	0	ID=cds3077;Name=YP_002348246.1;Parent=gene3235;Note=catalyzes the interconversion of ribose 5-phosphate to ribulose 5-phosphate%3B enzyme from E. coli shows allose 6-phosphate isomerase activity;Dbxref=InterPro:IPR003500,InterPro:IPR004785,UniProtKB%2FTrEMBL:Q7CKC6,Genbank:YP_002348246.1,GeneID:1176170;gbkey=CDS;gene=rpiB;product=ribose-5-phosphate isomerase B;protein_id=YP_002348246.1;transl_table=11
NC_003143.1	RefSeq	gene	3741342	3743897	.	+	.	ID=gene3236;Name=mutS;Dbxref=GeneID:1176171;gbkey=Gene;gene=mutS;locus_tag=YPO3354
NC_003143.1	RefSeq	CDS	3741342	3743897	.	+	0	ID=cds3078;Name=YP_002348247.1;Parent=gene3236;Note=This protein performs the mismatch recognition step during the DNA repair process;Dbxref=InterPro:IPR000432,InterPro:IPR005748,InterPro:IPR007695,InterPro:IPR007696,InterPro:IPR007860,InterPro:IPR007861,UniProtKB%2FTrEMBL:Q0WBU1,Genbank:YP_002348247.1,GeneID:1176171;gbkey=CDS;gene=mutS;product=DNA mismatch repair protein MutS;protein_id=YP_002348247.1;transl_table=11
NC_003143.1	RefSeq	region	3741762	3741785	.	+	.	ID=id2419;Note=PS00030 Eukaryotic  RNA-binding region RNP-1 signature.;Dbxref=GeneID:1176171;gbkey=misc_feature;gene=mutS
NC_003143.1	RefSeq	region	3743181	3743204	.	+	.	ID=id2420;Note=PS00017 ATP%2FGTP-binding site motif A %28P-loop%29.;Dbxref=GeneID:1176171;gbkey=misc_feature;gene=mutS
NC_003143.1	RefSeq	region	3743403	3743453	.	+	.	ID=id2421;Note=PS00486 DNA mismatch repair proteins mutS family signature.;Dbxref=GeneID:1176171;gbkey=misc_feature;gene=mutS
NC_003143.1	RefSeq	gene	3744225	3745223	.	-	.	ID=gene3237;Name=rpoS;Dbxref=GeneID:1176172;gbkey=Gene;gene=rpoS;gene_synonym=katF,nur,otsX,rpoS,sigS;locus_tag=YPO3355
NC_003143.1	RefSeq	CDS	3744225	3745223	.	-	0	ID=cds3079;Name=YP_002348248.1;Parent=gene3237;Note=sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released%3B this sigma factor controls a regulon of genes required for protection against external stresses;Dbxref=InterPro:IPR000943,InterPro:IPR007624,InterPro:IPR007627,InterPro:IPR007630,InterPro:IPR009042,InterPro:IPR012675,InterPro:IPR012761,InterPro:IPR013324,InterPro:IPR013325,UniProtKB%2FTrEMBL:Q7CKC7,Genbank:YP_002348248.1,GeneID:1176172;gbkey=CDS;gene=rpoS;product=RNA polymerase sigma factor RpoS;protein_id=YP_002348248.1;transl_table=11
NC_003143.1	RefSeq	region	3744279	3744359	.	-	.	ID=id2422;Note=PS00716 Sigma-70 factors family signature 2.;Dbxref=GeneID:1176172;gbkey=misc_feature;gene=rpoS
NC_003143.1	RefSeq	region	3744297	3744362	.	-	.	ID=id2423;Note=Predicted helix-turn-helix motif with score 1306 %28%2B3.64 SD%29 at aa 288-309%2C sequence ATLEDVGREIGLTRERVRQIQV;Dbxref=GeneID:1176172;gbkey=misc_feature;gene=rpoS
NC_003143.1	RefSeq	region	3744825	3744866	.	-	.	ID=id2424;Note=PS00715 Sigma-70 factors family signature 1.;Dbxref=GeneID:1176172;gbkey=misc_feature;gene=rpoS
NC_003143.1	RefSeq	gene	3745278	3746279	.	-	.	ID=gene3238;Name=nlpD;Dbxref=GeneID:1176173;gbkey=Gene;gene=nlpD;locus_tag=YPO3356
NC_003143.1	RefSeq	CDS	3745278	3746279	.	-	0	ID=cds3080;Name=YP_002348249.1;Parent=gene3238;Note=outer membrane lipoprotein involved in stationary-phase cell survival%3B similar to LppB virulence determinant from Haemophilus somnus;Dbxref=InterPro:IPR002482,InterPro:IPR002886,InterPro:IPR011055,UniProtKB%2FTrEMBL:Q7CKC8,Genbank:YP_002348249.1,GeneID:1176173;gbkey=CDS;gene=nlpD;product=lipoprotein NlpD;protein_id=YP_002348249.1;transl_table=11
NC_003143.1	RefSeq	region	3746202	3746234	.	-	.	ID=id2425;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site.;Dbxref=GeneID:1176173;gbkey=misc_feature;gene=nlpD
NC_003143.1	RefSeq	gene	3746383	3747009	.	-	.	ID=gene3239;Name=pcm;Dbxref=GeneID:1176174;gbkey=Gene;gene=pcm;locus_tag=YPO3357
NC_003143.1	RefSeq	CDS	3746383	3747009	.	-	0	ID=cds3081;Name=YP_002348250.1;Parent=gene3239;Note=catalyzes the methyl esterification of L-isoaspartyl residues that are formed in damaged proteins;Dbxref=InterPro:IPR000682,UniProtKB%2FTrEMBL:Q0WBT8,Genbank:YP_002348250.1,GeneID:1176174;gbkey=CDS;gene=pcm;product=protein-L-isoaspartate O-methyltransferase;protein_id=YP_002348250.1;transl_table=11
NC_003143.1	RefSeq	region	3746683	3746712	.	-	.	ID=id2426;Note=PS00339 Aminoacyl-transfer RNA synthetases class-II signature 2.;Dbxref=GeneID:1176174;gbkey=misc_feature;gene=pcm
NC_003143.1	RefSeq	gene	3747003	3747767	.	-	.	ID=gene3240;Name=surE;Dbxref=GeneID:1176175;gbkey=Gene;gene=surE;locus_tag=YPO3358
NC_003143.1	RefSeq	CDS	3747003	3747767	.	-	0	ID=cds3082;Name=YP_002348251.1;Parent=gene3240;Note=catalyzes the conversion of a phosphate monoester to an alcohol and a phosphate;Dbxref=InterPro:IPR002828,UniProtKB%2FTrEMBL:Q0WBT7,Genbank:YP_002348251.1,GeneID:1176175;gbkey=CDS;gene=surE;product=stationary phase survival protein SurE;protein_id=YP_002348251.1;transl_table=11
NC_003143.1	RefSeq	gene	3747745	3748794	.	-	.	ID=gene3241;Name=truD;Dbxref=GeneID:1176176;gbkey=Gene;gene=truD;locus_tag=YPO3359
NC_003143.1	RefSeq	CDS	3747745	3748794	.	-	0	ID=cds3083;Name=YP_002348252.1;Parent=gene3241;Note=catalyzes the modification of U13 in tRNA%28Glu%29;Dbxref=InterPro:IPR001656,InterPro:IPR011760,UniProtKB%2FTrEMBL:Q0WBT6,Genbank:YP_002348252.1,GeneID:1176176;gbkey=CDS;gene=truD;product=tRNA pseudouridine synthase D;protein_id=YP_002348252.1;transl_table=11
NC_003143.1	RefSeq	region	3748528	3748569	.	-	.	ID=id2427;Note=PS01268 Uncharacterized protein family UPF0024 signature.;Dbxref=GeneID:1176176;gbkey=misc_feature;gene=truD
NC_003143.1	RefSeq	gene	3748805	3749293	.	-	.	ID=gene3242;Name=ispF;Dbxref=GeneID:1176177;gbkey=Gene;gene=ispF;gene_synonym=mecS;locus_tag=YPO3360
NC_003143.1	RefSeq	CDS	3748805	3749293	.	-	0	ID=cds3084;Name=YP_002348253.1;Parent=gene3242;Note=catalyzes the conversion of 4-diphosphocytidyl-2-C-methyl-D-erythritol 2-phosphate into 2-C-methyl-D-erythritol 2%2C4-cyclodiphosphate;Dbxref=InterPro:IPR003526,InterPro:IPR010925,UniProtKB%2FTrEMBL:Q0WBT5,Genbank:YP_002348253.1,GeneID:1176177;gbkey=CDS;gene=ispF;product=2-C-methyl-D-erythritol 2%2C4-cyclodiphosphate synthase;protein_id=YP_002348253.1;transl_table=11
NC_003143.1	RefSeq	gene	3749432	3750157	.	-	.	ID=gene3243;Name=ispD;Dbxref=GeneID:1176178;gbkey=Gene;gene=ispD;locus_tag=YPO3361
NC_003143.1	RefSeq	CDS	3749432	3750157	.	-	0	ID=cds3085;Name=YP_002348254.1;Parent=gene3243;Note=4-diphosphocytidyl-2C-methyl-D-erythritol synthase%3B MEP cytidylyltransferase%3B MCT%3B catalyzes the formation of 4-diphosphocytidyl-2-C-methyl-D-erythritol from CTP and 2-C-methyl-D-erythritol 4-phosphate%3B involved in isoprenoid and isopentenyl-PP biosynthesis%3B forms homodimers;Dbxref=InterPro:IPR001228,InterPro:IPR008233,UniProtKB%2FTrEMBL:Q0WBT4,Genbank:YP_002348254.1,GeneID:1176178;gbkey=CDS;gene=ispD;product=2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase;protein_id=YP_002348254.1;transl_table=11
NC_003143.1	RefSeq	region	3749822	3749845	.	-	.	ID=id2428;Note=PS01295 Uncharacterized protein family UPF0007 signature.;Dbxref=GeneID:1176178;gbkey=misc_feature;gene=ispD
NC_003143.1	RefSeq	gene	3750161	3750481	.	-	.	ID=gene3244;Name=ftsB;Dbxref=GeneID:1176179;gbkey=Gene;gene=ftsB;locus_tag=YPO3362
NC_003143.1	RefSeq	CDS	3750161	3750481	.	-	0	ID=cds3086;Name=YP_002348255.1;Parent=gene3244;Note=forms a complex with FtsL and FtsQ%3B colocalizes to the septal region of the dividing cell%3B membrane protein;Dbxref=InterPro:IPR007060,UniProtKB%2FTrEMBL:Q0WBT3,Genbank:YP_002348255.1,GeneID:1176179;gbkey=CDS;gene=ftsB;product=cell division protein FtsB;protein_id=YP_002348255.1;transl_table=11
NC_003143.1	RefSeq	gene	3750795	3751112	.	-	.	ID=gene3245;Name=ygbE;Dbxref=GeneID:1176180;gbkey=Gene;gene=ygbE;locus_tag=YPO3363
NC_003143.1	RefSeq	CDS	3750795	3751112	.	-	0	ID=cds3087;Name=YP_002348256.1;Parent=gene3245;Dbxref=UniProtKB%2FTrEMBL:Q0WBT2,Genbank:YP_002348256.1,GeneID:1176180;gbkey=CDS;gene=ygbE;product=hypothetical protein;protein_id=YP_002348256.1;transl_table=11
NC_003143.1	RefSeq	gene	3751303	3751944	.	-	.	ID=gene3246;Name=cysC;Dbxref=GeneID:1176181;gbkey=Gene;gene=cysC;locus_tag=YPO3364
NC_003143.1	RefSeq	CDS	3751303	3751944	.	-	0	ID=cds3088;Name=YP_002348257.1;Parent=gene3246;Note=converts ATP and adenylyl sulfate to ADP and 3%27-phosphoadenylyl sulfate%3B in Escherichia coli this enzyme functions in cysteine biosynthesis;Dbxref=InterPro:IPR002891,UniProtKB%2FTrEMBL:Q0WBT1,Genbank:YP_002348257.1,GeneID:1176181;gbkey=CDS;gene=cysC;product=adenylylsulfate kinase;protein_id=YP_002348257.1;transl_table=11
NC_003143.1	RefSeq	region	3751783	3751806	.	-	.	ID=id2429;Note=PS00017 ATP%2FGTP-binding site motif A %28P-loop%29.;Dbxref=GeneID:1176181;gbkey=misc_feature;gene=cysC
NC_003143.1	RefSeq	gene	3751946	3753382	.	-	.	ID=gene3247;Name=cysN;Dbxref=GeneID:1176182;gbkey=Gene;gene=cysN;locus_tag=YPO3365
NC_003143.1	RefSeq	CDS	3751946	3753382	.	-	0	ID=cds3089;Name=YP_002348258.1;Parent=gene3247;Note=may be GTPase that regulates ATP sulfurylase activity that is involved in converting ATP and sulfate to diphosphate and adenylylsulfate%3B in Escherichia coli this enzyme functions in cysteine biosynthesis in the first step%3B forms a heterodimer with CysD%3B part of the GTP-binding elongation factor family CysN%2FNodQ;Dbxref=InterPro:IPR000795,InterPro:IPR004161,InterPro:IPR005225,InterPro:IPR009000,InterPro:IPR009001,InterPro:IPR011779,UniProtKB%2FTrEMBL:Q0WBT0,Genbank:YP_002348258.1,GeneID:1176182;gbkey=CDS;gene=cysN;product=sulfate adenylyltransferase subunit 1;protein_id=YP_002348258.1;transl_table=11
NC_003143.1	RefSeq	region	3753080	3753127	.	-	.	ID=id2430;Note=PS00301 GTP-binding elongation factors signature.;Dbxref=GeneID:1176182;gbkey=misc_feature;gene=cysN
NC_003143.1	RefSeq	region	3753251	3753274	.	-	.	ID=id2431;Note=PS00017 ATP%2FGTP-binding site motif A %28P-loop%29.;Dbxref=GeneID:1176182;gbkey=misc_feature;gene=cysN
NC_003143.1	RefSeq	gene	3753475	3754383	.	-	.	ID=gene3248;Name=cysD;Dbxref=GeneID:1176183;gbkey=Gene;gene=cysD;locus_tag=YPO3366
NC_003143.1	RefSeq	CDS	3753475	3754383	.	-	0	ID=cds3090;Name=YP_002348259.1;Parent=gene3248;Note=with CysN catalyzes the formation of adenylylsulfate from sulfate and ATP;Dbxref=InterPro:IPR002500,InterPro:IPR011784,UniProtKB%2FTrEMBL:Q0WBS9,Genbank:YP_002348259.1,GeneID:1176183;gbkey=CDS;gene=cysD;product=sulfate adenylyltransferase subunit 2;protein_id=YP_002348259.1;transl_table=11
NC_003143.1	RefSeq	gene	3754394	3755812	.	-	.	ID=gene3249;Name=cysG;Dbxref=GeneID:1176184;gbkey=Gene;gene=cysG;locus_tag=YPO3367
NC_003143.1	RefSeq	CDS	3754394	3755812	.	-	0	ID=cds3091;Name=YP_002348260.1;Parent=gene3249;Dbxref=InterPro:IPR000878,InterPro:IPR003043,InterPro:IPR006366,InterPro:IPR006367,InterPro:IPR012409,UniProtKB%2FTrEMBL:Q0WBS8,Genbank:YP_002348260.1,GeneID:1176184;gbkey=CDS;gene=cysG;product=siroheme synthase;protein_id=YP_002348260.1;transl_table=11
NC_003143.1	RefSeq	region	3754829	3754930	.	-	.	ID=id2432;Note=PS00840 Uroporphyrin-III C-methyltransferase signature 2.;Dbxref=GeneID:1176184;gbkey=misc_feature;gene=cysG
NC_003143.1	RefSeq	region	3755111	3755155	.	-	.	ID=id2433;Note=PS00839 Uroporphyrin-III C-methyltransferase signature 1.;Dbxref=GeneID:1176184;gbkey=misc_feature;gene=cysG
NC_003143.1	RefSeq	gene	3756113	3756379	.	-	.	ID=gene3250;Name=YPO3368;Dbxref=GeneID:1176185;gbkey=Gene;locus_tag=YPO3368
NC_003143.1	RefSeq	CDS	3756113	3756379	.	-	0	ID=cds3092;Name=YP_002348261.1;Parent=gene3250;Note=no significant database matches;Dbxref=UniProtKB%2FTrEMBL:Q74XS1,Genbank:YP_002348261.1,GeneID:1176185;gbkey=CDS;product=hypothetical protein;protein_id=YP_002348261.1;transl_table=11
NC_003143.1	RefSeq	region	3756200	3756265	.	-	.	ID=id2434;Note=1 probable transmembrane helix predicted;Dbxref=GeneID:1176185;gbkey=misc_feature
NC_003143.1	RefSeq	gene	3756403	3756603	.	+	.	ID=gene3251;Name=YPO3368a;Dbxref=GeneID:16744774;gbkey=Gene;locus_tag=YPO3368a
NC_003143.1	RefSeq	CDS	3756403	3756603	.	+	0	ID=cds3093;Name=YP_008479726.1;Parent=gene3251;Dbxref=Genbank:YP_008479726.1,GeneID:16744774;gbkey=CDS;product=hypothetical protein;protein_id=YP_008479726.1;transl_table=11
NC_003143.1	RefSeq	gene	3756778	3757185	.	+	.	ID=gene3252;Name=YPO3369;Dbxref=GeneID:1176186;gbkey=Gene;locus_tag=YPO3369
NC_003143.1	RefSeq	CDS	3756778	3757185	.	+	0	ID=cds3094;Name=YP_002348262.1;Parent=gene3252;Dbxref=InterPro:IPR005357,UniProtKB%2FTrEMBL:Q0WBS6,Genbank:YP_002348262.1,GeneID:1176186;gbkey=CDS;product=hypothetical protein;protein_id=YP_002348262.1;transl_table=11
NC_003143.1	RefSeq	gene	3757431	3758154	.	-	.	ID=gene3253;Name=cysH;Dbxref=GeneID:1176187;gbkey=Gene;gene=cysH;locus_tag=YPO3370;pseudo=true
NC_003143.1	RefSeq	gene	3758151	3759881	.	-	.	ID=gene3254;Name=cysI;Dbxref=GeneID:1176188;gbkey=Gene;gene=cysI;locus_tag=YPO3371
NC_003143.1	RefSeq	CDS	3758151	3759881	.	-	0	ID=cds3095;Name=YP_002348263.1;Parent=gene3254;Note=hemoprotein%3B NADPH dependent%3B with the alpha subunit %28a flavoprotein%29 catalyzes the reduction of sulfite to sulfide;Dbxref=InterPro:IPR005117,InterPro:IPR006066,InterPro:IPR006067,InterPro:IPR008287,InterPro:IPR011255,InterPro:IPR011786,UniProtKB%2FTrEMBL:Q0WBS5,Genbank:YP_002348263.1,GeneID:1176188;gbkey=CDS;gene=cysI;product=sulfite reductase subunit beta;protein_id=YP_002348263.1;transl_table=11
NC_003143.1	RefSeq	region	3758400	3758450	.	-	.	ID=id2435;Note=PS00365 Nitrite and sulfite reductases iron-sulfur%2Fsiroheme-binding site.;Dbxref=GeneID:1176188;gbkey=misc_feature;gene=cysI
NC_003143.1	RefSeq	gene	3759881	3761701	.	-	.	ID=gene3255;Name=cysJ;Dbxref=GeneID:1176189;gbkey=Gene;gene=cysJ;locus_tag=YPO3372
NC_003143.1	RefSeq	CDS	3759881	3761701	.	-	0	ID=cds3096;Name=YP_002348264.1;Parent=gene3255;Note=catalyzes the reduction of sulfite to sulfide in the biosynthesis of L-cysteine from sulfate%3B a flavoprotein with flavin reductase activity;Dbxref=InterPro:IPR001094,InterPro:IPR001433,InterPro:IPR001709,InterPro:IPR003097,InterPro:IPR008254,InterPro:IPR010199,UniProtKB%2FTrEMBL:Q0WBS4,Genbank:YP_002348264.1,GeneID:1176189;gbkey=CDS;gene=cysJ;product=sulfite reductase subunit alpha;protein_id=YP_002348264.1;transl_table=11
NC_003143.1	RefSeq	gene	3762094	3762453	.	+	.	ID=gene3256;Name=ygcM;Dbxref=GeneID:1176190;gbkey=Gene;gene=ygcM;locus_tag=YPO3373
NC_003143.1	RefSeq	CDS	3762094	3762453	.	+	0	ID=cds3097;Name=YP_002348265.1;Parent=gene3256;Dbxref=InterPro:IPR007115,UniProtKB%2FTrEMBL:Q0WBS3,Genbank:YP_002348265.1,GeneID:1176190;gbkey=CDS;gene=ygcM;product=6-pyruvoyl tetrahydrobiopterin synthase;protein_id=YP_002348265.1;transl_table=11
NC_003143.1	RefSeq	gene	3762687	3763358	.	-	.	ID=gene3257;Name=YPO3374;Dbxref=GeneID:1176191;gbkey=Gene;locus_tag=YPO3374
NC_003143.1	RefSeq	CDS	3762687	3763358	.	-	0	ID=cds3098;Name=YP_002348266.1;Parent=gene3257;Dbxref=InterPro:IPR007197,UniProtKB%2FTrEMBL:Q7CKD0,Genbank:YP_002348266.1,GeneID:1176191;gbkey=CDS;product=hypothetical protein;protein_id=YP_002348266.1;transl_table=11
NC_003143.1	RefSeq	gene	3763462	3764067	.	-	.	ID=gene3258;Name=sodC;Dbxref=GeneID:1176192;gbkey=Gene;gene=sodC;locus_tag=YPO3375
NC_003143.1	RefSeq	CDS	3763462	3764067	.	-	0	ID=cds3099;Name=YP_002348267.1;Parent=gene3258;Dbxref=InterPro:IPR001424,UniProtKB%2FTrEMBL:Q74XS8,Genbank:YP_002348267.1,GeneID:1176192;gbkey=CDS;gene=sodC;product=superoxide dismutase;protein_id=YP_002348267.1;transl_table=11
NC_003143.1	RefSeq	region	3763468	3763503	.	-	.	ID=id2436;Note=PS00332 Copper%2FZinc superoxide dismutase signature 2.;Dbxref=GeneID:1176192;gbkey=misc_feature;gene=sodC
NC_003143.1	RefSeq	region	3763762	3763794	.	-	.	ID=id2437;Note=PS00087 Copper%2FZinc superoxide dismutase signature 1.;Dbxref=GeneID:1176192;gbkey=misc_feature;gene=sodC
NC_003143.1	RefSeq	gene	3764439	3765734	.	-	.	ID=gene3259;Name=eno;Dbxref=GeneID:1176193;gbkey=Gene;gene=eno;locus_tag=YPO3376
NC_003143.1	RefSeq	CDS	3764439	3765734	.	-	0	ID=cds3100;Name=YP_002348268.1;Parent=gene3259;Note=enolase%3B catalyzes the formation of phosphoenolpyruvate from 2-phospho-D-glycerate in glycolysis;Dbxref=InterPro:IPR000941,UniProtKB%2FTrEMBL:Q0WBS0,Genbank:YP_002348268.1,GeneID:1176193;gbkey=CDS;gene=eno;product=phosphopyruvate hydratase;protein_id=YP_002348268.1;transl_table=11
NC_003143.1	RefSeq	region	3764679	3764720	.	-	.	ID=id2438;Note=PS00164 Enolase signature.;Dbxref=GeneID:1176193;gbkey=misc_feature;gene=eno
NC_003143.1	RefSeq	gene	3765815	3767452	.	-	.	ID=gene3260;Name=pyrG;Dbxref=GeneID:1176194;gbkey=Gene;gene=pyrG;locus_tag=YPO3377
NC_003143.1	RefSeq	CDS	3765815	3767452	.	-	0	ID=cds3101;Name=YP_002348269.1;Parent=gene3260;Note=CTP synthase%3B cytidine triphosphate synthetase%3B catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen%3B in Escherichia coli this enzyme forms a homotetramer;Dbxref=InterPro:IPR000991,InterPro:IPR004468,InterPro:IPR012998,UniProtKB%2FTrEMBL:Q0WBR9,Genbank:YP_002348269.1,GeneID:1176194;gbkey=CDS;gene=pyrG;product=CTP synthetase;protein_id=YP_002348269.1;transl_table=11
NC_003143.1	RefSeq	region	3766298	3766333	.	-	.	ID=id2439;Note=PS00442 Glutamine amidotransferases class-I active site.;Dbxref=GeneID:1176194;gbkey=misc_feature;gene=pyrG
NC_003143.1	RefSeq	gene	3767664	3768506	.	-	.	ID=gene3261;Name=mazG;Dbxref=GeneID:1176195;gbkey=Gene;gene=mazG;locus_tag=YPO3378
NC_003143.1	RefSeq	CDS	3767664	3768506	.	-	0	ID=cds3102;Name=YP_002348270.1;Parent=gene3261;Note=functions in degradation of stringent response intracellular messenger ppGpp%3B in Escherichia coli this gene is co-transcribed with the toxin%2Fantitoxin genes mazEF%3B activity of MazG is inhibited by MazEF in vitro%3B ppGpp inhibits mazEF expression%3B MazG thus works in limiting the toxic activity of the MazF toxin induced during starvation%3B MazG also interacts with the GTPase protein Era;Dbxref=InterPro:IPR004518,InterPro:IPR011551,InterPro:IPR012199,UniProtKB%2FTrEMBL:Q7CKD1,Genbank:YP_002348270.1,GeneID:1176195;gbkey=CDS;gene=mazG;product=nucleoside triphosphate pyrophosphohydrolase;protein_id=YP_002348270.1;transl_table=11
NC_003143.1	RefSeq	gene	3768708	3770942	.	-	.	ID=gene3262;Name=relA;Dbxref=GeneID:1176197;gbkey=Gene;gene=relA;locus_tag=YPO3380
NC_003143.1	RefSeq	CDS	3768708	3770942	.	-	0	ID=cds3103;Name=YP_002348272.1;Parent=gene3262;Note=%28p%29ppGpp synthetase%3B catalyzes the formation of pppGpp and ppGpp from ATP and GTP or GDP;Dbxref=InterPro:IPR002912,InterPro:IPR004095,InterPro:IPR004811,InterPro:IPR007685,InterPro:IPR012675,InterPro:IPR012676,UniProtKB%2FTrEMBL:Q7CKD2,Genbank:YP_002348272.1,GeneID:1176197;gbkey=CDS;gene=relA;product=GDP%2FGTP pyrophosphokinase;protein_id=YP_002348272.1;transl_table=11
NC_003143.1	RefSeq	gene	3771386	3774178	.	+	.	ID=gene3263;Name=barA;Dbxref=GeneID:1176198;gbkey=Gene;gene=barA;locus_tag=YPO3381
NC_003143.1	RefSeq	CDS	3771386	3774178	.	+	0	ID=cds3104;Name=YP_002348273.1;Parent=gene3263;Note=part of the two-component regulatory system with UvrY%3B involved in the regulation of carbon metabolism via the csrA%2FcsrB regulatory system;Dbxref=InterPro:IPR001789,InterPro:IPR003594,InterPro:IPR003660,InterPro:IPR003661,InterPro:IPR004358,InterPro:IPR005467,InterPro:IPR008207,InterPro:IPR009082,InterPro:IPR009184,InterPro:IPR011006,UniProtKB%2FTrEMBL:Q0WBR5,Genbank:YP_002348273.1,GeneID:1176198;gbkey=CDS;gene=barA;product=hybrid sensory histidine kinase BarA;protein_id=YP_002348273.1;transl_table=11
NC_003143.1	RefSeq	gene	3774353	3775798	.	-	.	ID=gene3264;Name=gsrA;Dbxref=GeneID:1176199;gbkey=Gene;gene=gsrA;gene_synonym=htrA,ptd;locus_tag=YPO3382
NC_003143.1	RefSeq	CDS	3774353	3775798	.	-	0	ID=cds3105;Name=YP_002348274.1;Parent=gene3264;Note=protease Do%3B required at high temperature%3B degrades damaged proteins;Dbxref=InterPro:IPR001254,InterPro:IPR001478,InterPro:IPR001940,InterPro:IPR009003,InterPro:IPR011782,UniProtKB%2FTrEMBL:Q7CKD3,Genbank:YP_002348274.1,GeneID:1176199;gbkey=CDS;gene=gsrA;product=serine endoprotease;protein_id=YP_002348274.1;transl_table=11
NC_003143.1	RefSeq	gene	3775996	3777516	.	-	.	ID=gene3265;Name=dgt;Dbxref=GeneID:1176200;gbkey=Gene;gene=dgt;locus_tag=YPO3383
NC_003143.1	RefSeq	CDS	3775996	3777516	.	-	0	ID=cds3106;Name=YP_002348275.1;Parent=gene3265;Note=forms a homotetramer%3B requires magnesium for activity%3B catalyzes the hydrolysis of dGTP to form deoxyguanosine and triphosphate;Dbxref=InterPro:IPR003607,InterPro:IPR006261,InterPro:IPR006674,UniProtKB%2FTrEMBL:Q0WBR3,Genbank:YP_002348275.1,GeneID:1176200;gbkey=CDS;gene=dgt;product=deoxyguanosinetriphosphate triphosphohydrolase;protein_id=YP_002348275.1;transl_table=11
NC_003143.1	RefSeq	gene	3777810	3778511	.	+	.	ID=gene3266;Name=mtn;Dbxref=GeneID:1176201;gbkey=Gene;gene=mtn;gene_synonym=pfs;locus_tag=YPO3384
NC_003143.1	RefSeq	CDS	3777810	3778511	.	+	0	ID=cds3107;Name=YP_002348276.1;Parent=gene3266;Note=enables the cleavage of the glycosidic bond in both 5%27-methylthioadenosine and S-adenosylhomocysteine;Dbxref=InterPro:IPR000845,InterPro:IPR010049,UniProtKB%2FTrEMBL:Q7CKD4,Genbank:YP_002348276.1,GeneID:1176201;gbkey=CDS;gene=mtn;product=5%27-methylthioadenosine%2FS-adenosylhomocysteine nucleosidase;protein_id=YP_002348276.1;transl_table=11
NC_003143.1	RefSeq	gene	3778511	3779353	.	+	.	ID=gene3267;Name=btuF;Dbxref=GeneID:1176202;gbkey=Gene;gene=btuF;gene_synonym=yadT;locus_tag=YPO3385
NC_003143.1	RefSeq	CDS	3778511	3779353	.	+	0	ID=cds3108;Name=YP_002348277.1;Parent=gene3267;Note=solute binding component of the vitamin B12 transport system BtuCDF;Dbxref=InterPro:IPR002491,UniProtKB%2FTrEMBL:Q0WBR1,Genbank:YP_002348277.1,GeneID:1176202;gbkey=CDS;gene=btuF;product=vitamin B12-transporter protein BtuF;protein_id=YP_002348277.1;transl_table=11
NC_003143.1	RefSeq	gene	3779353	3779967	.	+	.	ID=gene3268;Name=yadS;Dbxref=GeneID:1176203;gbkey=Gene;gene=yadS;locus_tag=YPO3386
NC_003143.1	RefSeq	CDS	3779353	3779967	.	+	0	ID=cds3109;Name=YP_002348278.1;Parent=gene3268;Dbxref=InterPro:IPR005115,UniProtKB%2FTrEMBL:Q0WBR0,Genbank:YP_002348278.1,GeneID:1176203;gbkey=CDS;gene=yadS;product=hypothetical protein;protein_id=YP_002348278.1;transl_table=11
NC_003143.1	RefSeq	gene	3780252	3780596	.	-	.	ID=gene3269;Name=YPO3387;Dbxref=GeneID:1176204;gbkey=Gene;locus_tag=YPO3387
NC_003143.1	RefSeq	CDS	3780252	3780596	.	-	0	ID=cds3110;Name=YP_002348279.1;Parent=gene3269;Note=essential respiratory protein A%3B may be involved in the transfer of iron-sulfur clusters%3B essential for growth using oxygen or alternate electron acceptors;Dbxref=InterPro:IPR000361,UniProtKB%2FTrEMBL:Q0WBQ9,Genbank:YP_002348279.1,GeneID:1176204;gbkey=CDS;product=iron-sulfur cluster insertion protein ErpA;protein_id=YP_002348279.1;transl_table=11
NC_003143.1	RefSeq	region	3780261	3780314	.	-	.	ID=id2440;Note=PS01152 Hypothetical hesB%2FyadR%2FyfhF family signature.;Dbxref=GeneID:1176204;gbkey=misc_feature
NC_003143.1	RefSeq	gene	3780732	3782168	.	-	.	ID=gene3270;Name=yadQ;Dbxref=GeneID:1176205;gbkey=Gene;gene=yadQ;locus_tag=YPO3388
NC_003143.1	RefSeq	CDS	3780732	3782168	.	-	0	ID=cds3111;Name=YP_002348280.1;Parent=gene3270;Note=Acts as an electrical shunt for an outwardly-directed proton pump that is linked to amino acid decarboxylation;Dbxref=InterPro:IPR001807,UniProtKB%2FTrEMBL:Q0WBQ8,Genbank:YP_002348280.1,GeneID:1176205;gbkey=CDS;gene=yadQ;product=chloride channel protein;protein_id=YP_002348280.1;transl_table=11
NC_003143.1	RefSeq	region	3781620	3781652	.	-	.	ID=id2441;Note=PS00639 Eukaryotic thiol %28cysteine%29 proteases histidine active site.;Dbxref=GeneID:1176205;gbkey=misc_feature;gene=yadQ
NC_003143.1	RefSeq	gene	3782549	3783829	.	+	.	ID=gene3271;Name=hemL;Dbxref=GeneID:1176206;gbkey=Gene;gene=hemL;gene_synonym=popC;locus_tag=YPO3389
NC_003143.1	RefSeq	CDS	3782549	3783829	.	+	0	ID=cds3112;Name=YP_002348281.1;Parent=gene3271;Note=Converts %28S%29-4-amino-5-oxopentanoate to 5-aminolevulinate during the porphyrin biosynthesis pathway;Dbxref=InterPro:IPR004639,InterPro:IPR005814,UniProtKB%2FTrEMBL:Q0WBQ7,Genbank:YP_002348281.1,GeneID:1176206;gbkey=CDS;gene=hemL;product=glutamate-1-semialdehyde aminotransferase;protein_id=YP_002348281.1;transl_table=11
NC_003143.1	RefSeq	region	3783248	3783358	.	+	.	ID=id2442;Note=PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site.;Dbxref=GeneID:1176206;gbkey=misc_feature;gene=hemL
NC_003143.1	RefSeq	gene	3784203	3786200	.	-	.	ID=gene3272;Name=fhuB;Dbxref=GeneID:1176207;gbkey=Gene;gene=fhuB;locus_tag=YPO3390
NC_003143.1	RefSeq	CDS	3784203	3786200	.	-	0	ID=cds3113;Name=YP_002348282.1;Parent=gene3272;Note=part of the FhuBCD ATP-dependent iron %28III%29 hydroxamate transporter involved in the high-affinity transport of Fe%283%2B%29-ferrichrome;Dbxref=InterPro:IPR000522,UniProtKB%2FTrEMBL:Q74XT8,Genbank:YP_002348282.1,GeneID:1176207;gbkey=CDS;gene=fhuB;product=iron-hydroxamate transporter permease;protein_id=YP_002348282.1;transl_table=11
NC_003143.1	RefSeq	gene	3786197	3787285	.	-	.	ID=gene3273;Name=fhuD;Dbxref=GeneID:1176208;gbkey=Gene;gene=fhuD;locus_tag=YPO3391
NC_003143.1	RefSeq	CDS	3786197	3787285	.	-	0	ID=cds3114;Name=YP_002348283.1;Parent=gene3273;Note=Part of the FhuBCD ATP-dependent iron %28III%29 hydroxamate transporter%3B binds to all hydroxamate siderophores;Dbxref=InterPro:IPR002491,InterPro:IPR008091,UniProtKB%2FTrEMBL:Q74XT9,Genbank:YP_002348283.1,GeneID:1176208;gbkey=CDS;gene=fhuD;product=iron-hydroxamate transporter substrate-binding subunit;protein_id=YP_002348283.1;transl_table=11
NC_003143.1	RefSeq	region	3786398	3786427	.	-	.	ID=id2443;Note=PS00339 Aminoacyl-transfer RNA synthetases class-II signature 2.;Dbxref=GeneID:1176208;gbkey=misc_feature;gene=fhuD
NC_003143.1	RefSeq	gene	3787285	3788079	.	-	.	ID=gene3274;Name=fhuC;Dbxref=GeneID:1176209;gbkey=Gene;gene=fhuC;locus_tag=YPO3392
NC_003143.1	RefSeq	CDS	3787285	3788079	.	-	0	ID=cds3115;Name=YP_002348284.1;Parent=gene3274;Note=part of the FhuBCD ATP-dependent iron %28III%29 hydroxamate transporter;Dbxref=InterPro:IPR003439,InterPro:IPR003593,UniProtKB%2FTrEMBL:Q7CKD5,Genbank:YP_002348284.1,GeneID:1176209;gbkey=CDS;gene=fhuC;product=iron-hydroxamate transporter ATP-binding protein;protein_id=YP_002348284.1;transl_table=11
NC_003143.1	RefSeq	region	3787597	3787641	.	-	.	ID=id2444;Note=PS00211 ABC transporters family signature.;Dbxref=GeneID:1176209;gbkey=misc_feature;gene=fhuC
NC_003143.1	RefSeq	region	3787930	3787953	.	-	.	ID=id2445;Note=PS00017 ATP%2FGTP-binding site motif A %28P-loop%29.;Dbxref=GeneID:1176209;gbkey=misc_feature;gene=fhuC
NC_003143.1	RefSeq	gene	3788401	3790875	.	-	.	ID=gene3275;Name=mrcB;Dbxref=GeneID:1176210;gbkey=Gene;gene=mrcB;gene_synonym=pbpF,ponB;locus_tag=YPO3393
NC_003143.1	RefSeq	CDS	3788401	3790875	.	-	0	ID=cds3116;Name=YP_002348285.1;Parent=gene3275;Note=bifunctional periplasmic enzyme%3B contains transglycosylase and transpeptidase activity%3B major enzyme for peptidoglycan biosynthesis in Escherichia coli%3B transmembrane protein%3B forms dimers%3B three variants%2C one of which may be a degradation product%2C while the other appears to result from an alternative initiation site%2C are found within the cell;Dbxref=InterPro:IPR001264,InterPro:IPR001460,InterPro:IPR011813,InterPro:IPR012338,UniProtKB%2FTrEMBL:Q0WBQ3,Genbank:YP_002348285.1,GeneID:1176210;gbkey=CDS;gene=mrcB;product=penicillin-binding protein 1b;protein_id=YP_002348285.1;transl_table=11
NC_003143.1	RefSeq	region	3790606	3790671	.	-	.	ID=id2446;Note=1 probable transmembrane helix predicted;Dbxref=GeneID:1176210;gbkey=misc_feature;gene=mrcB
NC_003143.1	RefSeq	gene	3790984	3793542	.	-	.	ID=gene3276;Name=hrpB;Dbxref=GeneID:1176211;gbkey=Gene;gene=hrpB;locus_tag=YPO3394
NC_003143.1	RefSeq	CDS	3790984	3793542	.	-	0	ID=cds3117;Name=YP_002348286.1;Parent=gene3276;Note=similar in sequence to the ATP-dependent RNA helicase HrpA;Dbxref=InterPro:IPR001650,InterPro:IPR007502,InterPro:IPR010225,InterPro:IPR011545,InterPro:IPR013689,InterPro:IPR014001,InterPro:IPR014021,UniProtKB%2FTrEMBL:Q0WBQ2,Genbank:YP_002348286.1,GeneID:1176211;gbkey=CDS;gene=hrpB;product=ATP-dependent RNA helicase HrpB;protein_id=YP_002348286.1;transl_table=11
NC_003143.1	RefSeq	region	3791506	3791535	.	-	.	ID=id2447;Note=PS00215 Mitochondrial energy transfer proteins signature.;Dbxref=GeneID:1176211;gbkey=misc_feature;gene=hrpB
NC_003143.1	RefSeq	region	3793342	3793365	.	-	.	ID=id2448;Note=PS00017 ATP%2FGTP-binding site motif A %28P-loop%29.;Dbxref=GeneID:1176211;gbkey=misc_feature;gene=hrpB
NC_003143.1	RefSeq	gene	3793586	3794161	.	+	.	ID=gene3277;Name=ligT;Dbxref=GeneID:1176212;gbkey=Gene;gene=ligT;locus_tag=YPO3395
NC_003143.1	RefSeq	CDS	3793586	3794161	.	+	0	ID=cds3118;Name=YP_002348287.1;Parent=gene3277;Dbxref=InterPro:IPR004175,InterPro:IPR009097,UniProtKB%2FTrEMBL:Q7CKD6,Genbank:YP_002348287.1,GeneID:1176212;gbkey=CDS;gene=ligT;product=2%27-5%27 RNA ligase;protein_id=YP_002348287.1;transl_table=11
NC_003143.1	RefSeq	gene	3794274	3795011	.	+	.	ID=gene3278;Name=sfsA;Dbxref=GeneID:1176213;gbkey=Gene;gene=sfsA;locus_tag=YPO3396
NC_003143.1	RefSeq	CDS	3794274	3795011	.	+	0	ID=cds3119;Name=YP_002348288.1;Parent=gene3278;Note=Regulatory factor involved in maltose metabolism;Dbxref=InterPro:IPR005224,UniProtKB%2FTrEMBL:Q0WBQ0,Genbank:YP_002348288.1,GeneID:1176213;gbkey=CDS;gene=sfsA;product=sugar fermentation stimulation protein A;protein_id=YP_002348288.1;transl_table=11
NC_003143.1	RefSeq	gene	3795181	3795636	.	+	.	ID=gene3279;Name=dksA;Dbxref=GeneID:1176214;gbkey=Gene;gene=dksA;locus_tag=YPO3397
NC_003143.1	RefSeq	CDS	3795181	3795636	.	+	0	ID=cds3120;Name=YP_002348289.1;Parent=gene3279;Dbxref=InterPro:IPR000962,InterPro:IPR012784,UniProtKB%2FTrEMBL:Q0WBP9,Genbank:YP_002348289.1,GeneID:1176214;gbkey=CDS;gene=dksA;product=RNA polymerase-binding transcription factor;protein_id=YP_002348289.1;transl_table=11
NC_003143.1	RefSeq	region	3795520	3795594	.	+	.	ID=id2449;Note=PS01102 Prokaryotic dksA%2FtraR C4-type zinc finger.;Dbxref=GeneID:1176214;gbkey=misc_feature;gene=dksA
NC_003143.1	RefSeq	gene	3795916	3796881	.	+	.	ID=gene3280;Name=yadB;Dbxref=GeneID:1176215;gbkey=Gene;gene=yadB;locus_tag=YPO3398
NC_003143.1	RefSeq	CDS	3795916	3796881	.	+	0	ID=cds3121;Name=YP_002348290.1;Parent=gene3280;Note=this tRNA synthetase lacks the tRNA anticodon interaction domain%3B instead this enzyme modifies tRNA%28Asp%29 with glutamate by esterifying glutamate to the 2-amino-5-%284%2C5-dihydroxy-2-cyclopenten-1-yl%29 moiety of queosine generating a modified nucleoside at the first anticodon position of tRNAAsp%3B the modified tRNA does not bind elongation factor Tu;Dbxref=InterPro:IPR000924,InterPro:IPR001412,UniProtKB%2FTrEMBL:Q0WBP8,Genbank:YP_002348290.1,GeneID:1176215;gbkey=CDS;gene=yadB;product=glutamyl-Q tRNA%28Asp%29 synthetase;protein_id=YP_002348290.1;transl_table=11
NC_003143.1	RefSeq	gene	3796970	3798445	.	+	.	ID=gene3281;Name=pcnB;Dbxref=GeneID:1176216;gbkey=Gene;gene=pcnB;locus_tag=YPO3399
NC_003143.1	RefSeq	CDS	3796970	3798445	.	+	0	ID=cds3122;Name=YP_002348291.1;Parent=gene3281;Note=Polymerase that creates the 3%27 poly%28A%29 tail found in some mRNA%27s;Dbxref=InterPro:IPR002646,InterPro:IPR010206,InterPro:IPR012222,UniProtKB%2FTrEMBL:Q0WBP7,Genbank:YP_002348291.1,GeneID:1176216;gbkey=CDS;gene=pcnB;product=poly%28A%29 polymerase;protein_id=YP_002348291.1;transl_table=11
NC_003143.1	RefSeq	gene	3798453	3798932	.	+	.	ID=gene3282;Name=folK;Dbxref=GeneID:1176217;gbkey=Gene;gene=folK;locus_tag=YPO3400
NC_003143.1	RefSeq	CDS	3798453	3798932	.	+	0	ID=cds3123;Name=YP_002348292.1;Parent=gene3282;Dbxref=InterPro:IPR000550,UniProtKB%2FTrEMBL:Q7CKD7,Genbank:YP_002348292.1,GeneID:1176217;gbkey=CDS;gene=folK;product=2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase;protein_id=YP_002348292.1;transl_table=11
NC_003143.1	RefSeq	region	3798717	3798752	.	+	.	ID=id2450;Note=PS00794 7%2C8-dihydro-6-hydroxymethylpterin-pyrophosphokinase signature.;Dbxref=GeneID:1176217;gbkey=misc_feature;gene=folK
NC_003143.1	RefSeq	gene	3799198	3799998	.	+	.	ID=gene3283;Name=panB;Dbxref=GeneID:1176218;gbkey=Gene;gene=panB;locus_tag=YPO3401
NC_003143.1	RefSeq	CDS	3799198	3799998	.	+	0	ID=cds3124;Name=YP_002348293.1;Parent=gene3283;Note=catalyzes the formation of tetrahydrofolate and 2-dehydropantoate from 5%2C10-methylenetetrahydrofolate and 3-methyl-2-oxobutanoate;Dbxref=InterPro:IPR003700,UniProtKB%2FTrEMBL:Q0WBP5,Genbank:YP_002348293.1,GeneID:1176218;gbkey=CDS;gene=panB;product=3-methyl-2-oxobutanoate hydroxymethyltransferase;protein_id=YP_002348293.1;transl_table=11
NC_003143.1	RefSeq	gene	3800086	3800940	.	+	.	ID=gene3284;Name=panC;Dbxref=GeneID:1176219;gbkey=Gene;gene=panC;locus_tag=YPO3402
NC_003143.1	RefSeq	CDS	3800086	3800940	.	+	0	ID=cds3125;Name=YP_002348294.1;Parent=gene3284;Note=catalyzes the formation of %28R%29-pantothenate from pantoate and beta-alanine;Dbxref=InterPro:IPR003721,UniProtKB%2FTrEMBL:Q0WBP4,Genbank:YP_002348294.1,GeneID:1176219;gbkey=CDS;gene=panC;product=pantoate--beta-alanine ligase;protein_id=YP_002348294.1;transl_table=11
NC_003143.1	RefSeq	gene	3801351	3801731	.	+	.	ID=gene3285;Name=panD;Dbxref=GeneID:1176220;gbkey=Gene;gene=panD;locus_tag=YPO3403
NC_003143.1	RefSeq	CDS	3801351	3801731	.	+	0	ID=cds3126;Name=YP_002348295.1;Parent=gene3285;Note=Converts L-aspartate to beta-alanine and provides the major route of beta-alanine production in bacteria. Beta-alanine is essential for the biosynthesis of pantothenate %28vitamin B5%29;Dbxref=InterPro:IPR003190,InterPro:IPR009010,UniProtKB%2FTrEMBL:Q0WBP3,Genbank:YP_002348295.1,GeneID:1176220;gbkey=CDS;gene=panD;product=aspartate alpha-decarboxylase;protein_id=YP_002348295.1;transl_table=11
NC_003143.1	RefSeq	gene	3801880	3803073	.	-	.	ID=gene3286;Name=YPO3404;Dbxref=GeneID:1176221;gbkey=Gene;locus_tag=YPO3404
NC_003143.1	RefSeq	CDS	3801880	3803073	.	-	0	ID=cds3127;Name=YP_002348296.1;Parent=gene3286;Dbxref=InterPro:IPR002509,UniProtKB%2FTrEMBL:Q0WBP2,Genbank:YP_002348296.1,GeneID:1176221;gbkey=CDS;product=hypothetical protein;protein_id=YP_002348296.1;transl_table=11
NC_003143.1	RefSeq	gene	3803400	3804170	.	-	.	ID=gene3287;Name=yadH;Dbxref=GeneID:1176222;gbkey=Gene;gene=yadH;locus_tag=YPO3405
NC_003143.1	RefSeq	CDS	3803400	3804170	.	-	0	ID=cds3128;Name=YP_002348297.1;Parent=gene3287;Dbxref=InterPro:IPR000412,InterPro:IPR013525,InterPro:IPR013526,UniProtKB%2FTrEMBL:Q7CKD8,Genbank:YP_002348297.1,GeneID:1176222;gbkey=CDS;gene=yadH;product=ABC transporter integral membrane protein;protein_id=YP_002348297.1;transl_table=11
NC_003143.1	RefSeq	region	3803526	3803639	.	-	.	ID=id2451;Note=PS00890 ABC-2 type transport system integral membrane proteins signature.;Dbxref=GeneID:1176222;gbkey=misc_feature;gene=yadH
NC_003143.1	RefSeq	gene	3804167	3805093	.	-	.	ID=gene3288;Name=yadG;Dbxref=GeneID:1176223;gbkey=Gene;gene=yadG;locus_tag=YPO3406
NC_003143.1	RefSeq	CDS	3804167	3805093	.	-	0	ID=cds3129;Name=YP_002348298.1;Parent=gene3288;Dbxref=InterPro:IPR003439,InterPro:IPR003593,UniProtKB%2FTrEMBL:Q7CKD9,Genbank:YP_002348298.1,GeneID:1176223;gbkey=CDS;gene=yadG;product=ABC transporter ATP-binding protein;protein_id=YP_002348298.1;transl_table=11
NC_003143.1	RefSeq	region	3804641	3804685	.	-	.	ID=id2452;Note=PS00211 ABC transporters family signature.;Dbxref=GeneID:1176223;gbkey=misc_feature;gene=yadG
NC_003143.1	RefSeq	region	3804959	3804982	.	-	.	ID=id2453;Note=PS00017 ATP%2FGTP-binding site motif A %28P-loop%29.;Dbxref=GeneID:1176223;gbkey=misc_feature;gene=yadG
NC_003143.1	RefSeq	gene	3805329	3805991	.	+	.	ID=gene3289;Name=yadF;Dbxref=GeneID:1176224;gbkey=Gene;gene=yadF;locus_tag=YPO3407
NC_003143.1	RefSeq	CDS	3805329	3805991	.	+	0	ID=cds3130;Name=YP_002348299.1;Parent=gene3289;Dbxref=InterPro:IPR001765,UniProtKB%2FTrEMBL:Q0WBN9,Genbank:YP_002348299.1,GeneID:1176224;gbkey=CDS;gene=yadF;product=carbonic anhydrase;protein_id=YP_002348299.1;transl_table=11
NC_003143.1	RefSeq	region	3805452	3805475	.	+	.	ID=id2454;Note=PS00704 Prokaryotic-type carbonic anhydrases signature 1.;Dbxref=GeneID:1176224;gbkey=misc_feature;gene=yadF
NC_003143.1	RefSeq	region	3805572	3805634	.	+	.	ID=id2455;Note=PS00705 Prokaryotic-type carbonic anhydrases signature 2.;Dbxref=GeneID:1176224;gbkey=misc_feature;gene=yadF
NC_003143.1	RefSeq	gene	3806145	3806681	.	-	.	ID=gene3290;Name=hpt;Dbxref=GeneID:1176225;gbkey=Gene;gene=hpt;gene_synonym=hpt;locus_tag=YPO3408
NC_003143.1	RefSeq	CDS	3806145	3806681	.	-	0	ID=cds3131;Name=YP_002348300.1;Parent=gene3290;Dbxref=InterPro:IPR000836,InterPro:IPR002375,InterPro:IPR005904,UniProtKB%2FTrEMBL:Q0WBN8,Genbank:YP_002348300.1,GeneID:1176225;gbkey=CDS;gene=hpt;product=hypoxanthine phosphoribosyltransferase;protein_id=YP_002348300.1;transl_table=11
NC_003143.1	RefSeq	region	3806361	3806399	.	-	.	ID=id2456;Note=PS00103 Purine%2Fpyrimidine phosphoribosyl transferases signature.;Dbxref=GeneID:1176225;gbkey=misc_feature;gene=hpt
NC_003143.1	RefSeq	gene	3806901	3808502	.	-	.	ID=gene3291;Name=yacK;Dbxref=GeneID:1176226;gbkey=Gene;gene=yacK;locus_tag=YPO3409
NC_003143.1	RefSeq	CDS	3806901	3808502	.	-	0	ID=cds3132;Name=YP_002348301.1;Parent=gene3291;Note=laccase%3B copper-stimulated phenoloxidase and ferroxidase which may be involved in copper detoxification;Dbxref=InterPro:IPR001117,InterPro:IPR002355,InterPro:IPR006311,InterPro:IPR008972,InterPro:IPR011706,InterPro:IPR011707,UniProtKB%2FTrEMBL:Q0WBN7,Genbank:YP_002348301.1,GeneID:1176226;gbkey=CDS;gene=yacK;product=multicopper oxidase;protein_id=YP_002348301.1;transl_table=11
NC_003143.1	RefSeq	region	3806928	3806963	.	-	.	ID=id2457;Note=PS00080 Multicopper oxidases signature 2.;Dbxref=GeneID:1176226;gbkey=misc_feature;gene=yacK
NC_003143.1	RefSeq	gene	3808819	3809166	.	+	.	ID=gene3292;Name=yacC;Dbxref=GeneID:1176227;gbkey=Gene;gene=yacC;locus_tag=YPO3410
NC_003143.1	RefSeq	CDS	3808819	3809166	.	+	0	ID=cds3133;Name=YP_002348302.1;Parent=gene3292;Dbxref=UniProtKB%2FTrEMBL:Q7CKE0,Genbank:YP_002348302.1,GeneID:1176227;gbkey=CDS;gene=yacC;product=hypothetical protein;protein_id=YP_002348302.1;transl_table=11
NC_003143.1	RefSeq	gene	3809283	3810173	.	+	.	ID=gene3293;Name=speE;Dbxref=GeneID:1176228;gbkey=Gene;gene=speE;locus_tag=YPO3411
NC_003143.1	RefSeq	CDS	3809283	3810173	.	+	0	ID=cds3134;Name=YP_002348303.1;Parent=gene3293;Note=catalyzes the formation of spermidine from putrescine and S-adenosylmethioninamine;Dbxref=InterPro:IPR001045,UniProtKB%2FTrEMBL:Q0WBN5,Genbank:YP_002348303.1,GeneID:1176228;gbkey=CDS;gene=speE;product=spermidine synthase;protein_id=YP_002348303.1;transl_table=11
NC_003143.1	RefSeq	region	3809523	3809564	.	+	.	ID=id2458;Note=PS01330 Spermidine%2Fspermine synthases family signature.;Dbxref=GeneID:1176228;gbkey=misc_feature;gene=speE
NC_003143.1	RefSeq	gene	3810251	3811045	.	+	.	ID=gene3294;Name=speD;Dbxref=GeneID:1176229;gbkey=Gene;gene=speD;locus_tag=YPO3412
NC_003143.1	RefSeq	CDS	3810251	3811045	.	+	0	ID=cds3135;Name=YP_002348304.1;Parent=gene3294;Note=S-adenosylmethionine provides the aminopropyl moiety required for spermidine biosynthesis from putrescine;Dbxref=InterPro:IPR003826,InterPro:IPR009165,UniProtKB%2FTrEMBL:Q0WBN4,Genbank:YP_002348304.1,GeneID:1176229;gbkey=CDS;gene=speD;product=S-adenosylmethionine decarboxylase;protein_id=YP_002348304.1;transl_table=11
NC_003143.1	RefSeq	gene	3811483	3812391	.	+	.	ID=gene3295;Name=yddG;Dbxref=GeneID:1176230;gbkey=Gene;gene=yddG;locus_tag=YPO3413
NC_003143.1	RefSeq	CDS	3811483	3812391	.	+	0	ID=cds3136;Name=YP_002348305.1;Parent=gene3295;Dbxref=InterPro:IPR000620,UniProtKB%2FTrEMBL:Q7CKE1,Genbank:YP_002348305.1,GeneID:1176230;gbkey=CDS;gene=yddG;product=hypothetical protein;protein_id=YP_002348305.1;transl_table=11
NC_003143.1	RefSeq	gene	3812502	3812861	.	-	.	ID=gene3296;Name=YPO3414;Dbxref=GeneID:1176231;gbkey=Gene;locus_tag=YPO3414
NC_003143.1	RefSeq	CDS	3812502	3812861	.	-	0	ID=cds3137;Name=YP_002348306.1;Parent=gene3296;Dbxref=InterPro:IPR008249,UniProtKB%2FTrEMBL:Q0WBN2,Genbank:YP_002348306.1,GeneID:1176231;gbkey=CDS;product=hypothetical protein;protein_id=YP_002348306.1;transl_table=11
NC_003143.1	RefSeq	gene	3813160	3815757	.	-	.	ID=gene3297;Name=acnB;Dbxref=GeneID:1176232;gbkey=Gene;gene=acnB;locus_tag=YPO3415
NC_003143.1	RefSeq	CDS	3813160	3815757	.	-	0	ID=cds3138;Name=YP_002348307.1;Parent=gene3297;Note=catalyzes the conversion of citrate to isocitrate and the conversion of 2-methylaconitate to 2-methylisocitrate;Dbxref=InterPro:IPR001030,InterPro:IPR004406,UniProtKB%2FTrEMBL:Q7CKE2,Genbank:YP_002348307.1,GeneID:1176232;gbkey=CDS;gene=acnB;product=bifunctional aconitate hydratase 2%2F2-methylisocitrate dehydratase;protein_id=YP_002348307.1;transl_table=11
NC_003143.1	RefSeq	region	3813436	3813477	.	-	.	ID=id2459;Note=PS01244 Aconitase family signature 2.;Dbxref=GeneID:1176232;gbkey=misc_feature;gene=acnB
NC_003143.1	RefSeq	region	3813601	3813654	.	-	.	ID=id2460;Note=PS00450 Aconitase family signature 1.;Dbxref=GeneID:1176232;gbkey=misc_feature;gene=acnB
NC_003143.1	RefSeq	repeat_region	3816219	3816930	.	-	.	ID=id2461;Note=Contains a %27G%27 at nucleotide position 315%7EIS200-like insertion sequence:IS1541;gbkey=repeat_region
NC_003143.1	RefSeq	gene	3816327	3816785	.	-	.	ID=gene3298;Name=tnp;Dbxref=GeneID:1176233;gbkey=Gene;gene=tnp;locus_tag=YPO3416
NC_003143.1	RefSeq	CDS	3816327	3816785	.	-	0	ID=cds3139;Name=YP_002348308.1;Parent=gene3298;Dbxref=InterPro:IPR002686,UniProtKB%2FTrEMBL:Q74YM6,Genbank:YP_002348308.1,GeneID:1176233;gbkey=CDS;gene=tnp;product=transposase for the IS1541 insertion element;protein_id=YP_002348308.1;transl_table=11
NC_003143.1	RefSeq	gene	3817028	3818455	.	-	.	ID=gene3299;Name=lpdA;Dbxref=GeneID:1176234;gbkey=Gene;gene=lpdA;locus_tag=YPO3417
NC_003143.1	RefSeq	CDS	3817028	3818455	.	-	0	ID=cds3140;Name=YP_002348309.1;Parent=gene3299;Note=E3 component of pyruvate and 2-oxoglutarate dehydrogenase complex%3B catalyzes the oxidation of dihydrolipoamide to lipoamide;Dbxref=InterPro:IPR000759,InterPro:IPR000815,InterPro:IPR001100,InterPro:IPR001327,InterPro:IPR004099,InterPro:IPR006258,InterPro:IPR012999,InterPro:IPR013027,UniProtKB%2FTrEMBL:Q7CKE4,Genbank:YP_002348309.1,GeneID:1176234;gbkey=CDS;gene=lpdA;product=dihydrolipoamide dehydrogenase;protein_id=YP_002348309.1;transl_table=11
NC_003143.1	RefSeq	region	3818297	3818329	.	-	.	ID=id2462;Note=PS00076 Pyridine nucleotide-disulphide oxidoreductases class-I active site.;Dbxref=GeneID:1176234;gbkey=misc_feature;gene=lpdA
NC_003143.1	RefSeq	gene	3818758	3820287	.	-	.	ID=gene3300;Name=aceF;Dbxref=GeneID:1176235;gbkey=Gene;gene=aceF;locus_tag=YPO3418
NC_003143.1	RefSeq	CDS	3818758	3820287	.	-	0	ID=cds3141;Name=YP_002348310.1;Parent=gene3300;Dbxref=InterPro:IPR000089,InterPro:IPR001078,InterPro:IPR003016,InterPro:IPR004167,InterPro:IPR006256,InterPro:IPR011053,UniProtKB%2FTrEMBL:Q7CKE5,Genbank:YP_002348310.1,GeneID:1176235;gbkey=CDS;gene=aceF;product=dihydrolipoamide acetyltransferase;protein_id=YP_002348310.1;transl_table=11
NC_003143.1	RefSeq	region	3819820	3819909	.	-	.	ID=id2463;Note=PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site.;Dbxref=GeneID:1176235;gbkey=misc_feature;gene=aceF
NC_003143.1	RefSeq	region	3820126	3820215	.	-	.	ID=id2464;Note=PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site.;Dbxref=GeneID:1176235;gbkey=misc_feature;gene=aceF
NC_003143.1	RefSeq	gene	3820301	3822964	.	-	.	ID=gene3301;Name=aceE;Dbxref=GeneID:1176236;gbkey=Gene;gene=aceE;locus_tag=YPO3419
NC_003143.1	RefSeq	CDS	3820301	3822964	.	-	0	ID=cds3142;Name=YP_002348311.1;Parent=gene3301;Note=E1 component%3B part of pyruvate dehydrogenase%3B forms a complex with DlaT and LpdC;Dbxref=InterPro:IPR004660,InterPro:IPR005474,InterPro:IPR009014,UniProtKB%2FTrEMBL:Q7CKE6,Genbank:YP_002348311.1,GeneID:1176236;gbkey=CDS;gene=aceE;product=pyruvate dehydrogenase subunit E1;protein_id=YP_002348311.1;transl_table=11
NC_003143.1	RefSeq	gene	3823160	3823924	.	-	.	ID=gene3302;Name=pdhR;Dbxref=GeneID:1176237;gbkey=Gene;gene=pdhR;gene_synonym=genA,pdhR;locus_tag=YPO3420
NC_003143.1	RefSeq	CDS	3823160	3823924	.	-	0	ID=cds3143;Name=YP_002348312.1;Parent=gene3302;Note=activates lctPRD operon%3B autoregulates itself through repression of pdhR-aceEF-lpdA operon%3B regulates pyruvate dehydrogenase complex;Dbxref=InterPro:IPR000524,InterPro:IPR011711,UniProtKB%2FTrEMBL:Q0WBM6,Genbank:YP_002348312.1,GeneID:1176237;gbkey=CDS;gene=pdhR;product=transcriptional regulator PdhR;protein_id=YP_002348312.1;transl_table=11
NC_003143.1	RefSeq	region	3823751	3823825	.	-	.	ID=id2465;Note=PS00043 Bacterial regulatory proteins%2C gntR family signature.;Dbxref=GeneID:1176237;gbkey=misc_feature;gene=pdhR
NC_003143.1	RefSeq	region	3823757	3823822	.	-	.	ID=id2466;Note=Predicted helix-turn-helix motif with score 1517 %28%2B4.35 SD%29 at aa 35-56%2C sequence LPERELAKQFDVSRPSLREAIQ;Dbxref=GeneID:1176237;gbkey=misc_feature;gene=pdhR
NC_003143.1	RefSeq	gene	3824787	3826184	.	+	.	ID=gene3303;Name=aroP;Dbxref=GeneID:1176238;gbkey=Gene;gene=aroP;locus_tag=YPO3421
NC_003143.1	RefSeq	CDS	3824787	3826184	.	+	0	ID=cds3144;Name=YP_002348313.1;Parent=gene3303;Dbxref=InterPro:IPR002293,InterPro:IPR004840,InterPro:IPR004841,UniProtKB%2FTrEMBL:Q0WBM5,Genbank:YP_002348313.1,GeneID:1176238;gbkey=CDS;gene=aroP;product=aromatic amino acid transport protein;protein_id=YP_002348313.1;transl_table=11
NC_003143.1	RefSeq	region	3824913	3825005	.	+	.	ID=id2467;Note=PS00218 Amino acid permeases signature.;Dbxref=GeneID:1176238;gbkey=misc_feature;gene=aroP
NC_003143.1	RefSeq	gene	3826602	3827456	.	-	.	ID=gene3304;Name=ampE;Dbxref=GeneID:1176239;gbkey=Gene;gene=ampE;locus_tag=YPO3422
NC_003143.1	RefSeq	CDS	3826602	3827456	.	-	0	ID=cds3145;Name=YP_002348314.1;Parent=gene3304;Note=involved in regulation of beta-lactamase%3B signaling protein;Dbxref=UniProtKB%2FTrEMBL:Q7CKE7,Genbank:YP_002348314.1,GeneID:1176239;gbkey=CDS;gene=ampE;product=regulatory protein AmpE;protein_id=YP_002348314.1;transl_table=11
NC_003143.1	RefSeq	gene	3827746	3828297	.	-	.	ID=gene3305;Name=ampD;Dbxref=GeneID:1176240;gbkey=Gene;gene=ampD;locus_tag=YPO3423
NC_003143.1	RefSeq	CDS	3827746	3828297	.	-	0	ID=cds3146;Name=YP_002348315.1;Parent=gene3305;Dbxref=InterPro:IPR002502,UniProtKB%2FTrEMBL:Q7CKE8,Genbank:YP_002348315.1,GeneID:1176240;gbkey=CDS;gene=ampD;product=N-acetyl-anhydromuranmyl-L-alanine amidase;protein_id=YP_002348315.1;transl_table=11
NC_003143.1	RefSeq	gene	3828410	3829318	.	+	.	ID=gene3306;Name=nadC;Dbxref=GeneID:1176241;gbkey=Gene;gene=nadC;locus_tag=YPO3424
NC_003143.1	RefSeq	CDS	3828410	3829318	.	+	0	ID=cds3147;Name=YP_002348316.1;Parent=gene3306;Note=catalyzes the formation of pyridine-2%2C3-dicarboxylate and 5-phospho-alpha-D-ribose 1-diphosphate from nictinate D-ribonucleotide;Dbxref=InterPro:IPR002638,InterPro:IPR004393,UniProtKB%2FTrEMBL:Q0WBM2,Genbank:YP_002348316.1,GeneID:1176241;gbkey=CDS;gene=nadC;product=quinolinate phosphoribosyltransferase;protein_id=YP_002348316.1;transl_table=11
NC_003143.1	RefSeq	gene	3829521	3829985	.	+	.	ID=gene3307;Name=ppdD;Dbxref=GeneID:1176242;gbkey=Gene;gene=ppdD;locus_tag=YPO3425
NC_003143.1	RefSeq	CDS	3829521	3829985	.	+	0	ID=cds3148;Name=YP_002348317.1;Parent=gene3307;Dbxref=InterPro:IPR001082,InterPro:IPR001120,InterPro:IPR012902,UniProtKB%2FTrEMBL:Q7CKE9,Genbank:YP_002348317.1,GeneID:1176242;gbkey=CDS;gene=ppdD;product=major pilin subunit;protein_id=YP_002348317.1;transl_table=11
NC_003143.1	RefSeq	region	3829551	3829613	.	+	.	ID=id2468;Note=PS00409 Prokaryotic N-terminal methylation site.;Dbxref=GeneID:1176242;gbkey=misc_feature;gene=ppdD
NC_003143.1	RefSeq	region	3829557	3829625	.	+	.	ID=id2469;Note=1 probable transmembrane helix predicted;Dbxref=GeneID:1176242;gbkey=misc_feature;gene=ppdD
NC_003143.1	RefSeq	gene	3829978	3831516	.	+	.	ID=gene3308;Name=hofB;Dbxref=GeneID:1176243;gbkey=Gene;gene=hofB;gene_synonym=hopB;locus_tag=YPO3426
NC_003143.1	RefSeq	CDS	3829978	3831516	.	+	0	ID=cds3149;Name=YP_002348318.1;Parent=gene3308;Dbxref=InterPro:IPR001482,UniProtKB%2FTrEMBL:Q0WBM0,Genbank:YP_002348318.1,GeneID:1176243;gbkey=CDS;gene=hofB;product=hypothetical protein;protein_id=YP_002348318.1;transl_table=11
NC_003143.1	RefSeq	region	3830056	3830079	.	+	.	ID=id2470;Note=PS00017 ATP%2FGTP-binding site motif A %28P-loop%29.;Dbxref=GeneID:1176243;gbkey=misc_feature;gene=hofB
NC_003143.1	RefSeq	region	3830782	3830805	.	+	.	ID=id2471;Note=PS00017 ATP%2FGTP-binding site motif A %28P-loop%29.;Dbxref=GeneID:1176243;gbkey=misc_feature;gene=hofB
NC_003143.1	RefSeq	region	3830959	3831003	.	+	.	ID=id2472;Note=PS00662 Bacterial type II secretion system protein E signature.;Dbxref=GeneID:1176243;gbkey=misc_feature;gene=hofB
NC_003143.1	RefSeq	gene	3831513	3832712	.	+	.	ID=gene3309;Name=hofC;Dbxref=GeneID:1176244;gbkey=Gene;gene=hofC;gene_synonym=hopC;locus_tag=YPO3427
NC_003143.1	RefSeq	CDS	3831513	3832712	.	+	0	ID=cds3150;Name=YP_002348319.1;Parent=gene3309;Dbxref=InterPro:IPR001992,InterPro:IPR003004,UniProtKB%2FTrEMBL:Q7CKF0,Genbank:YP_002348319.1,GeneID:1176244;gbkey=CDS;gene=hofC;product=type IV pilin biogenesis protein;protein_id=YP_002348319.1;transl_table=11
NC_003143.1	RefSeq	region	3831987	3832073	.	+	.	ID=id2473;Note=PS00874 Bacterial type II secretion system protein F signature.;Dbxref=GeneID:1176244;gbkey=misc_feature;gene=hofC
NC_003143.1	RefSeq	gene	3833139	3834182	.	-	.	ID=gene3310;Name=guaC;Dbxref=GeneID:1176245;gbkey=Gene;gene=guaC;locus_tag=YPO3428
NC_003143.1	RefSeq	CDS	3833139	3834182	.	-	0	ID=cds3151;Name=YP_002348320.1;Parent=gene3310;Note=catalyzes the NADPH-dependent deamination of GMP to inosine monophosphate;Dbxref=InterPro:IPR001093,InterPro:IPR005993,UniProtKB%2FTrEMBL:Q0WBL8,Genbank:YP_002348320.1,GeneID:1176245;gbkey=CDS;gene=guaC;product=guanosine 5%27-monophosphate oxidoreductase;protein_id=YP_002348320.1;transl_table=11
NC_003143.1	RefSeq	region	3833619	3833657	.	-	.	ID=id2474;Note=PS00487 IMP dehydrogenase %2F GMP reductase signature.;Dbxref=GeneID:1176245;gbkey=misc_feature;gene=guaC
NC_003143.1	RefSeq	gene	3834478	3835098	.	+	.	ID=gene3311;Name=coaE;Dbxref=GeneID:1176247;gbkey=Gene;gene=coaE;locus_tag=YPO3430
NC_003143.1	RefSeq	CDS	3834478	3835098	.	+	0	ID=cds3152;Name=YP_002348322.1;Parent=gene3311;Note=catalyzes the phosphorylation of the 3%27-hydroxyl group of dephosphocoenzyme A to form coenzyme A%3B involved in coenzyme A biosynthesis;Dbxref=InterPro:IPR000764,InterPro:IPR001977,UniProtKB%2FTrEMBL:Q0WBL6,Genbank:YP_002348322.1,GeneID:1176247;gbkey=CDS;gene=coaE;product=dephospho-CoA kinase;protein_id=YP_002348322.1;transl_table=11
NC_003143.1	RefSeq	region	3834502	3834525	.	+	.	ID=id2475;Note=PS00017 ATP%2FGTP-binding site motif A %28P-loop%29.;Dbxref=GeneID:1176247;gbkey=misc_feature;gene=coaE
NC_003143.1	RefSeq	region	3834664	3834753	.	+	.	ID=id2476;Note=PS01294 Uncharacterized protein family UPF0038 signature.;Dbxref=GeneID:1176247;gbkey=misc_feature;gene=coaE
NC_003143.1	RefSeq	gene	3835095	3835847	.	+	.	ID=gene3312;Name=coaE;Dbxref=GeneID:1176248;gbkey=Gene;gene=coaE;locus_tag=YPO3431
NC_003143.1	RefSeq	CDS	3835095	3835847	.	+	0	ID=cds3153;Name=YP_002348323.1;Parent=gene3312;Dbxref=InterPro:IPR009777,UniProtKB%2FTrEMBL:Q0WBL5,Genbank:YP_002348323.1,GeneID:1176248;gbkey=CDS;product=hypothetical protein;protein_id=YP_002348323.1;transl_table=11
NC_003143.1	RefSeq	gene	3836033	3836239	.	+	.	ID=gene3313;Name=YPO3432;Dbxref=GeneID:1176249;gbkey=Gene;locus_tag=YPO3432
NC_003143.1	RefSeq	CDS	3836033	3836239	.	+	0	ID=cds3154;Name=YP_002348324.1;Parent=gene3313;Dbxref=InterPro:IPR005584,UniProtKB%2FTrEMBL:Q0WBL4,Genbank:YP_002348324.1,GeneID:1176249;gbkey=CDS;product=zinc-binding protein;protein_id=YP_002348324.1;transl_table=11
NC_003143.1	RefSeq	repeat_region	3836321	3836915	.	-	.	ID=id2477;Note=A member of the IS1541 elements carrying an %27A%27 at nucleotide position 315.%7ETruncated insertion sequence:IS200-like;gbkey=repeat_region
NC_003143.1	RefSeq	gene	3836429	3836887	.	-	.	ID=gene3314;Name=tnp;Dbxref=GeneID:1176250;gbkey=Gene;gene=tnp;locus_tag=YPO3433
NC_003143.1	RefSeq	CDS	3836429	3836887	.	-	0	ID=cds3155;Name=YP_002348325.1;Parent=gene3314;Dbxref=InterPro:IPR002686,UniProtKB%2FTrEMBL:Q56938,Genbank:YP_002348325.1,GeneID:1176250;gbkey=CDS;gene=tnp;product=transposase for the IS1541 insertion element;protein_id=YP_002348325.1;transl_table=11
NC_003143.1	RefSeq	repeat_region	3836912	3838865	.	+	.	ID=id2478;Note=insertion sequence:IS100;gbkey=repeat_region
NC_003143.1	RefSeq	repeat_region	3836912	3836939	.	+	.	ID=id2479;Note=IS100 inverted repeat;gbkey=repeat_region
NC_003143.1	RefSeq	gene	3836998	3838020	.	+	.	ID=gene3315;Name=y1093;Dbxref=GeneID:1176251;gbkey=Gene;gene=y1093;gene_synonym=ypmt1;locus_tag=YPO3434
NC_003143.1	RefSeq	CDS	3836998	3838020	.	+	0	ID=cds3156;Name=YP_002348326.1;Parent=gene3315;Dbxref=InterPro:IPR001584,InterPro:IPR006120,InterPro:IPR009057,InterPro:IPR012287,InterPro:IPR012337,UniProtKB%2FTrEMBL:Q7ARN5,Genbank:YP_002348326.1,GeneID:1176251;gbkey=CDS;gene=y1093;product=transposase for insertion sequence IS100;protein_id=YP_002348326.1;transl_table=11
NC_003143.1	RefSeq	region	3837049	3837114	.	+	.	ID=id2480;Note=Predicted helix-turn-helix motif with score 2147 %28%2B6.50 SD%29 at aa 18-39%2C sequence MSSRAIARELGISRNTVKRYLQ;Dbxref=GeneID:1176251;gbkey=misc_feature;gene=y1093
NC_003143.1	RefSeq	gene	3838017	3838799	.	+	.	ID=gene3316;Name=YPO3435;Note=ypmt1.57c;Dbxref=GeneID:1176252;gbkey=Gene;locus_tag=YPO3435
NC_003143.1	RefSeq	CDS	3838017	3838799	.	+	0	ID=cds3157;Name=YP_002348327.1;Parent=gene3316;Dbxref=InterPro:IPR001270,InterPro:IPR002611,InterPro:IPR003593,UniProtKB%2FTrEMBL:Q7ARK4,Genbank:YP_002348327.1,GeneID:1176252;gbkey=CDS;product=transposase%2FIS protein;protein_id=YP_002348327.1;transl_table=11
NC_003143.1	RefSeq	region	3838344	3838367	.	+	.	ID=id2481;Note=PS00017 ATP%2FGTP-binding site motif A %28P-loop%29.;Dbxref=GeneID:1176252;gbkey=misc_feature
NC_003143.1	RefSeq	repeat_region	3838838	3838865	.	-	.	ID=id2482;Note=IS100 inverted repeat;gbkey=repeat_region
NC_003143.1	RefSeq	gene	3838865	3839959	.	-	.	ID=gene3317;Name=YPO3436;Dbxref=GeneID:1176253;gbkey=Gene;locus_tag=YPO3436;pseudo=true
NC_003143.1	RefSeq	region	3838865	3839959	.	-	.	ID=id2483;Note=This CDS is disrupted by the insertion of IS100 element. Its N-terminal region is similar to the N-terminal regions of Neisseria meningitidis hypothetical protein Nma0428 TR:Q9JWD7 %28EMBL:AL162753%29 %28548 aa%29 fasta scores: E%28%29: 0.00011%2C 29.1%25 id in 223 aa%2C and to the N-terminal regions of several DNA mismatch repair proteins;Dbxref=GeneID:1176253;gbkey=misc_feature;pseudo=true
NC_003143.1	RefSeq	gene	3839952	3841862	.	-	.	ID=gene3318;Name=YPO3437;Dbxref=GeneID:1176254;gbkey=Gene;locus_tag=YPO3437
NC_003143.1	RefSeq	CDS	3839952	3841862	.	-	0	ID=cds3158;Name=YP_002348328.1;Parent=gene3318;Dbxref=InterPro:IPR004919,UniProtKB%2FTrEMBL:Q0WBL0,Genbank:YP_002348328.1,GeneID:1176254;gbkey=CDS;product=hypothetical protein;protein_id=YP_002348328.1;transl_table=11
NC_003143.1	RefSeq	gene	3842016	3843275	.	-	.	ID=gene3319;Name=intB;Dbxref=GeneID:1176255;gbkey=Gene;gene=intB;locus_tag=YPO3438
NC_003143.1	RefSeq	CDS	3842016	3843275	.	-	0	ID=cds3159;Name=YP_002348329.1;Parent=gene3319;Dbxref=InterPro:IPR002104,InterPro:IPR011010,InterPro:IPR013762,UniProtKB%2FTrEMBL:Q0WBK9,Genbank:YP_002348329.1,GeneID:1176255;gbkey=CDS;gene=intB;product=integrase;protein_id=YP_002348329.1;transl_table=11
NC_003143.1	RefSeq	gene	3843474	3843558	.	-	.	ID=gene3320;Name=YPt_50;Dbxref=GeneID:1176256;gbkey=Gene;locus_tag=YPt_50
NC_003143.1	RefSeq	tRNA	3843474	3843558	.	-	.	ID=rna69;Parent=gene3320;Note=tRNA Leu anticodon CAA%2C Cove score 74.86;Dbxref=GeneID:1176256;gbkey=tRNA;product=tRNA-Leu
NC_003143.1	RefSeq	exon	3843474	3843558	.	-	.	ID=id2484;Parent=rna69;Note=tRNA Leu anticodon CAA%2C Cove score 74.86;Dbxref=GeneID:1176256;gbkey=tRNA;product=tRNA-Leu
NC_003143.1	RefSeq	gene	3843663	3844739	.	-	.	ID=gene3321;Name=YPO3439;Dbxref=GeneID:1176257;gbkey=Gene;locus_tag=YPO3439
NC_003143.1	RefSeq	CDS	3843663	3844739	.	-	0	ID=cds3160;Name=YP_002348330.1;Parent=gene3321;Dbxref=InterPro:IPR005495,UniProtKB%2FTrEMBL:Q7CKF3,Genbank:YP_002348330.1,GeneID:1176257;gbkey=CDS;product=hypothetical protein;protein_id=YP_002348330.1;transl_table=11
NC_003143.1	RefSeq	gene	3844739	3845833	.	-	.	ID=gene3322;Name=YPO3440;Dbxref=GeneID:1176258;gbkey=Gene;locus_tag=YPO3440
NC_003143.1	RefSeq	CDS	3844739	3845833	.	-	0	ID=cds3161;Name=YP_002348331.1;Parent=gene3322;Dbxref=InterPro:IPR005495,UniProtKB%2FTrEMBL:Q7CKF4,Genbank:YP_002348331.1,GeneID:1176258;gbkey=CDS;product=hypothetical protein;protein_id=YP_002348331.1;transl_table=11
NC_003143.1	RefSeq	gene	3846113	3847624	.	+	.	ID=gene3323;Name=pepA;Dbxref=GeneID:1176259;gbkey=Gene;gene=pepA;gene_synonym=xerB;locus_tag=YPO3441
NC_003143.1	RefSeq	CDS	3846113	3847624	.	+	0	ID=cds3162;Name=YP_002348332.1;Parent=gene3323;Note=catalyzes the removal of N-terminal amino acids preferably leucine from various peptides;Dbxref=InterPro:IPR000819,InterPro:IPR008283,InterPro:IPR011356,UniProtKB%2FTrEMBL:Q0WBK6,Genbank:YP_002348332.1,GeneID:1176259;gbkey=CDS;gene=pepA;product=leucyl aminopeptidase;protein_id=YP_002348332.1;transl_table=11
NC_003143.1	RefSeq	region	3847160	3847183	.	+	.	ID=id2485;Note=PS00631 Cytosol aminopeptidase signature.;Dbxref=GeneID:1176259;gbkey=misc_feature;gene=pepA
NC_003143.1	RefSeq	gene	3847775	3848224	.	+	.	ID=gene3324;Name=holC;Dbxref=GeneID:1176260;gbkey=Gene;gene=holC;locus_tag=YPO3442
NC_003143.1	RefSeq	CDS	3847775	3848224	.	+	0	ID=cds3163;Name=YP_002348333.1;Parent=gene3324;Note=binds to single-strand binding %28SSB%29 protein and acts as a bridge between the DnaX clamp loader complex and the SSB;Dbxref=InterPro:IPR007459,UniProtKB%2FTrEMBL:Q74X22,Genbank:YP_002348333.1,GeneID:1176260;gbkey=CDS;gene=holC;product=DNA polymerase III subunit chi;protein_id=YP_002348333.1;transl_table=11
NC_003143.1	RefSeq	gene	3848237	3851134	.	+	.	ID=gene3325;Name=valS;Dbxref=GeneID:1176261;gbkey=Gene;gene=valS;locus_tag=YPO3443
NC_003143.1	RefSeq	CDS	3848237	3851134	.	+	0	ID=cds3164;Name=YP_002348334.1;Parent=gene3325;Note=valine--tRNA ligase%3B ValRS%3B converts valine ATP and tRNA%28Val%29 to AMP PPi and valyl-tRNA%28Val%29%3B class-I aminoacyl-tRNA synthetase type 1 subfamily%3B has a posttransfer editing process to hydrolyze mischarged Thr-tRNA%28Val%29 which is done by the editing domain;Dbxref=InterPro:IPR001412,InterPro:IPR002300,InterPro:IPR002303,InterPro:IPR009008,InterPro:IPR009080,InterPro:IPR010978,InterPro:IPR013155,UniProtKB%2FTrEMBL:Q0WBK4,Genbank:YP_002348334.1,GeneID:1176261;gbkey=CDS;gene=valS;product=valyl-tRNA synthetase;protein_id=YP_002348334.1;transl_table=11
NC_003143.1	RefSeq	region	3848402	3848437	.	+	.	ID=id2486;Note=PS00178 Aminoacyl-transfer RNA synthetases class-I signature.;Dbxref=GeneID:1176261;gbkey=misc_feature;gene=valS
NC_003143.1	RefSeq	gene	3851277	3851780	.	+	.	ID=gene3326;Name=YPO3444;Dbxref=GeneID:1176262;gbkey=Gene;locus_tag=YPO3444
NC_003143.1	RefSeq	CDS	3851277	3851780	.	+	0	ID=cds3165;Name=YP_002348335.1;Parent=gene3326;Dbxref=InterPro:IPR000169,InterPro:IPR000182,UniProtKB%2FTrEMBL:Q7CKF6,Genbank:YP_002348335.1,GeneID:1176262;gbkey=CDS;product=acetyltransferase;protein_id=YP_002348335.1;transl_table=11
NC_003143.1	RefSeq	region	3851628	3851663	.	+	.	ID=id2487;Note=PS00139 Eukaryotic thiol %28cysteine%29 proteases cysteine active site.;Dbxref=GeneID:1176262;gbkey=misc_feature
NC_003143.1	RefSeq	gene	3852287	3852718	.	-	.	ID=gene3327;Name=YPO3445;Dbxref=GeneID:1176263;gbkey=Gene;locus_tag=YPO3445
NC_003143.1	RefSeq	CDS	3852287	3852718	.	-	0	ID=cds3166;Name=YP_002348336.1;Parent=gene3327;Dbxref=InterPro:IPR009671,UniProtKB%2FTrEMBL:Q7CKF7,Genbank:YP_002348336.1,GeneID:1176263;gbkey=CDS;product=hypothetical protein;protein_id=YP_002348336.1;transl_table=11
NC_003143.1	RefSeq	gene	3852930	3853937	.	+	.	ID=gene3328;Name=argI;Dbxref=GeneID:1176264;gbkey=Gene;gene=argI;locus_tag=YPO3446
NC_003143.1	RefSeq	CDS	3852930	3853937	.	+	0	ID=cds3167;Name=YP_002348337.1;Parent=gene3328;Note=catalyzes the formation of L-citrulline from carbamoyl phosphate and L-ornithine in arginine biosynthesis and degradation%3B E. coli K12 has two genes%2C argF and argI%2C capable of producing functional ornithine carbamoyltransferase. When both are active in the same cell%2C the two gene products form a family of four hybrid trimeric isoenzymes designated%2C FFF%2C FFI%2C FII%2C and III.;Dbxref=InterPro:IPR002292,InterPro:IPR006130,InterPro:IPR006131,InterPro:IPR006132,UniProtKB%2FTrEMBL:Q0WBK1,Genbank:YP_002348337.1,GeneID:1176264;gbkey=CDS;gene=argI;product=ornithine carbamoyltransferase subunit I;protein_id=YP_002348337.1;transl_table=11
NC_003143.1	RefSeq	region	3853083	3853106	.	+	.	ID=id2488;Note=PS00097 Aspartate and ornithine carbamoyltransferases signature.;Dbxref=GeneID:1176264;gbkey=misc_feature;gene=argI
NC_003143.1	RefSeq	gene	3854244	3854702	.	-	.	ID=gene3329;Name=YPO3447;Dbxref=GeneID:1176265;gbkey=Gene;locus_tag=YPO3447
NC_003143.1	RefSeq	CDS	3854244	3854702	.	-	0	ID=cds3168;Name=YP_002348338.1;Parent=gene3329;Dbxref=InterPro:IPR004375,UniProtKB%2FTrEMBL:Q7CKF8,Genbank:YP_002348338.1,GeneID:1176265;gbkey=CDS;product=hypothetical protein;protein_id=YP_002348338.1;transl_table=11
NC_003143.1	RefSeq	gene	3855341	3856908	.	+	.	ID=gene3330;Name=YPO3448;Dbxref=GeneID:1176266;gbkey=Gene;locus_tag=YPO3448;pseudo=true
NC_003143.1	RefSeq	gene	3857004	3858053	.	+	.	ID=gene3331;Name=YPO3450;Dbxref=GeneID:1176267;gbkey=Gene;locus_tag=YPO3450
NC_003143.1	RefSeq	CDS	3857004	3858053	.	+	0	ID=cds3169;Name=YP_002348339.1;Parent=gene3331;Dbxref=InterPro:IPR000515,UniProtKB%2FTrEMBL:Q7CKF9,Genbank:YP_002348339.1,GeneID:1176267;gbkey=CDS;product=transporter%2C permease;protein_id=YP_002348339.1;transl_table=11
NC_003143.1	RefSeq	gene	3858072	3858908	.	+	.	ID=gene3332;Name=YPO3451;Dbxref=GeneID:1176268;gbkey=Gene;locus_tag=YPO3451
NC_003143.1	RefSeq	CDS	3858072	3858908	.	+	0	ID=cds3170;Name=YP_002348340.1;Parent=gene3332;Dbxref=InterPro:IPR000515,UniProtKB%2FTrEMBL:Q7CKG0,Genbank:YP_002348340.1,GeneID:1176268;gbkey=CDS;product=transporter%2C permease;protein_id=YP_002348340.1;transl_table=11
NC_003143.1	RefSeq	gene	3858901	3859779	.	+	.	ID=gene3333;Name=YPO3452;Dbxref=GeneID:1176269;gbkey=Gene;locus_tag=YPO3452
NC_003143.1	RefSeq	CDS	3858901	3859779	.	+	0	ID=cds3171;Name=YP_002348341.1;Parent=gene3333;Dbxref=InterPro:IPR003439,InterPro:IPR003593,UniProtKB%2FTrEMBL:Q0WBJ7,Genbank:YP_002348341.1,GeneID:1176269;gbkey=CDS;product=ABC transporter ATP-binding protein;protein_id=YP_002348341.1;transl_table=11
NC_003143.1	RefSeq	region	3859009	3859032	.	+	.	ID=id2489;Note=PS00017 ATP%2FGTP-binding site motif A %28P-loop%29.;Dbxref=GeneID:1176269;gbkey=misc_feature
NC_003143.1	RefSeq	region	3859273	3859296	.	+	.	ID=id2490;Note=PS00881 Protein splicing signature.;Dbxref=GeneID:1176269;gbkey=misc_feature
NC_003143.1	RefSeq	gene	3859781	3860482	.	+	.	ID=gene3334;Name=YPO3453;Dbxref=GeneID:1176270;gbkey=Gene;locus_tag=YPO3453
NC_003143.1	RefSeq	CDS	3859781	3860482	.	+	0	ID=cds3172;Name=YP_002348342.1;Parent=gene3334;Dbxref=InterPro:IPR003439,InterPro:IPR003593,UniProtKB%2FTrEMBL:Q0WBJ6,Genbank:YP_002348342.1,GeneID:1176270;gbkey=CDS;product=ABC transporter ATP-binding protein;protein_id=YP_002348342.1;transl_table=11
NC_003143.1	RefSeq	region	3859883	3859906	.	+	.	ID=id2491;Note=PS00017 ATP%2FGTP-binding site motif A %28P-loop%29.;Dbxref=GeneID:1176270;gbkey=misc_feature
NC_003143.1	RefSeq	region	3860192	3860236	.	+	.	ID=id2492;Note=PS00211 ABC transporters family signature.;Dbxref=GeneID:1176270;gbkey=misc_feature
NC_003143.1	RefSeq	gene	3860916	3863054	.	+	.	ID=gene3335;Name=nrdD;Dbxref=GeneID:1176271;gbkey=Gene;gene=nrdD;locus_tag=YPO3454
NC_003143.1	RefSeq	CDS	3860916	3863054	.	+	0	ID=cds3173;Name=YP_002348343.1;Parent=gene3335;Note=Catalyzes the reduction of nucleoside 5%27-triphosphates to 2%27-deoxynucleoside 5%27-triphosphates;Dbxref=InterPro:IPR001150,InterPro:IPR005144,InterPro:IPR012833,UniProtKB%2FTrEMBL:Q7CKG1,Genbank:YP_002348343.1,GeneID:1176271;gbkey=CDS;gene=nrdD;product=anaerobic ribonucleoside triphosphate reductase;protein_id=YP_002348343.1;transl_table=11
NC_003143.1	RefSeq	region	3862941	3862967	.	+	.	ID=id2493;Note=PS00850 Glycine radical signature.;Dbxref=GeneID:1176271;gbkey=misc_feature;gene=nrdD
NC_003143.1	RefSeq	gene	3863261	3863695	.	+	.	ID=gene3336;Name=nrdG;Dbxref=GeneID:1176272;gbkey=Gene;gene=nrdG;locus_tag=YPO3455
NC_003143.1	RefSeq	CDS	3863261	3863695	.	+	0	ID=cds3174;Name=YP_002348344.1;Parent=gene3336;Note=activates anaerobic ribonucleoside-triphosphate reductase under anaerobic conditions;Dbxref=InterPro:IPR001989,InterPro:IPR012837,UniProtKB%2FTrEMBL:Q7CKG2,Genbank:YP_002348344.1,GeneID:1176272;gbkey=CDS;gene=nrdG;product=anaerobic ribonucleotide reductase-activating protein;protein_id=YP_002348344.1;transl_table=11
NC_003143.1	RefSeq	region	3863270	3863335	.	+	.	ID=id2494;Note=PS01087 Radical activating enzymes signature.;Dbxref=GeneID:1176272;gbkey=misc_feature;gene=nrdG
NC_003143.1	RefSeq	gene	3864023	3864748	.	+	.	ID=gene3337;Name=phnF;Dbxref=GeneID:1176273;gbkey=Gene;gene=phnF;locus_tag=YPO3456
NC_003143.1	RefSeq	CDS	3864023	3864748	.	+	0	ID=cds3175;Name=YP_002348345.1;Parent=gene3337;Note=may be involved in phosphonate uptake and biodegradation;Dbxref=InterPro:IPR000524,InterPro:IPR011663,InterPro:IPR012702,UniProtKB%2FTrEMBL:Q7CKG3,Genbank:YP_002348345.1,GeneID:1176273;gbkey=CDS;gene=phnF;product=phosphonate metabolism transcriptional regulator PhnF;protein_id=YP_002348345.1;transl_table=11
NC_003143.1	RefSeq	region	3864125	3864199	.	+	.	ID=id2495;Note=PS00043 Bacterial regulatory proteins%2C gntR family signature.;Dbxref=GeneID:1176273;gbkey=misc_feature;gene=phnF
NC_003143.1	RefSeq	region	3864128	3864193	.	+	.	ID=id2496;Note=Predicted helix-turn-helix motif with score 1194 %28%2B3.25 SD%29 at aa 36-57%2C sequence PSEQQLADRYQVNRHTLRRAVD;Dbxref=GeneID:1176273;gbkey=misc_feature;gene=phnF
NC_003143.1	RefSeq	gene	3864749	3865225	.	+	.	ID=gene3338;Name=phnG;Dbxref=GeneID:1176274;gbkey=Gene;gene=phnG;locus_tag=YPO3457
NC_003143.1	RefSeq	CDS	3864749	3865225	.	+	0	ID=cds3176;Name=YP_002348346.1;Parent=gene3338;Dbxref=InterPro:IPR009609,UniProtKB%2FTrEMBL:Q7CKG4,Genbank:YP_002348346.1,GeneID:1176274;gbkey=CDS;gene=phnG;product=PhnG protein;protein_id=YP_002348346.1;transl_table=11
NC_003143.1	RefSeq	gene	3865225	3865851	.	+	.	ID=gene3339;Name=phnH;Dbxref=GeneID:1176275;gbkey=Gene;gene=phnH;locus_tag=YPO3458
NC_003143.1	RefSeq	CDS	3865225	3865851	.	+	0	ID=cds3177;Name=YP_002348347.1;Parent=gene3339;Dbxref=InterPro:IPR008772,UniProtKB%2FTrEMBL:Q0WBJ1,Genbank:YP_002348347.1,GeneID:1176275;gbkey=CDS;gene=phnH;product=carbon-phosphorus lyase complex protein;protein_id=YP_002348347.1;transl_table=11
NC_003143.1	RefSeq	gene	3865851	3867029	.	+	.	ID=gene3340;Name=phnI;Dbxref=GeneID:1176276;gbkey=Gene;gene=phnI;locus_tag=YPO3459
NC_003143.1	RefSeq	CDS	3865851	3867029	.	+	0	ID=cds3178;Name=YP_002348348.1;Parent=gene3340;Dbxref=InterPro:IPR008773,UniProtKB%2FTrEMBL:Q74X37,Genbank:YP_002348348.1,GeneID:1176276;gbkey=CDS;gene=phnI;product=PhnI protein;protein_id=YP_002348348.1;transl_table=11
NC_003143.1	RefSeq	gene	3867022	3867903	.	+	.	ID=gene3341;Name=phnJ;Dbxref=GeneID:1176277;gbkey=Gene;gene=phnJ;locus_tag=YPO3460
NC_003143.1	RefSeq	CDS	3867022	3867903	.	+	0	ID=cds3179;Name=YP_002348349.1;Parent=gene3341;Dbxref=InterPro:IPR010306,UniProtKB%2FTrEMBL:Q7CKG5,Genbank:YP_002348349.1,GeneID:1176277;gbkey=CDS;gene=phnJ;product=PhnJ protein;protein_id=YP_002348349.1;transl_table=11
NC_003143.1	RefSeq	gene	3867903	3868694	.	+	.	ID=gene3342;Name=phnK;Dbxref=GeneID:1176278;gbkey=Gene;gene=phnK;locus_tag=YPO3461
NC_003143.1	RefSeq	CDS	3867903	3868694	.	+	0	ID=cds3180;Name=YP_002348350.1;Parent=gene3342;Dbxref=InterPro:IPR003439,InterPro:IPR003593,InterPro:IPR012700,InterPro:IPR013563,UniProtKB%2FTrEMBL:Q0WBI8,Genbank:YP_002348350.1,GeneID:1176278;gbkey=CDS;gene=phnK;product=phosphonate C-P lyase system protein PhnK;protein_id=YP_002348350.1;transl_table=11
NC_003143.1	RefSeq	region	3868032	3868055	.	+	.	ID=id2497;Note=PS00017 ATP%2FGTP-binding site motif A %28P-loop%29.;Dbxref=GeneID:1176278;gbkey=misc_feature;gene=phnK
NC_003143.1	RefSeq	region	3868371	3868415	.	+	.	ID=id2498;Note=PS00211 ABC transporters family signature.;Dbxref=GeneID:1176278;gbkey=misc_feature;gene=phnK
NC_003143.1	RefSeq	gene	3869083	3869802	.	+	.	ID=gene3343;Name=phnL;Dbxref=GeneID:1176279;gbkey=Gene;gene=phnL;locus_tag=YPO3462
NC_003143.1	RefSeq	CDS	3869083	3869802	.	+	0	ID=cds3181;Name=YP_002348351.1;Parent=gene3343;Dbxref=InterPro:IPR003439,InterPro:IPR003593,InterPro:IPR012701,UniProtKB%2FTrEMBL:Q7CKG6,Genbank:YP_002348351.1,GeneID:1176279;gbkey=CDS;gene=phnL;product=phosphonates transport ATP-binding protein;protein_id=YP_002348351.1;transl_table=11
NC_003143.1	RefSeq	region	3869215	3869238	.	+	.	ID=id2499;Note=PS00017 ATP%2FGTP-binding site motif A %28P-loop%29.;Dbxref=GeneID:1176279;gbkey=misc_feature;gene=phnL
NC_003143.1	RefSeq	region	3869542	3869586	.	+	.	ID=id2500;Note=PS00211 ABC transporters family signature.;Dbxref=GeneID:1176279;gbkey=misc_feature;gene=phnL
NC_003143.1	RefSeq	gene	3869799	3870935	.	+	.	ID=gene3344;Name=phnM;Dbxref=GeneID:1176280;gbkey=Gene;gene=phnM;locus_tag=YPO3463
NC_003143.1	RefSeq	CDS	3869799	3870935	.	+	0	ID=cds3182;Name=YP_002348352.1;Parent=gene3344;Dbxref=InterPro:IPR011059,InterPro:IPR011550,InterPro:IPR012696,InterPro:IPR013108,UniProtKB%2FTrEMBL:Q7CKG7,Genbank:YP_002348352.1,GeneID:1176280;gbkey=CDS;gene=phnM;product=PhnM protein;protein_id=YP_002348352.1;transl_table=11
NC_003143.1	RefSeq	gene	3870935	3871516	.	+	.	ID=gene3345;Name=phnN;Dbxref=GeneID:1176281;gbkey=Gene;gene=phnN;locus_tag=YPO3464
NC_003143.1	RefSeq	CDS	3870935	3871516	.	+	0	ID=cds3183;Name=YP_002348353.1;Parent=gene3345;Dbxref=InterPro:IPR008144,InterPro:IPR008145,InterPro:IPR012699,UniProtKB%2FTrEMBL:Q7CKG8,Genbank:YP_002348353.1,GeneID:1176281;gbkey=CDS;gene=phnN;product=ribose 1%2C5-bisphosphokinase;protein_id=YP_002348353.1;transl_table=11
NC_003143.1	RefSeq	gene	3871507	3872259	.	+	.	ID=gene3346;Name=phnP;Dbxref=GeneID:1176282;gbkey=Gene;gene=phnP;locus_tag=YPO3465
NC_003143.1	RefSeq	CDS	3871507	3872259	.	+	0	ID=cds3184;Name=YP_002348354.1;Parent=gene3346;Note=required for the use of phosphonates and phosphite as phosphorus sources;Dbxref=InterPro:IPR000209,InterPro:IPR001279,UniProtKB%2FTrEMBL:Q7CKG9,Genbank:YP_002348354.1,GeneID:1176282;gbkey=CDS;gene=phnP;product=carbon-phosphorus lyase complex accessory protein;protein_id=YP_002348354.1;transl_table=11
NC_003143.1	RefSeq	region	3871648	3871683	.	+	.	ID=id2501;Note=PS00136 Serine proteases%2C subtilase family%2C aspartic acid active site.;Dbxref=GeneID:1176282;gbkey=misc_feature;gene=phnP
NC_003143.1	RefSeq	gene	3872272	3872910	.	-	.	ID=gene3347;Name=YPO3466;Dbxref=GeneID:1176283;gbkey=Gene;locus_tag=YPO3466
NC_003143.1	RefSeq	CDS	3872272	3872910	.	-	0	ID=cds3185;Name=YP_002348355.1;Parent=gene3347;Dbxref=InterPro:IPR000534,UniProtKB%2FTrEMBL:Q7CKH0,Genbank:YP_002348355.1,GeneID:1176283;gbkey=CDS;product=hypothetical protein;protein_id=YP_002348355.1;transl_table=11
NC_003143.1	RefSeq	gene	3873062	3873505	.	-	.	ID=gene3348;Name=YPO3467;Dbxref=GeneID:1176284;gbkey=Gene;locus_tag=YPO3467
NC_003143.1	RefSeq	CDS	3873062	3873505	.	-	0	ID=cds3186;Name=YP_002348356.1;Parent=gene3348;Dbxref=InterPro:IPR009002,InterPro:IPR011194,UniProtKB%2FTrEMBL:Q0WBI2,Genbank:YP_002348356.1,GeneID:1176284;gbkey=CDS;product=hypothetical protein;protein_id=YP_002348356.1;transl_table=11
NC_003143.1	RefSeq	gene	3873604	3874770	.	-	.	ID=gene3349;Name=YPO3468;Dbxref=GeneID:1176285;gbkey=Gene;locus_tag=YPO3468
NC_003143.1	RefSeq	CDS	3873604	3874770	.	-	0	ID=cds3187;Name=YP_002348357.1;Parent=gene3349;Note=no significant database hits;Dbxref=InterPro:IPR008929,UniProtKB%2FTrEMBL:Q7CKH1,Genbank:YP_002348357.1,GeneID:1176285;gbkey=CDS;product=hypothetical protein;protein_id=YP_002348357.1;transl_table=11
NC_003143.1	RefSeq	gene	3874785	3875879	.	-	.	ID=gene3350;Name=YPO3469;Dbxref=GeneID:1176286;gbkey=Gene;locus_tag=YPO3469
NC_003143.1	RefSeq	CDS	3874785	3875879	.	-	0	ID=cds3188;Name=YP_002348358.1;Parent=gene3350;Dbxref=InterPro:IPR003439,InterPro:IPR003593,InterPro:IPR008995,InterPro:IPR012340,InterPro:IPR013611,UniProtKB%2FTrEMBL:Q7CKH2,Genbank:YP_002348358.1,GeneID:1176286;gbkey=CDS;product=sugar ABC transporter ATP-binding protein;protein_id=YP_002348358.1;transl_table=11
NC_003143.1	RefSeq	region	3875436	3875480	.	-	.	ID=id2502;Note=PS00211 ABC transporters family signature.;Dbxref=GeneID:1176286;gbkey=misc_feature
NC_003143.1	RefSeq	region	3875751	3875774	.	-	.	ID=id2503;Note=PS00017 ATP%2FGTP-binding site motif A %28P-loop%29.;Dbxref=GeneID:1176286;gbkey=misc_feature
NC_003143.1	RefSeq	gene	3875891	3876730	.	-	.	ID=gene3351;Name=YPO3470;Dbxref=GeneID:1176287;gbkey=Gene;locus_tag=YPO3470
NC_003143.1	RefSeq	CDS	3875891	3876730	.	-	0	ID=cds3189;Name=YP_002348359.1;Parent=gene3351;Dbxref=InterPro:IPR000515,UniProtKB%2FTrEMBL:Q7CKH3,Genbank:YP_002348359.1,GeneID:1176287;gbkey=CDS;product=sugar transport system permease;protein_id=YP_002348359.1;transl_table=11
NC_003143.1	RefSeq	region	3876155	3876241	.	-	.	ID=id2504;Note=PS00402 Binding-protein-dependent transport systems inner membrane comp. sign.;Dbxref=GeneID:1176287;gbkey=misc_feature
NC_003143.1	RefSeq	gene	3876749	3877633	.	-	.	ID=gene3352;Name=YPO3471;Dbxref=GeneID:1176288;gbkey=Gene;locus_tag=YPO3471
NC_003143.1	RefSeq	CDS	3876749	3877633	.	-	0	ID=cds3190;Name=YP_002348360.1;Parent=gene3352;Dbxref=InterPro:IPR000515,UniProtKB%2FTrEMBL:Q7CKH4,Genbank:YP_002348360.1,GeneID:1176288;gbkey=CDS;product=sugar transport system permease;protein_id=YP_002348360.1;transl_table=11
NC_003143.1	RefSeq	gene	3877641	3878954	.	-	.	ID=gene3353;Name=YPO3472;Dbxref=GeneID:1176289;gbkey=Gene;locus_tag=YPO3472
NC_003143.1	RefSeq	CDS	3877641	3878954	.	-	0	ID=cds3191;Name=YP_002348361.1;Parent=gene3353;Dbxref=InterPro:IPR006059,UniProtKB%2FTrEMBL:Q7CKH5,Genbank:YP_002348361.1,GeneID:1176289;gbkey=CDS;product=sugar binding protein;protein_id=YP_002348361.1;transl_table=11
NC_003143.1	RefSeq	gene	3879512	3880738	.	+	.	ID=gene3354;Name=YPO3473;Dbxref=GeneID:1176290;gbkey=Gene;locus_tag=YPO3473
NC_003143.1	RefSeq	CDS	3879512	3880738	.	+	0	ID=cds3192;Name=YP_002348362.1;Parent=gene3354;Note=no significant database matches;Dbxref=InterPro:IPR008929,UniProtKB%2FTrEMBL:Q74X50,Genbank:YP_002348362.1,GeneID:1176290;gbkey=CDS;product=hypothetical protein;protein_id=YP_002348362.1;transl_table=11
NC_003143.1	RefSeq	gene	3880762	3882780	.	+	.	ID=gene3355;Name=YPO3474;Dbxref=GeneID:1176291;gbkey=Gene;locus_tag=YPO3474
NC_003143.1	RefSeq	CDS	3880762	3882780	.	+	0	ID=cds3193;Name=YP_002348363.1;Parent=gene3355;Note=no significant database hits;Dbxref=InterPro:IPR008929,InterPro:IPR012480,UniProtKB%2FTrEMBL:Q74X51,Genbank:YP_002348363.1,GeneID:1176291;gbkey=CDS;product=hypothetical protein;protein_id=YP_002348363.1;transl_table=11
NC_003143.1	RefSeq	gene	3883011	3883298	.	+	.	ID=gene3356;Name=YPO3475;Dbxref=GeneID:1176292;gbkey=Gene;locus_tag=YPO3475
NC_003143.1	RefSeq	CDS	3883011	3883298	.	+	0	ID=cds3194;Name=YP_002348364.1;Parent=gene3356;Dbxref=InterPro:IPR000305,UniProtKB%2FTrEMBL:Q0WBH4,Genbank:YP_002348364.1,GeneID:1176292;gbkey=CDS;product=GIY-YIG nuclease superfamily protein;protein_id=YP_002348364.1;transl_table=11
NC_003143.1	RefSeq	gene	3883473	3883979	.	-	.	ID=gene3357;Name=YPO3476;Dbxref=GeneID:1176293;gbkey=Gene;locus_tag=YPO3476
NC_003143.1	RefSeq	CDS	3883473	3883979	.	-	0	ID=cds3195;Name=YP_002348365.1;Parent=gene3357;Dbxref=InterPro:IPR000182,UniProtKB%2FTrEMBL:Q7CKH6,Genbank:YP_002348365.1,GeneID:1176293;gbkey=CDS;product=acetyltransferase;protein_id=YP_002348365.1;transl_table=11
NC_003143.1	RefSeq	gene	3883973	3884494	.	-	.	ID=gene3358;Name=YPO3477;Dbxref=GeneID:1176294;gbkey=Gene;locus_tag=YPO3477
NC_003143.1	RefSeq	CDS	3883973	3884494	.	-	0	ID=cds3196;Name=YP_002348366.1;Parent=gene3358;Dbxref=InterPro:IPR003033,UniProtKB%2FTrEMBL:Q0WBH2,Genbank:YP_002348366.1,GeneID:1176294;gbkey=CDS;product=lipid carrier protein;protein_id=YP_002348366.1;transl_table=11
NC_003143.1	RefSeq	gene	3884575	3884700	.	+	.	ID=gene3359;Name=YPO3478;Dbxref=GeneID:1176295;gbkey=Gene;locus_tag=YPO3478
NC_003143.1	RefSeq	CDS	3884575	3884700	.	+	0	ID=cds3197;Name=YP_002348367.1;Parent=gene3359;Note=doubtful CDS with no significant database hits. Very low %25G%2BC;Dbxref=UniProtKB%2FTrEMBL:Q74X54,Genbank:YP_002348367.1,GeneID:1176295;gbkey=CDS;product=hypothetical protein;protein_id=YP_002348367.1;transl_table=11
NC_003143.1	RefSeq	gene	3884810	3885805	.	+	.	ID=gene3360;Name=YPO3479;Dbxref=GeneID:1176296;gbkey=Gene;locus_tag=YPO3479
NC_003143.1	RefSeq	CDS	3884810	3885805	.	+	0	ID=cds3198;Name=YP_002348368.1;Parent=gene3360;Dbxref=InterPro:IPR001539,UniProtKB%2FTrEMBL:Q7CKH7,Genbank:YP_002348368.1,GeneID:1176296;gbkey=CDS;product=protease;protein_id=YP_002348368.1;transl_table=11
NC_003143.1	RefSeq	region	3885290	3885346	.	+	.	ID=id2505;Note=PS01276 Peptidase family U32 signature.;Dbxref=GeneID:1176296;gbkey=misc_feature
NC_003143.1	RefSeq	gene	3885817	3886695	.	+	.	ID=gene3361;Name=YPO3480;Dbxref=GeneID:1176297;gbkey=Gene;locus_tag=YPO3480
NC_003143.1	RefSeq	CDS	3885817	3886695	.	+	0	ID=cds3199;Name=YP_002348369.1;Parent=gene3361;Dbxref=InterPro:IPR001539,UniProtKB%2FTrEMBL:Q0WBG9,Genbank:YP_002348369.1,GeneID:1176297;gbkey=CDS;product=hypothetical protein;protein_id=YP_002348369.1;transl_table=11
NC_003143.1	RefSeq	gene	3886836	3888242	.	-	.	ID=gene3362;Name=ibeB;Dbxref=GeneID:1176298;gbkey=Gene;gene=ibeB;locus_tag=YPO3481
NC_003143.1	RefSeq	CDS	3886836	3888242	.	-	0	ID=cds3200;Name=YP_002348370.1;Parent=gene3362;Dbxref=InterPro:IPR003423,InterPro:IPR010131,UniProtKB%2FTrEMBL:Q7CKH8,Genbank:YP_002348370.1,GeneID:1176298;gbkey=CDS;gene=ibeB;product=outer membrane efflux lipoprotein;protein_id=YP_002348370.1;transl_table=11
NC_003143.1	RefSeq	region	3888192	3888224	.	-	.	ID=id2506;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site.;Dbxref=GeneID:1176298;gbkey=misc_feature;gene=ibeB
NC_003143.1	RefSeq	gene	3888244	3891369	.	-	.	ID=gene3363;Name=YPO3482;Dbxref=GeneID:1176299;gbkey=Gene;locus_tag=YPO3482
NC_003143.1	RefSeq	CDS	3888244	3891369	.	-	0	ID=cds3201;Name=YP_002348371.1;Parent=gene3363;Dbxref=InterPro:IPR001036,InterPro:IPR004764,UniProtKB%2FTrEMBL:Q7CKH9,Genbank:YP_002348371.1,GeneID:1176299;gbkey=CDS;product=multidrug efflux protein;protein_id=YP_002348371.1;transl_table=11
NC_003143.1	RefSeq	gene	3891373	3892533	.	-	.	ID=gene3364;Name=YPO3483;Dbxref=GeneID:1176300;gbkey=Gene;locus_tag=YPO3483
NC_003143.1	RefSeq	CDS	3891373	3892533	.	-	0	ID=cds3202;Name=YP_002348372.1;Parent=gene3364;Dbxref=InterPro:IPR006143,UniProtKB%2FTrEMBL:Q7CKI0,Genbank:YP_002348372.1,GeneID:1176300;gbkey=CDS;product=multidrug efflux protein;protein_id=YP_002348372.1;transl_table=11
NC_003143.1	RefSeq	region	3892483	3892515	.	-	.	ID=id2507;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site.;Dbxref=GeneID:1176300;gbkey=misc_feature
NC_003143.1	RefSeq	gene	3893041	3894096	.	+	.	ID=gene3365;Name=YPO3484;Dbxref=GeneID:1176301;gbkey=Gene;locus_tag=YPO3484
NC_003143.1	RefSeq	CDS	3893041	3894096	.	+	0	ID=cds3203;Name=YP_002348373.1;Parent=gene3365;Dbxref=InterPro:IPR011251,UniProtKB%2FTrEMBL:Q7CKI1,Genbank:YP_002348373.1,GeneID:1176301;gbkey=CDS;product=hypothetical protein;protein_id=YP_002348373.1;transl_table=11
NC_003143.1	RefSeq	gene	3894351	3894662	.	-	.	ID=gene3366;Name=YPO3485;Dbxref=GeneID:1176302;gbkey=Gene;locus_tag=YPO3485
NC_003143.1	RefSeq	CDS	3894351	3894662	.	-	0	ID=cds3204;Name=YP_002348374.1;Parent=gene3366;Dbxref=InterPro:IPR001387,InterPro:IPR010982,UniProtKB%2FTrEMBL:Q7CKI2,Genbank:YP_002348374.1,GeneID:1176302;gbkey=CDS;product=transcriptional regulator;protein_id=YP_002348374.1;transl_table=11
NC_003143.1	RefSeq	region	3894453	3894518	.	-	.	ID=id2508;Note=Predicted helix-turn-helix motif with score 1996 %28%2B5.99 SD%29 at aa 49-70%2C sequence LTQVDIAKRIGVSRQAISKFEK;Dbxref=GeneID:1176302;gbkey=misc_feature
NC_003143.1	RefSeq	gene	3894686	3895054	.	-	.	ID=gene3367;Name=YPO3486;Dbxref=GeneID:1176303;gbkey=Gene;locus_tag=YPO3486
NC_003143.1	RefSeq	CDS	3894686	3895054	.	-	0	ID=cds3205;Name=YP_002348375.1;Parent=gene3367;Dbxref=InterPro:IPR009241,UniProtKB%2FTrEMBL:Q7CKI3,Genbank:YP_002348375.1,GeneID:1176303;gbkey=CDS;product=hypothetical protein;protein_id=YP_002348375.1;transl_table=11
NC_003143.1	RefSeq	gene	3895097	3895270	.	-	.	ID=gene3368;Name=YPO3487;Dbxref=GeneID:1176304;gbkey=Gene;locus_tag=YPO3487
NC_003143.1	RefSeq	CDS	3895097	3895270	.	-	0	ID=cds3206;Name=YP_002348376.1;Parent=gene3368;Note=no significant database matches. doubtful CDS. Very low %25GC content;Dbxref=UniProtKB%2FTrEMBL:Q7CKI4,Genbank:YP_002348376.1,GeneID:1176304;gbkey=CDS;product=hypothetical protein;protein_id=YP_002348376.1;transl_table=11
NC_003143.1	RefSeq	region	3895166	3895231	.	-	.	ID=id2509;Note=1 probable transmembrane helix predicted;Dbxref=GeneID:1176304;gbkey=misc_feature
NC_003143.1	RefSeq	gene	3895290	3897284	.	-	.	ID=gene3369;Name=deaD;Dbxref=GeneID:1176305;gbkey=Gene;gene=deaD;gene_synonym=mssB;locus_tag=YPO3488
NC_003143.1	RefSeq	CDS	3895290	3897284	.	-	0	ID=cds3207;Name=YP_002348377.1;Parent=gene3369;Note=participates in the assembly of the large subunit of the ribosome%3B plays a key role in optimal cell growth at low temperature and is required for normal cell division;Dbxref=InterPro:IPR000629,InterPro:IPR001650,InterPro:IPR005580,InterPro:IPR011545,InterPro:IPR014001,InterPro:IPR014014,InterPro:IPR014021,UniProtKB%2FTrEMBL:Q0WBG1,Genbank:YP_002348377.1,GeneID:1176305;gbkey=CDS;gene=deaD;product=ATP-dependent RNA helicase DeaD;protein_id=YP_002348377.1;transl_table=11
NC_003143.1	RefSeq	region	3896796	3896822	.	-	.	ID=id2510;Note=PS00039 DEAD-box subfamily ATP-dependent helicases signature.;Dbxref=GeneID:1176305;gbkey=misc_feature;gene=deaD
NC_003143.1	RefSeq	region	3897111	3897134	.	-	.	ID=id2511;Note=PS00017 ATP%2FGTP-binding site motif A %28P-loop%29.;Dbxref=GeneID:1176305;gbkey=misc_feature;gene=deaD
NC_003143.1	RefSeq	gene	3897471	3898355	.	-	.	ID=gene3370;Name=nlpI;Dbxref=GeneID:1176306;gbkey=Gene;gene=nlpI;locus_tag=YPO3489
NC_003143.1	RefSeq	CDS	3897471	3898355	.	-	0	ID=cds3208;Name=YP_002348378.1;Parent=gene3370;Note=lipoprotein that appears to be involved in cell division%3B interacts with the periplasmic protease Prc and may be activated by protease processing;Dbxref=InterPro:IPR001440,InterPro:IPR011990,InterPro:IPR013026,UniProtKB%2FTrEMBL:Q7CKI5,Genbank:YP_002348378.1,GeneID:1176306;gbkey=CDS;gene=nlpI;product=lipoprotein NlpI;protein_id=YP_002348378.1;transl_table=11
NC_003143.1	RefSeq	region	3898299	3898331	.	-	.	ID=id2512;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site.;Dbxref=GeneID:1176306;gbkey=misc_feature;gene=nlpI
NC_003143.1	RefSeq	gene	3898480	3900597	.	-	.	ID=gene3371;Name=pnp;Dbxref=GeneID:1176307;gbkey=Gene;gene=pnp;locus_tag=YPO3490
NC_003143.1	RefSeq	CDS	3898480	3900597	.	-	0	ID=cds3209;Name=YP_002348379.1;Parent=gene3371;Dbxref=InterPro:IPR001247,InterPro:IPR003029,InterPro:IPR004087,InterPro:IPR004088,InterPro:IPR008994,InterPro:IPR012162,InterPro:IPR012340,UniProtKB%2FTrEMBL:Q0WBF9,Genbank:YP_002348379.1,GeneID:1176307;gbkey=CDS;gene=pnp;product=polynucleotide phosphorylase;protein_id=YP_002348379.1;transl_table=11
NC_003143.1	RefSeq	region	3900824	3902282	.	-	.	ID=id2513;Note=IS1397-like insertion element: IS1661.;gbkey=misc_feature
NC_003143.1	RefSeq	repeat_region	3900824	3900855	.	+	.	ID=id2514;Note=Inverted repeat for IS1661 insertion element;gbkey=repeat_region
NC_003143.1	RefSeq	gene	3900864	3901649	.	-	.	ID=gene3372;Name=YPO3491;Dbxref=GeneID:1176308;gbkey=Gene;locus_tag=YPO3491
NC_003143.1	RefSeq	CDS	3900864	3901649	.	-	0	ID=cds3210;Name=YP_002348380.1;Parent=gene3372;Dbxref=InterPro:IPR001584,InterPro:IPR012337,UniProtKB%2FTrEMBL:Q7CKI6,Genbank:YP_002348380.1,GeneID:1176308;gbkey=CDS;product=transposase for insertion sequence IS1661;protein_id=YP_002348380.1;transl_table=11
NC_003143.1	RefSeq	gene	3901703	3902218	.	-	.	ID=gene3373;Name=YPO3492;Dbxref=GeneID:1176309;gbkey=Gene;locus_tag=YPO3492
NC_003143.1	RefSeq	CDS	3901703	3902218	.	-	0	ID=cds3211;Name=YP_002348381.1;Parent=gene3373;Dbxref=InterPro:IPR002514,InterPro:IPR009057,UniProtKB%2FTrEMBL:Q74RD6,Genbank:YP_002348381.1,GeneID:1176309;gbkey=CDS;product=insertion element IS1661 DNA-binding protein;protein_id=YP_002348381.1;transl_table=11
NC_003143.1	RefSeq	region	3902096	3902161	.	-	.	ID=id2515;Note=Predicted helix-turn-helix motif with score 1691 %28%2B4.95 SD%29 at aa 20-41%2C sequence ATLRETARQFSVGKSPLTRWIR;Dbxref=GeneID:1176309;gbkey=misc_feature
NC_003143.1	RefSeq	repeat_region	3902251	3902282	.	-	.	ID=id2516;Note=Inverted repeat for IS1661 insertion element;gbkey=repeat_region
NC_003143.1	RefSeq	gene	3902305	3902574	.	-	.	ID=gene3374;Name=rpsO;Dbxref=GeneID:1176310;gbkey=Gene;gene=rpsO;gene_synonym=secC;locus_tag=YPO3493
NC_003143.1	RefSeq	CDS	3902305	3902574	.	-	0	ID=cds3212;Name=YP_002348382.1;Parent=gene3374;Note=primary rRNA binding protein%3B helps nucleate assembly of 30S%3B binds directly to the 16S rRNA and an intersubunit bridge to the 23S rRNA%3B autoregulates translation through interactions with the mRNA leader sequence;Dbxref=InterPro:IPR000589,InterPro:IPR005290,InterPro:IPR009068,UniProtKB%2FTrEMBL:Q0WBF6,Genbank:YP_002348382.1,GeneID:1176310;gbkey=CDS;gene=rpsO;product=30S ribosomal protein S15;protein_id=YP_002348382.1;transl_table=11
NC_003143.1	RefSeq	region	3902368	3902460	.	-	.	ID=id2517;Note=PS00362 Ribosomal protein S15 signature.;Dbxref=GeneID:1176310;gbkey=misc_feature;gene=rpsO
NC_003143.1	RefSeq	gene	3902696	3903670	.	-	.	ID=gene3375;Name=truB;Dbxref=GeneID:1176311;gbkey=Gene;gene=truB;locus_tag=YPO3494
NC_003143.1	RefSeq	CDS	3902696	3903670	.	-	0	ID=cds3213;Name=YP_002348383.1;Parent=gene3375;Note=catalyzes isomerization of specific uridines in RNA to pseudouridine%3B responsible for residues in T loops of many tRNAs;Dbxref=InterPro:IPR002501,InterPro:IPR004510,UniProtKB%2FTrEMBL:Q0WBF5,Genbank:YP_002348383.1,GeneID:1176311;gbkey=CDS;gene=truB;product=tRNA pseudouridine synthase B;protein_id=YP_002348383.1;transl_table=11
NC_003143.1	RefSeq	region	3903185	3903226	.	-	.	ID=id2518;Note=PS01109 Ribosomal protein L10 signature.;Dbxref=GeneID:1176311;gbkey=misc_feature;gene=truB
NC_003143.1	RefSeq	gene	3903670	3904080	.	-	.	ID=gene3376;Name=rbfA;Dbxref=GeneID:1176312;gbkey=Gene;gene=rbfA;locus_tag=YPO3495
NC_003143.1	RefSeq	CDS	3903670	3904080	.	-	0	ID=cds3214;Name=YP_002348384.1;Parent=gene3376;Note=associates with free 30S ribosomal subunits%3B essential for efficient processing of 16S rRNA%3B in Escherichia coli rbfA is induced by cold shock;Dbxref=InterPro:IPR000238,UniProtKB%2FTrEMBL:Q0WBF4,Genbank:YP_002348384.1,GeneID:1176312;gbkey=CDS;gene=rbfA;product=ribosome-binding factor A;protein_id=YP_002348384.1;transl_table=11
NC_003143.1	RefSeq	region	3903772	3903837	.	-	.	ID=id2519;Note=PS01319 Ribosome-binding factor A signature.;Dbxref=GeneID:1176312;gbkey=misc_feature;gene=rbfA
NC_003143.1	RefSeq	gene	3904146	3906800	.	-	.	ID=gene3377;Name=infB;Dbxref=GeneID:1176313;gbkey=Gene;gene=infB;gene_synonym=ssyG;locus_tag=YPO3496
NC_003143.1	RefSeq	CDS	3904146	3906800	.	-	0	ID=cds3215;Name=YP_002348385.1;Parent=gene3377;Note=Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits during initiation of protein synthesis. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex;Dbxref=InterPro:IPR000178,InterPro:IPR000795,InterPro:IPR004161,InterPro:IPR005225,InterPro:IPR006847,InterPro:IPR009000,InterPro:IPR009061,InterPro:IPR013575,UniProtKB%2FTrEMBL:Q0WBF3,Genbank:YP_002348385.1,GeneID:1176313;gbkey=CDS;gene=infB;product=translation initiation factor IF-2;protein_id=YP_002348385.1;transl_table=11
NC_003143.1	RefSeq	region	3904233	3904301	.	-	.	ID=id2520;Note=PS01176 Initiation factor 2 signature.;Dbxref=GeneID:1176313;gbkey=misc_feature;gene=infB
NC_003143.1	RefSeq	region	3905604	3905627	.	-	.	ID=id2521;Note=PS00017 ATP%2FGTP-binding site motif A %28P-loop%29.;Dbxref=GeneID:1176313;gbkey=misc_feature;gene=infB
NC_003143.1	RefSeq	gene	3906825	3908312	.	-	.	ID=gene3378;Name=nusA;Dbxref=GeneID:1176314;gbkey=Gene;gene=nusA;locus_tag=YPO3497
NC_003143.1	RefSeq	CDS	3906825	3908312	.	-	0	ID=cds3216;Name=YP_002348386.1;Parent=gene3378;Note=modifies transcription through interactions with RNA polymerase affecting elongation%2C readthrough%2C termination%2C and antitermination;Dbxref=InterPro:IPR003029,InterPro:IPR004087,InterPro:IPR004088,InterPro:IPR008994,InterPro:IPR009019,InterPro:IPR010213,InterPro:IPR010214,InterPro:IPR010995,InterPro:IPR012340,InterPro:IPR013735,UniProtKB%2FTrEMBL:Q0WBF2,Genbank:YP_002348386.1,GeneID:1176314;gbkey=CDS;gene=nusA;product=transcription elongation factor NusA;protein_id=YP_002348386.1;transl_table=11
NC_003143.1	RefSeq	gene	3908334	3908786	.	-	.	ID=gene3379;Name=YPO3498;Dbxref=GeneID:1176315;gbkey=Gene;locus_tag=YPO3498
NC_003143.1	RefSeq	CDS	3908334	3908786	.	-	0	ID=cds3217;Name=YP_002348387.1;Parent=gene3379;Note=in Streptococcus pneumoniae this gene was found to be essential%3B structure determination of the Streptococcus protein shows that it is similar to a number of other proteins;Dbxref=InterPro:IPR003728,UniProtKB%2FTrEMBL:Q0WBF1,Genbank:YP_002348387.1,GeneID:1176315;gbkey=CDS;product=hypothetical protein;protein_id=YP_002348387.1;transl_table=11
NC_003143.1	RefSeq	gene	3909002	3909078	.	-	.	ID=gene3380;Name=YPt_51;Dbxref=GeneID:1176316;gbkey=Gene;locus_tag=YPt_51
NC_003143.1	RefSeq	tRNA	3909002	3909078	.	-	.	ID=rna70;Parent=gene3380;Note=tRNA Met anticodon CAT%2C Cove score 86.07;Dbxref=GeneID:1176316;gbkey=tRNA;product=tRNA-Met
NC_003143.1	RefSeq	exon	3909002	3909078	.	-	.	ID=id2522;Parent=rna70;Note=tRNA Met anticodon CAT%2C Cove score 86.07;Dbxref=GeneID:1176316;gbkey=tRNA;product=tRNA-Met
NC_003143.1	RefSeq	gene	3909139	3909225	.	-	.	ID=gene3381;Name=YPt_52;Dbxref=GeneID:1176317;gbkey=Gene;locus_tag=YPt_52
NC_003143.1	RefSeq	tRNA	3909139	3909225	.	-	.	ID=rna71;Parent=gene3381;Note=tRNA Leu anticodon GAG%2C Cove score 68.10;Dbxref=GeneID:1176317;gbkey=tRNA;product=tRNA-Leu
NC_003143.1	RefSeq	exon	3909139	3909225	.	-	.	ID=id2523;Parent=rna71;Note=tRNA Leu anticodon GAG%2C Cove score 68.10;Dbxref=GeneID:1176317;gbkey=tRNA;product=tRNA-Leu
NC_003143.1	RefSeq	gene	3909318	3909653	.	-	.	ID=gene3382;Name=secG;Dbxref=GeneID:1176318;gbkey=Gene;gene=secG;locus_tag=YPO3499
NC_003143.1	RefSeq	CDS	3909318	3909653	.	-	0	ID=cds3218;Name=YP_002348388.1;Parent=gene3382;Dbxref=InterPro:IPR004692,UniProtKB%2FTrEMBL:Q7CKI9,Genbank:YP_002348388.1,GeneID:1176318;gbkey=CDS;gene=secG;product=preprotein translocase subunit SecG;protein_id=YP_002348388.1;transl_table=11
NC_003143.1	RefSeq	gene	3909876	3911216	.	-	.	ID=gene3383;Name=glmM;Dbxref=GeneID:1176319;gbkey=Gene;gene=glmM;locus_tag=YPO3500
NC_003143.1	RefSeq	CDS	3909876	3911216	.	-	0	ID=cds3219;Name=YP_002348389.1;Parent=gene3383;Note=catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate;Dbxref=InterPro:IPR005841,InterPro:IPR005843,InterPro:IPR005844,InterPro:IPR005845,InterPro:IPR005846,InterPro:IPR006352,UniProtKB%2FTrEMBL:Q0WBE9,Genbank:YP_002348389.1,GeneID:1176319;gbkey=CDS;gene=glmM;product=phosphoglucosamine mutase;protein_id=YP_002348389.1;transl_table=11
NC_003143.1	RefSeq	region	3910887	3910931	.	-	.	ID=id2524;Note=PS00710 Phosphoglucomutase and phosphomannomutase phosphoserine signature.;Dbxref=GeneID:1176319;gbkey=misc_feature;gene=glmM
NC_003143.1	RefSeq	gene	3911226	3912059	.	-	.	ID=gene3384;Name=folP;Dbxref=GeneID:1176320;gbkey=Gene;gene=folP;locus_tag=YPO3501
NC_003143.1	RefSeq	CDS	3911226	3912059	.	-	0	ID=cds3220;Name=YP_002348390.1;Parent=gene3384;Note=catalyzes the formation of dihydropteroate from 2-amino-4-hydroxy-6-hydroxymethyl-7%2C8-dihydropteridine diphosphate and 4-aminobenzoate;Dbxref=InterPro:IPR000489,InterPro:IPR006390,InterPro:IPR011005,UniProtKB%2FTrEMBL:Q7CKJ1,Genbank:YP_002348390.1,GeneID:1176320;gbkey=CDS;gene=folP;product=dihydropteroate synthase;protein_id=YP_002348390.1;transl_table=11
NC_003143.1	RefSeq	region	3911868	3911909	.	-	.	ID=id2525;Note=PS00793 Dihydropteroate synthase signature 2.;Dbxref=GeneID:1176320;gbkey=misc_feature;gene=folP
NC_003143.1	RefSeq	region	3911964	3912011	.	-	.	ID=id2526;Note=PS00792 Dihydropteroate synthase signature 1.;Dbxref=GeneID:1176320;gbkey=misc_feature;gene=folP
NC_003143.1	RefSeq	gene	3912179	3914113	.	-	.	ID=gene3385;Name=hflB;Dbxref=GeneID:1176321;gbkey=Gene;gene=hflB;gene_synonym=mrsC,tolZ;locus_tag=YPO3502
NC_003143.1	RefSeq	CDS	3912179	3914113	.	-	0	ID=cds3221;Name=YP_002348391.1;Parent=gene3385;Note=inner membrane metalloprotease%3B may be involved in degradation of aberrant cytoplasmic and membrane proteins;Dbxref=InterPro:IPR000642,InterPro:IPR003593,InterPro:IPR003959,InterPro:IPR003960,InterPro:IPR005936,InterPro:IPR011546,UniProtKB%2FTrEMBL:Q0WBE7,Genbank:YP_002348391.1,GeneID:1176321;gbkey=CDS;gene=hflB;product=ATP-dependent metalloprotease;protein_id=YP_002348391.1;transl_table=11
NC_003143.1	RefSeq	region	3913187	3913243	.	-	.	ID=id2527;Note=PS00674 AAA-protein family signature.;Dbxref=GeneID:1176321;gbkey=misc_feature;gene=hflB
NC_003143.1	RefSeq	region	3913517	3913540	.	-	.	ID=id2528;Note=PS00017 ATP%2FGTP-binding site motif A %28P-loop%29.;Dbxref=GeneID:1176321;gbkey=misc_feature;gene=hflB
NC_003143.1	RefSeq	region	3913703	3913726	.	-	.	ID=id2529;Note=PS00017 ATP%2FGTP-binding site motif A %28P-loop%29.;Dbxref=GeneID:1176321;gbkey=misc_feature;gene=hflB
NC_003143.1	RefSeq	gene	3914170	3914799	.	-	.	ID=gene3386;Name=rrmJ;Dbxref=GeneID:1176322;gbkey=Gene;gene=rrmJ;gene_synonym=mrsF,rrmJ;locus_tag=YPO3503
NC_003143.1	RefSeq	CDS	3914170	3914799	.	-	0	ID=cds3222;Name=YP_002348392.1;Parent=gene3386;Note=Specifically methylates the uridine in position 2552 of 23S rRNA in the fully assembled 50S ribosomal subunit;Dbxref=InterPro:IPR002877,InterPro:IPR004512,UniProtKB%2FTrEMBL:Q0WBE6,Genbank:YP_002348392.1,GeneID:1176322;gbkey=CDS;gene=rrmJ;product=23S rRNA methyltransferase;protein_id=YP_002348392.1;transl_table=11
NC_003143.1	RefSeq	gene	3914946	3915239	.	+	.	ID=gene3387;Name=YPO3504;Dbxref=GeneID:1176323;gbkey=Gene;locus_tag=YPO3504
NC_003143.1	RefSeq	CDS	3914946	3915239	.	+	0	ID=cds3223;Name=YP_002348393.1;Parent=gene3387;Dbxref=InterPro:IPR001890,UniProtKB%2FTrEMBL:Q7CKJ2,Genbank:YP_002348393.1,GeneID:1176323;gbkey=CDS;product=hypothetical protein;protein_id=YP_002348393.1;transl_table=11
NC_003143.1	RefSeq	gene	3915367	3915843	.	-	.	ID=gene3388;Name=greA;Dbxref=GeneID:1176324;gbkey=Gene;gene=greA;locus_tag=YPO3505
NC_003143.1	RefSeq	CDS	3915367	3915843	.	-	0	ID=cds3224;Name=YP_002348394.1;Parent=gene3388;Note=necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites%3B arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through%2C resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3%27terminus;Dbxref=InterPro:IPR001437,InterPro:IPR006359,InterPro:IPR012243,UniProtKB%2FTrEMBL:Q0WBE4,Genbank:YP_002348394.1,GeneID:1176324;gbkey=CDS;gene=greA;product=transcription elongation factor GreA;protein_id=YP_002348394.1;transl_table=11
NC_003143.1	RefSeq	region	3915433	3915483	.	-	.	ID=id2530;Note=PS00830 Prokaryotic transcription elongation factors signature 2.;Dbxref=GeneID:1176324;gbkey=misc_feature;gene=greA
NC_003143.1	RefSeq	region	3915700	3915825	.	-	.	ID=id2531;Note=PS00829 Prokaryotic transcription elongation factors signature 1.;Dbxref=GeneID:1176324;gbkey=misc_feature;gene=greA
NC_003143.1	RefSeq	gene	3916101	3917549	.	+	.	ID=gene3389;Name=dacB;Dbxref=GeneID:1176325;gbkey=Gene;gene=dacB;locus_tag=YPO3506
NC_003143.1	RefSeq	CDS	3916101	3917549	.	+	0	ID=cds3225;Name=YP_002348395.1;Parent=gene3389;Note=penicillin binding protein 4%3B penicillin sensitive%3B catalyzes the formation of D-alanine from D-alanyl-D-alanine%3B one of four%2C DD-carboxypeptidase low-molecular weight penicillin-binding proteins that remove terminal D-alanine from pentapeptide side chains;Dbxref=InterPro:IPR000667,InterPro:IPR012338,UniProtKB%2FTrEMBL:Q7CKJ3,Genbank:YP_002348395.1,GeneID:1176325;gbkey=CDS;gene=dacB;product=D-alanyl-D-alanine carboxypeptidase%2Fendopeptidase;protein_id=YP_002348395.1;transl_table=11
NC_003143.1	RefSeq	gene	3917555	3918217	.	+	.	ID=gene3390;Name=basR;Dbxref=GeneID:1176326;gbkey=Gene;gene=basR;gene_synonym=pmrA;locus_tag=YPO3507
NC_003143.1	RefSeq	CDS	3917555	3918217	.	+	0	ID=cds3226;Name=YP_002348396.1;Parent=gene3390;Note=response regulator in two-component regulatory system with BasS;Dbxref=InterPro:IPR001789,InterPro:IPR001867,InterPro:IPR011006,UniProtKB%2FTrEMBL:Q7CKJ4,Genbank:YP_002348396.1,GeneID:1176326;gbkey=CDS;gene=basR;product=DNA-binding transcriptional regulator BasR;protein_id=YP_002348396.1;transl_table=11
NC_003143.1	RefSeq	gene	3918214	3919281	.	+	.	ID=gene3391;Name=basS;Dbxref=GeneID:1176327;gbkey=Gene;gene=basS;gene_synonym=pmrB;locus_tag=YPO3508
NC_003143.1	RefSeq	CDS	3918214	3919281	.	+	0	ID=cds3227;Name=YP_002348397.1;Parent=gene3391;Dbxref=InterPro:IPR003594,InterPro:IPR003660,InterPro:IPR003661,InterPro:IPR004358,InterPro:IPR005467,InterPro:IPR009082,UniProtKB%2FTrEMBL:Q7CKJ5,Genbank:YP_002348397.1,GeneID:1176327;gbkey=CDS;gene=basS;product=sensor protein BasS%2FPmrB;protein_id=YP_002348397.1;transl_table=11
NC_003143.1	RefSeq	region	3918853	3918918	.	+	.	ID=id2532;Note=Predicted helix-turn-helix motif with score 988 %28%2B2.55 SD%29 at aa 214-235%2C sequence PLQEELAEMCELRRQTIQWELP;Dbxref=GeneID:1176327;gbkey=misc_feature;gene=basS
NC_003143.1	RefSeq	gene	3919376	3920548	.	-	.	ID=gene3392;Name=obgE;Dbxref=GeneID:1176328;gbkey=Gene;gene=obgE;locus_tag=YPO3509
NC_003143.1	RefSeq	CDS	3919376	3920548	.	-	0	ID=cds3228;Name=YP_002348398.1;Parent=gene3392;Note=essential GTPase%3B exhibits high exchange rate for GTP%2FGDP%3B associates with 50S ribosomal subunit%3B involved in regulation of chromosomal replication;Dbxref=InterPro:IPR002917,InterPro:IPR006073,InterPro:IPR006074,InterPro:IPR006169,UniProtKB%2FTrEMBL:Q7CKJ6,Genbank:YP_002348398.1,GeneID:1176328;gbkey=CDS;gene=obgE;product=GTPase ObgE;protein_id=YP_002348398.1;transl_table=11
NC_003143.1	RefSeq	region	3919871	3919912	.	-	.	ID=id2533;Note=PS00905 GTP1%2FOBG family signature.;Dbxref=GeneID:1176328;gbkey=misc_feature;gene=obgE
NC_003143.1	RefSeq	region	3920030	3920053	.	-	.	ID=id2534;Note=PS00017 ATP%2FGTP-binding site motif A %28P-loop%29.;Dbxref=GeneID:1176328;gbkey=misc_feature;gene=obgE
NC_003143.1	RefSeq	gene	3920549	3921535	.	-	.	ID=gene3393;Name=YPO3510;Dbxref=GeneID:1176329;gbkey=Gene;locus_tag=YPO3510
NC_003143.1	RefSeq	CDS	3920549	3921535	.	-	0	ID=cds3229;Name=YP_002348399.1;Parent=gene3393;Dbxref=InterPro:IPR000620,UniProtKB%2FTrEMBL:Q7CKJ7,Genbank:YP_002348399.1,GeneID:1176329;gbkey=CDS;product=hypothetical protein;protein_id=YP_002348399.1;transl_table=11
NC_003143.1	RefSeq	gene	3921623	3921880	.	-	.	ID=gene3394;Name=rpmA;Dbxref=GeneID:1176330;gbkey=Gene;gene=rpmA;locus_tag=YPO3511
NC_003143.1	RefSeq	CDS	3921623	3921880	.	-	0	ID=cds3230;Name=YP_002348400.1;Parent=gene3394;Note=involved in the peptidyltransferase reaction during translation;Dbxref=InterPro:IPR001684,UniProtKB%2FTrEMBL:Q0WBD8,Genbank:YP_002348400.1,GeneID:1176330;gbkey=CDS;gene=rpmA;product=50S ribosomal protein L27;protein_id=YP_002348400.1;transl_table=11
NC_003143.1	RefSeq	region	3921737	3921781	.	-	.	ID=id2535;Note=PS00831 Ribosomal protein L27 signature.;Dbxref=GeneID:1176330;gbkey=misc_feature;gene=rpmA
NC_003143.1	RefSeq	gene	3921900	3922211	.	-	.	ID=gene3395;Name=rplU;Dbxref=GeneID:1176331;gbkey=Gene;gene=rplU;locus_tag=YPO3512
NC_003143.1	RefSeq	CDS	3921900	3922211	.	-	0	ID=cds3231;Name=YP_002348401.1;Parent=gene3395;Dbxref=InterPro:IPR001787,UniProtKB%2FTrEMBL:Q0WBD7,Genbank:YP_002348401.1,GeneID:1176331;gbkey=CDS;gene=rplU;product=50S ribosomal protein L21;protein_id=YP_002348401.1;transl_table=11
NC_003143.1	RefSeq	region	3921930	3921998	.	-	.	ID=id2536;Note=PS01169 Ribosomal protein L21 signature.;Dbxref=GeneID:1176331;gbkey=misc_feature;gene=rplU
NC_003143.1	RefSeq	gene	3922471	3923442	.	+	.	ID=gene3396;Name=ispB;Dbxref=GeneID:1176332;gbkey=Gene;gene=ispB;locus_tag=YPO3513
NC_003143.1	RefSeq	CDS	3922471	3923442	.	+	0	ID=cds3232;Name=YP_002348402.1;Parent=gene3396;Dbxref=InterPro:IPR000092,InterPro:IPR008949,UniProtKB%2FTrEMBL:Q7CKJ8,Genbank:YP_002348402.1,GeneID:1176332;gbkey=CDS;gene=ispB;product=octaprenyl diphosphate synthase;protein_id=YP_002348402.1;transl_table=11
NC_003143.1	RefSeq	region	3922711	3922755	.	+	.	ID=id2537;Note=PS00723 Polyprenyl synthetases signature 1.;Dbxref=GeneID:1176332;gbkey=misc_feature;gene=ispB
NC_003143.1	RefSeq	region	3923077	3923115	.	+	.	ID=id2538;Note=PS00444 Polyprenyl synthetases signature 2.;Dbxref=GeneID:1176332;gbkey=misc_feature;gene=ispB
NC_003143.1	RefSeq	gene	3923539	3923940	.	-	.	ID=gene3397;Name=YPO3514;Dbxref=GeneID:1176333;gbkey=Gene;locus_tag=YPO3514
NC_003143.1	RefSeq	CDS	3923539	3923940	.	-	0	ID=cds3233;Name=YP_002348403.1;Parent=gene3397;Dbxref=InterPro:IPR003314,InterPro:IPR011991,UniProtKB%2FTrEMBL:Q7CKJ9,Genbank:YP_002348403.1,GeneID:1176333;gbkey=CDS;product=hypothetical protein;protein_id=YP_002348403.1;transl_table=11
NC_003143.1	RefSeq	gene	3924070	3924345	.	+	.	ID=gene3398;Name=YPO3514a;Dbxref=GeneID:16744775;gbkey=Gene;locus_tag=YPO3514a
NC_003143.1	RefSeq	CDS	3924070	3924345	.	+	0	ID=cds3234;Name=YP_008479727.1;Parent=gene3398;Dbxref=Genbank:YP_008479727.1,GeneID:16744775;gbkey=CDS;product=DNA-binding protein;protein_id=YP_008479727.1;transl_table=11
NC_003143.1	RefSeq	gene	3924779	3925717	.	-	.	ID=gene3399;Name=mdh;Dbxref=GeneID:1176335;gbkey=Gene;gene=mdh;locus_tag=YPO3516
NC_003143.1	RefSeq	CDS	3924779	3925717	.	-	0	ID=cds3235;Name=YP_002348405.1;Parent=gene3399;Note=oxidizes malate to oxaloacetate;Dbxref=InterPro:IPR001236,InterPro:IPR001252,InterPro:IPR001557,InterPro:IPR010097,UniProtKB%2FTrEMBL:Q0WBD3,Genbank:YP_002348405.1,GeneID:1176335;gbkey=CDS;gene=mdh;product=malate dehydrogenase;protein_id=YP_002348405.1;transl_table=11
NC_003143.1	RefSeq	region	3925244	3925282	.	-	.	ID=id2539;Note=PS00068 Malate dehydrogenase active site signature.;Dbxref=GeneID:1176335;gbkey=misc_feature;gene=mdh
NC_003143.1	RefSeq	gene	3926181	3926651	.	+	.	ID=gene3400;Name=argR;Dbxref=GeneID:1176336;gbkey=Gene;gene=argR;gene_synonym=xerA;locus_tag=YPO3517
NC_003143.1	RefSeq	CDS	3926181	3926651	.	+	0	ID=cds3236;Name=YP_002348406.1;Parent=gene3400;Note=regulates arginine biosynthesis when complexed with arginine by binding at site that overlap the promotors of the arginine biosynthesis genes;Dbxref=InterPro:IPR001669,InterPro:IPR011991,UniProtKB%2FTrEMBL:Q0WBD2,Genbank:YP_002348406.1,GeneID:1176336;gbkey=CDS;gene=argR;product=arginine repressor ArgR;protein_id=YP_002348406.1;transl_table=11
NC_003143.1	RefSeq	gene	3927040	3927303	.	+	.	ID=gene3401;Name=YPO3518;Dbxref=GeneID:1176337;gbkey=Gene;locus_tag=YPO3518
NC_003143.1	RefSeq	CDS	3927040	3927303	.	+	0	ID=cds3237;Name=YP_002348407.1;Parent=gene3401;Dbxref=InterPro:IPR010854,UniProtKB%2FTrEMBL:Q7CKK1,Genbank:YP_002348407.1,GeneID:1176337;gbkey=CDS;product=hypothetical protein;protein_id=YP_002348407.1;transl_table=11
NC_003143.1	RefSeq	gene	3927599	3928981	.	-	.	ID=gene3402;Name=mpl;Dbxref=GeneID:1176338;gbkey=Gene;gene=mpl;locus_tag=YPO3519
NC_003143.1	RefSeq	CDS	3927599	3928981	.	-	0	ID=cds3238;Name=YP_002348408.1;Parent=gene3402;Dbxref=InterPro:IPR000713,InterPro:IPR004101,InterPro:IPR005757,InterPro:IPR012237,InterPro:IPR013221,UniProtKB%2FTrEMBL:Q7CKK2,Genbank:YP_002348408.1,GeneID:1176338;gbkey=CDS;gene=mpl;product=UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase;protein_id=YP_002348408.1;transl_table=11
NC_003143.1	RefSeq	gene	3929152	3930165	.	+	.	ID=gene3403;Name=fbp;Dbxref=GeneID:1176339;gbkey=Gene;gene=fbp;gene_synonym=fdp;locus_tag=YPO3520
NC_003143.1	RefSeq	CDS	3929152	3930165	.	+	0	ID=cds3239;Name=YP_002348409.1;Parent=gene3403;Note=catalyzes the formation of D-fructose 6-phosphate from fructose-1%2C6-bisphosphate;Dbxref=InterPro:IPR000146,UniProtKB%2FTrEMBL:Q0WBC9,Genbank:YP_002348409.1,GeneID:1176339;gbkey=CDS;gene=fbp;product=fructose-1%2C6-bisphosphatase;protein_id=YP_002348409.1;transl_table=11
NC_003143.1	RefSeq	region	3929959	3929997	.	+	.	ID=id2540;Note=PS00124 Fructose-1-6-bisphosphatase active site.;Dbxref=GeneID:1176339;gbkey=misc_feature;gene=fbp
NC_003143.1	RefSeq	gene	3930365	3930892	.	+	.	ID=gene3404;Name=ppa;Dbxref=GeneID:1176340;gbkey=Gene;gene=ppa;locus_tag=YPO3521
NC_003143.1	RefSeq	CDS	3930365	3930892	.	+	0	ID=cds3240;Name=YP_002348410.1;Parent=gene3404;Note=catalyzes the hydrolysis of pyrophosphate to phosphate;Dbxref=InterPro:IPR008162,UniProtKB%2FTrEMBL:Q0WBC8,Genbank:YP_002348410.1,GeneID:1176340;gbkey=CDS;gene=ppa;product=inorganic pyrophosphatase;protein_id=YP_002348410.1;transl_table=11
NC_003143.1	RefSeq	region	3930560	3930580	.	+	.	ID=id2541;Note=PS00387 Inorganic pyrophosphatase signature.;Dbxref=GeneID:1176340;gbkey=misc_feature;gene=ppa
NC_003143.1	RefSeq	gene	3931010	3931366	.	-	.	ID=gene3405;Name=YPO3522;Dbxref=GeneID:1176341;gbkey=Gene;locus_tag=YPO3522
NC_003143.1	RefSeq	CDS	3931010	3931366	.	-	0	ID=cds3241;Name=YP_002348411.1;Parent=gene3405;Dbxref=InterPro:IPR005347,UniProtKB%2FTrEMBL:Q7CKK3,Genbank:YP_002348411.1,GeneID:1176341;gbkey=CDS;product=hypothetical protein;protein_id=YP_002348411.1;transl_table=11
NC_003143.1	RefSeq	gene	3931369	3935286	.	-	.	ID=gene3406;Name=YPO3523;Dbxref=GeneID:1176342;gbkey=Gene;locus_tag=YPO3523
NC_003143.1	RefSeq	CDS	3931369	3935286	.	-	0	ID=cds3242;Name=YP_002348412.1;Parent=gene3406;Dbxref=InterPro:IPR007452,UniProtKB%2FTrEMBL:Q7CKK4,Genbank:YP_002348412.1,GeneID:1176342;gbkey=CDS;product=hypothetical protein;protein_id=YP_002348412.1;transl_table=11
NC_003143.1	RefSeq	gene	3935283	3937019	.	-	.	ID=gene3407;Name=YPO3524;Dbxref=GeneID:1176343;gbkey=Gene;locus_tag=YPO3524
NC_003143.1	RefSeq	CDS	3935283	3937019	.	-	0	ID=cds3243;Name=YP_002348413.1;Parent=gene3407;Dbxref=InterPro:IPR000184,InterPro:IPR002345,InterPro:IPR009070,InterPro:IPR010827,UniProtKB%2FTrEMBL:Q7CKK5,Genbank:YP_002348413.1,GeneID:1176343;gbkey=CDS;product=hypothetical protein;protein_id=YP_002348413.1;transl_table=11
NC_003143.1	RefSeq	region	3935466	3935504	.	-	.	ID=id2542;Note=PS00213 Lipocalin signature.;Dbxref=GeneID:1176343;gbkey=misc_feature
NC_003143.1	RefSeq	gene	3937294	3937932	.	+	.	ID=gene3408;Name=msrA;Dbxref=GeneID:1176344;gbkey=Gene;gene=msrA;gene_synonym=pms;locus_tag=YPO3525
NC_003143.1	RefSeq	CDS	3937294	3937932	.	+	0	ID=cds3244;Name=YP_002348414.1;Parent=gene3408;Note=this stereospecific enzymes reduces the S isomer of methionine sulfoxide while MsrB reduces the R form%3B provides protection against oxidative stress;Dbxref=InterPro:IPR002569,UniProtKB%2FTrEMBL:Q0WBC4,Genbank:YP_002348414.1,GeneID:1176344;gbkey=CDS;gene=msrA;product=methionine sulfoxide reductase A;protein_id=YP_002348414.1;transl_table=11
NC_003143.1	RefSeq	gene	3938210	3939541	.	+	.	ID=gene3409;Name=YPO3526;Dbxref=GeneID:1176345;gbkey=Gene;locus_tag=YPO3526
NC_003143.1	RefSeq	CDS	3938210	3939541	.	+	0	ID=cds3245;Name=YP_002348415.1;Parent=gene3409;Dbxref=InterPro:IPR000644,InterPro:IPR002550,InterPro:IPR005170,UniProtKB%2FTrEMBL:Q7CKK6,Genbank:YP_002348415.1,GeneID:1176345;gbkey=CDS;product=hypothetical protein;protein_id=YP_002348415.1;transl_table=11
NC_003143.1	RefSeq	gene	3939649	3939861	.	-	.	ID=gene3410;Name=YPO3527;Dbxref=GeneID:1176346;gbkey=Gene;locus_tag=YPO3527
NC_003143.1	RefSeq	CDS	3939649	3939861	.	-	0	ID=cds3246;Name=YP_002348416.1;Parent=gene3410;Dbxref=InterPro:IPR009491,UniProtKB%2FTrEMBL:Q7CKK7,Genbank:YP_002348416.1,GeneID:1176346;gbkey=CDS;product=hypothetical protein;protein_id=YP_002348416.1;transl_table=11
NC_003143.1	RefSeq	gene	3940197	3940760	.	+	.	ID=gene3411;Name=YPO3528;Dbxref=GeneID:1176347;gbkey=Gene;locus_tag=YPO3528
NC_003143.1	RefSeq	CDS	3940197	3940760	.	+	0	ID=cds3247;Name=YP_002348417.1;Parent=gene3411;Dbxref=InterPro:IPR006513,InterPro:IPR012335,InterPro:IPR012336,UniProtKB%2FTrEMBL:Q0WBC1,Genbank:YP_002348417.1,GeneID:1176347;gbkey=CDS;product=hypothetical protein;protein_id=YP_002348417.1;transl_table=11
NC_003143.1	RefSeq	gene	3940763	3941506	.	-	.	ID=gene3412;Name=cysQ;Dbxref=GeneID:1176348;gbkey=Gene;gene=cysQ;locus_tag=YPO3529
NC_003143.1	RefSeq	CDS	3940763	3941506	.	-	0	ID=cds3248;Name=YP_002348418.1;Parent=gene3412;Note=catalyzes the formation of AMP from adenosine-3%27%2C5%27-bisphosphate;Dbxref=InterPro:IPR000760,InterPro:IPR006240,UniProtKB%2FTrEMBL:Q7CKK8,Genbank:YP_002348418.1,GeneID:1176348;gbkey=CDS;gene=cysQ;product=adenosine-3%27%282%27%29%2C5%27-bisphosphate nucleotidase;protein_id=YP_002348418.1;transl_table=11
NC_003143.1	RefSeq	region	3940850	3940894	.	-	.	ID=id2543;Note=PS00630 Inositol monophosphatase family signature 2.;Dbxref=GeneID:1176348;gbkey=misc_feature;gene=cysQ
NC_003143.1	RefSeq	region	3941225	3941266	.	-	.	ID=id2544;Note=PS00629 Inositol monophosphatase family signature 1.;Dbxref=GeneID:1176348;gbkey=misc_feature;gene=cysQ
NC_003143.1	RefSeq	gene	3941938	3943908	.	+	.	ID=gene3413;Name=cpdB;Dbxref=GeneID:1176349;gbkey=Gene;gene=cpdB;locus_tag=YPO3530
NC_003143.1	RefSeq	CDS	3941938	3943908	.	+	0	ID=cds3249;Name=YP_002348419.1;Parent=gene3413;Note=periplasmic enzyme%3B functions during ribonucleic acid degradation%3B 2%27%2C3%27-cyclic nucleotides are first converted to 3%27-nucleotide and then cleaved to yield a ribonucleotide and a phosphate;Dbxref=InterPro:IPR004843,InterPro:IPR006146,InterPro:IPR006179,InterPro:IPR006294,InterPro:IPR008334,UniProtKB%2FTrEMBL:Q7CKK9,Genbank:YP_002348419.1,GeneID:1176349;gbkey=CDS;gene=cpdB;product=bifunctional 2%27%2C3%27-cyclic nucleotide 2%27-phosphodiesterase%2F3%27-nucleotidase;protein_id=YP_002348419.1;transl_table=11
NC_003143.1	RefSeq	region	3942031	3942069	.	+	.	ID=id2545;Note=PS00785 5%27-nucleotidase signature 1.;Dbxref=GeneID:1176349;gbkey=misc_feature;gene=cpdB
NC_003143.1	RefSeq	region	3942286	3942321	.	+	.	ID=id2546;Note=PS00786 5%27-nucleotidase signature 2.;Dbxref=GeneID:1176349;gbkey=misc_feature;gene=cpdB
NC_003143.1	RefSeq	gene	3944063	3944728	.	+	.	ID=gene3414;Name=YPO3531;Dbxref=GeneID:1176350;gbkey=Gene;locus_tag=YPO3531
NC_003143.1	RefSeq	CDS	3944063	3944728	.	+	0	ID=cds3250;Name=YP_002348420.1;Parent=gene3414;Note=Involved in anaerobic NO protection and iron metabolism;Dbxref=InterPro:IPR007500,InterPro:IPR012312,UniProtKB%2FTrEMBL:Q0WBB8,Genbank:YP_002348420.1,GeneID:1176350;gbkey=CDS;product=iron-sulfur cluster repair di-iron protein;protein_id=YP_002348420.1;transl_table=11
NC_003143.1	RefSeq	gene	3944826	3945446	.	-	.	ID=gene3415;Name=fklB;Dbxref=GeneID:1176351;gbkey=Gene;gene=fklB;locus_tag=YPO3532
NC_003143.1	RefSeq	CDS	3944826	3945446	.	-	0	ID=cds3251;Name=YP_002348421.1;Parent=gene3415;Note=FKBP-type%3B rotamase%3B catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides;Dbxref=InterPro:IPR000774,InterPro:IPR001179,UniProtKB%2FTrEMBL:Q7CKL1,Genbank:YP_002348421.1,GeneID:1176351;gbkey=CDS;gene=fklB;product=peptidyl-prolyl cis-trans isomerase;protein_id=YP_002348421.1;transl_table=11
NC_003143.1	RefSeq	region	3945027	3945074	.	-	.	ID=id2547;Note=PS00453 FKBP-type peptidyl-prolyl cis-trans isomerase signature 1.;Dbxref=GeneID:1176351;gbkey=misc_feature;gene=fklB
NC_003143.1	RefSeq	region	3945189	3945212	.	-	.	ID=id2548;Note=PS00017 ATP%2FGTP-binding site motif A %28P-loop%29.;Dbxref=GeneID:1176351;gbkey=misc_feature;gene=fklB
NC_003143.1	RefSeq	gene	3945789	3946529	.	+	.	ID=gene3416;Name=YPO3533;Dbxref=GeneID:1176352;gbkey=Gene;locus_tag=YPO3533
NC_003143.1	RefSeq	CDS	3945789	3946529	.	+	0	ID=cds3252;Name=YP_002348422.1;Parent=gene3416;Dbxref=InterPro:IPR007340,InterPro:IPR013731,UniProtKB%2FTrEMBL:Q7CKL2,Genbank:YP_002348422.1,GeneID:1176352;gbkey=CDS;product=hypothetical protein;protein_id=YP_002348422.1;transl_table=11
NC_003143.1	RefSeq	gene	3946669	3947124	.	+	.	ID=gene3417;Name=YPO3534;Dbxref=GeneID:1176353;gbkey=Gene;locus_tag=YPO3534
NC_003143.1	RefSeq	CDS	3946669	3947124	.	+	0	ID=cds3253;Name=YP_002348423.1;Parent=gene3417;Note=no significant database matches;Dbxref=UniProtKB%2FTrEMBL:Q7CKL3,Genbank:YP_002348423.1,GeneID:1176353;gbkey=CDS;product=hypothetical protein;protein_id=YP_002348423.1;transl_table=11
NC_003143.1	RefSeq	repeat_region	3947138	3947849	.	-	.	ID=id2549;Note=Contains a %27G%27 at nucleotide position 315%7EIS200-like insertion sequence:IS1541;gbkey=repeat_region
NC_003143.1	RefSeq	gene	3947246	3947704	.	-	.	ID=gene3418;Name=tnp;Dbxref=GeneID:1176354;gbkey=Gene;gene=tnp;locus_tag=YPO3535
NC_003143.1	RefSeq	CDS	3947246	3947704	.	-	0	ID=cds3254;Name=YP_002348424.1;Parent=gene3418;Dbxref=InterPro:IPR002686,UniProtKB%2FTrEMBL:Q74YM6,Genbank:YP_002348424.1,GeneID:1176354;gbkey=CDS;gene=tnp;product=transposase for the IS1541 insertion element;protein_id=YP_002348424.1;transl_table=11
NC_003143.1	RefSeq	gene	3947900	3948352	.	-	.	ID=gene3419;Name=rplI;Dbxref=GeneID:1176355;gbkey=Gene;gene=rplI;locus_tag=YPO3536
NC_003143.1	RefSeq	CDS	3947900	3948352	.	-	0	ID=cds3255;Name=YP_002348425.1;Parent=gene3419;Note=in Escherichia coli this protein is wrapped around the base of the L1 stalk;Dbxref=InterPro:IPR000244,InterPro:IPR009027,UniProtKB%2FTrEMBL:Q0WBB3,Genbank:YP_002348425.1,GeneID:1176355;gbkey=CDS;gene=rplI;product=50S ribosomal protein L9;protein_id=YP_002348425.1;transl_table=11
NC_003143.1	RefSeq	region	3948233	3948316	.	-	.	ID=id2550;Note=PS00651 Ribosomal protein L9 signature.;Dbxref=GeneID:1176355;gbkey=misc_feature;gene=rplI
NC_003143.1	RefSeq	gene	3948392	3948619	.	-	.	ID=gene3420;Name=rpsR;Dbxref=GeneID:1176356;gbkey=Gene;gene=rpsR;locus_tag=YPO3537
NC_003143.1	RefSeq	CDS	3948392	3948619	.	-	0	ID=cds3256;Name=YP_002348426.1;Parent=gene3420;Note=binds as a heterodimer with protein S6 to the central domain of the 16S rRNA%3B helps stabilize the platform of the 30S subunit;Dbxref=InterPro:IPR001648,UniProtKB%2FTrEMBL:Q0WBB2,Genbank:YP_002348426.1,GeneID:1176356;gbkey=CDS;gene=rpsR;product=30S ribosomal protein S18;protein_id=YP_002348426.1;transl_table=11
NC_003143.1	RefSeq	region	3948488	3948559	.	-	.	ID=id2551;Note=PS00057 Ribosomal protein S18 signature.;Dbxref=GeneID:1176356;gbkey=misc_feature;gene=rpsR
NC_003143.1	RefSeq	gene	3948624	3948944	.	-	.	ID=gene3421;Name=priB;Dbxref=GeneID:1176357;gbkey=Gene;gene=priB;locus_tag=YPO3538
NC_003143.1	RefSeq	CDS	3948624	3948944	.	-	0	ID=cds3257;Name=YP_002348427.1;Parent=gene3421;Note=binds single-stranded DNA at the primosome assembly site;Dbxref=InterPro:IPR000424,InterPro:IPR008994,InterPro:IPR010913,InterPro:IPR011372,InterPro:IPR012340,UniProtKB%2FTrEMBL:Q0WBB1,Genbank:YP_002348427.1,GeneID:1176357;gbkey=CDS;gene=priB;product=primosomal replication protein N;protein_id=YP_002348427.1;transl_table=11
NC_003143.1	RefSeq	gene	3948950	3949342	.	-	.	ID=gene3422;Name=rpsF;Dbxref=GeneID:1176358;gbkey=Gene;gene=rpsF;locus_tag=YPO3539
NC_003143.1	RefSeq	CDS	3948950	3949342	.	-	0	ID=cds3258;Name=YP_002348428.1;Parent=gene3422;Note=binds cooperatively with S18 to the S15-16S complex%2C allowing platform assembly to continue with S11 and S21;Dbxref=InterPro:IPR000529,UniProtKB%2FTrEMBL:Q0WBB0,Genbank:YP_002348428.1,GeneID:1176358;gbkey=CDS;gene=rpsF;product=30S ribosomal protein S6;protein_id=YP_002348428.1;transl_table=11
NC_003143.1	RefSeq	region	3949187	3949216	.	-	.	ID=id2552;Note=PS01048 Ribosomal protein S6 signature.;Dbxref=GeneID:1176358;gbkey=misc_feature;gene=rpsF
NC_003143.1	RefSeq	gene	3949356	3949634	.	-	.	ID=gene3423;Name=YPO3540;Dbxref=GeneID:1176359;gbkey=Gene;locus_tag=YPO3540
NC_003143.1	RefSeq	CDS	3949356	3949634	.	-	0	ID=cds3259;Name=YP_002348429.1;Parent=gene3423;Note=no significant database hits;Dbxref=UniProtKB%2FTrEMBL:Q74XA5,Genbank:YP_002348429.1,GeneID:1176359;gbkey=CDS;product=hypothetical protein;protein_id=YP_002348429.1;transl_table=11
NC_003143.1	RefSeq	gene	3949709	3950380	.	-	.	ID=gene3424;Name=YPO3541;Dbxref=GeneID:1176360;gbkey=Gene;locus_tag=YPO3541;pseudo=true
NC_003143.1	RefSeq	region	3949709	3950380	.	-	.	ID=id2553;Note=Deletion of 26 amino acids at the N-terminal end due to the insertion of IS100 element. Similar to Escherichia coli hypothetical 27.6 kDa protein in aidB-sgaT intergenic region YjfP SW:YJFP_ECOLI %28P39298%29 %28249 aa%29 fasta scores: E%28%29: 0%2C 52.0%25 id in 223 aa;Dbxref=GeneID:1176360;gbkey=misc_feature;pseudo=true
NC_003143.1	RefSeq	repeat_region	3950381	3952334	.	+	.	ID=id2554;Note=insertion sequence:IS100;gbkey=repeat_region
NC_003143.1	RefSeq	repeat_region	3950381	3950408	.	+	.	ID=id2555;Note=IS100 inverted repeat;gbkey=repeat_region
NC_003143.1	RefSeq	gene	3950467	3951489	.	+	.	ID=gene3425;Name=y1093;Dbxref=GeneID:1176361;gbkey=Gene;gene=y1093;gene_synonym=ypmt1;locus_tag=YPO3542
NC_003143.1	RefSeq	CDS	3950467	3951489	.	+	0	ID=cds3260;Name=YP_002348430.1;Parent=gene3425;Dbxref=InterPro:IPR001584,InterPro:IPR006120,InterPro:IPR009057,InterPro:IPR012287,InterPro:IPR012337,UniProtKB%2FTrEMBL:Q7ARN5,Genbank:YP_002348430.1,GeneID:1176361;gbkey=CDS;gene=y1093;product=transposase for insertion sequence IS100;protein_id=YP_002348430.1;transl_table=11
NC_003143.1	RefSeq	region	3950518	3950583	.	+	.	ID=id2556;Note=Predicted helix-turn-helix motif with score 2147 %28%2B6.50 SD%29 at aa 18-39%2C sequence MSSRAIARELGISRNTVKRYLQ;Dbxref=GeneID:1176361;gbkey=misc_feature;gene=y1093
NC_003143.1	RefSeq	gene	3951486	3952268	.	+	.	ID=gene3426;Name=YPO3543;Note=ypmt1.57c;Dbxref=GeneID:1176362;gbkey=Gene;locus_tag=YPO3543
NC_003143.1	RefSeq	CDS	3951486	3952268	.	+	0	ID=cds3261;Name=YP_002348431.1;Parent=gene3426;Dbxref=InterPro:IPR001270,InterPro:IPR002611,InterPro:IPR003593,UniProtKB%2FTrEMBL:Q7ARK4,Genbank:YP_002348431.1,GeneID:1176362;gbkey=CDS;product=transposase%2FIS protein;protein_id=YP_002348431.1;transl_table=11
NC_003143.1	RefSeq	region	3951813	3951836	.	+	.	ID=id2557;Note=PS00017 ATP%2FGTP-binding site motif A %28P-loop%29.;Dbxref=GeneID:1176362;gbkey=misc_feature
NC_003143.1	RefSeq	gene	3952284	3953225	.	+	.	ID=gene3427;Name=YPO3544;Dbxref=GeneID:1176363;gbkey=Gene;locus_tag=YPO3544
NC_003143.1	RefSeq	CDS	3952284	3953225	.	+	0	ID=cds3262;Name=YP_008479728.1;Parent=gene3427;Dbxref=Genbank:YP_008479728.1,GeneID:1176363;gbkey=CDS;product=hypothetical protein;protein_id=YP_008479728.1;transl_table=11
NC_003143.1	RefSeq	repeat_region	3952307	3952334	.	-	.	ID=id2558;Note=IS100 inverted repeat;gbkey=repeat_region
NC_003143.1	RefSeq	gene	3953349	3954242	.	-	.	ID=gene3428;Name=YPO3545;Dbxref=GeneID:1176364;gbkey=Gene;locus_tag=YPO3545
NC_003143.1	RefSeq	CDS	3953349	3954242	.	-	0	ID=cds3263;Name=YP_002348432.1;Parent=gene3428;Dbxref=InterPro:IPR000847,InterPro:IPR005119,InterPro:IPR011991,UniProtKB%2FTrEMBL:Q7CLA4,Genbank:YP_002348432.1,GeneID:1176364;gbkey=CDS;product=LysR family transcriptional regulator;protein_id=YP_002348432.1;transl_table=11
NC_003143.1	RefSeq	region	3954084	3954176	.	-	.	ID=id2559;Note=PS00044 Bacterial regulatory proteins%2C lysR family signature.;Dbxref=GeneID:1176364;gbkey=misc_feature
NC_003143.1	RefSeq	region	3954114	3954179	.	-	.	ID=id2560;Note=Predicted helix-turn-helix motif with score 1071 %28%2B2.83 SD%29 at aa 22-43%2C sequence GSFAAAADELGRVPSALSYTMQ;Dbxref=GeneID:1176364;gbkey=misc_feature
NC_003143.1	RefSeq	gene	3954504	3955208	.	+	.	ID=gene3429;Name=YPO3546;Dbxref=GeneID:1176365;gbkey=Gene;locus_tag=YPO3546
NC_003143.1	RefSeq	CDS	3954504	3955208	.	+	0	ID=cds3264;Name=YP_002348433.1;Parent=gene3429;Dbxref=InterPro:IPR003829,InterPro:IPR011051,InterPro:IPR012093,UniProtKB%2FTrEMBL:Q7CLA3,Genbank:YP_002348433.1,GeneID:1176365;gbkey=CDS;product=hypothetical protein;protein_id=YP_002348433.1;transl_table=11
NC_003143.1	RefSeq	gene	3955749	3956125	.	-	.	ID=gene3430;Name=rnpB;Dbxref=GeneID:1176366;gbkey=Gene;gene=rnpB;locus_tag=YPOs07
NC_003143.1	RefSeq	ncRNA	3955749	3956125	.	-	.	ID=rna72;Parent=gene3430;Note=Similar to Escherichia coli RNase P%2C RNA component involved in tRNA and 4.5S RNA-processing%2C rnpB%2C 92%25 identity in 347 nt overlap;Dbxref=GeneID:1176366;gbkey=ncRNA;gene=rnpB;ncrna_class=RNase_P_RNA;product=RNase P RNA component
NC_003143.1	RefSeq	exon	3955749	3956125	.	-	.	ID=id2561;Parent=rna72;Note=Similar to Escherichia coli RNase P%2C RNA component involved in tRNA and 4.5S RNA-processing%2C rnpB%2C 92%25 identity in 347 nt overlap;Dbxref=GeneID:1176366;gbkey=ncRNA;gene=rnpB;ncrna_class=RNase_P_RNA;product=RNase P RNA component
NC_003143.1	RefSeq	gene	3956145	3957044	.	-	.	ID=gene3431;Name=YPO3547;Dbxref=GeneID:1176367;gbkey=Gene;locus_tag=YPO3547
NC_003143.1	RefSeq	CDS	3956145	3957044	.	-	0	ID=cds3265;Name=YP_002348434.1;Parent=gene3431;Dbxref=InterPro:IPR000878,InterPro:IPR008189,UniProtKB%2FTrEMBL:Q7CLA2,Genbank:YP_002348434.1,GeneID:1176367;gbkey=CDS;product=tetrapyrrole methylase;protein_id=YP_002348434.1;transl_table=11
NC_003143.1	RefSeq	region	3956739	3956774	.	-	.	ID=id2562;Note=PS01296 Uncharacterized protein family UPF0011 signature.;Dbxref=GeneID:1176367;gbkey=misc_feature
NC_003143.1	RefSeq	gene	3957107	3959080	.	+	.	ID=gene3432;Name=YPO3548;Dbxref=GeneID:1176368;gbkey=Gene;locus_tag=YPO3548
NC_003143.1	RefSeq	CDS	3957107	3959080	.	+	0	ID=cds3266;Name=YP_002348435.1;Parent=gene3432;Dbxref=InterPro:IPR007443,UniProtKB%2FTrEMBL:Q0WBA3,Genbank:YP_002348435.1,GeneID:1176368;gbkey=CDS;product=hypothetical protein;protein_id=YP_002348435.1;transl_table=11
NC_003143.1	RefSeq	region	3957152	3957184	.	+	.	ID=id2563;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site.;Dbxref=GeneID:1176368;gbkey=misc_feature
NC_003143.1	RefSeq	gene	3959164	3959517	.	+	.	ID=gene3433;Name=YPO3549;Dbxref=GeneID:1176369;gbkey=Gene;locus_tag=YPO3549
NC_003143.1	RefSeq	CDS	3959164	3959517	.	+	0	ID=cds3267;Name=YP_002348436.1;Parent=gene3433;Dbxref=InterPro:IPR003509,UniProtKB%2FTrEMBL:Q0WBA2,Genbank:YP_002348436.1,GeneID:1176369;gbkey=CDS;product=hypothetical protein;protein_id=YP_002348436.1;transl_table=11
NC_003143.1	RefSeq	gene	3959788	3960378	.	+	.	ID=gene3434;Name=YPO3550;Dbxref=GeneID:1176370;gbkey=Gene;locus_tag=YPO3550
NC_003143.1	RefSeq	CDS	3959788	3960378	.	+	0	ID=cds3268;Name=YP_002348437.1;Parent=gene3434;Note=Required for the timely initiation of chromosomal replication via direct interactions with the dnaA initiator protein;Dbxref=InterPro:IPR004515,UniProtKB%2FTrEMBL:Q0WBA1,Genbank:YP_002348437.1,GeneID:1176370;gbkey=CDS;product=chromosome replication initiator DnaA;protein_id=YP_002348437.1;transl_table=11
NC_003143.1	RefSeq	gene	3960389	3960964	.	+	.	ID=gene3435;Name=YPO3551;Dbxref=GeneID:1176371;gbkey=Gene;locus_tag=YPO3551
NC_003143.1	RefSeq	CDS	3960389	3960964	.	+	0	ID=cds3269;Name=YP_002348438.1;Parent=gene3435;Dbxref=InterPro:IPR007055,InterPro:IPR014004,UniProtKB%2FTrEMBL:Q74PT1,Genbank:YP_002348438.1,GeneID:1176371;gbkey=CDS;product=hypothetical protein;protein_id=YP_002348438.1;transl_table=11
NC_003143.1	RefSeq	region	3960413	3960445	.	+	.	ID=id2564;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site.;Dbxref=GeneID:1176371;gbkey=misc_feature
NC_003143.1	RefSeq	gene	3961171	3961896	.	-	.	ID=gene3436;Name=mtgA;Dbxref=GeneID:1176372;gbkey=Gene;gene=mtgA;locus_tag=YPO3552
NC_003143.1	RefSeq	CDS	3961171	3961896	.	-	0	ID=cds3270;Name=YP_002348439.1;Parent=gene3436;Note=glycosyltransferase%3B polymerizes glycan strands in the peptidoglycan;Dbxref=InterPro:IPR001264,InterPro:IPR011812,UniProtKB%2FTrEMBL:Q0WB99,Genbank:YP_002348439.1,GeneID:1176372;gbkey=CDS;gene=mtgA;product=monofunctional biosynthetic peptidoglycan transglycosylase;protein_id=YP_002348439.1;transl_table=11
NC_003143.1	RefSeq	region	3961768	3961833	.	-	.	ID=id2565;Note=1 probable transmembrane helix predicted;Dbxref=GeneID:1176372;gbkey=misc_feature;gene=mtgA
NC_003143.1	RefSeq	gene	3961893	3962546	.	-	.	ID=gene3437;Name=elbB;Dbxref=GeneID:1176373;gbkey=Gene;gene=elbB;locus_tag=YPO3553
NC_003143.1	RefSeq	CDS	3961893	3962546	.	-	0	ID=cds3271;Name=YP_002348440.1;Parent=gene3437;Dbxref=InterPro:IPR002818,UniProtKB%2FTrEMBL:Q7CL99,Genbank:YP_002348440.1,GeneID:1176373;gbkey=CDS;gene=elbB;product=isoprenoid biosynthesis protein with amidotransferase-like domain;protein_id=YP_002348440.1;transl_table=11
NC_003143.1	RefSeq	gene	3962788	3965124	.	-	.	ID=gene3438;Name=arcB;Dbxref=GeneID:1176375;gbkey=Gene;gene=arcB;locus_tag=YPO3555
NC_003143.1	RefSeq	CDS	3962788	3965124	.	-	0	ID=cds3272;Name=YP_002348442.1;Parent=gene3438;Note=sensor-regulator protein which regulates the expression of many genes in response to respiratory growth conditions including anaerobic repression of the arc modulon%3B hybrid sensory histidine kinase in two-component regulatory system with ArcA;Dbxref=InterPro:IPR000014,InterPro:IPR000700,InterPro:IPR001610,InterPro:IPR001789,InterPro:IPR003594,InterPro:IPR003661,InterPro:IPR004358,InterPro:IPR005467,InterPro:IPR008207,InterPro:IPR009082,InterPro:IPR011006,InterPro:IPR013767,UniProtKB%2FTrEMBL:Q7CL98,Genbank:YP_002348442.1,GeneID:1176375;gbkey=CDS;gene=arcB;product=aerobic respiration control sensor protein ArcB;protein_id=YP_002348442.1;transl_table=11
NC_003143.1	RefSeq	gene	3965388	3966311	.	-	.	ID=gene3439;Name=YPO3556;Dbxref=GeneID:1176376;gbkey=Gene;locus_tag=YPO3556
NC_003143.1	RefSeq	CDS	3965388	3966311	.	-	0	ID=cds3273;Name=YP_002348443.1;Parent=gene3439;Dbxref=InterPro:IPR005911,InterPro:IPR006638,InterPro:IPR007197,UniProtKB%2FTrEMBL:Q0WB95,Genbank:YP_002348443.1,GeneID:1176376;gbkey=CDS;product=hypothetical protein;protein_id=YP_002348443.1;transl_table=11
NC_003143.1	RefSeq	gene	3967134	3971600	.	+	.	ID=gene3440;Name=gltB;Dbxref=GeneID:1176377;gbkey=Gene;gene=gltB;locus_tag=YPO3557
NC_003143.1	RefSeq	CDS	3967134	3971600	.	+	0	ID=cds3274;Name=YP_002348444.1;Parent=gene3440;Note=catalyzes the formation of glutamate from glutamine and alpha-ketoglutarate;Dbxref=Genbank:YP_002348444.1,GeneID:1176377;gbkey=CDS;gene=gltB;product=glutamate synthase subunit alpha;protein_id=YP_002348444.1;transl_table=11
NC_003143.1	RefSeq	region	3967263	3967286	.	+	.	ID=id2566;Note=PS00017 ATP%2FGTP-binding site motif A %28P-loop%29.;Dbxref=GeneID:1176377;gbkey=misc_feature;gene=gltB
NC_003143.1	RefSeq	gene	3971610	3973028	.	+	.	ID=gene3441;Name=gltD;Dbxref=GeneID:1176378;gbkey=Gene;gene=gltD;locus_tag=YPO3558
NC_003143.1	RefSeq	CDS	3971610	3973028	.	+	0	ID=cds3275;Name=YP_002348445.1;Parent=gene3441;Note=glutamate synthase is composed of subunits alpha and beta%3B beta subunit is a flavin adenine dinucleotide-NADPH dependent oxidoreductase%3B provides electrons to the alpha subunit%2C which binds L-glutamine and 2-oxoglutarate and forms L-glutamate;Dbxref=InterPro:IPR000103,InterPro:IPR000759,InterPro:IPR001327,InterPro:IPR006006,InterPro:IPR009051,InterPro:IPR013027,UniProtKB%2FTrEMBL:Q74PS5,Genbank:YP_002348445.1,GeneID:1176378;gbkey=CDS;gene=gltD;product=glutamate synthase subunit beta;protein_id=YP_002348445.1;transl_table=11
NC_003143.1	RefSeq	gene	3973469	3973954	.	+	.	ID=gene3442;Name=YPO3559;Dbxref=GeneID:1176379;gbkey=Gene;locus_tag=YPO3559
NC_003143.1	RefSeq	CDS	3973469	3973954	.	+	0	ID=cds3276;Name=YP_002348446.1;Parent=gene3442;Dbxref=UniProtKB%2FTrEMBL:Q0WB92,Genbank:YP_002348446.1,GeneID:1176379;gbkey=CDS;product=hypothetical protein;protein_id=YP_002348446.1;transl_table=11
NC_003143.1	RefSeq	gene	3974107	3974622	.	-	.	ID=gene3443;Name=sspB;Dbxref=GeneID:1176380;gbkey=Gene;gene=sspB;locus_tag=YPO3560
NC_003143.1	RefSeq	CDS	3974107	3974622	.	-	0	ID=cds3277;Name=YP_002348447.1;Parent=gene3443;Dbxref=InterPro:IPR007481,UniProtKB%2FTrEMBL:Q7CL97,Genbank:YP_002348447.1,GeneID:1176380;gbkey=CDS;gene=sspB;product=ClpXP protease specificity-enhancing factor;protein_id=YP_002348447.1;transl_table=11
NC_003143.1	RefSeq	gene	3974628	3975269	.	-	.	ID=gene3444;Name=sspA;Dbxref=GeneID:1176381;gbkey=Gene;gene=sspA;gene_synonym=ssp,sspA;locus_tag=YPO3561
NC_003143.1	RefSeq	CDS	3974628	3975269	.	-	0	ID=cds3278;Name=YP_002348448.1;Parent=gene3444;Note=transcriptional activator%3B required for activation of bacteriophage P1 late promoter%3B induced by starvation;Dbxref=InterPro:IPR004045,InterPro:IPR004046,InterPro:IPR010987,InterPro:IPR012335,InterPro:IPR012336,UniProtKB%2FTrEMBL:Q7CL96,Genbank:YP_002348448.1,GeneID:1176381;gbkey=CDS;gene=sspA;product=stringent starvation protein A;protein_id=YP_002348448.1;transl_table=11
NC_003143.1	RefSeq	gene	3975643	3976035	.	-	.	ID=gene3445;Name=rpsI;Dbxref=GeneID:1176382;gbkey=Gene;gene=rpsI;locus_tag=YPO3562
NC_003143.1	RefSeq	CDS	3975643	3976035	.	-	0	ID=cds3279;Name=YP_002348449.1;Parent=gene3445;Note=forms a direct contact with the tRNA during translation;Dbxref=InterPro:IPR000754,UniProtKB%2FTrEMBL:Q0WB89,Genbank:YP_002348449.1,GeneID:1176382;gbkey=CDS;gene=rpsI;product=30S ribosomal protein S9;protein_id=YP_002348449.1;transl_table=11
NC_003143.1	RefSeq	region	3975775	3975831	.	-	.	ID=id2567;Note=PS00360 Ribosomal protein S9 signature.;Dbxref=GeneID:1176382;gbkey=misc_feature;gene=rpsI
NC_003143.1	RefSeq	gene	3976050	3976478	.	-	.	ID=gene3446;Name=rplM;Dbxref=GeneID:1176383;gbkey=Gene;gene=rplM;locus_tag=YPO3563
NC_003143.1	RefSeq	CDS	3976050	3976478	.	-	0	ID=cds3280;Name=YP_002348450.1;Parent=gene3446;Note=in Escherichia coli this protein is one of the earliest assembly proteins in the large subunit;Dbxref=UniProtKB%2FTrEMBL:Q0WB88,Genbank:YP_002348450.1,GeneID:1176383;gbkey=CDS;gene=rplM;product=50S ribosomal protein L13;protein_id=YP_002348450.1;transl_table=11
NC_003143.1	RefSeq	region	3976098	3976166	.	-	.	ID=id2568;Note=PS00783 Ribosomal protein L13 signature.;Dbxref=GeneID:1176383;gbkey=misc_feature;gene=rplM
NC_003143.1	RefSeq	gene	3976792	3977919	.	-	.	ID=gene3447;Name=YPO3564;Dbxref=GeneID:1176384;gbkey=Gene;locus_tag=YPO3564
NC_003143.1	RefSeq	CDS	3976792	3977919	.	-	0	ID=cds3281;Name=YP_002348451.1;Parent=gene3447;Dbxref=InterPro:IPR005654,UniProtKB%2FTrEMBL:Q0WB87,Genbank:YP_002348451.1,GeneID:1176384;gbkey=CDS;product=hypothetical protein;protein_id=YP_002348451.1;transl_table=11
NC_003143.1	RefSeq	region	3977662	3977685	.	-	.	ID=id2569;Note=PS00017 ATP%2FGTP-binding site motif A %28P-loop%29.;Dbxref=GeneID:1176384;gbkey=misc_feature
NC_003143.1	RefSeq	gene	3978143	3978547	.	+	.	ID=gene3448;Name=YPO3565;Dbxref=GeneID:1176385;gbkey=Gene;locus_tag=YPO3565
NC_003143.1	RefSeq	CDS	3978143	3978547	.	+	0	ID=cds3282;Name=YP_002348452.1;Parent=gene3448;Dbxref=InterPro:IPR009386,UniProtKB%2FTrEMBL:Q7CL95,Genbank:YP_002348452.1,GeneID:1176385;gbkey=CDS;product=cytochrome d ubiquinol oxidase subunit III;protein_id=YP_002348452.1;transl_table=11
NC_003143.1	RefSeq	region	3978155	3978214	.	+	.	ID=id2570;Note=1 probable transmembrane helix predicted;Dbxref=GeneID:1176385;gbkey=misc_feature
NC_003143.1	RefSeq	gene	3978818	3980191	.	+	.	ID=gene3449;Name=degQ;Dbxref=GeneID:1176386;gbkey=Gene;gene=degQ;gene_synonym=hhoA;locus_tag=YPO3566
NC_003143.1	RefSeq	CDS	3978818	3980191	.	+	0	ID=cds3283;Name=YP_002348453.1;Parent=gene3449;Dbxref=InterPro:IPR001254,InterPro:IPR001478,InterPro:IPR001940,InterPro:IPR009003,InterPro:IPR011782,UniProtKB%2FTrEMBL:Q74PR7,Genbank:YP_002348453.1,GeneID:1176386;gbkey=CDS;gene=degQ;product=protease;protein_id=YP_002348453.1;transl_table=11
NC_003143.1	RefSeq	region	3979820	3979843	.	+	.	ID=id2571;Note=PS00017 ATP%2FGTP-binding site motif A %28P-loop%29.;Dbxref=GeneID:1176386;gbkey=misc_feature;gene=degQ
NC_003143.1	RefSeq	repeat_region	3980200	3980911	.	-	.	ID=id2572;Note=Contains a %27G%27 at nucleotide position 315%7EIS200-like insertion sequence:IS1541;gbkey=repeat_region
NC_003143.1	RefSeq	gene	3980308	3980766	.	-	.	ID=gene3450;Name=tnp;Dbxref=GeneID:1176387;gbkey=Gene;gene=tnp;locus_tag=YPO3567
NC_003143.1	RefSeq	CDS	3980308	3980766	.	-	0	ID=cds3284;Name=YP_002348454.1;Parent=gene3450;Dbxref=InterPro:IPR002686,UniProtKB%2FTrEMBL:Q74YM6,Genbank:YP_002348454.1,GeneID:1176387;gbkey=CDS;gene=tnp;product=transposase for the IS1541 insertion element;protein_id=YP_002348454.1;transl_table=11
NC_003143.1	RefSeq	gene	3980992	3982080	.	+	.	ID=gene3451;Name=degS;Dbxref=GeneID:1176388;gbkey=Gene;gene=degS;gene_synonym=hhoB,htrH;locus_tag=YPO3568
NC_003143.1	RefSeq	CDS	3980992	3982080	.	+	0	ID=cds3285;Name=YP_002348455.1;Parent=gene3451;Dbxref=InterPro:IPR001254,InterPro:IPR001478,InterPro:IPR001940,InterPro:IPR009003,InterPro:IPR011783,UniProtKB%2FTrEMBL:Q7CL94,Genbank:YP_002348455.1,GeneID:1176388;gbkey=CDS;gene=degS;product=serine endoprotease;protein_id=YP_002348455.1;transl_table=11
NC_003143.1	RefSeq	region	3980992	3981057	.	+	.	ID=id2573;Note=1 probable transmembrane helix predicted;Dbxref=GeneID:1176388;gbkey=misc_feature;gene=degS
NC_003143.1	RefSeq	region	3981079	3981102	.	+	.	ID=id2574;Note=PS00017 ATP%2FGTP-binding site motif A %28P-loop%29.;Dbxref=GeneID:1176388;gbkey=misc_feature;gene=degS
NC_003143.1	RefSeq	gene	3982261	3983523	.	-	.	ID=gene3452;Name=murA;Dbxref=GeneID:1176389;gbkey=Gene;gene=murA;gene_synonym=murZ;locus_tag=YPO3569
NC_003143.1	RefSeq	CDS	3982261	3983523	.	-	0	ID=cds3286;Name=YP_002348456.1;Parent=gene3452;Note=adds enolpyruvyl to UDP-N-acetylglucosamine as a component of cell wall formation%3B gram-positive bacteria have 2 copies of MurA which are active;Dbxref=InterPro:IPR001986,InterPro:IPR005750,InterPro:IPR013792,UniProtKB%2FTrEMBL:Q0WB82,Genbank:YP_002348456.1,GeneID:1176389;gbkey=CDS;gene=murA;product=UDP-N-acetylglucosamine 1-carboxyvinyltransferase;protein_id=YP_002348456.1;transl_table=11
NC_003143.1	RefSeq	gene	3983677	3983940	.	-	.	ID=gene3453;Name=YPO3570;Dbxref=GeneID:1176390;gbkey=Gene;locus_tag=YPO3570
NC_003143.1	RefSeq	CDS	3983677	3983940	.	-	0	ID=cds3287;Name=YP_002348457.1;Parent=gene3453;Dbxref=InterPro:IPR002634,UniProtKB%2FTrEMBL:Q7CL93,Genbank:YP_002348457.1,GeneID:1176390;gbkey=CDS;product=BolA-like protein;protein_id=YP_002348457.1;transl_table=11
NC_003143.1	RefSeq	gene	3984078	3984380	.	-	.	ID=gene3454;Name=YPO3571;Dbxref=GeneID:1176391;gbkey=Gene;locus_tag=YPO3571
NC_003143.1	RefSeq	CDS	3984078	3984380	.	-	0	ID=cds3288;Name=YP_002348458.1;Parent=gene3454;Dbxref=InterPro:IPR002645,UniProtKB%2FTrEMBL:Q7CL92,Genbank:YP_002348458.1,GeneID:1176391;gbkey=CDS;product=anti-sigma B factor antagonist;protein_id=YP_002348458.1;transl_table=11
NC_003143.1	RefSeq	gene	3984416	3985039	.	-	.	ID=gene3455;Name=yrbC;Dbxref=GeneID:1176392;gbkey=Gene;gene=yrbC;locus_tag=YPO3572
NC_003143.1	RefSeq	CDS	3984416	3985039	.	-	0	ID=cds3289;Name=YP_002348459.1;Parent=gene3455;Dbxref=InterPro:IPR008869,UniProtKB%2FTrEMBL:Q7CL91,Genbank:YP_002348459.1,GeneID:1176392;gbkey=CDS;gene=yrbC;product=hypothetical protein;protein_id=YP_002348459.1;transl_table=11
NC_003143.1	RefSeq	gene	3985052	3985609	.	-	.	ID=gene3456;Name=yrbD;Dbxref=GeneID:1176393;gbkey=Gene;gene=yrbD;locus_tag=YPO3573
NC_003143.1	RefSeq	CDS	3985052	3985609	.	-	0	ID=cds3290;Name=YP_002348460.1;Parent=gene3456;Dbxref=InterPro:IPR003399,UniProtKB%2FTrEMBL:Q0WB78,Genbank:YP_002348460.1,GeneID:1176393;gbkey=CDS;gene=yrbD;product=hypothetical protein;protein_id=YP_002348460.1;transl_table=11
NC_003143.1	RefSeq	region	3985520	3985585	.	-	.	ID=id2575;Note=1 probable transmembrane helix predicted;Dbxref=GeneID:1176393;gbkey=misc_feature;gene=yrbD
NC_003143.1	RefSeq	gene	3985614	3986396	.	-	.	ID=gene3457;Name=yrbE;Dbxref=GeneID:1176394;gbkey=Gene;gene=yrbE;locus_tag=YPO3574
NC_003143.1	RefSeq	CDS	3985614	3986396	.	-	0	ID=cds3291;Name=YP_002348461.1;Parent=gene3457;Dbxref=InterPro:IPR003453,UniProtKB%2FTrEMBL:Q7CL90,Genbank:YP_002348461.1,GeneID:1176394;gbkey=CDS;gene=yrbE;product=hypothetical protein;protein_id=YP_002348461.1;transl_table=11
NC_003143.1	RefSeq	gene	3986614	3987432	.	-	.	ID=gene3458;Name=yrbF;Dbxref=GeneID:1176395;gbkey=Gene;gene=yrbF;locus_tag=YPO3575
NC_003143.1	RefSeq	CDS	3986614	3987432	.	-	0	ID=cds3292;Name=YP_002348462.1;Parent=gene3458;Note=ATP-binding subunit of a  ABC toluene efflux transporter;Dbxref=InterPro:IPR003439,InterPro:IPR003593,UniProtKB%2FTrEMBL:Q7CL89,Genbank:YP_002348462.1,GeneID:1176395;gbkey=CDS;gene=yrbF;product=ABC transporter ATP-binding protein YrbF;protein_id=YP_002348462.1;transl_table=11
NC_003143.1	RefSeq	region	3986947	3986991	.	-	.	ID=id2576;Note=PS00211 ABC transporters family signature.;Dbxref=GeneID:1176395;gbkey=misc_feature;gene=yrbF
NC_003143.1	RefSeq	region	3987280	3987303	.	-	.	ID=id2577;Note=PS00017 ATP%2FGTP-binding site motif A %28P-loop%29.;Dbxref=GeneID:1176395;gbkey=misc_feature;gene=yrbF
NC_003143.1	RefSeq	gene	3987697	3988671	.	+	.	ID=gene3459;Name=yrbG;Dbxref=GeneID:1176396;gbkey=Gene;gene=yrbG;locus_tag=YPO3576
NC_003143.1	RefSeq	CDS	3987697	3988671	.	+	0	ID=cds3293;Name=YP_002348463.1;Parent=gene3459;Note=YrbG%3B inner membrane protein involved in cell envelope integrity%3B sodium ion%2Fcalcium ion exchanger%3B in E. coli it is non essential for cell viability%3B member of the YRBG family of cation%2FCa2%2B exchangers;Dbxref=InterPro:IPR004481,InterPro:IPR004837,UniProtKB%2FTrEMBL:Q7CL88,Genbank:YP_002348463.1,GeneID:1176396;gbkey=CDS;gene=yrbG;product=calcium%2Fsodium:proton antiporter;protein_id=YP_002348463.1;transl_table=11
NC_003143.1	RefSeq	gene	3988782	3989768	.	+	.	ID=gene3460;Name=YPO3577;Dbxref=GeneID:1176397;gbkey=Gene;locus_tag=YPO3577
NC_003143.1	RefSeq	CDS	3988782	3989768	.	+	0	ID=cds3294;Name=YP_002348464.1;Parent=gene3460;Dbxref=InterPro:IPR000644,InterPro:IPR001347,InterPro:IPR004800,UniProtKB%2FTrEMBL:Q0WB74,Genbank:YP_002348464.1,GeneID:1176397;gbkey=CDS;product=D-arabinose 5-phosphate isomerase;protein_id=YP_002348464.1;transl_table=11
NC_003143.1	RefSeq	gene	3990017	3990580	.	+	.	ID=gene3461;Name=YPO3578;Dbxref=GeneID:1176398;gbkey=Gene;locus_tag=YPO3578
NC_003143.1	RefSeq	CDS	3990017	3990580	.	+	0	ID=cds3295;Name=YP_002348465.1;Parent=gene3461;Note=forms homotetramers%3B catalyzes hydrolysis of KDO 8-P to KDO and inorganic phosphate%3B functions in lipopolysaccharide biosynthesis;Dbxref=InterPro:IPR006549,InterPro:IPR008230,InterPro:IPR010023,InterPro:IPR013200,UniProtKB%2FTrEMBL:Q0WB73,Genbank:YP_002348465.1,GeneID:1176398;gbkey=CDS;product=3-deoxy-D-manno-octulosonate 8-phosphate phosphatase;protein_id=YP_002348465.1;transl_table=11
NC_003143.1	RefSeq	gene	3990577	3991140	.	+	.	ID=gene3462;Name=yrbK;Dbxref=GeneID:1176399;gbkey=Gene;gene=yrbK;locus_tag=YPO3579
NC_003143.1	RefSeq	CDS	3990577	3991140	.	+	0	ID=cds3296;Name=YP_002348466.1;Parent=gene3462;Dbxref=InterPro:IPR010664,UniProtKB%2FTrEMBL:Q7CL87,Genbank:YP_002348466.1,GeneID:1176399;gbkey=CDS;gene=yrbK;product=hypothetical protein;protein_id=YP_002348466.1;transl_table=11
NC_003143.1	RefSeq	gene	3991124	3991669	.	+	.	ID=gene3463;Name=yrbK;Dbxref=GeneID:1176400;gbkey=Gene;gene=yrbK;locus_tag=YPO3580
NC_003143.1	RefSeq	CDS	3991124	3991669	.	+	0	ID=cds3297;Name=YP_002348467.1;Parent=gene3463;Note=LptA%3B periplasmic binding protein part of a  ABC superfamily of uptake transporters%3B interacts with LptB protein%2C the ATP binding component of the uptake system;Dbxref=InterPro:IPR005653,UniProtKB%2FTrEMBL:Q0WB71,Genbank:YP_002348467.1,GeneID:1176400;gbkey=CDS;product=lipopolysaccharide transport periplasmic protein LptA;protein_id=YP_002348467.1;transl_table=11
NC_003143.1	RefSeq	gene	3991676	3992401	.	+	.	ID=gene3464;Name=yhbG;Dbxref=GeneID:1176401;gbkey=Gene;gene=yhbG;locus_tag=YPO3581
NC_003143.1	RefSeq	CDS	3991676	3992401	.	+	0	ID=cds3298;Name=YP_002348468.1;Parent=gene3464;Dbxref=InterPro:IPR003439,InterPro:IPR003593,UniProtKB%2FTrEMBL:Q7CL86,Genbank:YP_002348468.1,GeneID:1176401;gbkey=CDS;gene=yhbG;product=ABC transporter ATP-binding protein YhbG;protein_id=YP_002348468.1;transl_table=11
NC_003143.1	RefSeq	region	3991781	3991804	.	+	.	ID=id2578;Note=PS00017 ATP%2FGTP-binding site motif A %28P-loop%29.;Dbxref=GeneID:1176401;gbkey=misc_feature;gene=yhbG
NC_003143.1	RefSeq	region	3992087	3992131	.	+	.	ID=id2579;Note=PS00211 ABC transporters family signature.;Dbxref=GeneID:1176401;gbkey=misc_feature;gene=yhbG
NC_003143.1	RefSeq	gene	3992463	3993896	.	+	.	ID=gene3465;Name=rpoN;Dbxref=GeneID:1176402;gbkey=Gene;gene=rpoN;gene_synonym=ntrA,rpoN;locus_tag=YPO3582
NC_003143.1	RefSeq	CDS	3992463	3993896	.	+	0	ID=cds3299;Name=YP_002348469.1;Parent=gene3465;Note=sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released%3B sigma 54 factor is responsible for the expression of enzymes involved in nitrogen assimilation and metabolism%3B the rhizobia often have 2 copies of this sigma factor%3B in Rhizobium etli RpoN1 shown to be involved in the assimilation of several nitrogen and carbon sources during free-living aerobic growth and RpoN2 is involved in symbiotic nitrogen fixation%3B in Bradyrhizobium both RpoN1 and N2 are functional in free-living and symbiotic conditions%2C rpoN1 gene was regulated in response to oxygen;Dbxref=InterPro:IPR000005,InterPro:IPR000394,InterPro:IPR007046,InterPro:IPR007634,UniProtKB%2FTrEMBL:Q7CL85,Genbank:YP_002348469.1,GeneID:1176402;gbkey=CDS;gene=rpoN;product=RNA polymerase factor sigma-54;protein_id=YP_002348469.1;transl_table=11
NC_003143.1	RefSeq	region	3992478	3992597	.	+	.	ID=id2580;Note=PS00041 Bacterial regulatory proteins%2C araC family signature.;Dbxref=GeneID:1176402;gbkey=misc_feature;gene=rpoN
NC_003143.1	RefSeq	region	3993552	3993611	.	+	.	ID=id2581;Note=PS00717 Sigma-54 factors family signature 1.;Dbxref=GeneID:1176402;gbkey=misc_feature;gene=rpoN
NC_003143.1	RefSeq	region	3993555	3993620	.	+	.	ID=id2582;Note=Predicted helix-turn-helix motif with score 1825 %28%2B5.40 SD%29 at aa 365-386%2C sequence MVLADIAQAVDMHESTISRVTT;Dbxref=GeneID:1176402;gbkey=misc_feature;gene=rpoN
NC_003143.1	RefSeq	region	3993825	3993848	.	+	.	ID=id2583;Note=PS00718 Sigma-54 factors family signature 2.;Dbxref=GeneID:1176402;gbkey=misc_feature;gene=rpoN
NC_003143.1	RefSeq	gene	3993920	3994207	.	+	.	ID=gene3466;Name=yhbH;Dbxref=GeneID:1176403;gbkey=Gene;gene=yhbH;locus_tag=YPO3583;pseudo=true
NC_003143.1	RefSeq	region	3993920	3994207	.	+	.	ID=id2584;Note=Similar to Salmonella typhimurium probable sigma %2854%29 modulation protein YhbH SW:RP5M_SALTY %28P26983%29 %2895 aa%29 fasta scores: E%28%29: 1.5e-29%2C 82.1%25 id in 95 aa%2C and to Escherichia coli probable sigma %2854%29 modulation protein YhbH SW:RP5M_ECOLI %28P31221%29 %2895 aa%29 fasta scores: E%28%29: 9.6e-29%2C 81.1%25 id in 95 aa. There is a stop codon at position 36. The sequence has been checked and is believed to be correct;Dbxref=GeneID:1176403;gbkey=misc_feature;gene=yhbH;pseudo=true
NC_003143.1	RefSeq	gene	3994325	3994807	.	+	.	ID=gene3467;Name=ptsN;Dbxref=GeneID:1176404;gbkey=Gene;gene=ptsN;gene_synonym=rpoP;locus_tag=YPO3585
NC_003143.1	RefSeq	CDS	3994325	3994807	.	+	0	ID=cds3300;Name=YP_002348470.1;Parent=gene3467;Dbxref=InterPro:IPR002178,InterPro:IPR006320,UniProtKB%2FTrEMBL:Q0WB68,Genbank:YP_002348470.1,GeneID:1176404;gbkey=CDS;gene=ptsN;product=PTS system transporter subunit IIA-like nitrogen-regulatory protein PtsN;protein_id=YP_002348470.1;transl_table=11
NC_003143.1	RefSeq	region	3994493	3994543	.	+	.	ID=id2585;Note=PS00372 PTS EIIA domains phosphorylation site signature 2.;Dbxref=GeneID:1176404;gbkey=misc_feature;gene=ptsN
NC_003143.1	RefSeq	gene	3995113	3995967	.	+	.	ID=gene3468;Name=YPO3586;Dbxref=GeneID:1176405;gbkey=Gene;locus_tag=YPO3586
NC_003143.1	RefSeq	CDS	3995113	3995967	.	+	0	ID=cds3301;Name=YP_002348471.1;Parent=gene3468;Dbxref=InterPro:IPR005337,UniProtKB%2FTrEMBL:Q0WB67,Genbank:YP_002348471.1,GeneID:1176405;gbkey=CDS;product=hypothetical protein;protein_id=YP_002348471.1;transl_table=11
NC_003143.1	RefSeq	region	3995134	3995157	.	+	.	ID=id2586;Note=PS00017 ATP%2FGTP-binding site motif A %28P-loop%29.;Dbxref=GeneID:1176405;gbkey=misc_feature
NC_003143.1	RefSeq	gene	3995964	3996236	.	+	.	ID=gene3469;Name=ptsO;Dbxref=GeneID:1176406;gbkey=Gene;gene=ptsO;gene_synonym=rpoR;locus_tag=YPO3587
NC_003143.1	RefSeq	CDS	3995964	3996236	.	+	0	ID=cds3302;Name=YP_002348472.1;Parent=gene3469;Dbxref=InterPro:IPR000032,InterPro:IPR001020,InterPro:IPR005698,UniProtKB%2FTrEMBL:Q7CL84,Genbank:YP_002348472.1,GeneID:1176406;gbkey=CDS;gene=ptsO;product=N-regulated PTS system %28Npr%29 phosphohistidinoprotein-hexose phosphotransferase;protein_id=YP_002348472.1;transl_table=11
NC_003143.1	RefSeq	region	3996003	3996026	.	+	.	ID=id2587;Note=PS00369 PTS HPR component histidine phosphorylation site signature.;Dbxref=GeneID:1176406;gbkey=misc_feature;gene=ptsO
NC_003143.1	RefSeq	gene	3996574	3997509	.	+	.	ID=gene3470;Name=pyrB;Dbxref=GeneID:1176407;gbkey=Gene;gene=pyrB;locus_tag=YPO3588
NC_003143.1	RefSeq	CDS	3996574	3997509	.	+	0	ID=cds3303;Name=YP_002348473.1;Parent=gene3470;Note=catalyzes the transfer of the carbamoyl moiety from carbamoyl phosphate to L- aspartate in pyrimidine biosynthesis;Dbxref=InterPro:IPR002082,InterPro:IPR006130,InterPro:IPR006131,InterPro:IPR006132,UniProtKB%2FTrEMBL:Q0WB65,Genbank:YP_002348473.1,GeneID:1176407;gbkey=CDS;gene=pyrB;product=aspartate carbamoyltransferase;protein_id=YP_002348473.1;transl_table=11
NC_003143.1	RefSeq	region	3996718	3996741	.	+	.	ID=id2588;Note=PS00097 Aspartate and ornithine carbamoyltransferases signature.;Dbxref=GeneID:1176407;gbkey=misc_feature;gene=pyrB
NC_003143.1	RefSeq	gene	3997521	3997985	.	+	.	ID=gene3471;Name=pyrI;Dbxref=GeneID:1176408;gbkey=Gene;gene=pyrI;locus_tag=YPO3589
NC_003143.1	RefSeq	CDS	3997521	3997985	.	+	0	ID=cds3304;Name=YP_002348474.1;Parent=gene3471;Note=involved in the allosteric regulation of aspartate carbamoyltransferase;Dbxref=InterPro:IPR002801,InterPro:IPR011069,UniProtKB%2FTrEMBL:Q0WB64,Genbank:YP_002348474.1,GeneID:1176408;gbkey=CDS;gene=pyrI;product=aspartate carbamoyltransferase;protein_id=YP_002348474.1;transl_table=11
NC_003143.1	RefSeq	gene	3998123	3998509	.	+	.	ID=gene3472;Name=YPO3590;Dbxref=GeneID:1176409;gbkey=Gene;locus_tag=YPO3590
NC_003143.1	RefSeq	CDS	3998123	3998509	.	+	0	ID=cds3305;Name=YP_002348475.1;Parent=gene3472;Dbxref=InterPro:IPR006056,InterPro:IPR006175,InterPro:IPR013813,UniProtKB%2FTrEMBL:Q0WB63,Genbank:YP_002348475.1,GeneID:1176409;gbkey=CDS;product=hypothetical protein;protein_id=YP_002348475.1;transl_table=11
NC_003143.1	RefSeq	region	3998429	3998485	.	+	.	ID=id2589;Note=PS01094 Uncharacterized protein family UPF0076 signature.;Dbxref=GeneID:1176409;gbkey=misc_feature
NC_003143.1	RefSeq	repeat_region	3998764	4000717	.	+	.	ID=id2590;Note=insertion sequence:IS100;gbkey=repeat_region
NC_003143.1	RefSeq	repeat_region	3998764	3998791	.	+	.	ID=id2591;Note=IS100 inverted repeat;gbkey=repeat_region
NC_003143.1	RefSeq	gene	3998850	3999872	.	+	.	ID=gene3473;Name=y1093;Dbxref=GeneID:1176410;gbkey=Gene;gene=y1093;gene_synonym=ypmt1;locus_tag=YPO3591
NC_003143.1	RefSeq	CDS	3998850	3999872	.	+	0	ID=cds3306;Name=YP_002348476.1;Parent=gene3473;Dbxref=InterPro:IPR001584,InterPro:IPR006120,InterPro:IPR009057,InterPro:IPR012287,InterPro:IPR012337,UniProtKB%2FTrEMBL:Q7ARN5,Genbank:YP_002348476.1,GeneID:1176410;gbkey=CDS;gene=y1093;product=transposase for insertion sequence IS100;protein_id=YP_002348476.1;transl_table=11
NC_003143.1	RefSeq	region	3998901	3998966	.	+	.	ID=id2592;Note=Predicted helix-turn-helix motif with score 2147 %28%2B6.50 SD%29 at aa 18-39%2C sequence MSSRAIARELGISRNTVKRYLQ;Dbxref=GeneID:1176410;gbkey=misc_feature;gene=y1093
NC_003143.1	RefSeq	gene	3999869	4000651	.	+	.	ID=gene3474;Name=YPO3592;Note=ypmt1.57c;Dbxref=GeneID:1176411;gbkey=Gene;locus_tag=YPO3592
NC_003143.1	RefSeq	CDS	3999869	4000651	.	+	0	ID=cds3307;Name=YP_002348477.1;Parent=gene3474;Dbxref=InterPro:IPR001270,InterPro:IPR002611,InterPro:IPR003593,UniProtKB%2FTrEMBL:Q7ARK4,Genbank:YP_002348477.1,GeneID:1176411;gbkey=CDS;product=transposase%2FIS protein;protein_id=YP_002348477.1;transl_table=11
NC_003143.1	RefSeq	region	4000196	4000219	.	+	.	ID=id2593;Note=PS00017 ATP%2FGTP-binding site motif A %28P-loop%29.;Dbxref=GeneID:1176411;gbkey=misc_feature
NC_003143.1	RefSeq	repeat_region	4000690	4000717	.	-	.	ID=id2594;Note=IS100 inverted repeat;gbkey=repeat_region
NC_003143.1	RefSeq	region	4000715	4000979	.	-	.	ID=id2595;Note=Truncated IS1397-like insertion element: IS1661.;gbkey=misc_feature
NC_003143.1	RefSeq	repeat_region	4000957	4000979	.	-	.	ID=id2596;Note=Inverted repeat for IS1661 insertion element;gbkey=repeat_region
NC_003143.1	RefSeq	gene	4000981	4001718	.	+	.	ID=gene3475;Name=YPO3593;Dbxref=GeneID:1176413;gbkey=Gene;locus_tag=YPO3593;pseudo=true
NC_003143.1	RefSeq	region	4000981	4001718	.	+	.	ID=id2597;Note=The 5%27-region of this CDS has been deleted by either the original IS1661 insertion or by the subsequent insertion of a IS100 element. Similar to Vibrio cholerae hypothetical protein Vca0110 TR:Q9KN55 %28EMBL:AE004353%29 %28589 aa%29 fasta scores: E%28%29: 0%2C 55.5%25 id in 245 aa and to Escherichia coli O157:H7 Z0260 hypothetical protein TR:AAG54529 %28EMBL:AE005198%29 %28616 aa%29 fasta scores: E%28%29: 0%2C53.9%25 id in 245 aa;Dbxref=GeneID:1176413;gbkey=misc_feature;pseudo=true
NC_003143.1	RefSeq	gene	4001721	4002770	.	+	.	ID=gene3476;Name=YPO3594;Dbxref=GeneID:1176414;gbkey=Gene;locus_tag=YPO3594
NC_003143.1	RefSeq	CDS	4001721	4002770	.	+	0	ID=cds3308;Name=YP_002348479.1;Parent=gene3476;Dbxref=InterPro:IPR010732,UniProtKB%2FTrEMBL:Q0WB59,Genbank:YP_002348479.1,GeneID:1176414;gbkey=CDS;product=hypothetical protein;protein_id=YP_002348479.1;transl_table=11
NC_003143.1	RefSeq	gene	4002896	4004212	.	+	.	ID=gene3477;Name=YPO3595;Dbxref=GeneID:1176415;gbkey=Gene;locus_tag=YPO3595
NC_003143.1	RefSeq	CDS	4002896	4004212	.	+	0	ID=cds3309;Name=YP_002348480.1;Parent=gene3477;Dbxref=InterPro:IPR000253,InterPro:IPR008984,UniProtKB%2FTrEMBL:Q7CL26,Genbank:YP_002348480.1,GeneID:1176415;gbkey=CDS;product=hypothetical protein;protein_id=YP_002348480.1;transl_table=11
NC_003143.1	RefSeq	gene	4004212	4004757	.	+	.	ID=gene3478;Name=YPO3596;Dbxref=GeneID:1176416;gbkey=Gene;locus_tag=YPO3596
NC_003143.1	RefSeq	CDS	4004212	4004757	.	+	0	ID=cds3310;Name=YP_002348481.1;Parent=gene3478;Dbxref=UniProtKB%2FTrEMBL:Q7CL27,Genbank:YP_002348481.1,GeneID:1176416;gbkey=CDS;product=lipoprotein;protein_id=YP_002348481.1;transl_table=11
NC_003143.1	RefSeq	region	4004245	4004277	.	+	.	ID=id2598;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site.;Dbxref=GeneID:1176416;gbkey=misc_feature
NC_003143.1	RefSeq	gene	4004760	4006106	.	+	.	ID=gene3479;Name=YPO3597;Dbxref=GeneID:1176417;gbkey=Gene;locus_tag=YPO3597
NC_003143.1	RefSeq	CDS	4004760	4006106	.	+	0	ID=cds3311;Name=YP_002348482.1;Parent=gene3479;Dbxref=InterPro:IPR010263,UniProtKB%2FTrEMBL:Q74PF4,Genbank:YP_002348482.1,GeneID:1176417;gbkey=CDS;product=hypothetical protein;protein_id=YP_002348482.1;transl_table=11
NC_003143.1	RefSeq	gene	4006106	4006873	.	+	.	ID=gene3480;Name=YPO3598;Dbxref=GeneID:1176418;gbkey=Gene;locus_tag=YPO3598
NC_003143.1	RefSeq	CDS	4006106	4006873	.	+	0	ID=cds3312;Name=YP_002348483.1;Parent=gene3480;Dbxref=UniProtKB%2FTrEMBL:Q7CL28,Genbank:YP_002348483.1,GeneID:1176418;gbkey=CDS;product=hypothetical protein;protein_id=YP_002348483.1;transl_table=11
NC_003143.1	RefSeq	region	4006760	4006828	.	+	.	ID=id2599;Note=1 probable transmembrane helix predicted;Dbxref=GeneID:1176418;gbkey=misc_feature
NC_003143.1	RefSeq	gene	4006884	4009487	.	+	.	ID=gene3481;Name=clpB2;Dbxref=GeneID:1176419;gbkey=Gene;gene=clpB2;locus_tag=YPO3599
NC_003143.1	RefSeq	CDS	4006884	4009487	.	+	0	ID=cds3313;Name=YP_002348484.1;Parent=gene3481;Dbxref=InterPro:IPR001270,InterPro:IPR003593,InterPro:IPR013093,UniProtKB%2FTrEMBL:Q7CL29,Genbank:YP_002348484.1,GeneID:1176419;gbkey=CDS;gene=clpB2;product=Clp ATPase;protein_id=YP_002348484.1;transl_table=11
NC_003143.1	RefSeq	region	4007556	4007579	.	+	.	ID=id2600;Note=PS00017 ATP%2FGTP-binding site motif A %28P-loop%29.;Dbxref=GeneID:1176419;gbkey=misc_feature;gene=clpB2
NC_003143.1	RefSeq	region	4007820	4007858	.	+	.	ID=id2601;Note=PS00870 Chaperonins clpA%2FB signature 1.;Dbxref=GeneID:1176419;gbkey=misc_feature;gene=clpB2
NC_003143.1	RefSeq	region	4008714	4008737	.	+	.	ID=id2602;Note=PS00017 ATP%2FGTP-binding site motif A %28P-loop%29.;Dbxref=GeneID:1176419;gbkey=misc_feature;gene=clpB2
NC_003143.1	RefSeq	gene	4009484	4010281	.	+	.	ID=gene3482;Name=clpB2;Dbxref=GeneID:1176420;gbkey=Gene;gene=clpB2;locus_tag=YPO3600
NC_003143.1	RefSeq	CDS	4009484	4010281	.	+	0	ID=cds3314;Name=YP_002348485.1;Parent=gene3482;Note=no significant database hits;Dbxref=InterPro:IPR002197,InterPro:IPR009057,InterPro:IPR012287,UniProtKB%2FTrEMBL:Q7CL30,Genbank:YP_002348485.1,GeneID:1176420;gbkey=CDS;product=hypothetical protein;protein_id=YP_002348485.1;transl_table=11
NC_003143.1	RefSeq	gene	4010278	4010964	.	+	.	ID=gene3483;Name=YPO3601;Dbxref=GeneID:1176421;gbkey=Gene;locus_tag=YPO3601
NC_003143.1	RefSeq	CDS	4010278	4010964	.	+	0	ID=cds3315;Name=YP_002348486.1;Parent=gene3483;Dbxref=UniProtKB%2FTrEMBL:Q0WB52,Genbank:YP_002348486.1,GeneID:1176421;gbkey=CDS;product=hypothetical protein;protein_id=YP_002348486.1;transl_table=11
NC_003143.1	RefSeq	gene	4010961	4012358	.	+	.	ID=gene3484;Name=YPO3602;Dbxref=GeneID:1176422;gbkey=Gene;locus_tag=YPO3602
NC_003143.1	RefSeq	CDS	4010961	4012358	.	+	0	ID=cds3316;Name=YP_002348487.1;Parent=gene3484;Dbxref=InterPro:IPR010657,UniProtKB%2FTrEMBL:Q0WB51,Genbank:YP_002348487.1,GeneID:1176422;gbkey=CDS;product=hypothetical protein;protein_id=YP_002348487.1;transl_table=11
NC_003143.1	RefSeq	gene	4012390	4015923	.	+	.	ID=gene3485;Name=YPO3603;Dbxref=GeneID:1176423;gbkey=Gene;locus_tag=YPO3603
NC_003143.1	RefSeq	CDS	4012390	4015923	.	+	0	ID=cds3317;Name=YP_002348488.1;Parent=gene3485;Dbxref=InterPro:IPR009612,InterPro:IPR010623,UniProtKB%2FTrEMBL:Q74PG0,Genbank:YP_002348488.1,GeneID:1176423;gbkey=CDS;product=hypothetical protein;protein_id=YP_002348488.1;transl_table=11
NC_003143.1	RefSeq	region	4012447	4012479	.	+	.	ID=id2603;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site.;Dbxref=GeneID:1176423;gbkey=misc_feature
NC_003143.1	RefSeq	region	4012795	4012818	.	+	.	ID=id2604;Note=PS00017 ATP%2FGTP-binding site motif A %28P-loop%29.;Dbxref=GeneID:1176423;gbkey=misc_feature
NC_003143.1	RefSeq	gene	4016048	4017360	.	+	.	ID=gene3486;Name=YPO3604;Dbxref=GeneID:1176424;gbkey=Gene;locus_tag=YPO3604;pseudo=true
NC_003143.1	RefSeq	gene	4017382	4019784	.	+	.	ID=gene3487;Name=YPO3606;Dbxref=GeneID:1176426;gbkey=Gene;locus_tag=YPO3606
NC_003143.1	RefSeq	CDS	4017382	4019784	.	+	0	ID=cds3318;Name=YP_002348491.1;Parent=gene3487;Dbxref=InterPro:IPR001757,InterPro:IPR006533,UniProtKB%2FTrEMBL:Q7CL31,Genbank:YP_002348491.1,GeneID:1176426;gbkey=CDS;product=Rhs accessory genetic element;protein_id=YP_002348491.1;transl_table=11
NC_003143.1	RefSeq	region	4017421	4017441	.	+	.	ID=id2605;Note=PS00154 E1-E2 ATPases phosphorylation site.;Dbxref=GeneID:1176426;gbkey=misc_feature
NC_003143.1	RefSeq	region	4019038	4019103	.	+	.	ID=id2606;Note=Predicted helix-turn-helix motif with score 1023 %28%2B2.67 SD%29 at aa 553-574%2C sequence IRLQFLWDRYGQSNDNSSCWIR;Dbxref=GeneID:1176426;gbkey=misc_feature
NC_003143.1	RefSeq	gene	4019790	4020248	.	+	.	ID=gene3488;Name=YPO3607;Dbxref=GeneID:1176427;gbkey=Gene;locus_tag=YPO3607
NC_003143.1	RefSeq	CDS	4019790	4020248	.	+	0	ID=cds3319;Name=YP_002348492.1;Parent=gene3488;Dbxref=UniProtKB%2FTrEMBL:Q7CL32,Genbank:YP_002348492.1,GeneID:1176427;gbkey=CDS;product=hypothetical protein;protein_id=YP_002348492.1;transl_table=11
NC_003143.1	RefSeq	gene	4020241	4024503	.	+	.	ID=gene3489;Name=YPO3608;Dbxref=GeneID:1176428;gbkey=Gene;locus_tag=YPO3608;pseudo=true
NC_003143.1	RefSeq	gene	4024505	4024990	.	+	.	ID=gene3490;Name=YPO3610;Dbxref=GeneID:1176430;gbkey=Gene;locus_tag=YPO3610
NC_003143.1	RefSeq	CDS	4024505	4024990	.	+	0	ID=cds3320;Name=YP_002348495.1;Parent=gene3490;Dbxref=UniProtKB%2FTrEMBL:Q7CL34,Genbank:YP_002348495.1,GeneID:1176430;gbkey=CDS;product=hypothetical protein;protein_id=YP_002348495.1;transl_table=11
NC_003143.1	RefSeq	gene	4025040	4025231	.	-	.	ID=gene3491;Name=YPO3611;Dbxref=GeneID:1176431;gbkey=Gene;locus_tag=YPO3611
NC_003143.1	RefSeq	CDS	4025040	4025231	.	-	0	ID=cds3321;Name=YP_002348496.1;Parent=gene3491;Note=no significant database hits;Dbxref=UniProtKB%2FTrEMBL:Q7CL35,Genbank:YP_002348496.1,GeneID:1176431;gbkey=CDS;product=hypothetical protein;protein_id=YP_002348496.1;transl_table=11
NC_003143.1	RefSeq	gene	4025307	4025531	.	-	.	ID=gene3492;Name=YPO3611a;Dbxref=GeneID:16744776;gbkey=Gene;locus_tag=YPO3611a
NC_003143.1	RefSeq	CDS	4025307	4025531	.	-	0	ID=cds3322;Name=YP_008479729.1;Parent=gene3492;Dbxref=Genbank:YP_008479729.1,GeneID:16744776;gbkey=CDS;product=hypothetical protein;protein_id=YP_008479729.1;transl_table=11
NC_003143.1	RefSeq	gene	4025613	4026020	.	-	.	ID=gene3493;Name=YPO3612;Dbxref=GeneID:1176432;gbkey=Gene;locus_tag=YPO3612
NC_003143.1	RefSeq	CDS	4025613	4026020	.	-	0	ID=cds3323;Name=YP_002348497.1;Parent=gene3493;Dbxref=InterPro:IPR001387,InterPro:IPR010982,UniProtKB%2FTrEMBL:Q0WB41,Genbank:YP_002348497.1,GeneID:1176432;gbkey=CDS;product=transcriptional regulator;protein_id=YP_002348497.1;transl_table=11
NC_003143.1	RefSeq	region	4025865	4025930	.	-	.	ID=id2607;Note=Predicted helix-turn-helix motif with score 1221 %28%2B3.35 SD%29 at aa 31-52%2C sequence KTQKEVATRIGLQLSQYNKYES;Dbxref=GeneID:1176432;gbkey=misc_feature
NC_003143.1	RefSeq	gene	4026381	4028579	.	+	.	ID=gene3494;Name=YPO3613;Dbxref=GeneID:1176433;gbkey=Gene;locus_tag=YPO3613
NC_003143.1	RefSeq	CDS	4026381	4028579	.	+	0	ID=cds3324;Name=YP_002348498.1;Parent=gene3494;Dbxref=InterPro:IPR001757,InterPro:IPR006533,InterPro:IPR010609,UniProtKB%2FTrEMBL:Q0WB40,Genbank:YP_002348498.1,GeneID:1176433;gbkey=CDS;product=Rhs accessory genetic element;protein_id=YP_002348498.1;transl_table=11
NC_003143.1	RefSeq	region	4026420	4026440	.	+	.	ID=id2608;Note=PS00154 E1-E2 ATPases phosphorylation site.;Dbxref=GeneID:1176433;gbkey=misc_feature
NC_003143.1	RefSeq	region	4027857	4027922	.	+	.	ID=id2609;Note=Predicted helix-turn-helix motif with score 1023 %28%2B2.67 SD%29 at aa 493-514%2C sequence IRLQFLWDRYGQSNDNSSCWIR;Dbxref=GeneID:1176433;gbkey=misc_feature
NC_003143.1	RefSeq	gene	4028582	4029004	.	+	.	ID=gene3495;Name=YPO3614;Dbxref=GeneID:1176434;gbkey=Gene;locus_tag=YPO3614
NC_003143.1	RefSeq	CDS	4028582	4029004	.	+	0	ID=cds3325;Name=YP_002348499.1;Parent=gene3495;Dbxref=UniProtKB%2FTrEMBL:Q7CL36,Genbank:YP_002348499.1,GeneID:1176434;gbkey=CDS;product=hypothetical protein;protein_id=YP_002348499.1;transl_table=11
NC_003143.1	RefSeq	gene	4029049	4033587	.	+	.	ID=gene3496;Name=YPO3615;Dbxref=GeneID:1176435;gbkey=Gene;locus_tag=YPO3615
NC_003143.1	RefSeq	CDS	4029049	4033587	.	+	0	ID=cds3326;Name=YP_002348500.1;Parent=gene3496;Dbxref=InterPro:IPR006530,InterPro:IPR008727,UniProtKB%2FTrEMBL:Q0WB38,Genbank:YP_002348500.1,GeneID:1176435;gbkey=CDS;product=hypothetical protein;protein_id=YP_002348500.1;transl_table=11
NC_003143.1	RefSeq	gene	4033596	4034390	.	+	.	ID=gene3497;Name=YPO3616;Dbxref=GeneID:1176436;gbkey=Gene;locus_tag=YPO3616
NC_003143.1	RefSeq	CDS	4033596	4034390	.	+	0	ID=cds3327;Name=YP_002348501.1;Parent=gene3497;Dbxref=UniProtKB%2FTrEMBL:Q7CL37,Genbank:YP_002348501.1,GeneID:1176436;gbkey=CDS;product=hypothetical protein;protein_id=YP_002348501.1;transl_table=11
NC_003143.1	RefSeq	gene	4034737	4035636	.	-	.	ID=gene3498;Name=YPO3617;Dbxref=GeneID:1176437;gbkey=Gene;locus_tag=YPO3617
NC_003143.1	RefSeq	CDS	4034737	4035636	.	-	0	ID=cds3328;Name=YP_002348502.1;Parent=gene3498;Note=no significant database hits;Dbxref=InterPro:IPR012307,UniProtKB%2FTrEMBL:Q7CL38,Genbank:YP_002348502.1,GeneID:1176437;gbkey=CDS;product=hypothetical protein;protein_id=YP_002348502.1;transl_table=11
NC_003143.1	RefSeq	gene	4035633	4036763	.	-	.	ID=gene3499;Name=YPO3618;Dbxref=GeneID:1176438;gbkey=Gene;locus_tag=YPO3618
NC_003143.1	RefSeq	CDS	4035633	4036763	.	-	0	ID=cds3329;Name=YP_002348503.1;Parent=gene3499;Dbxref=InterPro:IPR000683,UniProtKB%2FTrEMBL:Q7CL39,Genbank:YP_002348503.1,GeneID:1176438;gbkey=CDS;product=oxidoreductase;protein_id=YP_002348503.1;transl_table=11
NC_003143.1	RefSeq	gene	4036958	4037899	.	+	.	ID=gene3500;Name=YPO3619;Dbxref=GeneID:1176439;gbkey=Gene;locus_tag=YPO3619
NC_003143.1	RefSeq	CDS	4036958	4037899	.	+	0	ID=cds3330;Name=YP_002348504.1;Parent=gene3500;Dbxref=InterPro:IPR000005,InterPro:IPR003313,InterPro:IPR009057,InterPro:IPR011051,InterPro:IPR012287,UniProtKB%2FTrEMBL:Q7CL40,Genbank:YP_002348504.1,GeneID:1176439;gbkey=CDS;product=AraC family transcriptional regulator;protein_id=YP_002348504.1;transl_table=11
NC_003143.1	RefSeq	region	4037612	4037677	.	+	.	ID=id2610;Note=Predicted helix-turn-helix motif with score 989 %28%2B2.56 SD%29 at aa 219-240%2C sequence WDIDKFMQYCQVSKSQLFRLFQ;Dbxref=GeneID:1176439;gbkey=misc_feature
NC_003143.1	RefSeq	gene	4038061	4038564	.	-	.	ID=gene3501;Name=YPO3620;Dbxref=GeneID:1176440;gbkey=Gene;locus_tag=YPO3620
NC_003143.1	RefSeq	CDS	4038061	4038564	.	-	0	ID=cds3331;Name=YP_002348505.1;Parent=gene3501;Dbxref=InterPro:IPR007721,UniProtKB%2FTrEMBL:Q7CL41,Genbank:YP_002348505.1,GeneID:1176440;gbkey=CDS;product=carbohydrate transport protein;protein_id=YP_002348505.1;transl_table=11
NC_003143.1	RefSeq	gene	4038570	4039502	.	-	.	ID=gene3502;Name=YPO3621;Dbxref=GeneID:1176441;gbkey=Gene;locus_tag=YPO3621
NC_003143.1	RefSeq	CDS	4038570	4039502	.	-	0	ID=cds3332;Name=YP_002348506.1;Parent=gene3502;Dbxref=InterPro:IPR002139,InterPro:IPR002173,InterPro:IPR002328,InterPro:IPR011611,UniProtKB%2FTrEMBL:Q7CL42,Genbank:YP_002348506.1,GeneID:1176441;gbkey=CDS;product=carbohydrate kinase;protein_id=YP_002348506.1;transl_table=11
NC_003143.1	RefSeq	region	4038726	4038767	.	-	.	ID=id2611;Note=PS00584 pfkB family of carbohydrate kinases signature 2.;Dbxref=GeneID:1176441;gbkey=misc_feature
NC_003143.1	RefSeq	region	4039260	4039304	.	-	.	ID=id2612;Note=PS00059 Zinc-containing alcohol dehydrogenases signature.;Dbxref=GeneID:1176441;gbkey=misc_feature
NC_003143.1	RefSeq	gene	4039656	4040357	.	-	.	ID=gene3503;Name=YPO3622;Dbxref=GeneID:1176442;gbkey=Gene;locus_tag=YPO3622
NC_003143.1	RefSeq	CDS	4039656	4040357	.	-	0	ID=cds3333;Name=YP_002348507.1;Parent=gene3503;Dbxref=InterPro:IPR002915,InterPro:IPR011343,UniProtKB%2FTrEMBL:Q7CL43,Genbank:YP_002348507.1,GeneID:1176442;gbkey=CDS;product=deoxyribose-phosphate aldolase;protein_id=YP_002348507.1;transl_table=11
NC_003143.1	RefSeq	gene	4040828	4041409	.	+	.	ID=gene3504;Name=ssuE;Dbxref=GeneID:1176443;gbkey=Gene;gene=ssuE;locus_tag=YPO3623
NC_003143.1	RefSeq	CDS	4040828	4041409	.	+	0	ID=cds3334;Name=YP_002348508.1;Parent=gene3504;Dbxref=InterPro:IPR005025,UniProtKB%2FTrEMBL:Q7CL44,Genbank:YP_002348508.1,GeneID:1176443;gbkey=CDS;gene=ssuE;product=NAD%28P%29H-dependent FMN reductase;protein_id=YP_002348508.1;transl_table=11
NC_003143.1	RefSeq	gene	4041424	4042545	.	+	.	ID=gene3505;Name=ssuA;Dbxref=GeneID:1176444;gbkey=Gene;gene=ssuA;locus_tag=YPO3624
NC_003143.1	RefSeq	CDS	4041424	4042545	.	+	0	ID=cds3335;Name=YP_002348509.1;Parent=gene3505;Note=part of the ABC type transport system SsuABC for aliphatic sulfonates%3B with SsuA being the periplasmic subunit SsuB the ATP-binding subunit and SsuC the permease;Dbxref=InterPro:IPR001638,InterPro:IPR007210,InterPro:IPR010067,UniProtKB%2FTrEMBL:Q0WB29,Genbank:YP_002348509.1,GeneID:1176444;gbkey=CDS;gene=ssuA;product=alkanesulfonate transporter substrate-binding protein;protein_id=YP_002348509.1;transl_table=11
NC_003143.1	RefSeq	gene	4042564	4043712	.	+	.	ID=gene3506;Name=ssuD;Dbxref=GeneID:1176445;gbkey=Gene;gene=ssuD;locus_tag=YPO3625
NC_003143.1	RefSeq	CDS	4042564	4043712	.	+	0	ID=cds3336;Name=YP_002348510.1;Parent=gene3506;Note=catalyzes the release of sulfite from alkanesulfonates;Dbxref=InterPro:IPR011251,UniProtKB%2FTrEMBL:Q0WB28,Genbank:YP_002348510.1,GeneID:1176445;gbkey=CDS;gene=ssuD;product=alkanesulfonate monooxygenase;protein_id=YP_002348510.1;transl_table=11
NC_003143.1	RefSeq	gene	4043721	4044518	.	+	.	ID=gene3507;Name=ssuC;Dbxref=GeneID:1176446;gbkey=Gene;gene=ssuC;locus_tag=YPO3626
NC_003143.1	RefSeq	CDS	4043721	4044518	.	+	0	ID=cds3337;Name=YP_002348511.1;Parent=gene3507;Dbxref=InterPro:IPR000515,UniProtKB%2FTrEMBL:Q7CL45,Genbank:YP_002348511.1,GeneID:1176446;gbkey=CDS;gene=ssuC;product=aliphatic sulfonates transporter permease;protein_id=YP_002348511.1;transl_table=11
NC_003143.1	RefSeq	gene	4044515	4045330	.	+	.	ID=gene3508;Name=ssuB;Dbxref=GeneID:1176447;gbkey=Gene;gene=ssuB;locus_tag=YPO3627
NC_003143.1	RefSeq	CDS	4044515	4045330	.	+	0	ID=cds3338;Name=YP_002348512.1;Parent=gene3508;Note=part of the ABC type transport system SsuABC for aliphatic sulfonates%3B with SsuA being the periplasmic substrate-binding subunit%2C SsuB the ATP-binding subunit and SsuC the permease;Dbxref=InterPro:IPR003439,InterPro:IPR003593,UniProtKB%2FTrEMBL:Q74PI5,Genbank:YP_002348512.1,GeneID:1176447;gbkey=CDS;gene=ssuB;product=aliphatic sulfonates transporter ATP-binding protein;protein_id=YP_002348512.1;transl_table=11
NC_003143.1	RefSeq	region	4044647	4044670	.	+	.	ID=id2613;Note=PS00017 ATP%2FGTP-binding site motif A %28P-loop%29.;Dbxref=GeneID:1176447;gbkey=misc_feature;gene=ssuB
NC_003143.1	RefSeq	region	4044914	4044958	.	+	.	ID=id2614;Note=PS00211 ABC transporters family signature.;Dbxref=GeneID:1176447;gbkey=misc_feature;gene=ssuB
NC_003143.1	RefSeq	gene	4046606	4047961	.	+	.	ID=gene3509;Name=yjcD;Dbxref=GeneID:1176449;gbkey=Gene;gene=yjcD;locus_tag=YPO3629
NC_003143.1	RefSeq	CDS	4046606	4047961	.	+	0	ID=cds3339;Name=YP_002348514.1;Parent=gene3509;Dbxref=InterPro:IPR006043,UniProtKB%2FTrEMBL:Q7CL47,Genbank:YP_002348514.1,GeneID:1176449;gbkey=CDS;gene=yjcD;product=xanthine%2Furacil permease;protein_id=YP_002348514.1;transl_table=11
NC_003143.1	RefSeq	region	4047587	4047610	.	+	.	ID=id2615;Note=PS00017 ATP%2FGTP-binding site motif A %28P-loop%29.;Dbxref=GeneID:1176449;gbkey=misc_feature;gene=yjcD
NC_003143.1	RefSeq	gene	4048310	4049959	.	+	.	ID=gene3510;Name=yjcE;Dbxref=GeneID:1176450;gbkey=Gene;gene=yjcE;locus_tag=YPO3630
NC_003143.1	RefSeq	CDS	4048310	4049959	.	+	0	ID=cds3340;Name=YP_002348515.1;Parent=gene3510;Dbxref=InterPro:IPR004705,InterPro:IPR006153,UniProtKB%2FTrEMBL:Q0WB23,Genbank:YP_002348515.1,GeneID:1176450;gbkey=CDS;gene=yjcE;product=Na%28%2B%29%2FH%28%2B%29 exchanger protein;protein_id=YP_002348515.1;transl_table=11
NC_003143.1	RefSeq	gene	4050177	4051364	.	-	.	ID=gene3511;Name=YPO3631;Dbxref=GeneID:1176451;gbkey=Gene;locus_tag=YPO3631
NC_003143.1	RefSeq	CDS	4050177	4051364	.	-	0	ID=cds3341;Name=YP_002348516.1;Parent=gene3511;Note=no significant database matches;Dbxref=InterPro:IPR010916,UniProtKB%2FTrEMBL:Q0WB22,Genbank:YP_002348516.1,GeneID:1176451;gbkey=CDS;product=hypothetical protein;protein_id=YP_002348516.1;transl_table=11
NC_003143.1	RefSeq	region	4051287	4051364	.	-	.	ID=id2616;Note=PS00430 TonB-dependent receptor proteins signature 1.;Dbxref=GeneID:1176451;gbkey=misc_feature
NC_003143.1	RefSeq	gene	4051516	4052436	.	-	.	ID=gene3512;Name=ddg;Dbxref=GeneID:1176452;gbkey=Gene;gene=ddg;locus_tag=YPO3632
NC_003143.1	RefSeq	CDS	4051516	4052436	.	-	0	ID=cds3342;Name=YP_002348517.1;Parent=gene3512;Note=Acylates the intermediate %28KDO%292-lipid IVA to form %28KDO%292-%28palmitoleoyl%29-lipid IVA in cells subjected to cold shock;Dbxref=InterPro:IPR004960,InterPro:IPR011920,UniProtKB%2FTrEMBL:Q0WB21,Genbank:YP_002348517.1,GeneID:1176452;gbkey=CDS;gene=ddg;product=lipid A biosynthesis palmitoleoyl acyltransferase;protein_id=YP_002348517.1;transl_table=11
NC_003143.1	RefSeq	region	4052323	4052388	.	-	.	ID=id2617;Note=1 probable transmembrane helix predicted;Dbxref=GeneID:1176452;gbkey=misc_feature;gene=ddg
NC_003143.1	RefSeq	gene	4053161	4054219	.	+	.	ID=gene3513;Name=YPO3633;Dbxref=GeneID:1176453;gbkey=Gene;locus_tag=YPO3633
NC_003143.1	RefSeq	CDS	4053161	4054219	.	+	0	ID=cds3343;Name=YP_002348518.1;Parent=gene3513;Dbxref=UniProtKB%2FTrEMBL:Q7CL48,Genbank:YP_002348518.1,GeneID:1176453;gbkey=CDS;product=periplasmic binding protein;protein_id=YP_002348518.1;transl_table=11
NC_003143.1	RefSeq	region	4053236	4053304	.	+	.	ID=id2618;Note=1 probable transmembrane helix predicted;Dbxref=GeneID:1176453;gbkey=misc_feature
NC_003143.1	RefSeq	gene	4054423	4055919	.	+	.	ID=gene3514;Name=YPO3634;Dbxref=GeneID:1176454;gbkey=Gene;locus_tag=YPO3634
NC_003143.1	RefSeq	CDS	4054423	4055919	.	+	0	ID=cds3344;Name=YP_002348519.1;Parent=gene3514;Dbxref=InterPro:IPR003439,InterPro:IPR003593,UniProtKB%2FTrEMBL:Q7CL49,Genbank:YP_002348519.1,GeneID:1176454;gbkey=CDS;product=ABC transporter ATP-binding protein;protein_id=YP_002348519.1;transl_table=11
NC_003143.1	RefSeq	region	4054540	4054563	.	+	.	ID=id2619;Note=PS00017 ATP%2FGTP-binding site motif A %28P-loop%29.;Dbxref=GeneID:1176454;gbkey=misc_feature
NC_003143.1	RefSeq	region	4055623	4055667	.	+	.	ID=id2620;Note=PS00211 ABC transporters family signature.;Dbxref=GeneID:1176454;gbkey=misc_feature
NC_003143.1	RefSeq	gene	4055912	4056901	.	+	.	ID=gene3515;Name=YPO3635;Dbxref=GeneID:1176455;gbkey=Gene;locus_tag=YPO3635
NC_003143.1	RefSeq	CDS	4055912	4056901	.	+	0	ID=cds3345;Name=YP_002348520.1;Parent=gene3515;Dbxref=InterPro:IPR001851,UniProtKB%2FTrEMBL:Q7CL50,Genbank:YP_002348520.1,GeneID:1176455;gbkey=CDS;product=branched-chain amino acid transporter permease;protein_id=YP_002348520.1;transl_table=11
NC_003143.1	RefSeq	gene	4056903	4057856	.	+	.	ID=gene3516;Name=YPO3636;Dbxref=GeneID:1176456;gbkey=Gene;locus_tag=YPO3636
NC_003143.1	RefSeq	CDS	4056903	4057856	.	+	0	ID=cds3346;Name=YP_002348521.1;Parent=gene3516;Dbxref=InterPro:IPR001851,UniProtKB%2FTrEMBL:Q7CL51,Genbank:YP_002348521.1,GeneID:1176456;gbkey=CDS;product=ABC transporter permease;protein_id=YP_002348521.1;transl_table=11
NC_003143.1	RefSeq	gene	4057875	4059512	.	+	.	ID=gene3517;Name=YPO3637;Dbxref=GeneID:1176457;gbkey=Gene;locus_tag=YPO3637
NC_003143.1	RefSeq	CDS	4057875	4059512	.	+	0	ID=cds3347;Name=YP_002348522.1;Parent=gene3517;Dbxref=InterPro:IPR000577,InterPro:IPR006003,UniProtKB%2FTrEMBL:Q0WB16,Genbank:YP_002348522.1,GeneID:1176457;gbkey=CDS;product=carbohydrate kinase;protein_id=YP_002348522.1;transl_table=11
NC_003143.1	RefSeq	region	4058916	4058963	.	+	.	ID=id2621;Note=PS00038 Myc-type%2C %27helix-loop-helix%27 dimerization domain signature.;Dbxref=GeneID:1176457;gbkey=misc_feature
NC_003143.1	RefSeq	region	4059375	4059398	.	+	.	ID=id2622;Note=PS00017 ATP%2FGTP-binding site motif A %28P-loop%29.;Dbxref=GeneID:1176457;gbkey=misc_feature
NC_003143.1	RefSeq	gene	4059509	4060114	.	+	.	ID=gene3518;Name=YPO3638;Dbxref=GeneID:1176458;gbkey=Gene;locus_tag=YPO3638
NC_003143.1	RefSeq	CDS	4059509	4060114	.	+	0	ID=cds3348;Name=YP_002348523.1;Parent=gene3518;Dbxref=InterPro:IPR001347,UniProtKB%2FTrEMBL:Q7CL52,Genbank:YP_002348523.1,GeneID:1176458;gbkey=CDS;product=phosphosugar isomerase%2Fbinding protein;protein_id=YP_002348523.1;transl_table=11
NC_003143.1	RefSeq	gene	4060304	4061158	.	-	.	ID=gene3519;Name=yghU;Dbxref=GeneID:1176459;gbkey=Gene;gene=yghU;locus_tag=YPO3639
NC_003143.1	RefSeq	CDS	4060304	4061158	.	-	0	ID=cds3349;Name=YP_002348524.1;Parent=gene3519;Note=YghU%3B B2989%3B one of eight  glutathione transferase proteins from E. coli;Dbxref=InterPro:IPR004045,InterPro:IPR004046,InterPro:IPR010987,InterPro:IPR012336,UniProtKB%2FTrEMBL:Q7CL53,Genbank:YP_002348524.1,GeneID:1176459;gbkey=CDS;gene=yghU;product=glutathione S-transferase YghU;protein_id=YP_002348524.1;transl_table=11
NC_003143.1	RefSeq	gene	4061409	4062755	.	+	.	ID=gene3520;Name=YPO3640;Dbxref=GeneID:1176460;gbkey=Gene;locus_tag=YPO3640
NC_003143.1	RefSeq	CDS	4061409	4062755	.	+	0	ID=cds3350;Name=YP_002348525.1;Parent=gene3520;Dbxref=InterPro:IPR002016,UniProtKB%2FTrEMBL:Q7CL54,Genbank:YP_002348525.1,GeneID:1176460;gbkey=CDS;product=hypothetical protein;protein_id=YP_002348525.1;transl_table=11
NC_003143.1	RefSeq	region	4061487	4061519	.	+	.	ID=id2623;Note=PS00435 Peroxidases proximal heme-ligand signature.;Dbxref=GeneID:1176460;gbkey=misc_feature
NC_003143.1	RefSeq	gene	4062862	4064037	.	-	.	ID=gene3521;Name=YPO3641;Dbxref=GeneID:1176461;gbkey=Gene;locus_tag=YPO3641
NC_003143.1	RefSeq	CDS	4062862	4064037	.	-	0	ID=cds3351;Name=YP_002348526.1;Parent=gene3521;Note=no significant database hits;Dbxref=InterPro:IPR001623,UniProtKB%2FTrEMBL:Q7CL55,Genbank:YP_002348526.1,GeneID:1176461;gbkey=CDS;product=hypothetical protein;protein_id=YP_002348526.1;transl_table=11
NC_003143.1	RefSeq	repeat_region	4064297	4065008	.	+	.	ID=id2624;Note=Contains a %27A%27 at nucleotide position 315%7EIS200-like insertion sequence:IS1541;gbkey=repeat_region
NC_003143.1	RefSeq	gene	4064442	4064900	.	+	.	ID=gene3522;Name=tnp;Dbxref=GeneID:1176462;gbkey=Gene;gene=tnp;locus_tag=YPO3642
NC_003143.1	RefSeq	CDS	4064442	4064900	.	+	0	ID=cds3352;Name=YP_002348527.1;Parent=gene3522;Dbxref=InterPro:IPR002686,UniProtKB%2FTrEMBL:Q56938,Genbank:YP_002348527.1,GeneID:1176462;gbkey=CDS;gene=tnp;product=transposase for the IS1541 insertion element;protein_id=YP_002348527.1;transl_table=11
NC_003143.1	RefSeq	gene	4065032	4065469	.	+	.	ID=gene3523;Name=YPO3642a;Dbxref=GeneID:16744777;gbkey=Gene;locus_tag=YPO3642a
NC_003143.1	RefSeq	ncRNA	4065032	4065469	.	+	.	ID=rna73;Parent=gene3523;Dbxref=GeneID:16744777;gbkey=ncRNA;ncrna_class=other;product=ncRNA-cspA thermoregulator
NC_003143.1	RefSeq	exon	4065032	4065469	.	+	.	ID=id2625;Parent=rna73;Dbxref=GeneID:16744777;gbkey=ncRNA;ncrna_class=other;product=ncRNA-cspA thermoregulator
NC_003143.1	RefSeq	gene	4065083	4065295	.	-	.	ID=gene3524;Name=cspa2;Dbxref=GeneID:1176463;gbkey=Gene;gene=cspa2;locus_tag=YPO3643
NC_003143.1	RefSeq	CDS	4065083	4065295	.	-	0	ID=cds3353;Name=YP_002348528.1;Parent=gene3524;Dbxref=InterPro:IPR002059,InterPro:IPR008994,InterPro:IPR011129,InterPro:IPR012156,InterPro:IPR012340,UniProtKB%2FTrEMBL:O34279,Genbank:YP_002348528.1,GeneID:1176463;gbkey=CDS;gene=cspa2;product=cold-shock protein CspA;protein_id=YP_002348528.1;transl_table=11
NC_003143.1	RefSeq	region	4065185	4065244	.	-	.	ID=id2626;Note=PS00352 %27Cold-shock%27 DNA-binding domain signature.;Dbxref=GeneID:1176463;gbkey=misc_feature;gene=cspa2
NC_003143.1	RefSeq	gene	4065504	4065946	.	+	.	ID=gene3525;Name=YPO3642b;Dbxref=GeneID:16744778;gbkey=Gene;locus_tag=YPO3642b
NC_003143.1	RefSeq	ncRNA	4065504	4065946	.	+	.	ID=rna74;Parent=gene3525;Dbxref=GeneID:16744778;gbkey=ncRNA;ncrna_class=other;product=ncRNA-cspA thermoregulator
NC_003143.1	RefSeq	exon	4065504	4065946	.	+	.	ID=id2627;Parent=rna74;Dbxref=GeneID:16744778;gbkey=ncRNA;ncrna_class=other;product=ncRNA-cspA thermoregulator
NC_003143.1	RefSeq	gene	4065555	4065767	.	-	.	ID=gene3526;Name=cspa1;Dbxref=GeneID:1176464;gbkey=Gene;gene=cspa1;locus_tag=YPO3644
NC_003143.1	RefSeq	CDS	4065555	4065767	.	-	0	ID=cds3354;Name=YP_002348529.1;Parent=gene3526;Dbxref=InterPro:IPR002059,InterPro:IPR008994,InterPro:IPR011129,InterPro:IPR012156,InterPro:IPR012340,UniProtKB%2FTrEMBL:Q74PK2,Genbank:YP_002348529.1,GeneID:1176464;gbkey=CDS;gene=cspa1;product=cold-shock protein CspA;protein_id=YP_002348529.1;transl_table=11
NC_003143.1	RefSeq	region	4065657	4065716	.	-	.	ID=id2628;Note=PS00352 %27Cold-shock%27 DNA-binding domain signature.;Dbxref=GeneID:1176464;gbkey=misc_feature;gene=cspa1
NC_003143.1	RefSeq	gene	4066300	4066767	.	-	.	ID=gene3527;Name=pcp;Dbxref=GeneID:1176466;gbkey=Gene;gene=pcp;gene_synonym=pcpY,slyB;locus_tag=YPO3646
NC_003143.1	RefSeq	CDS	4066300	4066767	.	-	0	ID=cds3355;Name=YP_002348531.1;Parent=gene3527;Dbxref=InterPro:IPR008816,UniProtKB%2FTrEMBL:Q0WB07,Genbank:YP_002348531.1,GeneID:1176466;gbkey=CDS;gene=pcp;product=outer membrane lipoprotein;protein_id=YP_002348531.1;transl_table=11
NC_003143.1	RefSeq	region	4066714	4066746	.	-	.	ID=id2629;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site.;Dbxref=GeneID:1176466;gbkey=misc_feature;gene=pcp
NC_003143.1	RefSeq	gene	4067228	4068055	.	+	.	ID=gene3528;Name=YPO3647;Dbxref=GeneID:1176467;gbkey=Gene;locus_tag=YPO3647
NC_003143.1	RefSeq	CDS	4067228	4068055	.	+	0	ID=cds3356;Name=YP_002348532.1;Parent=gene3528;Dbxref=InterPro:IPR001279,UniProtKB%2FTrEMBL:Q7CL57,Genbank:YP_002348532.1,GeneID:1176467;gbkey=CDS;product=hypothetical protein;protein_id=YP_002348532.1;transl_table=11
NC_003143.1	RefSeq	gene	4068120	4069010	.	+	.	ID=gene3529;Name=YPO3648;Dbxref=GeneID:1176468;gbkey=Gene;locus_tag=YPO3648
NC_003143.1	RefSeq	CDS	4068120	4069010	.	+	0	ID=cds3357;Name=YP_002348533.1;Parent=gene3529;Dbxref=InterPro:IPR002204,InterPro:IPR006115,InterPro:IPR008927,UniProtKB%2FTrEMBL:Q7CL58,Genbank:YP_002348533.1,GeneID:1176468;gbkey=CDS;product=2-hydroxy-3-oxopropionate reductase;protein_id=YP_002348533.1;transl_table=11
NC_003143.1	RefSeq	gene	4069188	4069583	.	+	.	ID=gene3530;Name=YPO3649;Dbxref=GeneID:1176469;gbkey=Gene;locus_tag=YPO3649
NC_003143.1	RefSeq	CDS	4069188	4069583	.	+	0	ID=cds3358;Name=YP_002348534.1;Parent=gene3530;Dbxref=InterPro:IPR003779,UniProtKB%2FTrEMBL:Q0WB04,Genbank:YP_002348534.1,GeneID:1176469;gbkey=CDS;product=gamma carboxymuconolactone decarboxylase;protein_id=YP_002348534.1;transl_table=11
NC_003143.1	RefSeq	region	4069473	4069541	.	+	.	ID=id2630;Note=1 probable transmembrane helix predicted;Dbxref=GeneID:1176469;gbkey=misc_feature
NC_003143.1	RefSeq	gene	4069737	4071101	.	+	.	ID=gene3531;Name=YPO3650;Dbxref=GeneID:1176470;gbkey=Gene;locus_tag=YPO3650
NC_003143.1	RefSeq	CDS	4069737	4071101	.	+	0	ID=cds3359;Name=YP_002348535.1;Parent=gene3531;Dbxref=InterPro:IPR005829,InterPro:IPR007114,InterPro:IPR011701,UniProtKB%2FTrEMBL:Q7CL59,Genbank:YP_002348535.1,GeneID:1176470;gbkey=CDS;product=metabolite transport protein;protein_id=YP_002348535.1;transl_table=11
NC_003143.1	RefSeq	region	4070145	4070222	.	+	.	ID=id2631;Note=PS00217 Sugar transport proteins signature 2.;Dbxref=GeneID:1176470;gbkey=misc_feature
NC_003143.1	RefSeq	gene	4071191	4071853	.	+	.	ID=gene3532;Name=YPO3651;Dbxref=GeneID:1176471;gbkey=Gene;locus_tag=YPO3651
NC_003143.1	RefSeq	CDS	4071191	4071853	.	+	0	ID=cds3360;Name=YP_002348536.1;Parent=gene3532;Dbxref=InterPro:IPR000524,InterPro:IPR011711,UniProtKB%2FTrEMBL:Q0WB02,Genbank:YP_002348536.1,GeneID:1176471;gbkey=CDS;product=GntR family transcriptional regulator;protein_id=YP_002348536.1;transl_table=11
NC_003143.1	RefSeq	region	4071293	4071367	.	+	.	ID=id2632;Note=PS00043 Bacterial regulatory proteins%2C gntR family signature.;Dbxref=GeneID:1176471;gbkey=misc_feature
NC_003143.1	RefSeq	region	4071296	4071361	.	+	.	ID=id2633;Note=Predicted helix-turn-helix motif with score 1111 %28%2B2.97 SD%29 at aa 36-57%2C sequence LIERELCETLGVSRTSIREALR;Dbxref=GeneID:1176471;gbkey=misc_feature
NC_003143.1	RefSeq	gene	4071919	4072395	.	+	.	ID=gene3533;Name=YPO3652;Dbxref=GeneID:1176472;gbkey=Gene;locus_tag=YPO3652
NC_003143.1	RefSeq	CDS	4071919	4072395	.	+	0	ID=cds3361;Name=YP_002348537.1;Parent=gene3533;Note=no significant database hits;Dbxref=UniProtKB%2FTrEMBL:Q7CL60,Genbank:YP_002348537.1,GeneID:1176472;gbkey=CDS;product=hypothetical protein;protein_id=YP_002348537.1;transl_table=11
NC_003143.1	RefSeq	gene	4072626	4072745	.	+	.	ID=gene3534;Name=YPO3653;Dbxref=GeneID:1176473;gbkey=Gene;locus_tag=YPO3653
NC_003143.1	RefSeq	CDS	4072626	4072745	.	+	0	ID=cds3362;Name=YP_002348538.1;Parent=gene3534;Dbxref=UniProtKB%2FTrEMBL:Q74PL1,Genbank:YP_002348538.1,GeneID:1176473;gbkey=CDS;product=colicin immunity protein;protein_id=YP_002348538.1;transl_table=11
NC_003143.1	RefSeq	gene	4073149	4073445	.	-	.	ID=gene3535;Name=fis;Dbxref=GeneID:1176474;gbkey=Gene;gene=fis;locus_tag=YPO3654
NC_003143.1	RefSeq	CDS	4073149	4073445	.	-	0	ID=cds3363;Name=YP_002348539.1;Parent=gene3535;Note=Stimulates excision of phage lambda%3B affects Mu development%3B acts as an activator of rRNA and iRNA transcription;Dbxref=InterPro:IPR002197,InterPro:IPR005412,InterPro:IPR008931,InterPro:IPR009057,UniProtKB%2FTrEMBL:Q0WAZ9,Genbank:YP_002348539.1,GeneID:1176474;gbkey=CDS;gene=fis;product=Fis family transcriptional regulator;protein_id=YP_002348539.1;transl_table=11
NC_003143.1	RefSeq	region	4073167	4073232	.	-	.	ID=id2634;Note=Predicted helix-turn-helix motif with score 1824 %28%2B5.40 SD%29 at aa 72-93%2C sequence GNQTRAALMMGINRGTLRKKLK;Dbxref=GeneID:1176474;gbkey=misc_feature;gene=fis
NC_003143.1	RefSeq	gene	4073470	4074435	.	-	.	ID=gene3536;Name=YPO3655;Dbxref=GeneID:1176475;gbkey=Gene;locus_tag=YPO3655
NC_003143.1	RefSeq	CDS	4073470	4074435	.	-	0	ID=cds3364;Name=YP_002348540.1;Parent=gene3536;Dbxref=InterPro:IPR001269,InterPro:IPR004652,UniProtKB%2FTrEMBL:Q0WAZ8,Genbank:YP_002348540.1,GeneID:1176475;gbkey=CDS;product=tRNA-dihydrouridine synthase B;protein_id=YP_002348540.1;transl_table=11
NC_003143.1	RefSeq	region	4074100	4074156	.	-	.	ID=id2635;Note=PS01136 Uncharacterized protein family UPF0034 signature.;Dbxref=GeneID:1176475;gbkey=misc_feature
NC_003143.1	RefSeq	gene	4075024	4075905	.	-	.	ID=gene3537;Name=prmA;Dbxref=GeneID:1176476;gbkey=Gene;gene=prmA;locus_tag=YPO3656
NC_003143.1	RefSeq	CDS	4075024	4075905	.	-	0	ID=cds3365;Name=YP_002348541.1;Parent=gene3537;Note=methylates ribosomal protein L11 at multiple amino acid positions%3B mutations of these genes in Escherichia coli or Thermus thermophilus has no apparent phenotype;Dbxref=InterPro:IPR004498,InterPro:IPR010456,UniProtKB%2FTrEMBL:Q0WAZ7,Genbank:YP_002348541.1,GeneID:1176476;gbkey=CDS;gene=prmA;product=ribosomal protein L11 methyltransferase;protein_id=YP_002348541.1;transl_table=11
NC_003143.1	RefSeq	region	4075153	4075170	.	-	.	ID=id2636;Note=PS00343 Gram-positive cocci surface proteins %27anchoring%27 hexapeptide.;Dbxref=GeneID:1176476;gbkey=misc_feature;gene=prmA
NC_003143.1	RefSeq	gene	4075981	4077435	.	-	.	ID=gene3538;Name=panF;Dbxref=GeneID:1176477;gbkey=Gene;gene=panF;locus_tag=YPO3657
NC_003143.1	RefSeq	CDS	4075981	4077435	.	-	0	ID=cds3366;Name=YP_002348542.1;Parent=gene3538;Note=mediates high affinitiy panthothenate transport which is stimulated by the presence of sodium ions%3B member of SSS family of sodium%2Fsolute symporters%3B the imported panthothenate is phosphorylated by panthothenate kinase;Dbxref=InterPro:IPR001734,InterPro:IPR011849,UniProtKB%2FTrEMBL:Q0WAZ6,Genbank:YP_002348542.1,GeneID:1176477;gbkey=CDS;gene=panF;product=sodium%2Fpanthothenate symporter;protein_id=YP_002348542.1;transl_table=11
NC_003143.1	RefSeq	region	4076134	4076196	.	-	.	ID=id2637;Note=PS00457 Sodium:solute symporter family signature 2.;Dbxref=GeneID:1176477;gbkey=misc_feature;gene=panF
NC_003143.1	RefSeq	region	4076896	4076973	.	-	.	ID=id2638;Note=PS00456 Sodium:solute symporter family signature 1.;Dbxref=GeneID:1176477;gbkey=misc_feature;gene=panF
NC_003143.1	RefSeq	gene	4077425	4077667	.	-	.	ID=gene3539;Name=yhdT;Dbxref=GeneID:1176478;gbkey=Gene;gene=yhdT;locus_tag=YPO3657a
NC_003143.1	RefSeq	CDS	4077425	4077667	.	-	0	ID=cds3367;Name=YP_002348543.1;Parent=gene3539;Dbxref=InterPro:IPR010398,UniProtKB%2FTrEMBL:Q7CL61,Genbank:YP_002348543.1,GeneID:1176478;gbkey=CDS;gene=yhdT;product=hypothetical protein;protein_id=YP_002348543.1;transl_table=11
NC_003143.1	RefSeq	gene	4079025	4080374	.	-	.	ID=gene3540;Name=accC;Dbxref=GeneID:1176479;gbkey=Gene;gene=accC;gene_synonym=fabG;locus_tag=YPO3658
NC_003143.1	RefSeq	CDS	4079025	4080374	.	-	0	ID=cds3368;Name=YP_002348544.1;Parent=gene3540;Note=an AccC homodimer forms the biotin carboxylase subunit of the acetyl CoA carboxylase%2C an enzyme that catalyzes the formation of malonyl-CoA%2C which in turn controls the rate of fatty acid metabolism;Dbxref=InterPro:IPR004549,InterPro:IPR005479,InterPro:IPR005481,InterPro:IPR005482,InterPro:IPR011054,InterPro:IPR011761,InterPro:IPR011764,InterPro:IPR013816,InterPro:IPR013817,UniProtKB%2FTrEMBL:Q7CL62,Genbank:YP_002348544.1,GeneID:1176479;gbkey=CDS;gene=accC;product=acetyl-CoA carboxylase biotin carboxylase subunit;protein_id=YP_002348544.1;transl_table=11
NC_003143.1	RefSeq	region	4079496	4079519	.	-	.	ID=id2639;Note=PS00867 Carbamoyl-phosphate synthase subdomain signature 2.;Dbxref=GeneID:1176479;gbkey=misc_feature;gene=accC
NC_003143.1	RefSeq	region	4079871	4079915	.	-	.	ID=id2640;Note=PS00866 Carbamoyl-phosphate synthase subdomain signature 1.;Dbxref=GeneID:1176479;gbkey=misc_feature;gene=accC
NC_003143.1	RefSeq	gene	4080386	4080850	.	-	.	ID=gene3541;Name=accB;Dbxref=GeneID:1176480;gbkey=Gene;gene=accB;gene_synonym=fabE;locus_tag=YPO3659
NC_003143.1	RefSeq	CDS	4080386	4080850	.	-	0	ID=cds3369;Name=YP_002348545.1;Parent=gene3541;Note=composes the biotin carboxyl carrier protein subunit of the acetyl-CoA carboxylase complex%2C the enzyme that catalyzes the carboxylation of acetyl-CoA to malonyl-CoA%2C which in turn controls the rate of fatty acid metabolism;Dbxref=InterPro:IPR000089,InterPro:IPR001249,InterPro:IPR001882,InterPro:IPR011053,UniProtKB%2FTrEMBL:Q0WAZ3,Genbank:YP_002348545.1,GeneID:1176480;gbkey=CDS;gene=accB;product=acetyl-CoA carboxylase biotin carboxyl carrier protein subunit;protein_id=YP_002348545.1;transl_table=11
NC_003143.1	RefSeq	region	4080470	4080523	.	-	.	ID=id2641;Note=PS00188 Biotin-requiring enzymes attachment site.;Dbxref=GeneID:1176480;gbkey=misc_feature;gene=accB
NC_003143.1	RefSeq	gene	4081008	4081460	.	-	.	ID=gene3542;Name=aroQ;Dbxref=GeneID:1176481;gbkey=Gene;gene=aroQ;locus_tag=YPO3660
NC_003143.1	RefSeq	CDS	4081008	4081460	.	-	0	ID=cds3370;Name=YP_002348546.1;Parent=gene3542;Note=catalyzes the formation of 3-dehydroshikimate from 3-dehydroquinate in chorismate biosynthesis;Dbxref=InterPro:IPR001874,UniProtKB%2FTrEMBL:Q0WAZ2,Genbank:YP_002348546.1,GeneID:1176481;gbkey=CDS;gene=aroQ;product=3-dehydroquinate dehydratase;protein_id=YP_002348546.1;transl_table=11
NC_003143.1	RefSeq	gene	4081723	4082343	.	-	.	ID=gene3543;Name=YPO3661;Dbxref=GeneID:1176482;gbkey=Gene;locus_tag=YPO3661
NC_003143.1	RefSeq	CDS	4081723	4082343	.	-	0	ID=cds3371;Name=YP_002348547.1;Parent=gene3543;Note=in Escherichia coli this inner membrane protein was found to anchor the periplasmic catalytic oxidoreductase YedY%3B sulfite oxidase activity not demonstrated%3B contains heme;Dbxref=InterPro:IPR013130,UniProtKB%2FTrEMBL:Q0WAZ1,Genbank:YP_002348547.1,GeneID:1176482;gbkey=CDS;product=sulfite oxidase subunit YedZ;protein_id=YP_002348547.1;transl_table=11
NC_003143.1	RefSeq	gene	4082343	4083443	.	-	.	ID=gene3544;Name=YPO3662;Dbxref=GeneID:1176483;gbkey=Gene;locus_tag=YPO3662
NC_003143.1	RefSeq	CDS	4082343	4083443	.	-	0	ID=cds3372;Name=YP_002348548.1;Parent=gene3544;Note=in Escherichia coli this periplasmic enzyme was found to encode the periplasmic catalytic subunit of an oxidoreductase%3B sulfite oxidase activity not demonstrated%3B requires inner membrane anchor protein YedZ;Dbxref=InterPro:IPR000572,InterPro:IPR006311,UniProtKB%2FTrEMBL:Q0WAZ0,Genbank:YP_002348548.1,GeneID:1176483;gbkey=CDS;product=sulfite oxidase subunit YedY;protein_id=YP_002348548.1;transl_table=11
NC_003143.1	RefSeq	gene	4083666	4084643	.	-	.	ID=gene3545;Name=yhdH;Dbxref=GeneID:1176484;gbkey=Gene;gene=yhdH;locus_tag=YPO3663
NC_003143.1	RefSeq	CDS	4083666	4084643	.	-	0	ID=cds3373;Name=YP_002348549.1;Parent=gene3545;Dbxref=InterPro:IPR002085,InterPro:IPR011032,InterPro:IPR013149,InterPro:IPR013154,UniProtKB%2FTrEMBL:Q7CL63,Genbank:YP_002348549.1,GeneID:1176484;gbkey=CDS;gene=yhdH;product=zinc-binding dehydrogenase;protein_id=YP_002348549.1;transl_table=11
NC_003143.1	RefSeq	gene	4085044	4086960	.	+	.	ID=gene3546;Name=yhdA;Dbxref=GeneID:1176485;gbkey=Gene;gene=yhdA;locus_tag=YPO3664
NC_003143.1	RefSeq	CDS	4085044	4086960	.	+	0	ID=cds3374;Name=YP_002348550.1;Parent=gene3546;Note=regulates the degradation of the small RNAs CsrB and CsrC%3B may function to targate RNase E to specific RNA molecules;Dbxref=InterPro:IPR000160,InterPro:IPR001633,UniProtKB%2FTrEMBL:Q7CL64,Genbank:YP_002348550.1,GeneID:1176485;gbkey=CDS;gene=yhdA;product=regulatory protein CsrD;protein_id=YP_002348550.1;transl_table=11
NC_003143.1	RefSeq	gene	4087297	4088340	.	+	.	ID=gene3547;Name=envB;Dbxref=GeneID:1176486;gbkey=Gene;gene=envB;gene_synonym=mreB,rodY;locus_tag=YPO3665
NC_003143.1	RefSeq	CDS	4087297	4088340	.	+	0	ID=cds3375;Name=YP_002348551.1;Parent=gene3547;Note=functions in MreBCD complex in some organisms;Dbxref=InterPro:IPR001023,InterPro:IPR004753,UniProtKB%2FTrEMBL:Q7CL65,Genbank:YP_002348551.1,GeneID:1176486;gbkey=CDS;gene=envB;product=rod shape-determining protein MreB;protein_id=YP_002348551.1;transl_table=11
NC_003143.1	RefSeq	gene	4088544	4089539	.	+	.	ID=gene3548;Name=mreC;Dbxref=GeneID:1176487;gbkey=Gene;gene=mreC;locus_tag=YPO3666
NC_003143.1	RefSeq	CDS	4088544	4089539	.	+	0	ID=cds3376;Name=YP_002348552.1;Parent=gene3548;Note=in some organisms this protein is a transmembrane protein while in others it is periplasmic%3B involved in some organisms with other components of the MreBCD complex and with penicillin binding proteins in the periplasm or cell wall;Dbxref=InterPro:IPR005223,InterPro:IPR007221,UniProtKB%2FTrEMBL:Q7CL66,Genbank:YP_002348552.1,GeneID:1176487;gbkey=CDS;gene=mreC;product=rod shape-determining protein MreC;protein_id=YP_002348552.1;transl_table=11
NC_003143.1	RefSeq	region	4088580	4088648	.	+	.	ID=id2642;Note=1 probable transmembrane helix predicted;Dbxref=GeneID:1176487;gbkey=misc_feature;gene=mreC
NC_003143.1	RefSeq	gene	4089536	4090024	.	+	.	ID=gene3549;Name=mreD;Dbxref=GeneID:1176488;gbkey=Gene;gene=mreD;locus_tag=YPO3667
NC_003143.1	RefSeq	CDS	4089536	4090024	.	+	0	ID=cds3377;Name=YP_002348553.1;Parent=gene3549;Note=part of cell wall structural complex MreBCD%3B transmembrane component;Dbxref=InterPro:IPR007227,UniProtKB%2FTrEMBL:Q7CL67,Genbank:YP_002348553.1,GeneID:1176488;gbkey=CDS;gene=mreD;product=rod shape-determining protein MreD;protein_id=YP_002348553.1;transl_table=11
NC_003143.1	RefSeq	gene	4090038	4090631	.	+	.	ID=gene3550;Name=maf;Dbxref=GeneID:1176489;gbkey=Gene;gene=maf;locus_tag=YPO3668
NC_003143.1	RefSeq	CDS	4090038	4090631	.	+	0	ID=cds3378;Name=YP_002348554.1;Parent=gene3550;Note=Maf%3B overexpression in Bacillus subtilis inhibits septation in the dividing cell;Dbxref=InterPro:IPR003697,UniProtKB%2FTrEMBL:Q0WAY4,Genbank:YP_002348554.1,GeneID:1176489;gbkey=CDS;gene=maf;product=Maf-like protein;protein_id=YP_002348554.1;transl_table=11
NC_003143.1	RefSeq	gene	4090621	4092090	.	+	.	ID=gene3551;Name=cafA;Dbxref=GeneID:1176490;gbkey=Gene;gene=cafA;gene_synonym=rng;locus_tag=YPO3669
NC_003143.1	RefSeq	CDS	4090621	4092090	.	+	0	ID=cds3379;Name=YP_002348555.1;Parent=gene3551;Note=involved in the processing of the 5%27end of 16S rRNA;Dbxref=InterPro:IPR003029,InterPro:IPR004659,InterPro:IPR008994,InterPro:IPR012340,UniProtKB%2FTrEMBL:Q7CL68,Genbank:YP_002348555.1,GeneID:1176490;gbkey=CDS;gene=cafA;product=ribonuclease G;protein_id=YP_002348555.1;transl_table=11
NC_003143.1	RefSeq	gene	4092184	4096107	.	+	.	ID=gene3552;Name=YPO3670;Dbxref=GeneID:1176491;gbkey=Gene;locus_tag=YPO3670
NC_003143.1	RefSeq	CDS	4092184	4096107	.	+	0	ID=cds3380;Name=YP_002348556.1;Parent=gene3552;Dbxref=InterPro:IPR011836,UniProtKB%2FTrEMBL:Q74PM2,Genbank:YP_002348556.1,GeneID:1176491;gbkey=CDS;product=hypothetical protein;protein_id=YP_002348556.1;transl_table=11
NC_003143.1	RefSeq	gene	4096104	4096973	.	+	.	ID=gene3553;Name=YPO3671;Dbxref=GeneID:1176492;gbkey=Gene;locus_tag=YPO3671
NC_003143.1	RefSeq	CDS	4096104	4096973	.	+	0	ID=cds3381;Name=YP_002348557.1;Parent=gene3553;Dbxref=InterPro:IPR001110,InterPro:IPR003010,UniProtKB%2FTrEMBL:Q7CL69,Genbank:YP_002348557.1,GeneID:1176492;gbkey=CDS;product=carbon-nitrogen hydrolase;protein_id=YP_002348557.1;transl_table=11
NC_003143.1	RefSeq	region	4096560	4096622	.	+	.	ID=id2643;Note=PS01227 Uncharacterized protein family UPF0012 signature.;Dbxref=GeneID:1176492;gbkey=misc_feature
NC_003143.1	RefSeq	gene	4096985	4098430	.	+	.	ID=gene3554;Name=tldD;Dbxref=GeneID:1176493;gbkey=Gene;gene=tldD;locus_tag=YPO3672
NC_003143.1	RefSeq	CDS	4096985	4098430	.	+	0	ID=cds3382;Name=YP_002348558.1;Parent=gene3554;Note=responsible for the proteolytic maturation of the E. coli pMccB17 plasmid-encoded microcin B17%2C an exported protein that targets the essential topoisomerase II DNA gyrase%3B degrades the E. coli plasmid F-encoded CcdA;Dbxref=InterPro:IPR002510,UniProtKB%2FTrEMBL:Q7CL70,Genbank:YP_002348558.1,GeneID:1176493;gbkey=CDS;gene=tldD;product=protease TldD;protein_id=YP_002348558.1;transl_table=11
NC_003143.1	RefSeq	gene	4098633	4101491	.	-	.	ID=gene3555;Name=YPO3673;Dbxref=GeneID:1176494;gbkey=Gene;locus_tag=YPO3673
NC_003143.1	RefSeq	CDS	4098633	4101491	.	-	0	ID=cds3383;Name=YP_002348559.1;Parent=gene3555;Dbxref=InterPro:IPR000387,InterPro:IPR002345,InterPro:IPR006530,UniProtKB%2FTrEMBL:Q7CL71,Genbank:YP_002348559.1,GeneID:1176494;gbkey=CDS;product=insecticidal toxin;protein_id=YP_002348559.1;transl_table=11
NC_003143.1	RefSeq	region	4098879	4098917	.	-	.	ID=id2644;Note=PS00383 Tyrosine specific protein phosphatases active site.;Dbxref=GeneID:1176494;gbkey=misc_feature
NC_003143.1	RefSeq	region	4100730	4100768	.	-	.	ID=id2645;Note=PS00213 Lipocalin signature.;Dbxref=GeneID:1176494;gbkey=misc_feature
NC_003143.1	RefSeq	ribosome_entry_site	4101499	4101504	.	-	.	ID=id2646;gbkey=RBS
NC_003143.1	RefSeq	gene	4101516	4104551	.	-	.	ID=gene3556;Name=YPO3674;Dbxref=GeneID:1176495;gbkey=Gene;locus_tag=YPO3674
NC_003143.1	RefSeq	CDS	4101516	4104551	.	-	0	ID=cds3384;Name=YP_002348560.1;Parent=gene3556;Dbxref=InterPro:IPR000340,InterPro:IPR000387,InterPro:IPR002345,InterPro:IPR006530,UniProtKB%2FTrEMBL:Q0WAX8,Genbank:YP_002348560.1,GeneID:1176495;gbkey=CDS;product=insecticidal toxin;protein_id=YP_002348560.1;transl_table=11
NC_003143.1	RefSeq	region	4101753	4101791	.	-	.	ID=id2647;Note=PS00383 Tyrosine specific protein phosphatases active site.;Dbxref=GeneID:1176495;gbkey=misc_feature
NC_003143.1	RefSeq	region	4103586	4103624	.	-	.	ID=id2648;Note=PS00213 Lipocalin signature.;Dbxref=GeneID:1176495;gbkey=misc_feature
NC_003143.1	RefSeq	gene	4104548	4104907	.	-	.	ID=gene3557;Name=YPO3675;Dbxref=GeneID:1176496;gbkey=Gene;locus_tag=YPO3675
NC_003143.1	RefSeq	CDS	4104548	4104907	.	-	0	ID=cds3385;Name=YP_002348561.1;Parent=gene3557;Note=no significant database matches;Dbxref=UniProtKB%2FTrEMBL:Q0WAX7,Genbank:YP_002348561.1,GeneID:1176496;gbkey=CDS;product=hypothetical protein;protein_id=YP_002348561.1;transl_table=11
NC_003143.1	RefSeq	gene	4104904	4105305	.	-	.	ID=gene3558;Name=YPO3676;Dbxref=GeneID:1176497;gbkey=Gene;locus_tag=YPO3676
NC_003143.1	RefSeq	CDS	4104904	4105305	.	-	0	ID=cds3386;Name=YP_002348562.1;Parent=gene3558;Dbxref=InterPro:IPR009045,UniProtKB%2FTrEMBL:Q0WAX6,Genbank:YP_002348562.1,GeneID:1176497;gbkey=CDS;product=hypothetical protein;protein_id=YP_002348562.1;transl_table=11
NC_003143.1	RefSeq	gene	4105318	4105620	.	-	.	ID=gene3559;Name=YPO3677;Dbxref=GeneID:1176498;gbkey=Gene;locus_tag=YPO3677
NC_003143.1	RefSeq	CDS	4105318	4105620	.	-	0	ID=cds3387;Name=YP_002348563.1;Parent=gene3559;Dbxref=UniProtKB%2FTrEMBL:Q7CL72,Genbank:YP_002348563.1,GeneID:1176498;gbkey=CDS;product=hypothetical protein;protein_id=YP_002348563.1;transl_table=11
NC_003143.1	RefSeq	gene	4105754	4110244	.	-	.	ID=gene3560;Name=tcaC;Dbxref=GeneID:1176499;gbkey=Gene;gene=tcaC;locus_tag=YPO3678
NC_003143.1	RefSeq	CDS	4105754	4110244	.	-	0	ID=cds3388;Name=YP_002348564.1;Parent=gene3560;Dbxref=InterPro:IPR000408,InterPro:IPR003284,InterPro:IPR011060,UniProtKB%2FTrEMBL:Q74PN2,Genbank:YP_002348564.1,GeneID:1176499;gbkey=CDS;gene=tcaC;product=insecticidal toxin complex;protein_id=YP_002348564.1;transl_table=11
NC_003143.1	RefSeq	region	4108499	4108531	.	-	.	ID=id2649;Note=PS00626 Regulator of chromosome condensation %28RCC1%29 signature 2.;Dbxref=GeneID:1176499;gbkey=misc_feature;gene=tcaC
NC_003143.1	RefSeq	region	4109570	4109635	.	-	.	ID=id2650;Note=Predicted helix-turn-helix motif with score 976 %28%2B2.51 SD%29 at aa 224-245%2C sequence GYQYQAEDEQGIDEPSIYKAEK;Dbxref=GeneID:1176499;gbkey=misc_feature;gene=tcaC
NC_003143.1	RefSeq	gene	4110301	4113893	.	-	.	ID=gene3561;Name=tcaB;Dbxref=GeneID:1176500;gbkey=Gene;gene=tcaB;locus_tag=YPO3679;pseudo=true
NC_003143.1	RefSeq	region	4111426	4111473	.	-	.	ID=id2651;Note=PS00012 Phosphopantetheine attachment site.;Dbxref=GeneID:1176500;gbkey=misc_feature;gene=tcaB
NC_003143.1	RefSeq	gene	4113934	4116435	.	-	.	ID=gene3562;Name=YPO3681;Dbxref=GeneID:1176501;gbkey=Gene;locus_tag=YPO3681
NC_003143.1	RefSeq	CDS	4113934	4116435	.	-	0	ID=cds3389;Name=YP_002348565.1;Parent=gene3562;Dbxref=InterPro:IPR011989,UniProtKB%2FTrEMBL:Q0WAX3,Genbank:YP_002348565.1,GeneID:1176501;gbkey=CDS;product=insecticial toxin;protein_id=YP_002348565.1;transl_table=11
NC_003143.1	RefSeq	region	4114000	4114065	.	-	.	ID=id2652;Note=Predicted helix-turn-helix motif with score 1195 %28%2B3.26 SD%29 at aa 791-812%2C sequence KNHIYIAEKLKIHPGTIIKIKN;Dbxref=GeneID:1176501;gbkey=misc_feature
NC_003143.1	RefSeq	region	4115347	4115370	.	-	.	ID=id2653;Note=PS00017 ATP%2FGTP-binding site motif A %28P-loop%29.;Dbxref=GeneID:1176501;gbkey=misc_feature
NC_003143.1	RefSeq	ribosome_entry_site	4116442	4116445	.	-	.	ID=id2654;gbkey=RBS
NC_003143.1	RefSeq	gene	4116671	4117537	.	-	.	ID=gene3563;Name=YPO3682;Dbxref=GeneID:1176502;gbkey=Gene;locus_tag=YPO3682
NC_003143.1	RefSeq	CDS	4116671	4117537	.	-	0	ID=cds3390;Name=YP_002348566.1;Parent=gene3563;Dbxref=InterPro:IPR000847,InterPro:IPR011991,UniProtKB%2FTrEMBL:Q0WAX2,Genbank:YP_002348566.1,GeneID:1176502;gbkey=CDS;product=LysR family transcriptional regulator;protein_id=YP_002348566.1;transl_table=11
NC_003143.1	RefSeq	region	4117394	4117486	.	-	.	ID=id2655;Note=PS00044 Bacterial regulatory proteins%2C lysR family signature.;Dbxref=GeneID:1176502;gbkey=misc_feature
NC_003143.1	RefSeq	gene	4117798	4118709	.	-	.	ID=gene3564;Name=YPO3683;Dbxref=GeneID:1176503;gbkey=Gene;locus_tag=YPO3683
NC_003143.1	RefSeq	CDS	4117798	4118709	.	-	0	ID=cds3391;Name=YP_002348567.1;Parent=gene3564;Dbxref=InterPro:IPR000847,InterPro:IPR005119,InterPro:IPR011991,UniProtKB%2FTrEMBL:Q7CL73,Genbank:YP_002348567.1,GeneID:1176503;gbkey=CDS;product=DNA-binding transcriptional regulator;protein_id=YP_002348567.1;transl_table=11
NC_003143.1	RefSeq	region	4118596	4118661	.	-	.	ID=id2656;Note=Predicted helix-turn-helix motif with score 1251 %28%2B3.45 SD%29 at aa 17-38%2C sequence GSFTAAARRLENSVSSISQTVS;Dbxref=GeneID:1176503;gbkey=misc_feature
NC_003143.1	RefSeq	gene	4119012	4119215	.	+	.	ID=gene3565;Name=YPO3684;Dbxref=GeneID:1176504;gbkey=Gene;locus_tag=YPO3684
NC_003143.1	RefSeq	CDS	4119012	4119215	.	+	0	ID=cds3392;Name=YP_002348568.1;Parent=gene3565;Note=membrane protein AaeX%3B the gene is a member of the aaeXAB operon;Dbxref=InterPro:IPR012451,UniProtKB%2FTrEMBL:Q0WAX0,Genbank:YP_002348568.1,GeneID:1176504;gbkey=CDS;product=hypothetical protein;protein_id=YP_002348568.1;transl_table=11
NC_003143.1	RefSeq	gene	4119223	4120158	.	+	.	ID=gene3566;Name=yhcQ;Dbxref=GeneID:1176505;gbkey=Gene;gene=yhcQ;locus_tag=YPO3685
NC_003143.1	RefSeq	CDS	4119223	4120158	.	+	0	ID=cds3393;Name=YP_002348569.1;Parent=gene3566;Note=with AaeB forms an efflux pump whose substrates are p-hydroxybenzoic acid%2C 6-hydroxy-2-naphthoic and 2-hydroxycinnamate;Dbxref=InterPro:IPR006143,InterPro:IPR011053,UniProtKB%2FTrEMBL:Q0WAW9,Genbank:YP_002348569.1,GeneID:1176505;gbkey=CDS;gene=yhcQ;product=p-hydroxybenzoic acid efflux subunit AaeA;protein_id=YP_002348569.1;transl_table=11
NC_003143.1	RefSeq	gene	4120160	4122115	.	+	.	ID=gene3567;Name=yhcP;Dbxref=GeneID:1176506;gbkey=Gene;gene=yhcP;locus_tag=YPO3686
NC_003143.1	RefSeq	CDS	4120160	4122115	.	+	0	ID=cds3394;Name=YP_002348570.1;Parent=gene3567;Note=with AaeA forms an efflux pump whose substrates are p-hydroxybenzoic acid 6-hydroxy-2-naphthoic and 2-hydroxycinnamate;Dbxref=InterPro:IPR006726,UniProtKB%2FTrEMBL:Q0WAW8,Genbank:YP_002348570.1,GeneID:1176506;gbkey=CDS;gene=yhcP;product=p-hydroxybenzoic acid efflux subunit AaeB;protein_id=YP_002348570.1;transl_table=11
NC_003143.1	RefSeq	gene	4122382	4123850	.	+	.	ID=gene3568;Name=YPO3687;Dbxref=GeneID:1176507;gbkey=Gene;locus_tag=YPO3687;pseudo=true
NC_003143.1	RefSeq	region	4123096	4123119	.	+	.	ID=id2657;Note=PS00017 ATP%2FGTP-binding site motif A %28P-loop%29.;Dbxref=GeneID:1176507;gbkey=misc_feature
NC_003143.1	RefSeq	region	4123159	4123182	.	+	.	ID=id2658;Note=PS00687 Aldehyde dehydrogenases glutamic acid active site.;Dbxref=GeneID:1176507;gbkey=misc_feature
NC_003143.1	RefSeq	region	4123243	4123278	.	+	.	ID=id2659;Note=PS00070 Aldehyde dehydrogenases cysteine active site.;Dbxref=GeneID:1176507;gbkey=misc_feature
NC_003143.1	RefSeq	gene	4124060	4124518	.	+	.	ID=gene3569;Name=YPO3689;Dbxref=GeneID:1176508;gbkey=Gene;locus_tag=YPO3689
NC_003143.1	RefSeq	CDS	4124060	4124518	.	+	0	ID=cds3395;Name=YP_002348571.1;Parent=gene3569;Dbxref=InterPro:IPR000026,InterPro:IPR001887,UniProtKB%2FTrEMBL:Q0WAW7,Genbank:YP_002348571.1,GeneID:1176508;gbkey=CDS;product=ribonuclease;protein_id=YP_002348571.1;transl_table=11
NC_003143.1	RefSeq	gene	4124523	4124804	.	+	.	ID=gene3570;Name=YPO3690;Dbxref=GeneID:1176509;gbkey=Gene;locus_tag=YPO3690
NC_003143.1	RefSeq	CDS	4124523	4124804	.	+	0	ID=cds3396;Name=YP_002348572.1;Parent=gene3570;Dbxref=InterPro:IPR000468,UniProtKB%2FTrEMBL:Q7CL77,Genbank:YP_002348572.1,GeneID:1176509;gbkey=CDS;product=ribonuclease inhibitor;protein_id=YP_002348572.1;transl_table=11
NC_003143.1	RefSeq	gene	4124916	4125464	.	-	.	ID=gene3571;Name=YPO3691;Dbxref=GeneID:1176510;gbkey=Gene;locus_tag=YPO3691
NC_003143.1	RefSeq	CDS	4124916	4125464	.	-	0	ID=cds3397;Name=YP_002348573.1;Parent=gene3571;Dbxref=InterPro:IPR006839,InterPro:IPR010921,UniProtKB%2FTrEMBL:Q0WAW5,Genbank:YP_002348573.1,GeneID:1176510;gbkey=CDS;product=hypothetical protein;protein_id=YP_002348573.1;transl_table=11
NC_003143.1	RefSeq	gene	4125645	4126985	.	+	.	ID=gene3572;Name=pmbA;Dbxref=GeneID:1176511;gbkey=Gene;gene=pmbA;gene_synonym=tldE;locus_tag=YPO3692
NC_003143.1	RefSeq	CDS	4125645	4126985	.	+	0	ID=cds3398;Name=YP_002348574.1;Parent=gene3572;Note=protease involved in proteolytic processing of the antibiotic Microcin B17 and in sensitivity to the DNA gyrase inhibitor LetD;Dbxref=InterPro:IPR002510,UniProtKB%2FTrEMBL:Q7CL78,Genbank:YP_002348574.1,GeneID:1176511;gbkey=CDS;gene=pmbA;product=peptidase PmbA;protein_id=YP_002348574.1;transl_table=11
NC_003143.1	RefSeq	gene	4127240	4127878	.	+	.	ID=gene3573;Name=YPO3693;Dbxref=GeneID:1176512;gbkey=Gene;locus_tag=YPO3693
NC_003143.1	RefSeq	CDS	4127240	4127878	.	+	0	ID=cds3399;Name=YP_002348575.1;Parent=gene3573;Dbxref=UniProtKB%2FTrEMBL:Q0WAW3,Genbank:YP_002348575.1,GeneID:1176512;gbkey=CDS;product=hypothetical protein;protein_id=YP_002348575.1;transl_table=11
NC_003143.1	RefSeq	gene	4128086	4128472	.	+	.	ID=gene3574;Name=YPO3694;Dbxref=GeneID:1176513;gbkey=Gene;locus_tag=YPO3694
NC_003143.1	RefSeq	CDS	4128086	4128472	.	+	0	ID=cds3400;Name=YP_002348576.1;Parent=gene3574;Dbxref=InterPro:IPR009155,InterPro:IPR010980,UniProtKB%2FTrEMBL:Q0WAW2,Genbank:YP_002348576.1,GeneID:1176513;gbkey=CDS;product=cytochrome;protein_id=YP_002348576.1;transl_table=11
NC_003143.1	RefSeq	gene	4128696	4129106	.	-	.	ID=gene3575;Name=rnk;Dbxref=GeneID:1176514;gbkey=Gene;gene=rnk;locus_tag=YPO3695
NC_003143.1	RefSeq	CDS	4128696	4129106	.	-	0	ID=cds3401;Name=YP_002348577.1;Parent=gene3575;Note=Regulates the synthesis of nucleoside triphosphates for nucleic acid synthesis%2C CTP for lipid synthesis%2C and GTP for protein elongation;Dbxref=InterPro:IPR001437,InterPro:IPR012243,UniProtKB%2FTrEMBL:Q7CL79,Genbank:YP_002348577.1,GeneID:1176514;gbkey=CDS;gene=rnk;product=nucleoside diphosphate kinase regulator;protein_id=YP_002348577.1;transl_table=11
NC_003143.1	RefSeq	gene	4129459	4131126	.	-	.	ID=gene3576;Name=treC;Dbxref=GeneID:1176515;gbkey=Gene;gene=treC;locus_tag=YPO3696
NC_003143.1	RefSeq	CDS	4129459	4131126	.	-	0	ID=cds3402;Name=YP_002348578.1;Parent=gene3576;Dbxref=InterPro:IPR006047,InterPro:IPR006589,InterPro:IPR012769,InterPro:IPR013780,InterPro:IPR013781,UniProtKB%2FTrEMBL:Q7CL80,Genbank:YP_002348578.1,GeneID:1176515;gbkey=CDS;gene=treC;product=trehalose-6-phosphate hydrolase;protein_id=YP_002348578.1;transl_table=11
NC_003143.1	RefSeq	gene	4131221	4132636	.	-	.	ID=gene3577;Name=treB;Dbxref=GeneID:1176516;gbkey=Gene;gene=treB;locus_tag=YPO3697
NC_003143.1	RefSeq	CDS	4131221	4132636	.	-	0	ID=cds3403;Name=YP_002348579.1;Parent=gene3577;Note=phosphoenolpyruvate-dependent sugar phosphotransferase system%3B catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane%3B IIB is phosphorylated by IIA and then transfers the phosphoryl group to the sugar%3B IIC forms the translocation channel;Dbxref=InterPro:IPR001996,InterPro:IPR003352,InterPro:IPR011296,InterPro:IPR011535,InterPro:IPR013013,UniProtKB%2FTrEMBL:Q7CL81,Genbank:YP_002348579.1,GeneID:1176516;gbkey=CDS;gene=treB;product=PTS system trehalose%28maltose%29-specific transporter subunits IIBC;protein_id=YP_002348579.1;transl_table=11
NC_003143.1	RefSeq	region	4132523	4132576	.	-	.	ID=id2660;Note=PS01035 PTS EIIB domains cysteine phosphorylation site signature.;Dbxref=GeneID:1176516;gbkey=misc_feature;gene=treB
NC_003143.1	RefSeq	gene	4133047	4134000	.	-	.	ID=gene3578;Name=treR;Dbxref=GeneID:1176517;gbkey=Gene;gene=treR;locus_tag=YPO3698
NC_003143.1	RefSeq	CDS	4133047	4134000	.	-	0	ID=cds3404;Name=YP_002348580.1;Parent=gene3578;Note=regulates genes involved in trehalose metabolism%3B binds the intermediate trehalose-6-phosphate%3B binds a dimer%3B regulates treBC operon;Dbxref=InterPro:IPR000843,InterPro:IPR001761,InterPro:IPR010982,InterPro:IPR012771,InterPro:IPR013318,UniProtKB%2FTrEMBL:Q7CL82,Genbank:YP_002348580.1,GeneID:1176517;gbkey=CDS;gene=treR;product=trehalose repressor;protein_id=YP_002348580.1;transl_table=11
NC_003143.1	RefSeq	region	4133923	4133988	.	-	.	ID=id2661;Note=Predicted helix-turn-helix motif with score 2348 %28%2B7.18 SD%29 at aa 5-26%2C sequence LTIKDIARMSGVGKSTVSRVLN;Dbxref=GeneID:1176517;gbkey=misc_feature;gene=treR
NC_003143.1	RefSeq	region	4133926	4133982	.	-	.	ID=id2662;Note=PS00356 Bacterial regulatory proteins%2C lacI family signature.;Dbxref=GeneID:1176517;gbkey=misc_feature;gene=treR
NC_003143.1	RefSeq	gene	4134234	4134710	.	-	.	ID=gene3579;Name=YPO3699;Dbxref=GeneID:1176518;gbkey=Gene;locus_tag=YPO3699
NC_003143.1	RefSeq	CDS	4134234	4134710	.	-	0	ID=cds3405;Name=YP_002348581.1;Parent=gene3579;Note=no significant database matches;Dbxref=UniProtKB%2FTrEMBL:Q7CL83,Genbank:YP_002348581.1,GeneID:1176518;gbkey=CDS;product=hypothetical protein;protein_id=YP_002348581.1;transl_table=11
NC_003143.1	RefSeq	repeat_region	4134760	4136713	.	-	.	ID=id2663;Note=insertion sequence:IS100;gbkey=repeat_region
NC_003143.1	RefSeq	repeat_region	4134760	4134787	.	+	.	ID=id2664;Note=IS100 inverted repeat;gbkey=repeat_region
NC_003143.1	RefSeq	gene	4134826	4135608	.	-	.	ID=gene3580;Name=YPO3700;Note=ypmt1.57c;Dbxref=GeneID:1176519;gbkey=Gene;locus_tag=YPO3700
NC_003143.1	RefSeq	CDS	4134826	4135608	.	-	0	ID=cds3406;Name=YP_002348582.1;Parent=gene3580;Dbxref=InterPro:IPR001270,InterPro:IPR002611,InterPro:IPR003593,UniProtKB%2FTrEMBL:Q7ARK4,Genbank:YP_002348582.1,GeneID:1176519;gbkey=CDS;product=transposase%2FIS protein;protein_id=YP_002348582.1;transl_table=11
NC_003143.1	RefSeq	region	4135258	4135281	.	-	.	ID=id2665;Note=PS00017 ATP%2FGTP-binding site motif A %28P-loop%29.;Dbxref=GeneID:1176519;gbkey=misc_feature
NC_003143.1	RefSeq	gene	4135605	4136627	.	-	.	ID=gene3581;Name=y1093;Dbxref=GeneID:1176520;gbkey=Gene;gene=y1093;gene_synonym=ypmt1;locus_tag=YPO3701
NC_003143.1	RefSeq	CDS	4135605	4136627	.	-	0	ID=cds3407;Name=YP_002348583.1;Parent=gene3581;Dbxref=InterPro:IPR001584,InterPro:IPR006120,InterPro:IPR009057,InterPro:IPR012287,InterPro:IPR012337,UniProtKB%2FTrEMBL:Q7ARN5,Genbank:YP_002348583.1,GeneID:1176520;gbkey=CDS;gene=y1093;product=transposase for insertion sequence IS100;protein_id=YP_002348583.1;transl_table=11
NC_003143.1	RefSeq	region	4136511	4136576	.	-	.	ID=id2666;Note=Predicted helix-turn-helix motif with score 2147 %28%2B6.50 SD%29 at aa 18-39%2C sequence MSSRAIARELGISRNTVKRYLQ;Dbxref=GeneID:1176520;gbkey=misc_feature;gene=y1093
NC_003143.1	RefSeq	region	4136686	4137909	.	+	.	ID=id2667;Note=Truncated IS1397-like insertion element: IS1661;gbkey=misc_feature
NC_003143.1	RefSeq	repeat_region	4136686	4136713	.	-	.	ID=id2668;Note=IS100 inverted repeat;gbkey=repeat_region
NC_003143.1	RefSeq	gene	4137082	4137867	.	+	.	ID=gene3582;Name=YPO3703;Dbxref=GeneID:1176522;gbkey=Gene;locus_tag=YPO3703
NC_003143.1	RefSeq	CDS	4137082	4137867	.	+	0	ID=cds3408;Name=YP_002348585.1;Parent=gene3582;Dbxref=InterPro:IPR001584,InterPro:IPR012337,UniProtKB%2FTrEMBL:Q7CKI6,Genbank:YP_002348585.1,GeneID:1176522;gbkey=CDS;product=transposase for insertion sequence IS1661;protein_id=YP_002348585.1;transl_table=11
NC_003143.1	RefSeq	repeat_region	4137876	4137909	.	-	.	ID=id2669;Note=Inverted repeat for IS1661 insertion element;gbkey=repeat_region
NC_003143.1	RefSeq	gene	4137910	4138983	.	-	.	ID=gene3583;Name=YPO3704;Dbxref=GeneID:1176523;gbkey=Gene;locus_tag=YPO3704;pseudo=true
NC_003143.1	RefSeq	region	4137910	4138983	.	-	.	ID=id2670;Note=This CDS is disrupted by the insertion of an IS166 element. It is lacking %7E%7E250 amino acids at its C-terminal region. This truncated CDS is similar to Escherichia coli O157:H7 Z0260 protein TR:AAG54529 %28EMBL:AE005198%29 %28616 aa%29 fasta scores: E%28%29: 0%2C 51.0%25 id in 357 aa%2C and to Vibrio cholerae hypothetical protein Vca0110 TR:Q9KN55 %28EMBL:AE004353%29 %28589 aa%29 fasta scores: E%28%29: 0%2C 45.7%25 id in 350 aa;Dbxref=GeneID:1176523;gbkey=misc_feature;pseudo=true
NC_003143.1	RefSeq	gene	4138983	4139423	.	-	.	ID=gene3584;Name=YPO3705;Dbxref=GeneID:1176524;gbkey=Gene;locus_tag=YPO3705
NC_003143.1	RefSeq	CDS	4138983	4139423	.	-	0	ID=cds3409;Name=YP_002348586.1;Parent=gene3584;Dbxref=InterPro:IPR010745,UniProtKB%2FTrEMBL:Q7CLD2,Genbank:YP_002348586.1,GeneID:1176524;gbkey=CDS;product=hypothetical protein;protein_id=YP_002348586.1;transl_table=11
NC_003143.1	RefSeq	gene	4139430	4140911	.	-	.	ID=gene3585;Name=YPO3706;Dbxref=GeneID:1176525;gbkey=Gene;locus_tag=YPO3706
NC_003143.1	RefSeq	CDS	4139430	4140911	.	-	0	ID=cds3410;Name=YP_002348587.1;Parent=gene3585;Dbxref=InterPro:IPR010269,UniProtKB%2FTrEMBL:Q7CLD3,Genbank:YP_002348587.1,GeneID:1176525;gbkey=CDS;product=hypothetical protein;protein_id=YP_002348587.1;transl_table=11
NC_003143.1	RefSeq	gene	4140979	4141476	.	-	.	ID=gene3586;Name=YPO3707;Dbxref=GeneID:1176526;gbkey=Gene;locus_tag=YPO3707
NC_003143.1	RefSeq	CDS	4140979	4141476	.	-	0	ID=cds3411;Name=YP_002348588.1;Parent=gene3586;Dbxref=InterPro:IPR008312,UniProtKB%2FTrEMBL:Q0WAV0,Genbank:YP_002348588.1,GeneID:1176526;gbkey=CDS;product=hypothetical protein;protein_id=YP_002348588.1;transl_table=11
NC_003143.1	RefSeq	gene	4142000	4142518	.	+	.	ID=gene3587;Name=YPO3708;Dbxref=GeneID:1176527;gbkey=Gene;locus_tag=YPO3708
NC_003143.1	RefSeq	CDS	4142000	4142518	.	+	0	ID=cds3412;Name=YP_002348589.1;Parent=gene3587;Dbxref=InterPro:IPR008514,UniProtKB%2FTrEMBL:Q7CLD4,Genbank:YP_002348589.1,GeneID:1176527;gbkey=CDS;product=hypothetical protein;protein_id=YP_002348589.1;transl_table=11
NC_003143.1	RefSeq	gene	4142670	4143008	.	-	.	ID=gene3588;Name=YPO3709;Dbxref=GeneID:1176528;gbkey=Gene;locus_tag=YPO3709
NC_003143.1	RefSeq	CDS	4142670	4143008	.	-	0	ID=cds3413;Name=YP_002348590.1;Parent=gene3588;Note=no significant database hits;Dbxref=UniProtKB%2FTrEMBL:Q0WAU8,Genbank:YP_002348590.1,GeneID:1176528;gbkey=CDS;product=hypothetical protein;protein_id=YP_002348590.1;transl_table=11
NC_003143.1	RefSeq	gene	4143419	4144348	.	-	.	ID=gene3589;Name=malM;Dbxref=GeneID:1176529;gbkey=Gene;gene=malM;gene_synonym=molA;locus_tag=YPO3710
NC_003143.1	RefSeq	CDS	4143419	4144348	.	-	0	ID=cds3414;Name=YP_002348591.1;Parent=gene3589;Dbxref=InterPro:IPR010794,UniProtKB%2FTrEMBL:Q7CLD5,Genbank:YP_002348591.1,GeneID:1176529;gbkey=CDS;gene=malM;product=maltose regulon periplasmic protein;protein_id=YP_002348591.1;transl_table=11
NC_003143.1	RefSeq	gene	4144571	4145842	.	-	.	ID=gene3590;Name=lamB;Dbxref=GeneID:1176530;gbkey=Gene;gene=lamB;gene_synonym=malB;locus_tag=YPO3711
NC_003143.1	RefSeq	CDS	4144571	4145842	.	-	0	ID=cds3415;Name=YP_002348592.1;Parent=gene3590;Note=porin involved in the transport of maltose and maltodextrins;Dbxref=InterPro:IPR003192,UniProtKB%2FTrEMBL:Q0WAU6,Genbank:YP_002348592.1,GeneID:1176530;gbkey=CDS;gene=lamB;product=maltoporin;protein_id=YP_002348592.1;transl_table=11
NC_003143.1	RefSeq	gene	4145913	4147022	.	-	.	ID=gene3591;Name=malK;Dbxref=GeneID:1176531;gbkey=Gene;gene=malK;locus_tag=YPO3712
NC_003143.1	RefSeq	CDS	4145913	4147022	.	-	0	ID=cds3416;Name=YP_002348593.1;Parent=gene3591;Note=with malEFG is involved in import of maltose%2Fmaltodextrin;Dbxref=InterPro:IPR003439,InterPro:IPR003593,InterPro:IPR008995,InterPro:IPR013611,UniProtKB%2FTrEMBL:Q0WAU5,Genbank:YP_002348593.1,GeneID:1176531;gbkey=CDS;gene=malK;product=maltose ABC transporter ATP-binding protein;protein_id=YP_002348593.1;transl_table=11
NC_003143.1	RefSeq	region	4146579	4146623	.	-	.	ID=id2671;Note=PS00211 ABC transporters family signature.;Dbxref=GeneID:1176531;gbkey=misc_feature;gene=malK
NC_003143.1	RefSeq	region	4146894	4146917	.	-	.	ID=id2672;Note=PS00017 ATP%2FGTP-binding site motif A %28P-loop%29.;Dbxref=GeneID:1176531;gbkey=misc_feature;gene=malK
NC_003143.1	RefSeq	gene	4147026	4147262	.	-	.	ID=gene3592;Name=YPO3713;Dbxref=GeneID:1176532;gbkey=Gene;locus_tag=YPO3713
NC_003143.1	RefSeq	CDS	4147026	4147262	.	-	0	ID=cds3417;Name=YP_002348594.1;Parent=gene3592;Note=no significant database hits;Dbxref=UniProtKB%2FTrEMBL:Q7CLD7,Genbank:YP_002348594.1,GeneID:1176532;gbkey=CDS;product=hypothetical protein;protein_id=YP_002348594.1;transl_table=11
NC_003143.1	RefSeq	gene	4147824	4149035	.	+	.	ID=gene3593;Name=malE;Dbxref=GeneID:1176533;gbkey=Gene;gene=malE;locus_tag=YPO3714
NC_003143.1	RefSeq	CDS	4147824	4149035	.	+	0	ID=cds3418;Name=YP_002348595.1;Parent=gene3593;Note=functions in the MalKFGE ABC transporter complex to transport maltose into the cell by using ATP hydrolysis;Dbxref=InterPro:IPR006059,InterPro:IPR006060,InterPro:IPR006061,UniProtKB%2FTrEMBL:Q7CLD8,Genbank:YP_002348595.1,GeneID:1176533;gbkey=CDS;gene=malE;product=maltose ABC transporter substrate-binding protein;protein_id=YP_002348595.1;transl_table=11
NC_003143.1	RefSeq	region	4148241	4148294	.	+	.	ID=id2673;Note=PS01037 Bacterial extracellular solute-binding proteins%2C family 1 signature.;Dbxref=GeneID:1176533;gbkey=misc_feature;gene=malE
NC_003143.1	RefSeq	gene	4149222	4150799	.	+	.	ID=gene3594;Name=malF;Dbxref=GeneID:1176534;gbkey=Gene;gene=malF;locus_tag=YPO3715
NC_003143.1	RefSeq	CDS	4149222	4150799	.	+	0	ID=cds3419;Name=YP_002348596.1;Parent=gene3594;Note=with MalKGE is involved in maltose transport into the cell;Dbxref=InterPro:IPR000515,UniProtKB%2FTrEMBL:Q0WAU2,Genbank:YP_002348596.1,GeneID:1176534;gbkey=CDS;gene=malF;product=maltose transporter membrane protein;protein_id=YP_002348596.1;transl_table=11
NC_003143.1	RefSeq	region	4150428	4150514	.	+	.	ID=id2674;Note=PS00402 Binding-protein-dependent transport systems inner membrane comp. sign.;Dbxref=GeneID:1176534;gbkey=misc_feature;gene=malF
NC_003143.1	RefSeq	gene	4150813	4151703	.	+	.	ID=gene3595;Name=malG;Dbxref=GeneID:1176535;gbkey=Gene;gene=malG;locus_tag=YPO3716
NC_003143.1	RefSeq	CDS	4150813	4151703	.	+	0	ID=cds3420;Name=YP_002348597.1;Parent=gene3595;Note=with MalKFE is involved in the transport of maltose into the cell;Dbxref=InterPro:IPR000515,UniProtKB%2FTrEMBL:Q0WAU1,Genbank:YP_002348597.1,GeneID:1176535;gbkey=CDS;gene=malG;product=maltose ABC transporter permease;protein_id=YP_002348597.1;transl_table=11
NC_003143.1	RefSeq	region	4151353	4151439	.	+	.	ID=id2675;Note=PS00402 Binding-protein-dependent transport systems inner membrane comp. sign.;Dbxref=GeneID:1176535;gbkey=misc_feature;gene=malG
NC_003143.1	RefSeq	gene	4151846	4152253	.	-	.	ID=gene3596;Name=yjbA;Dbxref=GeneID:1176536;gbkey=Gene;gene=yjbA;locus_tag=YPO3717
NC_003143.1	RefSeq	CDS	4151846	4152253	.	-	0	ID=cds3421;Name=YP_002348598.1;Parent=gene3596;Dbxref=InterPro:IPR009315,UniProtKB%2FTrEMBL:Q0WAU0,Genbank:YP_002348598.1,GeneID:1176536;gbkey=CDS;gene=yjbA;product=phosphate-starvation-inducible protein PsiE;protein_id=YP_002348598.1;transl_table=11
NC_003143.1	RefSeq	gene	4152388	4154034	.	-	.	ID=gene3597;Name=pgi;Dbxref=GeneID:1176537;gbkey=Gene;gene=pgi;locus_tag=YPO3718
NC_003143.1	RefSeq	CDS	4152388	4154034	.	-	0	ID=cds3422;Name=YP_002348599.1;Parent=gene3597;Note=functions in sugar metabolism in glycolysis and the Embden-Meyerhof pathways %28EMP%29 and in gluconeogenesis%3B catalyzes reversible isomerization of glucose-6-phosphate to fructose-6-phosphate%3B member of PGI family;Dbxref=InterPro:IPR001672,UniProtKB%2FTrEMBL:Q0WAT9,Genbank:YP_002348599.1,GeneID:1176537;gbkey=CDS;gene=pgi;product=glucose-6-phosphate isomerase;protein_id=YP_002348599.1;transl_table=11
NC_003143.1	RefSeq	region	4152493	4152546	.	-	.	ID=id2676;Note=PS00174 Phosphoglucose isomerase signature 2.;Dbxref=GeneID:1176537;gbkey=misc_feature;gene=pgi
NC_003143.1	RefSeq	region	4153201	4153242	.	-	.	ID=id2677;Note=PS00765 Phosphoglucose isomerase signature 1.;Dbxref=GeneID:1176537;gbkey=misc_feature;gene=pgi
NC_003143.1	RefSeq	gene	4154404	4155789	.	+	.	ID=gene3598;Name=lysC;Dbxref=GeneID:1176538;gbkey=Gene;gene=lysC;locus_tag=YPO3719
NC_003143.1	RefSeq	CDS	4154404	4155789	.	+	0	ID=cds3423;Name=YP_002348600.1;Parent=gene3598;Note=catalyzes the formation of 4-phospho-L-aspartate from L-aspartate and ATP%3B functions in amino acid biosynthesis%3B lysine sensitive;Dbxref=InterPro:IPR001048,InterPro:IPR001341,InterPro:IPR002912,InterPro:IPR005260,InterPro:IPR012150,UniProtKB%2FTrEMBL:Q7CLD9,Genbank:YP_002348600.1,GeneID:1176538;gbkey=CDS;gene=lysC;product=aspartate kinase;protein_id=YP_002348600.1;transl_table=11
NC_003143.1	RefSeq	region	4154455	4154481	.	+	.	ID=id2678;Note=PS00324 Aspartokinase signature.;Dbxref=GeneID:1176538;gbkey=misc_feature;gene=lysC
NC_003143.1	RefSeq	gene	4156357	4158042	.	+	.	ID=gene3599;Name=hpmB;Dbxref=GeneID:1176539;gbkey=Gene;gene=hpmB;gene_synonym=shlB;locus_tag=YPO3720
NC_003143.1	RefSeq	CDS	4156357	4158042	.	+	0	ID=cds3424;Name=YP_002348601.1;Parent=gene3599;Dbxref=InterPro:IPR005565,InterPro:IPR013686,UniProtKB%2FTrEMBL:Q0WAT7,Genbank:YP_002348601.1,GeneID:1176539;gbkey=CDS;gene=hpmB;product=hemolysin activator protein;protein_id=YP_002348601.1;transl_table=11
NC_003143.1	RefSeq	region	4156357	4156410	.	+	.	ID=id2679;Note=Predicted N-terminal signal sequence %28probabilty 1.000%29 with cleavage site between residues 18 and 19;Dbxref=GeneID:1176539;gbkey=misc_feature;gene=hpmB
NC_003143.1	RefSeq	gene	4158112	4163019	.	+	.	ID=gene3600;Name=YPO3721;Dbxref=GeneID:1176540;gbkey=Gene;locus_tag=YPO3721
NC_003143.1	RefSeq	CDS	4158112	4163019	.	+	0	ID=cds3425;Name=YP_002348602.1;Parent=gene3600;Dbxref=InterPro:IPR008619,InterPro:IPR008638,InterPro:IPR011050,UniProtKB%2FTrEMBL:Q0WAT6,Genbank:YP_002348602.1,GeneID:1176540;gbkey=CDS;product=hemolysin;protein_id=YP_002348602.1;transl_table=11
NC_003143.1	RefSeq	region	4161715	4161738	.	+	.	ID=id2680;Note=PS00017 ATP%2FGTP-binding site motif A %28P-loop%29.;Dbxref=GeneID:1176540;gbkey=misc_feature
NC_003143.1	RefSeq	gene	4163115	4166810	.	-	.	ID=gene3601;Name=metH;Dbxref=GeneID:1176541;gbkey=Gene;gene=metH;locus_tag=YPO3722
NC_003143.1	RefSeq	CDS	4163115	4166810	.	-	0	ID=cds3426;Name=YP_002348603.1;Parent=gene3601;Note=one of two methionine synthases in Escherichia coli%3B MetH catalyzes a methyl transfer reaction from methyltetrahydrofolate to homocysteine to create methionine%3B requires zinc for activity;Dbxref=InterPro:IPR000489,InterPro:IPR003726,InterPro:IPR003759,InterPro:IPR004223,InterPro:IPR006158,InterPro:IPR011005,InterPro:IPR011822,UniProtKB%2FTrEMBL:Q7CLE0,Genbank:YP_002348603.1,GeneID:1176541;gbkey=CDS;gene=metH;product=B12-dependent methionine synthase;protein_id=YP_002348603.1;transl_table=11
NC_003143.1	RefSeq	gene	4167025	4167869	.	+	.	ID=gene3602;Name=iclR;Dbxref=GeneID:1176542;gbkey=Gene;gene=iclR;locus_tag=YPO3723;pseudo=true
NC_003143.1	RefSeq	region	4167657	4167722	.	+	.	ID=id2681;Note=PS01051 Bacterial regulatory proteins%2C iclR family signature.;Dbxref=GeneID:1176542;gbkey=misc_feature;gene=iclR
NC_003143.1	RefSeq	gene	4167989	4169716	.	-	.	ID=gene3603;Name=aceK;Dbxref=GeneID:1176543;gbkey=Gene;gene=aceK;locus_tag=YPO3724
NC_003143.1	RefSeq	CDS	4167989	4169716	.	-	0	ID=cds3427;Name=YP_002348604.1;Parent=gene3603;Note=catalyzes the phosphorylation%2Fdephosphorylation of the enzyme isocitrate dehydrogenase on a specific serine which regulates activity%3B unphosphorylated IDH is fully active when cells are grown on glucose while the enzyme becomes phosphorylated and inactive in the presence of acetate or ethanol;Dbxref=InterPro:IPR010452,InterPro:IPR011009,UniProtKB%2FTrEMBL:Q0WAT4,Genbank:YP_002348604.1,GeneID:1176543;gbkey=CDS;gene=aceK;product=bifunctional isocitrate dehydrogenase kinase%2Fphosphatase protein;protein_id=YP_002348604.1;transl_table=11
NC_003143.1	RefSeq	region	4168832	4168855	.	-	.	ID=id2682;Note=PS00017 ATP%2FGTP-binding site motif A %28P-loop%29.;Dbxref=GeneID:1176543;gbkey=misc_feature;gene=aceK
NC_003143.1	RefSeq	region	4168925	4169011	.	-	.	ID=id2683;Note=PS00402 Binding-protein-dependent transport systems inner membrane comp. sign.;Dbxref=GeneID:1176543;gbkey=misc_feature;gene=aceK
NC_003143.1	RefSeq	gene	4169972	4171279	.	-	.	ID=gene3604;Name=aceA;Dbxref=GeneID:1176544;gbkey=Gene;gene=aceA;gene_synonym=icl;locus_tag=YPO3725
NC_003143.1	RefSeq	CDS	4169972	4171279	.	-	0	ID=cds3428;Name=YP_002348605.1;Parent=gene3604;Dbxref=InterPro:IPR000918,InterPro:IPR006254,UniProtKB%2FTrEMBL:Q7CLE1,Genbank:YP_002348605.1,GeneID:1176544;gbkey=CDS;gene=aceA;product=isocitrate lyase;protein_id=YP_002348605.1;transl_table=11
NC_003143.1	RefSeq	region	4170431	4170454	.	-	.	ID=id2684;Note=PS00030 Eukaryotic  RNA-binding region RNP-1 signature.;Dbxref=GeneID:1176544;gbkey=misc_feature;gene=aceA
NC_003143.1	RefSeq	region	4170683	4170700	.	-	.	ID=id2685;Note=PS00161 Isocitrate lyase signature.;Dbxref=GeneID:1176544;gbkey=misc_feature;gene=aceA
NC_003143.1	RefSeq	gene	4171326	4172924	.	-	.	ID=gene3605;Name=aceB;Dbxref=GeneID:1176545;gbkey=Gene;gene=aceB;gene_synonym=mas;locus_tag=YPO3726
NC_003143.1	RefSeq	CDS	4171326	4172924	.	-	0	ID=cds3429;Name=YP_002348606.1;Parent=gene3605;Note=Catalyzes the aldol condensation of glyoxylate with acetyl-CoA to form malate as part of the second step of the glyoxylate bypass and an alternative to the tricarboxylic acid cycle;Dbxref=InterPro:IPR001465,InterPro:IPR006252,InterPro:IPR011076,UniProtKB%2FTrEMBL:Q0WAT2,Genbank:YP_002348606.1,GeneID:1176545;gbkey=CDS;gene=aceB;product=malate synthase;protein_id=YP_002348606.1;transl_table=11
NC_003143.1	RefSeq	region	4171539	4171604	.	-	.	ID=id2686;Note=Predicted helix-turn-helix motif with score 1042 %28%2B2.74 SD%29 at aa 452-473%2C sequence YGLMEDAATAEISRTSIWQWIH;Dbxref=GeneID:1176545;gbkey=misc_feature;gene=aceB
NC_003143.1	RefSeq	gene	4173345	4174274	.	-	.	ID=gene3606;Name=metA;Dbxref=GeneID:1176546;gbkey=Gene;gene=metA;locus_tag=YPO3727
NC_003143.1	RefSeq	CDS	4173345	4174274	.	-	0	ID=cds3430;Name=YP_002348607.1;Parent=gene3606;Note=catalyzes the formation of O-succinyl-L-homoserine from succinyl-CoA and L-homoserine in methionine biosynthesis;Dbxref=InterPro:IPR005697,UniProtKB%2FTrEMBL:Q0WAT1,Genbank:YP_002348607.1,GeneID:1176546;gbkey=CDS;gene=metA;product=homoserine O-succinyltransferase;protein_id=YP_002348607.1;transl_table=11
NC_003143.1	RefSeq	gene	4175006	4175140	.	-	.	ID=gene3607;Name=YPOr10;Dbxref=GeneID:1176547;gbkey=Gene;locus_tag=YPOr10
NC_003143.1	RefSeq	rRNA	4175006	4175140	.	-	.	ID=rna75;Parent=gene3607;Note=partial 5SrRNA lacking the first 100 bases.;Dbxref=GeneID:1176547;gbkey=rRNA;product=5S ribosomal RNA
NC_003143.1	RefSeq	exon	4175006	4175140	.	-	.	ID=id2687;Parent=rna75;Note=partial 5SrRNA lacking the first 100 bases.;Dbxref=GeneID:1176547;gbkey=rRNA;product=5S ribosomal RNA
NC_003143.1	RefSeq	gene	4175170	4175245	.	-	.	ID=gene3608;Name=YPt_53;Dbxref=GeneID:1176548;gbkey=Gene;locus_tag=YPt_53
NC_003143.1	RefSeq	tRNA	4175170	4175245	.	-	.	ID=rna76;Parent=gene3608;Note=tRNA Thr anticodon GGT%2C Cove score 88.70;Dbxref=GeneID:1176548;gbkey=tRNA;product=tRNA-Thr
NC_003143.1	RefSeq	exon	4175170	4175245	.	-	.	ID=id2688;Parent=rna76;Note=tRNA Thr anticodon GGT%2C Cove score 88.70;Dbxref=GeneID:1176548;gbkey=tRNA;product=tRNA-Thr
NC_003143.1	RefSeq	gene	4175261	4175376	.	-	.	ID=gene3609;Name=YPOr11;Dbxref=GeneID:1176549;gbkey=Gene;locus_tag=YPOr11
NC_003143.1	RefSeq	rRNA	4175261	4175376	.	-	.	ID=rna77;Parent=gene3609;Note=match to 5SrRNA 1..233  blast score 1144  percent identity 99  %28incl. 23S-5S spacer%29;Dbxref=GeneID:1176549;gbkey=rRNA;product=5S ribosomal RNA
NC_003143.1	RefSeq	exon	4175261	4175376	.	-	.	ID=id2689;Parent=rna77;Note=match to 5SrRNA 1..233  blast score 1144  percent identity 99  %28incl. 23S-5S spacer%29;Dbxref=GeneID:1176549;gbkey=rRNA;product=5S ribosomal RNA
NC_003143.1	RefSeq	gene	4175486	4178392	.	-	.	ID=gene3610;Name=YPOr12;Dbxref=GeneID:1176550;gbkey=Gene;locus_tag=YPOr12
NC_003143.1	RefSeq	rRNA	4175486	4178392	.	-	.	ID=rna78;Parent=gene3610;Note=match to 23S_rRNA 1..2906 %28Y. enterocolitica 23S EMBL:U77925%29;Dbxref=GeneID:1176550;gbkey=rRNA;product=23S ribosomal RNA
NC_003143.1	RefSeq	exon	4175486	4178392	.	-	.	ID=id2690;Parent=rna78;Note=match to 23S_rRNA 1..2906 %28Y. enterocolitica 23S EMBL:U77925%29;Dbxref=GeneID:1176550;gbkey=rRNA;product=23S ribosomal RNA
NC_003143.1	RefSeq	gene	4178611	4178686	.	-	.	ID=gene3611;Name=YPt_54;Dbxref=GeneID:1176551;gbkey=Gene;locus_tag=YPt_54
NC_003143.1	RefSeq	tRNA	4178611	4178686	.	-	.	ID=rna79;Parent=gene3611;Note=tRNA Ala anticodon TGC%2C Cove score 93.97;Dbxref=GeneID:1176551;gbkey=tRNA;product=tRNA-Ala
NC_003143.1	RefSeq	exon	4178611	4178686	.	-	.	ID=id2691;Parent=rna79;Note=tRNA Ala anticodon TGC%2C Cove score 93.97;Dbxref=GeneID:1176551;gbkey=tRNA;product=tRNA-Ala
NC_003143.1	RefSeq	gene	4178738	4178814	.	-	.	ID=gene3612;Name=YPt_55;Dbxref=GeneID:1176552;gbkey=Gene;locus_tag=YPt_55
NC_003143.1	RefSeq	tRNA	4178738	4178814	.	-	.	ID=rna80;Parent=gene3612;Note=tRNA Ile anticodon GAT%2C Cove score 94.77;Dbxref=GeneID:1176552;gbkey=tRNA;product=tRNA-Ile
NC_003143.1	RefSeq	exon	4178738	4178814	.	-	.	ID=id2692;Parent=rna80;Note=tRNA Ile anticodon GAT%2C Cove score 94.77;Dbxref=GeneID:1176552;gbkey=tRNA;product=tRNA-Ile
NC_003143.1	RefSeq	gene	4178944	4180432	.	-	.	ID=gene3613;Name=YPOr13;Dbxref=GeneID:1176553;gbkey=Gene;locus_tag=YPOr13
NC_003143.1	RefSeq	rRNA	4178944	4180432	.	-	.	ID=rna81;Parent=gene3613;Note=match to 16S_rRNA 1..1489  %28EMBL:YPE16SA%29;Dbxref=GeneID:1176553;gbkey=rRNA;product=16S ribosomal RNA
NC_003143.1	RefSeq	exon	4178944	4180432	.	-	.	ID=id2693;Parent=rna81;Note=match to 16S_rRNA 1..1489  %28EMBL:YPE16SA%29;Dbxref=GeneID:1176553;gbkey=rRNA;product=16S ribosomal RNA
NC_003143.1	RefSeq	gene	4180465	4180650	.	+	.	ID=gene3614;Name=YPO3728a;Dbxref=GeneID:16744779;gbkey=Gene;locus_tag=YPO3728a
NC_003143.1	RefSeq	CDS	4180465	4180650	.	+	0	ID=cds3431;Name=YP_008479730.1;Parent=gene3614;Dbxref=Genbank:YP_008479730.1,GeneID:16744779;gbkey=CDS;product=hypothetical protein;protein_id=YP_008479730.1;transl_table=11
NC_003143.1	RefSeq	gene	4181118	4182707	.	+	.	ID=gene3615;Name=purH;Dbxref=GeneID:1176554;gbkey=Gene;gene=purH;locus_tag=YPO3728
NC_003143.1	RefSeq	CDS	4181118	4182707	.	+	0	ID=cds3432;Name=YP_002348608.1;Parent=gene3615;Note=involved in de novo purine biosynthesis;Dbxref=InterPro:IPR002695,InterPro:IPR011607,InterPro:IPR013982,UniProtKB%2FTrEMBL:Q0WAT0,Genbank:YP_002348608.1,GeneID:1176554;gbkey=CDS;gene=purH;product=bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase%2FIMP cyclohydrolase;protein_id=YP_002348608.1;transl_table=11
NC_003143.1	RefSeq	gene	4182767	4184053	.	+	.	ID=gene3616;Name=purD;Dbxref=GeneID:1176555;gbkey=Gene;gene=purD;locus_tag=YPO3729
NC_003143.1	RefSeq	CDS	4182767	4184053	.	+	0	ID=cds3433;Name=YP_002348609.1;Parent=gene3616;Note=catalyzes the formation of N%281%29-%285-phospho-D-ribosyl%29glycinamide from 5-phospho-D-ribosylamine and glycine in purine biosynthesis;Dbxref=InterPro:IPR000115,InterPro:IPR011054,InterPro:IPR011761,InterPro:IPR013815,InterPro:IPR013816,InterPro:IPR013817,UniProtKB%2FTrEMBL:Q0WAS9,Genbank:YP_002348609.1,GeneID:1176555;gbkey=CDS;gene=purD;product=phosphoribosylamine--glycine ligase;protein_id=YP_002348609.1;transl_table=11
NC_003143.1	RefSeq	region	4183634	4183657	.	+	.	ID=id2694;Note=PS00184 Phosphoribosylglycinamide synthetase signature.;Dbxref=GeneID:1176555;gbkey=misc_feature;gene=purD
NC_003143.1	RefSeq	gene	4184201	4184902	.	-	.	ID=gene3617;Name=yjaH;Dbxref=GeneID:1176556;gbkey=Gene;gene=yjaH;locus_tag=YPO3730
NC_003143.1	RefSeq	CDS	4184201	4184902	.	-	0	ID=cds3434;Name=YP_002348610.1;Parent=gene3617;Dbxref=InterPro:IPR010858,UniProtKB%2FTrEMBL:Q7CKT3,Genbank:YP_002348610.1,GeneID:1176556;gbkey=CDS;gene=yjaH;product=hypothetical protein;protein_id=YP_002348610.1;transl_table=11
NC_003143.1	RefSeq	region	4184804	4184836	.	-	.	ID=id2695;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site.;Dbxref=GeneID:1176556;gbkey=misc_feature;gene=yjaH
NC_003143.1	RefSeq	gene	4184904	4185179	.	-	.	ID=gene3618;Name=hupA;Dbxref=GeneID:1176557;gbkey=Gene;gene=hupA;locus_tag=YPO3731
NC_003143.1	RefSeq	CDS	4184904	4185179	.	-	0	ID=cds3435;Name=YP_002348611.1;Parent=gene3618;Note=histone-like DNA-binding protein;Dbxref=InterPro:IPR000119,InterPro:IPR010992,UniProtKB%2FTrEMBL:Q7CKT4,Genbank:YP_002348611.1,GeneID:1176557;gbkey=CDS;gene=hupA;product=transcriptional regulator HU subunit alpha;protein_id=YP_002348611.1;transl_table=11
NC_003143.1	RefSeq	region	4184985	4185044	.	-	.	ID=id2696;Note=PS00045 Bacterial histone-like DNA-binding proteins signature.;Dbxref=GeneID:1176557;gbkey=misc_feature;gene=hupA
NC_003143.1	RefSeq	gene	4185368	4185958	.	-	.	ID=gene3619;Name=YPO3732;Dbxref=GeneID:1176558;gbkey=Gene;locus_tag=YPO3732
NC_003143.1	RefSeq	CDS	4185368	4185958	.	-	0	ID=cds3436;Name=YP_002348612.1;Parent=gene3619;Dbxref=InterPro:IPR007338,UniProtKB%2FTrEMBL:Q7CKT5,Genbank:YP_002348612.1,GeneID:1176558;gbkey=CDS;product=hypothetical protein;protein_id=YP_002348612.1;transl_table=11
NC_003143.1	RefSeq	gene	4186004	4186708	.	-	.	ID=gene3620;Name=nfi;Dbxref=GeneID:1176559;gbkey=Gene;gene=nfi;locus_tag=YPO3733
NC_003143.1	RefSeq	CDS	4186004	4186708	.	-	0	ID=cds3437;Name=YP_002348613.1;Parent=gene3620;Note=Selectively cleaves double-stranded DNA at the second phosphodiester bond 3%27 to a deoxyinosine leaving behind the intact lesion on the nicked DNA%3B cleaves DNA containing urea residues%2C AP sites%2C base mismatches%2C insertion%2Fdeletion mismatches%2C flaps%2C and pseudo-Y structures;Dbxref=InterPro:IPR007581,UniProtKB%2FTrEMBL:Q0WAS5,Genbank:YP_002348613.1,GeneID:1176559;gbkey=CDS;gene=nfi;product=endonuclease V;protein_id=YP_002348613.1;transl_table=11
NC_003143.1	RefSeq	gene	4186774	4187841	.	-	.	ID=gene3621;Name=hemE;Dbxref=GeneID:1176560;gbkey=Gene;gene=hemE;locus_tag=YPO3734
NC_003143.1	RefSeq	CDS	4186774	4187841	.	-	0	ID=cds3438;Name=YP_002348614.1;Parent=gene3621;Note=catalyzes the formation of coproporphyrinogen from uroporphyrinogen III;Dbxref=InterPro:IPR000257,InterPro:IPR006361,UniProtKB%2FTrEMBL:Q0WAS4,Genbank:YP_002348614.1,GeneID:1176560;gbkey=CDS;gene=hemE;product=uroporphyrinogen decarboxylase;protein_id=YP_002348614.1;transl_table=11
NC_003143.1	RefSeq	region	4187368	4187415	.	-	.	ID=id2697;Note=PS00907 Uroporphyrinogen decarboxylase signature 2.;Dbxref=GeneID:1176560;gbkey=misc_feature;gene=hemE
NC_003143.1	RefSeq	region	4187749	4187778	.	-	.	ID=id2698;Note=PS00906 Uroporphyrinogen decarboxylase signature 1.;Dbxref=GeneID:1176560;gbkey=misc_feature;gene=hemE
NC_003143.1	RefSeq	gene	4187960	4188745	.	-	.	ID=gene3622;Name=YPO3735;Dbxref=GeneID:1176561;gbkey=Gene;locus_tag=YPO3735
NC_003143.1	RefSeq	CDS	4187960	4188745	.	-	0	ID=cds3439;Name=YP_002348615.1;Parent=gene3622;Note=no significant database hits;Dbxref=UniProtKB%2FTrEMBL:Q7CKT6,Genbank:YP_002348615.1,GeneID:1176561;gbkey=CDS;product=hypothetical protein;protein_id=YP_002348615.1;transl_table=11
NC_003143.1	RefSeq	gene	4188838	4189620	.	-	.	ID=gene3623;Name=nudC;Dbxref=GeneID:1176562;gbkey=Gene;gene=nudC;locus_tag=YPO3736
NC_003143.1	RefSeq	CDS	4188838	4189620	.	-	0	ID=cds3440;Name=YP_002348616.1;Parent=gene3623;Note=can catalyze hydrolysis of broad range of dinucleotide pyrophosphates but prefers reduced form of NADH%3B requires divalent metal ions such as magnesium and manganese and produces two mononucleoside 5%27-phosphates;Dbxref=InterPro:IPR000086,UniProtKB%2FTrEMBL:Q0WAS2,Genbank:YP_002348616.1,GeneID:1176562;gbkey=CDS;gene=nudC;product=NADH pyrophosphatase;protein_id=YP_002348616.1;transl_table=11
NC_003143.1	RefSeq	region	4189087	4189146	.	-	.	ID=id2699;Note=PS00893 mutT domain signature.;Dbxref=GeneID:1176562;gbkey=misc_feature;gene=nudC
NC_003143.1	RefSeq	gene	4189717	4190226	.	+	.	ID=gene3624;Name=rsd;Dbxref=GeneID:1176563;gbkey=Gene;gene=rsd;locus_tag=YPO3737
NC_003143.1	RefSeq	CDS	4189717	4190226	.	+	0	ID=cds3441;Name=YP_002348617.1;Parent=gene3624;Note=binds specifically to the major sigma factor sigma 70%3B active in stationary phase;Dbxref=InterPro:IPR007448,UniProtKB%2FTrEMBL:Q7CKT7,Genbank:YP_002348617.1,GeneID:1176563;gbkey=CDS;gene=rsd;product=anti-RNA polymerase sigma 70 factor;protein_id=YP_002348617.1;transl_table=11
NC_003143.1	RefSeq	gene	4190349	4190609	.	+	.	ID=gene3625;Name=YPO3738;Dbxref=GeneID:1176564;gbkey=Gene;locus_tag=YPO3738
NC_003143.1	RefSeq	CDS	4190349	4190609	.	+	0	ID=cds3442;Name=YP_002348618.1;Parent=gene3625;Note=no significant database hits;Dbxref=UniProtKB%2FTrEMBL:Q74RE4,Genbank:YP_002348618.1,GeneID:1176564;gbkey=CDS;product=hypothetical protein;protein_id=YP_002348618.1;transl_table=11
NC_003143.1	RefSeq	gene	4190602	4192647	.	+	.	ID=gene3626;Name=thiC;Dbxref=GeneID:1176565;gbkey=Gene;gene=thiC;locus_tag=YPO3739
NC_003143.1	RefSeq	CDS	4190602	4192647	.	+	0	ID=cds3443;Name=YP_002348619.1;Parent=gene3626;Note=required for the synthesis of the hydromethylpyrimidine moiety of thiamine;Dbxref=InterPro:IPR002817,UniProtKB%2FTrEMBL:Q0WAR9,Genbank:YP_002348619.1,GeneID:1176565;gbkey=CDS;gene=thiC;product=thiamine biosynthesis protein ThiC;protein_id=YP_002348619.1;transl_table=11
NC_003143.1	RefSeq	gene	4192661	4193308	.	+	.	ID=gene3627;Name=thiE;Dbxref=GeneID:1176566;gbkey=Gene;gene=thiE;locus_tag=YPO3740
NC_003143.1	RefSeq	CDS	4192661	4193308	.	+	0	ID=cds3444;Name=YP_002348620.1;Parent=gene3627;Note=catalyzes the formation of thiamine monophosphate from 4-methyl-5-%28beta-hydroxyethyl%29-thiazole monophosphate and 4-amino-5-hydroxymethyl pyrimidine pyrophosphate;Dbxref=InterPro:IPR003733,InterPro:IPR012264,UniProtKB%2FTrEMBL:Q0WAR8,Genbank:YP_002348620.1,GeneID:1176566;gbkey=CDS;gene=thiE;product=thiamine-phosphate pyrophosphorylase;protein_id=YP_002348620.1;transl_table=11
NC_003143.1	RefSeq	gene	4193298	4194095	.	+	.	ID=gene3628;Name=thiF;Dbxref=GeneID:1176567;gbkey=Gene;gene=thiF;locus_tag=YPO3741
NC_003143.1	RefSeq	CDS	4193298	4194095	.	+	0	ID=cds3445;Name=YP_002348621.1;Parent=gene3628;Dbxref=InterPro:IPR000594,InterPro:IPR007901,InterPro:IPR009036,UniProtKB%2FTrEMBL:Q7CKT8,Genbank:YP_002348621.1,GeneID:1176567;gbkey=CDS;gene=thiF;product=thiamine biosynthesis protein ThiF;protein_id=YP_002348621.1;transl_table=11
NC_003143.1	RefSeq	region	4193406	4193474	.	+	.	ID=id2700;Note=1 probable transmembrane helix predicted;Dbxref=GeneID:1176567;gbkey=misc_feature;gene=thiF
NC_003143.1	RefSeq	gene	4194116	4194307	.	+	.	ID=gene3629;Name=YPO3741a;Dbxref=GeneID:17699571;gbkey=Gene;locus_tag=YPO3741a
NC_003143.1	RefSeq	CDS	4194116	4194307	.	+	0	ID=cds3446;Name=YP_008853948.1;Parent=gene3629;Dbxref=Genbank:YP_008853948.1,GeneID:17699571;gbkey=CDS;product=sulfur carrier protein ThiS;protein_id=YP_008853948.1;transl_table=11
NC_003143.1	RefSeq	gene	4194309	4195124	.	+	.	ID=gene3630;Name=thiG;Dbxref=GeneID:1176568;gbkey=Gene;gene=thiG;locus_tag=YPO3742
NC_003143.1	RefSeq	CDS	4194309	4195124	.	+	0	ID=cds3447;Name=YP_002348622.1;Parent=gene3630;Note=functions in thiamine %28vitamin B1%29 biosynthesis%3B in Bacillus subtilis this enzyme catalyzes the formation of thiazole from dehydroxyglycine and 1-deoxy-D-xylulose-5-phosphate and ThiS-thiocarboxylate;Dbxref=InterPro:IPR008867,UniProtKB%2FTrEMBL:Q0WAR6,Genbank:YP_002348622.1,GeneID:1176568;gbkey=CDS;gene=thiG;product=thiazole synthase;protein_id=YP_002348622.1;transl_table=11
NC_003143.1	RefSeq	gene	4195117	4196247	.	+	.	ID=gene3631;Name=thiH;Dbxref=GeneID:1176569;gbkey=Gene;gene=thiH;locus_tag=YPO3743
NC_003143.1	RefSeq	CDS	4195117	4196247	.	+	0	ID=cds3448;Name=YP_002348623.1;Parent=gene3631;Note=in Escherichia coli this enzyme functions in thiamine biosynthesis along with thiFSGI and iscS%3B with ThiFSG catalyzes the formation of thiazole phosphate from tyrosine%2C cysteine and 1-deoxy-D-xylulose-5-phosphate%3B forms a complex with ThiG%3B contains an iron-sulfur center;Dbxref=InterPro:IPR007197,InterPro:IPR010722,InterPro:IPR012726,UniProtKB%2FTrEMBL:Q0WAR5,Genbank:YP_002348623.1,GeneID:1176569;gbkey=CDS;gene=thiH;product=thiamine biosynthesis protein ThiH;protein_id=YP_002348623.1;transl_table=11
NC_003143.1	RefSeq	gene	4196290	4196403	.	-	.	ID=gene3632;Name=YPO3744;Dbxref=GeneID:1176570;gbkey=Gene;locus_tag=YPO3744
NC_003143.1	RefSeq	CDS	4196290	4196403	.	-	0	ID=cds3449;Name=YP_002348624.1;Parent=gene3632;Note=no significant database hits;Dbxref=UniProtKB%2FTrEMBL:Q74RE0,Genbank:YP_002348624.1,GeneID:1176570;gbkey=CDS;product=hypothetical protein;protein_id=YP_002348624.1;transl_table=11
NC_003143.1	RefSeq	repeat_region	4196534	4197245	.	+	.	ID=id2701;Note=Contains a %27G%27 at nucleotide position 315%7EIS200-like insertion sequence:IS1541;gbkey=repeat_region
NC_003143.1	RefSeq	gene	4196679	4197137	.	+	.	ID=gene3633;Name=tnp;Dbxref=GeneID:1176571;gbkey=Gene;gene=tnp;locus_tag=YPO3745
NC_003143.1	RefSeq	CDS	4196679	4197137	.	+	0	ID=cds3450;Name=YP_002348625.1;Parent=gene3633;Dbxref=InterPro:IPR002686,UniProtKB%2FTrEMBL:Q74YM6,Genbank:YP_002348625.1,GeneID:1176571;gbkey=CDS;gene=tnp;product=transposase for the IS1541 insertion element;protein_id=YP_002348625.1;transl_table=11
NC_003143.1	RefSeq	gene	4197264	4201484	.	-	.	ID=gene3634;Name=rpoC;Dbxref=GeneID:1176572;gbkey=Gene;gene=rpoC;gene_synonym=tabB;locus_tag=YPO3746
NC_003143.1	RefSeq	CDS	4197264	4201484	.	-	0	ID=cds3451;Name=YP_002348626.1;Parent=gene3634;Note=DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Subunit beta%27 binds to sigma factor allowing it to bind to the -10 region of the promoter;Dbxref=InterPro:IPR000722,InterPro:IPR006592,InterPro:IPR007066,InterPro:IPR007080,InterPro:IPR007081,InterPro:IPR007083,InterPro:IPR012754,UniProtKB%2FTrEMBL:Q0WAR2,Genbank:YP_002348626.1,GeneID:1176572;gbkey=CDS;gene=rpoC;product=DNA-directed RNA polymerase subunit beta%27;protein_id=YP_002348626.1;transl_table=11
NC_003143.1	RefSeq	gene	4201613	4205641	.	-	.	ID=gene3635;Name=rpoB;Dbxref=GeneID:1176573;gbkey=Gene;gene=rpoB;gene_synonym=nitB,rif,ron,rpoB,stl,stv,tabD;locus_tag=YPO3747
NC_003143.1	RefSeq	CDS	4201613	4205641	.	-	0	ID=cds3452;Name=YP_002348627.1;Parent=gene3635;Note=DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates%3B beta subunit is part of the catalytic core which binds with a sigma factor to produce the holoenzyme;Dbxref=InterPro:IPR007120,InterPro:IPR007121,InterPro:IPR007641,InterPro:IPR007642,InterPro:IPR007644,InterPro:IPR007645,InterPro:IPR010243,UniProtKB%2FTrEMBL:Q0WAR1,Genbank:YP_002348627.1,GeneID:1176573;gbkey=CDS;gene=rpoB;product=DNA-directed RNA polymerase subunit beta;protein_id=YP_002348627.1;transl_table=11
NC_003143.1	RefSeq	region	4202417	4202455	.	-	.	ID=id2702;Note=PS01166 RNA polymerases beta chain signature.;Dbxref=GeneID:1176573;gbkey=misc_feature;gene=rpoB
NC_003143.1	RefSeq	gene	4205984	4206352	.	-	.	ID=gene3636;Name=rplL;Dbxref=GeneID:1176574;gbkey=Gene;gene=rplL;locus_tag=YPO3748
NC_003143.1	RefSeq	CDS	4205984	4206352	.	-	0	ID=cds3453;Name=YP_002348628.1;Parent=gene3636;Note=present in two forms%3B L12 is normal%2C while L7 is aminoacylated at the N-terminal serine%3B the only multicopy ribosomal protein%3B 4:1 ratio of L7%2FL12 per ribosome%3B two L12 dimers bind L10%3B critically important for translation efficiency and fidelity%3B stimulates GTPase activity of translation factors;Dbxref=InterPro:IPR000206,InterPro:IPR008932,InterPro:IPR013823,UniProtKB%2FTrEMBL:Q0WAR0,Genbank:YP_002348628.1,GeneID:1176574;gbkey=CDS;gene=rplL;product=50S ribosomal protein L7%2FL12;protein_id=YP_002348628.1;transl_table=11
NC_003143.1	RefSeq	gene	4206419	4206916	.	-	.	ID=gene3637;Name=rplJ;Dbxref=GeneID:1176575;gbkey=Gene;gene=rplJ;locus_tag=YPO3749
NC_003143.1	RefSeq	CDS	4206419	4206916	.	-	0	ID=cds3454;Name=YP_002348629.1;Parent=gene3637;Note=binds the two ribosomal protein L7%2FL12 dimers and anchors them to the large ribosomal subunit;Dbxref=InterPro:IPR001790,InterPro:IPR002363,UniProtKB%2FTrEMBL:Q0WAQ9,Genbank:YP_002348629.1,GeneID:1176575;gbkey=CDS;gene=rplJ;product=50S ribosomal protein L10;protein_id=YP_002348629.1;transl_table=11
NC_003143.1	RefSeq	region	4206791	4206832	.	-	.	ID=id2703;Note=PS01109 Ribosomal protein L10 signature.;Dbxref=GeneID:1176575;gbkey=misc_feature;gene=rplJ
NC_003143.1	RefSeq	gene	4207281	4207985	.	-	.	ID=gene3638;Name=rplA;Dbxref=GeneID:1176576;gbkey=Gene;gene=rplA;locus_tag=YPO3750
NC_003143.1	RefSeq	CDS	4207281	4207985	.	-	0	ID=cds3455;Name=YP_002348630.1;Parent=gene3638;Note=in Escherichia coli and Methanococcus%2C this protein autoregulates expression%3B the binding site in the mRNA mimics the binding site in the 23S rRNA;Dbxref=InterPro:IPR002143,InterPro:IPR005878,UniProtKB%2FTrEMBL:Q0WAQ8,Genbank:YP_002348630.1,GeneID:1176576;gbkey=CDS;gene=rplA;product=50S ribosomal protein L1;protein_id=YP_002348630.1;transl_table=11
NC_003143.1	RefSeq	region	4207569	4207625	.	-	.	ID=id2704;Note=PS01199 Ribosomal protein L1 signature.;Dbxref=GeneID:1176576;gbkey=misc_feature;gene=rplA
NC_003143.1	RefSeq	gene	4207989	4208417	.	-	.	ID=gene3639;Name=rplK;Dbxref=GeneID:1176577;gbkey=Gene;gene=rplK;locus_tag=YPO3751
NC_003143.1	RefSeq	CDS	4207989	4208417	.	-	0	ID=cds3456;Name=YP_002348631.1;Parent=gene3639;Note=binds directly to 23S ribosomal RNA;Dbxref=InterPro:IPR000911,InterPro:IPR006519,UniProtKB%2FTrEMBL:Q0WAQ7,Genbank:YP_002348631.1,GeneID:1176577;gbkey=CDS;gene=rplK;product=50S ribosomal protein L11;protein_id=YP_002348631.1;transl_table=11
NC_003143.1	RefSeq	region	4207992	4208039	.	-	.	ID=id2705;Note=PS00359 Ribosomal protein L11 signature.;Dbxref=GeneID:1176577;gbkey=misc_feature;gene=rplK
NC_003143.1	RefSeq	gene	4208608	4209153	.	-	.	ID=gene3640;Name=nusG;Dbxref=GeneID:1176578;gbkey=Gene;gene=nusG;locus_tag=YPO3752
NC_003143.1	RefSeq	CDS	4208608	4209153	.	-	0	ID=cds3457;Name=YP_002348632.1;Parent=gene3640;Note=Modulates Rho-dependent transcription termination;Dbxref=InterPro:IPR001062,InterPro:IPR005824,InterPro:IPR006645,InterPro:IPR006646,InterPro:IPR008991,UniProtKB%2FTrEMBL:Q0WAQ6,Genbank:YP_002348632.1,GeneID:1176578;gbkey=CDS;gene=nusG;product=transcription antitermination protein NusG;protein_id=YP_002348632.1;transl_table=11
NC_003143.1	RefSeq	region	4208635	4208664	.	-	.	ID=id2706;Note=PS01014 Transcription termination factor nusG signature.;Dbxref=GeneID:1176578;gbkey=misc_feature;gene=nusG
NC_003143.1	RefSeq	gene	4209155	4209538	.	-	.	ID=gene3641;Name=secE;Dbxref=GeneID:1176579;gbkey=Gene;gene=secE;locus_tag=YPO3753
NC_003143.1	RefSeq	CDS	4209155	4209538	.	-	0	ID=cds3458;Name=YP_002348633.1;Parent=gene3641;Note=forms a complex with SecY and SecG%3B SecYEG forms a  protein-conducting channel to which secA binds and translocates targeted polypeptides across the cytoplasmic membrane%2C a process driven by ATP and a proton-motive force;Dbxref=InterPro:IPR001901,InterPro:IPR005807,UniProtKB%2FTrEMBL:Q0WAQ5,Genbank:YP_002348633.1,GeneID:1176579;gbkey=CDS;gene=secE;product=preprotein translocase subunit SecE;protein_id=YP_002348633.1;transl_table=11
NC_003143.1	RefSeq	region	4209242	4209328	.	-	.	ID=id2707;Note=PS01067 Protein secE%2Fsec61-gamma signature.;Dbxref=GeneID:1176579;gbkey=misc_feature;gene=secE
NC_003143.1	RefSeq	gene	4209789	4210973	.	-	.	ID=gene3642;Name=tuf;Dbxref=GeneID:1176580;gbkey=Gene;gene=tuf;gene_synonym=tufB;locus_tag=YPO3754
NC_003143.1	RefSeq	CDS	4209789	4210973	.	-	0	ID=cds3459;Name=YP_002348634.1;Parent=gene3642;Note=EF-Tu%3B promotes GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis%3B when the tRNA anticodon matches the mRNA codon%2C GTP hydrolysis results%3B the inactive EF-Tu-GDP leaves the ribosome and release of GDP is promoted by elongation factor Ts%3B many prokaryotes have two copies of the gene encoding EF-Tu;Dbxref=InterPro:IPR000795,InterPro:IPR004160,InterPro:IPR004161,InterPro:IPR004541,InterPro:IPR005225,InterPro:IPR009000,InterPro:IPR009001,UniProtKB%2FTrEMBL:Q0WAQ4,Genbank:YP_002348634.1,GeneID:1176580;gbkey=CDS;gene=tuf;product=elongation factor Tu;protein_id=YP_002348634.1;transl_table=11
NC_003143.1	RefSeq	region	4210776	4210823	.	-	.	ID=id2708;Note=PS00301 GTP-binding elongation factors signature.;Dbxref=GeneID:1176580;gbkey=misc_feature;gene=tuf
NC_003143.1	RefSeq	region	4210896	4210919	.	-	.	ID=id2709;Note=PS00017 ATP%2FGTP-binding site motif A %28P-loop%29.;Dbxref=GeneID:1176580;gbkey=misc_feature;gene=tuf
NC_003143.1	RefSeq	gene	4211082	4211157	.	-	.	ID=gene3643;Name=YPt_56;Dbxref=GeneID:1176581;gbkey=Gene;locus_tag=YPt_56
NC_003143.1	RefSeq	tRNA	4211082	4211157	.	-	.	ID=rna82;Parent=gene3643;Note=tRNA Thr anticodon GGT%2C Cove score 94.75;Dbxref=GeneID:1176581;gbkey=tRNA;product=tRNA-Thr
NC_003143.1	RefSeq	exon	4211082	4211157	.	-	.	ID=id2710;Parent=rna82;Note=tRNA Thr anticodon GGT%2C Cove score 94.75;Dbxref=GeneID:1176581;gbkey=tRNA;product=tRNA-Thr
NC_003143.1	RefSeq	gene	4211164	4211238	.	-	.	ID=gene3644;Name=YPt_57;Dbxref=GeneID:1176582;gbkey=Gene;locus_tag=YPt_57
NC_003143.1	RefSeq	tRNA	4211164	4211238	.	-	.	ID=rna83;Parent=gene3644;Note=tRNA Gly anticodon TCC%2C Cove score 63.22;Dbxref=GeneID:1176582;gbkey=tRNA;product=tRNA-Gly
NC_003143.1	RefSeq	exon	4211164	4211238	.	-	.	ID=id2711;Parent=rna83;Note=tRNA Gly anticodon TCC%2C Cove score 63.22;Dbxref=GeneID:1176582;gbkey=tRNA;product=tRNA-Gly
NC_003143.1	RefSeq	gene	4211388	4211472	.	-	.	ID=gene3645;Name=YPt_58;Dbxref=GeneID:1176583;gbkey=Gene;locus_tag=YPt_58
NC_003143.1	RefSeq	tRNA	4211388	4211472	.	-	.	ID=rna84;Parent=gene3645;Note=tRNA Tyr anticodon GTA%2C Cove score 66.93;Dbxref=GeneID:1176583;gbkey=tRNA;product=tRNA-Tyr
NC_003143.1	RefSeq	exon	4211388	4211472	.	-	.	ID=id2712;Parent=rna84;Note=tRNA Tyr anticodon GTA%2C Cove score 66.93;Dbxref=GeneID:1176583;gbkey=tRNA;product=tRNA-Tyr
NC_003143.1	RefSeq	gene	4211491	4211566	.	-	.	ID=gene3646;Name=YPt_59;Dbxref=GeneID:1176584;gbkey=Gene;locus_tag=YPt_59
NC_003143.1	RefSeq	tRNA	4211491	4211566	.	-	.	ID=rna85;Parent=gene3646;Note=tRNA Thr anticodon TGT%2C Cove score 93.97;Dbxref=GeneID:1176584;gbkey=tRNA;product=tRNA-Thr
NC_003143.1	RefSeq	exon	4211491	4211566	.	-	.	ID=id2713;Parent=rna85;Note=tRNA Thr anticodon TGT%2C Cove score 93.97;Dbxref=GeneID:1176584;gbkey=tRNA;product=tRNA-Thr
NC_003143.1	RefSeq	repeat_region	4211964	4213917	.	-	.	ID=id2714;Note=insertion sequence:IS100;gbkey=repeat_region
NC_003143.1	RefSeq	repeat_region	4211964	4211991	.	+	.	ID=id2715;Note=IS100 inverted repeat;gbkey=repeat_region
NC_003143.1	RefSeq	gene	4212030	4212812	.	-	.	ID=gene3647;Name=YPO3755;Note=ypmt1.57c;Dbxref=GeneID:1176585;gbkey=Gene;locus_tag=YPO3755
NC_003143.1	RefSeq	CDS	4212030	4212812	.	-	0	ID=cds3460;Name=YP_002348635.1;Parent=gene3647;Dbxref=InterPro:IPR001270,InterPro:IPR002611,InterPro:IPR003593,UniProtKB%2FTrEMBL:Q7ARK4,Genbank:YP_002348635.1,GeneID:1176585;gbkey=CDS;product=transposase%2FIS protein;protein_id=YP_002348635.1;transl_table=11
NC_003143.1	RefSeq	region	4212462	4212485	.	-	.	ID=id2716;Note=PS00017 ATP%2FGTP-binding site motif A %28P-loop%29.;Dbxref=GeneID:1176585;gbkey=misc_feature
NC_003143.1	RefSeq	gene	4212809	4213831	.	-	.	ID=gene3648;Name=y1093;Dbxref=GeneID:1176586;gbkey=Gene;gene=y1093;gene_synonym=ypmt1;locus_tag=YPO3756
NC_003143.1	RefSeq	CDS	4212809	4213831	.	-	0	ID=cds3461;Name=YP_002348636.1;Parent=gene3648;Dbxref=InterPro:IPR001584,InterPro:IPR006120,InterPro:IPR009057,InterPro:IPR012287,InterPro:IPR012337,UniProtKB%2FTrEMBL:Q7ARN5,Genbank:YP_002348636.1,GeneID:1176586;gbkey=CDS;gene=y1093;product=transposase for insertion sequence IS100;protein_id=YP_002348636.1;transl_table=11
NC_003143.1	RefSeq	region	4213715	4213780	.	-	.	ID=id2717;Note=Predicted helix-turn-helix motif with score 2147 %28%2B6.50 SD%29 at aa 18-39%2C sequence MSSRAIARELGISRNTVKRYLQ;Dbxref=GeneID:1176586;gbkey=misc_feature;gene=y1093
NC_003143.1	RefSeq	repeat_region	4213890	4213917	.	-	.	ID=id2718;Note=IS100 inverted repeat;gbkey=repeat_region
NC_003143.1	RefSeq	gene	4213921	4214472	.	+	.	ID=gene3649;Name=YPO3757;Dbxref=GeneID:1176587;gbkey=Gene;locus_tag=YPO3757
NC_003143.1	RefSeq	CDS	4213921	4214472	.	+	0	ID=cds3462;Name=YP_002348637.1;Parent=gene3649;Dbxref=InterPro:IPR000182,UniProtKB%2FTrEMBL:Q74R05,Genbank:YP_002348637.1,GeneID:1176587;gbkey=CDS;product=acetyltransferase;protein_id=YP_002348637.1;transl_table=11
NC_003143.1	RefSeq	gene	4214683	4215633	.	+	.	ID=gene3650;Name=coaA;Dbxref=GeneID:1176588;gbkey=Gene;gene=coaA;gene_synonym=panK,rts;locus_tag=YPO3758
NC_003143.1	RefSeq	CDS	4214683	4215633	.	+	0	ID=cds3463;Name=YP_002348638.1;Parent=gene3650;Note=catalyzes the formation of %28R%29-4%27-phosphopantothenate in coenzyme A biosynthesis;Dbxref=InterPro:IPR004566,InterPro:IPR006083,UniProtKB%2FTrEMBL:Q0WAQ0,Genbank:YP_002348638.1,GeneID:1176588;gbkey=CDS;gene=coaA;product=pantothenate kinase;protein_id=YP_002348638.1;transl_table=11
NC_003143.1	RefSeq	region	4214965	4214988	.	+	.	ID=id2719;Note=PS00017 ATP%2FGTP-binding site motif A %28P-loop%29.;Dbxref=GeneID:1176588;gbkey=misc_feature;gene=coaA
NC_003143.1	RefSeq	gene	4215668	4216627	.	-	.	ID=gene3651;Name=birA;Dbxref=GeneID:1176589;gbkey=Gene;gene=birA;gene_synonym=dhbB;locus_tag=YPO3759
NC_003143.1	RefSeq	CDS	4215668	4216627	.	-	0	ID=cds3464;Name=YP_002348639.1;Parent=gene3651;Note=catalyzes the formation of biotinyl-5%27-AMP%2C also acts as a transcriptional repressor of the biotin operon;Dbxref=InterPro:IPR003142,InterPro:IPR004143,InterPro:IPR004408,InterPro:IPR004409,InterPro:IPR008988,InterPro:IPR011991,InterPro:IPR013196,UniProtKB%2FTrEMBL:Q7CKU2,Genbank:YP_002348639.1,GeneID:1176589;gbkey=CDS;gene=birA;product=biotin--protein ligase;protein_id=YP_002348639.1;transl_table=11
NC_003143.1	RefSeq	region	4216505	4216570	.	-	.	ID=id2720;Note=Predicted helix-turn-helix motif with score 1450 %28%2B4.13 SD%29 at aa 20-41%2C sequence HSGEQLGETLGMSRAAINKHMQ;Dbxref=GeneID:1176589;gbkey=misc_feature;gene=birA
NC_003143.1	RefSeq	gene	4216624	4217661	.	-	.	ID=gene3652;Name=murB;Dbxref=GeneID:1176590;gbkey=Gene;gene=murB;locus_tag=YPO3760
NC_003143.1	RefSeq	CDS	4216624	4217661	.	-	0	ID=cds3465;Name=YP_002348640.1;Parent=gene3652;Note=catalyzes the reduction of UDP-N-acetylglucosamine enolpyruvate to form UDP-N-acetylmuramate in peptidoglycan biosynthesis;Dbxref=InterPro:IPR003170,InterPro:IPR006094,InterPro:IPR011601,UniProtKB%2FTrEMBL:Q0WAP8,Genbank:YP_002348640.1,GeneID:1176590;gbkey=CDS;gene=murB;product=UDP-N-acetylenolpyruvoylglucosamine reductase;protein_id=YP_002348640.1;transl_table=11
NC_003143.1	RefSeq	gene	4218125	4218240	.	-	.	ID=gene3653;Name=YPOr14;Dbxref=GeneID:1176591;gbkey=Gene;locus_tag=YPOr14
NC_003143.1	RefSeq	rRNA	4218125	4218240	.	-	.	ID=rna86;Parent=gene3653;Note=match to 5SrRNA 1..234  blast score 1149  percent identity 99  %28incl. 23S-5S spacer%29;Dbxref=GeneID:1176591;gbkey=rRNA;product=5S ribosomal RNA
NC_003143.1	RefSeq	exon	4218125	4218240	.	-	.	ID=id2721;Parent=rna86;Note=match to 5SrRNA 1..234  blast score 1149  percent identity 99  %28incl. 23S-5S spacer%29;Dbxref=GeneID:1176591;gbkey=rRNA;product=5S ribosomal RNA
NC_003143.1	RefSeq	gene	4218350	4221256	.	-	.	ID=gene3654;Name=YPOr15;Dbxref=GeneID:1176592;gbkey=Gene;locus_tag=YPOr15
NC_003143.1	RefSeq	rRNA	4218350	4221256	.	-	.	ID=rna87;Parent=gene3654;Note=match to 23S_rRNA 1..2906 %28Y. enterocolitica 23S EMBL:U77925%29;Dbxref=GeneID:1176592;gbkey=rRNA;product=23S ribosomal RNA
NC_003143.1	RefSeq	exon	4218350	4221256	.	-	.	ID=id2722;Parent=rna87;Note=match to 23S_rRNA 1..2906 %28Y. enterocolitica 23S EMBL:U77925%29;Dbxref=GeneID:1176592;gbkey=rRNA;product=23S ribosomal RNA
NC_003143.1	RefSeq	gene	4221475	4221550	.	-	.	ID=gene3655;Name=YPt_60;Dbxref=GeneID:1176593;gbkey=Gene;locus_tag=YPt_60
NC_003143.1	RefSeq	tRNA	4221475	4221550	.	-	.	ID=rna88;Parent=gene3655;Note=tRNA Ala anticodon TGC%2C Cove score 93.97;Dbxref=GeneID:1176593;gbkey=tRNA;product=tRNA-Ala
NC_003143.1	RefSeq	exon	4221475	4221550	.	-	.	ID=id2723;Parent=rna88;Note=tRNA Ala anticodon TGC%2C Cove score 93.97;Dbxref=GeneID:1176593;gbkey=tRNA;product=tRNA-Ala
NC_003143.1	RefSeq	gene	4221602	4221678	.	-	.	ID=gene3656;Name=YPt_61;Dbxref=GeneID:1176594;gbkey=Gene;locus_tag=YPt_61
NC_003143.1	RefSeq	tRNA	4221602	4221678	.	-	.	ID=rna89;Parent=gene3656;Note=tRNA Ile anticodon GAT%2C Cove score 94.77;Dbxref=GeneID:1176594;gbkey=tRNA;product=tRNA-Ile
NC_003143.1	RefSeq	exon	4221602	4221678	.	-	.	ID=id2724;Parent=rna89;Note=tRNA Ile anticodon GAT%2C Cove score 94.77;Dbxref=GeneID:1176594;gbkey=tRNA;product=tRNA-Ile
NC_003143.1	RefSeq	gene	4221808	4223296	.	-	.	ID=gene3657;Name=YPOr16;Dbxref=GeneID:1176595;gbkey=Gene;locus_tag=YPOr16
NC_003143.1	RefSeq	rRNA	4221808	4223296	.	-	.	ID=rna90;Parent=gene3657;Note=match to 16S_rRNA 1..1489%28EMBL:YPE16SA%29;Dbxref=GeneID:1176595;gbkey=rRNA;product=16S ribosomal RNA
NC_003143.1	RefSeq	exon	4221808	4223296	.	-	.	ID=id2725;Parent=rna90;Note=match to 16S_rRNA 1..1489%28EMBL:YPE16SA%29;Dbxref=GeneID:1176595;gbkey=rRNA;product=16S ribosomal RNA
NC_003143.1	RefSeq	gene	4223329	4223514	.	+	.	ID=gene3658;Name=YPO3760a;Dbxref=GeneID:16744780;gbkey=Gene;locus_tag=YPO3760a
NC_003143.1	RefSeq	CDS	4223329	4223514	.	+	0	ID=cds3466;Name=YP_008479731.1;Parent=gene3658;Dbxref=Genbank:YP_008479731.1,GeneID:16744780;gbkey=CDS;product=hypothetical protein;protein_id=YP_008479731.1;transl_table=11
NC_003143.1	RefSeq	gene	4223798	4224331	.	-	.	ID=gene3659;Name=hemG;Dbxref=GeneID:1176596;gbkey=Gene;gene=hemG;locus_tag=YPO3761
NC_003143.1	RefSeq	CDS	4223798	4224331	.	-	0	ID=cds3467;Name=YP_002348641.1;Parent=gene3659;Note=catalyzes the oxidation of protoporphyrinogen IX to form protoporphyrin IX;Dbxref=InterPro:IPR001226,InterPro:IPR008254,UniProtKB%2FTrEMBL:Q7CKU3,Genbank:YP_002348641.1,GeneID:1176596;gbkey=CDS;gene=hemG;product=protoporphyrinogen oxidase;protein_id=YP_002348641.1;transl_table=11
NC_003143.1	RefSeq	region	4224269	4224319	.	-	.	ID=id2726;Note=PS00201 Flavodoxin signature.;Dbxref=GeneID:1176596;gbkey=misc_feature;gene=hemG
NC_003143.1	RefSeq	gene	4224353	4225804	.	-	.	ID=gene3660;Name=trkH;Dbxref=GeneID:1176597;gbkey=Gene;gene=trkH;locus_tag=YPO3762
NC_003143.1	RefSeq	CDS	4224353	4225804	.	-	0	ID=cds3468;Name=YP_002348642.1;Parent=gene3660;Dbxref=InterPro:IPR003445,InterPro:IPR004772,UniProtKB%2FTrEMBL:Q7CKU4,Genbank:YP_002348642.1,GeneID:1176597;gbkey=CDS;gene=trkH;product=potassium transporter;protein_id=YP_002348642.1;transl_table=11
NC_003143.1	RefSeq	gene	4225844	4226320	.	-	.	ID=gene3661;Name=YPO3764a;Dbxref=GeneID:16744781;gbkey=Gene;locus_tag=YPO3764a
NC_003143.1	RefSeq	CDS	4225844	4226320	.	-	0	ID=cds3469;Name=YP_008479732.1;Parent=gene3661;Dbxref=Genbank:YP_008479732.1,GeneID:16744781;gbkey=CDS;product=hypothetical protein;protein_id=YP_008479732.1;transl_table=11
NC_003143.1	RefSeq	region	4226129	4226218	.	-	.	ID=id2727;Note=PS00910 Uncharacterized protein family UPF0029 signature.;Dbxref=GeneID:16744781;gbkey=misc_feature
NC_003143.1	RefSeq	repeat_region	4226285	4226996	.	-	.	ID=id2728;Note=Contains a %27A%27 at nucleotide position 315%7EIS200-like insertion sequence:IS1541;gbkey=repeat_region
NC_003143.1	RefSeq	gene	4226393	4226851	.	-	.	ID=gene3662;Name=tnp;Dbxref=GeneID:1176599;gbkey=Gene;gene=tnp;locus_tag=YPO3764
NC_003143.1	RefSeq	CDS	4226393	4226851	.	-	0	ID=cds3470;Name=YP_002348643.1;Parent=gene3662;Dbxref=InterPro:IPR002686,UniProtKB%2FTrEMBL:Q56938,Genbank:YP_002348643.1,GeneID:1176599;gbkey=CDS;gene=tnp;product=transposase for the IS1541 insertion element;protein_id=YP_002348643.1;transl_table=11
NC_003143.1	RefSeq	gene	4227165	4228496	.	-	.	ID=gene3663;Name=pepQ;Dbxref=GeneID:1176600;gbkey=Gene;gene=pepQ;locus_tag=YPO3765
NC_003143.1	RefSeq	CDS	4227165	4228496	.	-	0	ID=cds3471;Name=YP_002348644.1;Parent=gene3663;Note=catalyzes the hydrolysis of dipeptides with a proline at the C-terminal%3B also catalyzes the low efficiency hydrolysis of organophosphate di- and tri-esters;Dbxref=InterPro:IPR000994,InterPro:IPR001131,UniProtKB%2FTrEMBL:Q0WAP4,Genbank:YP_002348644.1,GeneID:1176600;gbkey=CDS;gene=pepQ;product=proline dipeptidase;protein_id=YP_002348644.1;transl_table=11
NC_003143.1	RefSeq	region	4227456	4227494	.	-	.	ID=id2729;Note=PS00491 Aminopeptidase P and proline dipeptidase signature.;Dbxref=GeneID:1176600;gbkey=misc_feature;gene=pepQ
NC_003143.1	RefSeq	gene	4228823	4231012	.	+	.	ID=gene3664;Name=fadB;Dbxref=GeneID:1176601;gbkey=Gene;gene=fadB;gene_synonym=oldB;locus_tag=YPO3766
NC_003143.1	RefSeq	CDS	4228823	4231012	.	+	0	ID=cds3472;Name=YP_002348645.1;Parent=gene3664;Note=includes enoyl-CoA hydratase%2C delta%283%29-cis-delta%282%29-trans-enoyl-CoA isomerase%2C 3-hydroxyacyl-CoA dehydrogenase%2C and 3-hydroxybutyryl-CoA epimerase%3B catalyzes the formation of an hydroxyacyl-CoA by addition of water on enoyl-CoA%3B also exhibits 3-hydroxyacyl-CoA epimerase and 3-hydroxyacyl-CoA dehydrogenase activities%3B forms a heterotetramer with FadA%3B similar to FadI2J2 complex%3B functions in beta-oxidation of fatty acids;Dbxref=InterPro:IPR001753,InterPro:IPR006108,InterPro:IPR006176,InterPro:IPR006180,InterPro:IPR008927,InterPro:IPR012799,UniProtKB%2FTrEMBL:Q0WAP3,Genbank:YP_002348645.1,GeneID:1176601;gbkey=CDS;gene=fadB;product=multifunctional fatty acid oxidation complex subunit alpha;protein_id=YP_002348645.1;transl_table=11
NC_003143.1	RefSeq	region	4229138	4229200	.	+	.	ID=id2730;Note=PS00166 Enoyl-CoA hydratase%2Fisomerase signature.;Dbxref=GeneID:1176601;gbkey=misc_feature;gene=fadB
NC_003143.1	RefSeq	region	4230299	4230373	.	+	.	ID=id2731;Note=PS00067 3-hydroxyacyl-CoA dehydrogenase signature.;Dbxref=GeneID:1176601;gbkey=misc_feature;gene=fadB
NC_003143.1	RefSeq	gene	4231024	4232187	.	+	.	ID=gene3665;Name=fadA;Dbxref=GeneID:1176602;gbkey=Gene;gene=fadA;gene_synonym=oldA;locus_tag=YPO3767
NC_003143.1	RefSeq	CDS	4231024	4232187	.	+	0	ID=cds3473;Name=YP_002348646.1;Parent=gene3665;Note=FadA%3B fatty acid oxidation complex component beta%3B functions in a heterotetramer with FadB%3B similar to FadI2J2 complex%3B functions in beta-oxidation of fatty acids;Dbxref=InterPro:IPR001412,InterPro:IPR002155,InterPro:IPR012805,UniProtKB%2FTrEMBL:Q0WAP2,Genbank:YP_002348646.1,GeneID:1176602;gbkey=CDS;gene=fadA;product=3-ketoacyl-CoA thiolase;protein_id=YP_002348646.1;transl_table=11
NC_003143.1	RefSeq	region	4231282	4231338	.	+	.	ID=id2732;Note=PS00098 Thiolases acyl-enzyme intermediate signature.;Dbxref=GeneID:1176602;gbkey=misc_feature;gene=fadA
NC_003143.1	RefSeq	region	4231705	4231737	.	+	.	ID=id2733;Note=PS00178 Aminoacyl-transfer RNA synthetases class-I signature.;Dbxref=GeneID:1176602;gbkey=misc_feature;gene=fadA
NC_003143.1	RefSeq	region	4232020	4232070	.	+	.	ID=id2734;Note=PS00737 Thiolases signature 2.;Dbxref=GeneID:1176602;gbkey=misc_feature;gene=fadA
NC_003143.1	RefSeq	region	4232125	4232166	.	+	.	ID=id2735;Note=PS00099 Thiolases active site.;Dbxref=GeneID:1176602;gbkey=misc_feature;gene=fadA
NC_003143.1	RefSeq	gene	4232347	4233048	.	-	.	ID=gene3666;Name=fre;Dbxref=GeneID:1176603;gbkey=Gene;gene=fre;gene_synonym=flrD,fre,fsrC,ubiB;locus_tag=YPO3768
NC_003143.1	RefSeq	CDS	4232347	4233048	.	-	0	ID=cds3474;Name=YP_002348647.1;Parent=gene3666;Note=NAD%28P%29H-flavin reductase%3B catalyzes the reversible oxidation%2Freduction of NAD%28P%29 and flavine mononucleotide%3B in Salmonella and E. coli this protein also reduces aquacob%28III%29alamin to cob%28II%29alamin;Dbxref=InterPro:IPR001221,InterPro:IPR001433,InterPro:IPR008333,UniProtKB%2FTrEMBL:Q0WAP1,Genbank:YP_002348647.1,GeneID:1176603;gbkey=CDS;gene=fre;product=FMN reductase;protein_id=YP_002348647.1;transl_table=11
NC_003143.1	RefSeq	gene	4233103	4234599	.	-	.	ID=gene3667;Name=YPO3769;Dbxref=GeneID:1176604;gbkey=Gene;locus_tag=YPO3769
NC_003143.1	RefSeq	CDS	4233103	4234599	.	-	0	ID=cds3475;Name=YP_002348648.1;Parent=gene3667;Note=catalyzes the decarboxylation of 3-octaprenyl-4-hydroxy benzoate to 2-octaprenylphenol;Dbxref=InterPro:IPR002830,UniProtKB%2FTrEMBL:Q0WAP0,Genbank:YP_002348648.1,GeneID:1176604;gbkey=CDS;product=3-octaprenyl-4-hydroxybenzoate carboxy-lyase;protein_id=YP_002348648.1;transl_table=11
NC_003143.1	RefSeq	gene	4234847	4235335	.	+	.	ID=gene3668;Name=rfaH;Dbxref=GeneID:1176605;gbkey=Gene;gene=rfaH;gene_synonym=sfrB;locus_tag=YPO3770
NC_003143.1	RefSeq	CDS	4234847	4235335	.	+	0	ID=cds3476;Name=YP_002348649.1;Parent=gene3668;Dbxref=InterPro:IPR001062,InterPro:IPR006645,InterPro:IPR006646,InterPro:IPR008991,InterPro:IPR010215,UniProtKB%2FTrEMBL:Q7CKU6,Genbank:YP_002348649.1,GeneID:1176605;gbkey=CDS;gene=rfaH;product=transcriptional activator RfaH;protein_id=YP_002348649.1;transl_table=11
NC_003143.1	RefSeq	gene	4235445	4236467	.	-	.	ID=gene3669;Name=hemB;Dbxref=GeneID:1176606;gbkey=Gene;gene=hemB;gene_synonym=ncf;locus_tag=YPO3771
NC_003143.1	RefSeq	CDS	4235445	4236467	.	-	0	ID=cds3477;Name=YP_002348650.1;Parent=gene3669;Note=catalyzes the formation of porphobilinogen from 5-aminolevulinate;Dbxref=InterPro:IPR001731,UniProtKB%2FTrEMBL:Q7CKU7,Genbank:YP_002348650.1,GeneID:1176606;gbkey=CDS;gene=hemB;product=delta-aminolevulinic acid dehydratase;protein_id=YP_002348650.1;transl_table=11
NC_003143.1	RefSeq	region	4235676	4235714	.	-	.	ID=id2736;Note=PS00169 Delta-aminolevulinic acid dehydratase active site.;Dbxref=GeneID:1176606;gbkey=misc_feature;gene=hemB
NC_003143.1	RefSeq	region	4238744	4239223	.	-	.	ID=id2737;Note=This CDS is disrupted by the insertion of IS100. The full length CDS is similar to Escherichia coli deoxyribonuclease TatD or MttC or B3840%2FB3841 SW:TATD_ECOLI %28P27859%29 %28264 aa%29 fasta scores: E%28%29: 0%2C 66.1%25 id in 257 aa;Dbxref=PSEUDO:CAL22359.1;gbkey=misc_feature;part=1%2F2;pseudo=true
NC_003143.1	RefSeq	region	4236482	4236784	.	-	.	ID=id2737;Note=This CDS is disrupted by the insertion of IS100. The full length CDS is similar to Escherichia coli deoxyribonuclease TatD or MttC or B3840%2FB3841 SW:TATD_ECOLI %28P27859%29 %28264 aa%29 fasta scores: E%28%29: 0%2C 66.1%25 id in 257 aa;Dbxref=PSEUDO:CAL22359.1;gbkey=misc_feature;part=2%2F2;pseudo=true
NC_003143.1	RefSeq	region	4236647	4236697	.	-	.	ID=id2738;Note=PS01091 Uncharacterized protein family UPF0006 signature 3.;gbkey=misc_feature
NC_003143.1	RefSeq	region	4236773	4236793	.	-	.	ID=id2739;Note=PS00387 Inorganic pyrophosphatase signature.;gbkey=misc_feature
NC_003143.1	RefSeq	region	4236785	4236792	.	-	.	ID=id2740;Note=Sequence duplication around IS insertion;gbkey=misc_feature
NC_003143.1	RefSeq	repeat_region	4236790	4238743	.	-	.	ID=id2741;Note=insertion sequence:IS100;gbkey=repeat_region
NC_003143.1	RefSeq	repeat_region	4236790	4236817	.	+	.	ID=id2742;Note=IS100 inverted repeat;gbkey=repeat_region
NC_003143.1	RefSeq	gene	4236856	4237638	.	-	.	ID=gene3670;Name=YPO3773;Note=ypmt1.57c;Dbxref=GeneID:1176608;gbkey=Gene;locus_tag=YPO3773
NC_003143.1	RefSeq	CDS	4236856	4237638	.	-	0	ID=cds3478;Name=YP_002348651.1;Parent=gene3670;Dbxref=InterPro:IPR001270,InterPro:IPR002611,InterPro:IPR003593,UniProtKB%2FTrEMBL:Q7ARK4,Genbank:YP_002348651.1,GeneID:1176608;gbkey=CDS;product=transposase%2FIS protein;protein_id=YP_002348651.1;transl_table=11
NC_003143.1	RefSeq	region	4237288	4237311	.	-	.	ID=id2743;Note=PS00017 ATP%2FGTP-binding site motif A %28P-loop%29.;Dbxref=GeneID:1176608;gbkey=misc_feature
NC_003143.1	RefSeq	gene	4237635	4238657	.	-	.	ID=gene3671;Name=y1093;Dbxref=GeneID:1176609;gbkey=Gene;gene=y1093;gene_synonym=ypmt1;locus_tag=YPO3774
NC_003143.1	RefSeq	CDS	4237635	4238657	.	-	0	ID=cds3479;Name=YP_002348652.1;Parent=gene3671;Dbxref=InterPro:IPR001584,InterPro:IPR006120,InterPro:IPR009057,InterPro:IPR012287,InterPro:IPR012337,UniProtKB%2FTrEMBL:Q7ARN5,Genbank:YP_002348652.1,GeneID:1176609;gbkey=CDS;gene=y1093;product=transposase for insertion sequence IS100;protein_id=YP_002348652.1;transl_table=11
NC_003143.1	RefSeq	region	4238541	4238606	.	-	.	ID=id2744;Note=Predicted helix-turn-helix motif with score 2147 %28%2B6.50 SD%29 at aa 18-39%2C sequence MSSRAIARELGISRNTVKRYLQ;Dbxref=GeneID:1176609;gbkey=misc_feature;gene=y1093
NC_003143.1	RefSeq	repeat_region	4238716	4238743	.	-	.	ID=id2745;Note=IS100 inverted repeat;gbkey=repeat_region
NC_003143.1	RefSeq	region	4238744	4238751	.	-	.	ID=id2746;Note=Sequence duplication around IS insertion;gbkey=misc_feature
NC_003143.1	RefSeq	region	4238822	4238854	.	-	.	ID=id2747;Note=PS01090 Uncharacterized protein family UPF0006 signature 2.;gbkey=misc_feature
NC_003143.1	RefSeq	gene	4239279	4240055	.	-	.	ID=gene3672;Name=tatC;Dbxref=GeneID:1176610;gbkey=Gene;gene=tatC;locus_tag=YPO3776
NC_003143.1	RefSeq	CDS	4239279	4240055	.	-	0	ID=cds3480;Name=YP_002348653.1;Parent=gene3672;Note=with TatABE forms the twin-arginine translocation complex which is involved in the transport of proteins across the cytoplasmic membrane;Dbxref=InterPro:IPR002033,UniProtKB%2FTrEMBL:Q7CKV0,Genbank:YP_002348653.1,GeneID:1176610;gbkey=CDS;gene=tatC;product=twin-arginine protein translocation system subunit TatC;protein_id=YP_002348653.1;transl_table=11
NC_003143.1	RefSeq	region	4239537	4239596	.	-	.	ID=id2748;Note=PS01218 Uncharacterized protein family UPF0032 signature.;Dbxref=GeneID:1176610;gbkey=misc_feature;gene=tatC
NC_003143.1	RefSeq	gene	4240058	4240720	.	-	.	ID=gene3673;Name=mtta2;Dbxref=GeneID:1176611;gbkey=Gene;gene=mtta2;gene_synonym=tatB;locus_tag=YPO3777
NC_003143.1	RefSeq	CDS	4240058	4240720	.	-	0	ID=cds3481;Name=YP_002348654.1;Parent=gene3673;Dbxref=InterPro:IPR003998,UniProtKB%2FTrEMBL:Q0WAN4,Genbank:YP_002348654.1,GeneID:1176611;gbkey=CDS;gene=mtta2;product=Sec-independent protein translocase protein TatB;protein_id=YP_002348654.1;transl_table=11
NC_003143.1	RefSeq	gene	4240724	4240990	.	-	.	ID=gene3674;Name=mtta1;Dbxref=GeneID:1176612;gbkey=Gene;gene=mtta1;gene_synonym=mtta1,tatA;locus_tag=YPO3778
NC_003143.1	RefSeq	CDS	4240724	4240990	.	-	0	ID=cds3482;Name=YP_002348655.1;Parent=gene3674;Dbxref=InterPro:IPR003369,InterPro:IPR006312,UniProtKB%2FTrEMBL:Q0WAN3,Genbank:YP_002348655.1,GeneID:1176612;gbkey=CDS;gene=mtta1;product=Sec-independent protein translocase protein TatA;protein_id=YP_002348655.1;transl_table=11
NC_003143.1	RefSeq	region	4240928	4240978	.	-	.	ID=id2749;Note=1 probable transmembrane helix predicted;Dbxref=GeneID:1176612;gbkey=misc_feature;gene=mtta1
NC_003143.1	RefSeq	gene	4241170	4242801	.	-	.	ID=gene3675;Name=ubiB;Dbxref=GeneID:1176613;gbkey=Gene;gene=ubiB;locus_tag=YPO3779
NC_003143.1	RefSeq	CDS	4241170	4242801	.	-	0	ID=cds3483;Name=YP_002348656.1;Parent=gene3675;Note=an Escherichia coli mutant results in accumulation of octaprenylphenol and no ubiquinone%3B functions in the formation of 2-octaprenyl-6-hydroxy-phenol from 2-octaprenylphenol in ubiquinone %28coenzyme Q%29 biosynthesis%3B similar to eukaryotic proteins that exhibit kinase functions;Dbxref=InterPro:IPR004147,InterPro:IPR010232,InterPro:IPR011009,UniProtKB%2FTrEMBL:Q0WAN2,Genbank:YP_002348656.1,GeneID:1176613;gbkey=CDS;gene=ubiB;product=ubiquinone biosynthesis protein UbiB;protein_id=YP_002348656.1;transl_table=11
NC_003143.1	RefSeq	region	4241185	4241250	.	-	.	ID=id2750;Note=1 probable transmembrane helix predicted;Dbxref=GeneID:1176613;gbkey=misc_feature;gene=ubiB
NC_003143.1	RefSeq	gene	4242801	4243433	.	-	.	ID=gene3676;Name=ubiB;Dbxref=GeneID:1176614;gbkey=Gene;gene=ubiB;locus_tag=YPO3780
NC_003143.1	RefSeq	CDS	4242801	4243433	.	-	0	ID=cds3484;Name=YP_002348657.1;Parent=gene3676;Dbxref=InterPro:IPR010668,UniProtKB%2FTrEMBL:Q0WAN1,Genbank:YP_002348657.1,GeneID:1176614;gbkey=CDS;product=hypothetical protein;protein_id=YP_002348657.1;transl_table=11
NC_003143.1	RefSeq	gene	4243465	4244220	.	-	.	ID=gene3677;Name=ubiE;Dbxref=GeneID:1176615;gbkey=Gene;gene=ubiE;locus_tag=YPO3781
NC_003143.1	RefSeq	CDS	4243465	4244220	.	-	0	ID=cds3485;Name=YP_002348658.1;Parent=gene3677;Note=Catalyzes the carbon methylation reaction in the biosynthesis of ubiquinone;Dbxref=InterPro:IPR004033,UniProtKB%2FTrEMBL:Q0WAN0,Genbank:YP_002348658.1,GeneID:1176615;gbkey=CDS;gene=ubiE;product=ubiquinone%2Fmenaquinone biosynthesis methyltransferase;protein_id=YP_002348658.1;transl_table=11
NC_003143.1	RefSeq	region	4243705	4243749	.	-	.	ID=id2751;Note=PS01184 ubiE%2FCOQ5 methyltransferase family signature 2.;Dbxref=GeneID:1176615;gbkey=misc_feature;gene=ubiE
NC_003143.1	RefSeq	region	4244068	4244115	.	-	.	ID=id2752;Note=PS01183 ubiE%2FCOQ5 methyltransferase family signature 1.;Dbxref=GeneID:1176615;gbkey=misc_feature;gene=ubiE
NC_003143.1	RefSeq	gene	4244312	4245745	.	-	.	ID=gene3678;Name=rumC;Dbxref=GeneID:1176616;gbkey=Gene;gene=rumC;locus_tag=YPO3782
NC_003143.1	RefSeq	CDS	4244312	4245745	.	-	0	ID=cds3486;Name=YP_002348659.1;Parent=gene3678;Dbxref=InterPro:IPR003798,UniProtKB%2FTrEMBL:Q0WAM9,Genbank:YP_002348659.1,GeneID:1176616;gbkey=CDS;gene=rumC;product=DNA recombination protein;protein_id=YP_002348659.1;transl_table=11
NC_003143.1	RefSeq	region	4244591	4244656	.	-	.	ID=id2753;Note=Predicted helix-turn-helix motif with score 998 %28%2B2.59 SD%29 at aa 388-409%2C sequence RTITNLWRYEHQSQNAQRIAER;Dbxref=GeneID:1176616;gbkey=misc_feature;gene=rumC
NC_003143.1	RefSeq	gene	4246025	4246555	.	-	.	ID=gene3679;Name=YPO3783;Dbxref=GeneID:1176617;gbkey=Gene;locus_tag=YPO3783
NC_003143.1	RefSeq	CDS	4246025	4246555	.	-	0	ID=cds3487;Name=YP_002348660.1;Parent=gene3679;Dbxref=UniProtKB%2FTrEMBL:Q0WAM8,Genbank:YP_002348660.1,GeneID:1176617;gbkey=CDS;product=hypothetical protein;protein_id=YP_002348660.1;transl_table=11
NC_003143.1	RefSeq	gene	4246827	4248644	.	-	.	ID=gene3680;Name=YPO3784;Dbxref=GeneID:1176618;gbkey=Gene;locus_tag=YPO3784
NC_003143.1	RefSeq	CDS	4246827	4248644	.	-	0	ID=cds3488;Name=YP_002348661.1;Parent=gene3680;Dbxref=InterPro:IPR003706,UniProtKB%2FTrEMBL:Q7CKV1,Genbank:YP_002348661.1,GeneID:1176618;gbkey=CDS;product=carbon starvation protein;protein_id=YP_002348661.1;transl_table=11
NC_003143.1	RefSeq	gene	4249002	4249832	.	-	.	ID=gene3681;Name=YPO3785;Dbxref=GeneID:1176619;gbkey=Gene;locus_tag=YPO3785
NC_003143.1	RefSeq	CDS	4249002	4249832	.	-	0	ID=cds3489;Name=YP_002348662.1;Parent=gene3681;Dbxref=UniProtKB%2FTrEMBL:Q7CKV2,Genbank:YP_002348662.1,GeneID:1176619;gbkey=CDS;product=hypothetical protein;protein_id=YP_002348662.1;transl_table=11
NC_003143.1	RefSeq	gene	4249953	4250714	.	-	.	ID=gene3682;Name=udp;Dbxref=GeneID:1176620;gbkey=Gene;gene=udp;locus_tag=YPO3786
NC_003143.1	RefSeq	CDS	4249953	4250714	.	-	0	ID=cds3490;Name=YP_002348663.1;Parent=gene3682;Note=catalyzes the reversible phosphorylytic cleavage of uridine and deoxyuridine to uracil and ribose- or deoxyribose-1-phosphate%3B involved in the pyrimidine salvage pathway;Dbxref=InterPro:IPR000845,InterPro:IPR010058,UniProtKB%2FTrEMBL:Q0WAM5,Genbank:YP_002348663.1,GeneID:1176620;gbkey=CDS;gene=udp;product=uridine phosphorylase;protein_id=YP_002348663.1;transl_table=11
NC_003143.1	RefSeq	region	4250472	4250519	.	-	.	ID=id2754;Note=PS01232 Purine and other phosphorylases family 1 signature.;Dbxref=GeneID:1176620;gbkey=misc_feature;gene=udp
NC_003143.1	RefSeq	gene	4251211	4252014	.	+	.	ID=gene3683;Name=YPO3787;Dbxref=GeneID:1176621;gbkey=Gene;locus_tag=YPO3787
NC_003143.1	RefSeq	CDS	4251211	4252014	.	+	0	ID=cds3491;Name=YP_002348664.1;Parent=gene3683;Dbxref=InterPro:IPR002925,UniProtKB%2FTrEMBL:Q0WAM4,Genbank:YP_002348664.1,GeneID:1176621;gbkey=CDS;product=carboxymethylenebutenolidase;protein_id=YP_002348664.1;transl_table=11
NC_003143.1	RefSeq	gene	4252069	4254345	.	-	.	ID=gene3684;Name=metE;Dbxref=GeneID:1176622;gbkey=Gene;gene=metE;locus_tag=YPO3788
NC_003143.1	RefSeq	CDS	4252069	4254345	.	-	0	ID=cds3492;Name=YP_002348665.1;Parent=gene3684;Note=catalyzes the transfer of a methyl group from 5-methyltetrahydrofolate to homocysteine to form methionine;Dbxref=InterPro:IPR002629,InterPro:IPR006276,InterPro:IPR011060,InterPro:IPR011254,InterPro:IPR013215,UniProtKB%2FTrEMBL:Q0WAM3,Genbank:YP_002348665.1,GeneID:1176622;gbkey=CDS;gene=metE;product=5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase;protein_id=YP_002348665.1;transl_table=11
NC_003143.1	RefSeq	gene	4254451	4255404	.	+	.	ID=gene3685;Name=metR;Dbxref=GeneID:1176623;gbkey=Gene;gene=metR;locus_tag=YPO3789
NC_003143.1	RefSeq	CDS	4254451	4255404	.	+	0	ID=cds3493;Name=YP_002348666.1;Parent=gene3685;Dbxref=InterPro:IPR000847,InterPro:IPR005119,UniProtKB%2FTrEMBL:Q7CKV3,Genbank:YP_002348666.1,GeneID:1176623;gbkey=CDS;gene=metR;product=LysR family transcriptional regulator;protein_id=YP_002348666.1;transl_table=11
NC_003143.1	RefSeq	region	4254499	4254564	.	+	.	ID=id2755;Note=Predicted helix-turn-helix motif with score 1683 %28%2B4.92 SD%29 at aa 17-38%2C sequence GSLAAAATQLHQTQSALSHQFS;Dbxref=GeneID:1176623;gbkey=misc_feature;gene=metR
NC_003143.1	RefSeq	region	4254502	4254594	.	+	.	ID=id2756;Note=PS00044 Bacterial regulatory proteins%2C lysR family signature.;Dbxref=GeneID:1176623;gbkey=misc_feature;gene=metR
NC_003143.1	RefSeq	gene	4255292	4256191	.	-	.	ID=gene3686;Name=yigM;Dbxref=GeneID:1176624;gbkey=Gene;gene=yigM;locus_tag=YPO3790
NC_003143.1	RefSeq	CDS	4255292	4256191	.	-	0	ID=cds3494;Name=YP_002348667.1;Parent=gene3686;Dbxref=InterPro:IPR000620,InterPro:IPR004779,UniProtKB%2FTrEMBL:Q0WAM1,Genbank:YP_002348667.1,GeneID:1176624;gbkey=CDS;gene=yigM;product=hypothetical protein;protein_id=YP_002348667.1;transl_table=11
NC_003143.1	RefSeq	gene	4256573	4257499	.	-	.	ID=gene3687;Name=YPO3791;Dbxref=GeneID:1176625;gbkey=Gene;locus_tag=YPO3791
NC_003143.1	RefSeq	CDS	4256573	4257499	.	-	0	ID=cds3495;Name=YP_002348668.1;Parent=gene3687;Dbxref=InterPro:IPR004776,UniProtKB%2FTrEMBL:Q0WAM0,Genbank:YP_002348668.1,GeneID:1176625;gbkey=CDS;product=hypothetical protein;protein_id=YP_002348668.1;transl_table=11
NC_003143.1	RefSeq	gene	4257600	4258349	.	-	.	ID=gene3688;Name=ugpQ;Dbxref=GeneID:1176626;gbkey=Gene;gene=ugpQ;locus_tag=YPO3792
NC_003143.1	RefSeq	CDS	4257600	4258349	.	-	0	ID=cds3496;Name=YP_002348669.1;Parent=gene3688;Note=hydrolyzes diesters during transport at the inner face of the cytoplasmic membrane to glycerol-3-phosphate and alcohol%3B induced when cells are starved for inorganic phosphate;Dbxref=InterPro:IPR004129,UniProtKB%2FTrEMBL:Q7CKV4,Genbank:YP_002348669.1,GeneID:1176626;gbkey=CDS;gene=ugpQ;product=cytoplasmic glycerophosphodiester phosphodiesterase;protein_id=YP_002348669.1;transl_table=11
NC_003143.1	RefSeq	gene	4258346	4259419	.	-	.	ID=gene3689;Name=ugpC;Dbxref=GeneID:1176627;gbkey=Gene;gene=ugpC;locus_tag=YPO3793
NC_003143.1	RefSeq	CDS	4258346	4259419	.	-	0	ID=cds3497;Name=YP_002348670.1;Parent=gene3689;Note=part of the UgpABCE glycerol-3-phosphate uptake system;Dbxref=InterPro:IPR003439,InterPro:IPR003593,InterPro:IPR008995,InterPro:IPR013611,UniProtKB%2FTrEMBL:Q74R28,Genbank:YP_002348670.1,GeneID:1176627;gbkey=CDS;gene=ugpC;product=glycerol-3-phosphate transporter ATP-binding protein;protein_id=YP_002348670.1;transl_table=11
NC_003143.1	RefSeq	region	4258973	4259017	.	-	.	ID=id2757;Note=PS00211 ABC transporters family signature.;Dbxref=GeneID:1176627;gbkey=misc_feature;gene=ugpC
NC_003143.1	RefSeq	region	4259288	4259311	.	-	.	ID=id2758;Note=PS00017 ATP%2FGTP-binding site motif A %28P-loop%29.;Dbxref=GeneID:1176627;gbkey=misc_feature;gene=ugpC
NC_003143.1	RefSeq	gene	4259426	4260271	.	-	.	ID=gene3690;Name=ugpE;Dbxref=GeneID:1176628;gbkey=Gene;gene=ugpE;locus_tag=YPO3794
NC_003143.1	RefSeq	CDS	4259426	4260271	.	-	0	ID=cds3498;Name=YP_002348671.1;Parent=gene3690;Note=with UgpABC is involved in uptake of glycerol-3-phosphate;Dbxref=InterPro:IPR000515,UniProtKB%2FTrEMBL:Q7CKV5,Genbank:YP_002348671.1,GeneID:1176628;gbkey=CDS;gene=ugpE;product=glycerol-3-phosphate transporter membrane protein;protein_id=YP_002348671.1;transl_table=11
NC_003143.1	RefSeq	region	4259690	4259776	.	-	.	ID=id2759;Note=PS00402 Binding-protein-dependent transport systems inner membrane comp. sign.;Dbxref=GeneID:1176628;gbkey=misc_feature;gene=ugpE
NC_003143.1	RefSeq	gene	4260268	4261155	.	-	.	ID=gene3691;Name=ugpA;Dbxref=GeneID:1176629;gbkey=Gene;gene=ugpA;locus_tag=YPO3795
NC_003143.1	RefSeq	CDS	4260268	4261155	.	-	0	ID=cds3499;Name=YP_002348672.1;Parent=gene3691;Note=with UgpEC is involved in the uptake of glycerol-3-phosphate;Dbxref=InterPro:IPR000515,UniProtKB%2FTrEMBL:Q7CKV6,Genbank:YP_002348672.1,GeneID:1176629;gbkey=CDS;gene=ugpA;product=glycerol-3-phosphate transporter permease;protein_id=YP_002348672.1;transl_table=11
NC_003143.1	RefSeq	region	4260529	4260615	.	-	.	ID=id2760;Note=PS00402 Binding-protein-dependent transport systems inner membrane comp. sign.;Dbxref=GeneID:1176629;gbkey=misc_feature;gene=ugpA
NC_003143.1	RefSeq	gene	4261453	4262772	.	-	.	ID=gene3692;Name=ugpB;Dbxref=GeneID:1176630;gbkey=Gene;gene=ugpB;locus_tag=YPO3796
NC_003143.1	RefSeq	CDS	4261453	4262772	.	-	0	ID=cds3500;Name=YP_002348673.1;Parent=gene3692;Note=with UgpACE is involved in the uptake of glycerol-3-phosphate;Dbxref=InterPro:IPR006059,InterPro:IPR006061,UniProtKB%2FTrEMBL:Q7CKV7,Genbank:YP_002348673.1,GeneID:1176630;gbkey=CDS;gene=ugpB;product=glycerol-3-phosphate transporter substrate-binding protein;protein_id=YP_002348673.1;transl_table=11
NC_003143.1	RefSeq	region	4262296	4262349	.	-	.	ID=id2761;Note=PS01037 Bacterial extracellular solute-binding proteins%2C family 1 signature.;Dbxref=GeneID:1176630;gbkey=misc_feature;gene=ugpB
NC_003143.1	RefSeq	gene	4263327	4263818	.	+	.	ID=gene3693;Name=YPO3797;Dbxref=GeneID:1176631;gbkey=Gene;locus_tag=YPO3797
NC_003143.1	RefSeq	CDS	4263327	4263818	.	+	0	ID=cds3501;Name=YP_002348674.1;Parent=gene3693;Dbxref=UniProtKB%2FTrEMBL:Q7CKV8,Genbank:YP_002348674.1,GeneID:1176631;gbkey=CDS;product=hypothetical protein;protein_id=YP_002348674.1;transl_table=11
NC_003143.1	RefSeq	gene	4264085	4266418	.	+	.	ID=gene3694;Name=YPO3798;Dbxref=GeneID:1176632;gbkey=Gene;locus_tag=YPO3798
NC_003143.1	RefSeq	CDS	4264085	4266418	.	+	0	ID=cds3502;Name=YP_002348675.1;Parent=gene3694;Dbxref=UniProtKB%2FTrEMBL:Q0WAL3,Genbank:YP_002348675.1,GeneID:1176632;gbkey=CDS;product=hypothetical protein;protein_id=YP_002348675.1;transl_table=11
NC_003143.1	RefSeq	region	4264574	4264597	.	+	.	ID=id2762;Note=PS00030 Eukaryotic  RNA-binding region RNP-1 signature.;Dbxref=GeneID:1176632;gbkey=misc_feature
NC_003143.1	RefSeq	gene	4266436	4267122	.	+	.	ID=gene3695;Name=YPO3799;Dbxref=GeneID:1176633;gbkey=Gene;locus_tag=YPO3799
NC_003143.1	RefSeq	CDS	4266436	4267122	.	+	0	ID=cds3503;Name=YP_002348676.1;Parent=gene3695;Dbxref=InterPro:IPR002086,InterPro:IPR008962,UniProtKB%2FTrEMBL:Q0WAL2,Genbank:YP_002348676.1,GeneID:1176633;gbkey=CDS;product=hypothetical protein;protein_id=YP_002348676.1;transl_table=11
NC_003143.1	RefSeq	region	4266994	4267017	.	+	.	ID=id2763;Note=PS00687 Aldehyde dehydrogenases glutamic acid active site.;Dbxref=GeneID:1176633;gbkey=misc_feature
NC_003143.1	RefSeq	gene	4267094	4267741	.	+	.	ID=gene3696;Name=YPO3800;Dbxref=GeneID:1176634;gbkey=Gene;locus_tag=YPO3800
NC_003143.1	RefSeq	CDS	4267094	4267741	.	+	0	ID=cds3504;Name=YP_002348677.1;Parent=gene3696;Dbxref=UniProtKB%2FTrEMBL:Q0WAL1,Genbank:YP_002348677.1,GeneID:1176634;gbkey=CDS;product=hypothetical protein;protein_id=YP_002348677.1;transl_table=11
NC_003143.1	RefSeq	region	4267094	4267147	.	+	.	ID=id2764;Note=Predicted N-terminal signal sequence %28probabilty 0.992%29 with cleavage site between residues 18 and 19;Dbxref=GeneID:1176634;gbkey=misc_feature
NC_003143.1	RefSeq	gene	4267803	4268321	.	+	.	ID=gene3697;Name=YPO3801;Dbxref=GeneID:1176635;gbkey=Gene;locus_tag=YPO3801
NC_003143.1	RefSeq	CDS	4267803	4268321	.	+	0	ID=cds3505;Name=YP_002348678.1;Parent=gene3697;Dbxref=UniProtKB%2FTrEMBL:Q7CKV9,Genbank:YP_002348678.1,GeneID:1176635;gbkey=CDS;product=hypothetical protein;protein_id=YP_002348678.1;transl_table=11
NC_003143.1	RefSeq	gene	4268434	4269540	.	+	.	ID=gene3698;Name=YPO3802;Dbxref=GeneID:1176636;gbkey=Gene;locus_tag=YPO3802
NC_003143.1	RefSeq	CDS	4268434	4269540	.	+	0	ID=cds3506;Name=YP_002348679.1;Parent=gene3698;Note=no significant database matches;Dbxref=UniProtKB%2FTrEMBL:Q7CKW0,Genbank:YP_002348679.1,GeneID:1176636;gbkey=CDS;product=hypothetical protein;protein_id=YP_002348679.1;transl_table=11
NC_003143.1	RefSeq	gene	4269655	4270116	.	-	.	ID=gene3699;Name=YPO3803;Dbxref=GeneID:1176637;gbkey=Gene;locus_tag=YPO3803
NC_003143.1	RefSeq	CDS	4269655	4270116	.	-	0	ID=cds3507;Name=YP_002348680.1;Parent=gene3699;Note=no significant database hits;Dbxref=UniProtKB%2FTrEMBL:Q7CKW1,Genbank:YP_002348680.1,GeneID:1176637;gbkey=CDS;product=hypothetical protein;protein_id=YP_002348680.1;transl_table=11
NC_003143.1	RefSeq	gene	4270344	4271045	.	-	.	ID=gene3700;Name=livF;Dbxref=GeneID:1176638;gbkey=Gene;gene=livF;locus_tag=YPO3804
NC_003143.1	RefSeq	CDS	4270344	4271045	.	-	0	ID=cds3508;Name=YP_002348681.1;Parent=gene3700;Note=with LivGHMJ and LivGHMK is part of the high-affinity branched-chain amino acid transport system%3B LivFGHMK is specific for the transport of leucine%2C while LivFGHMJ is a transporter for leucine%2C isoleucine%2C and valine;Dbxref=InterPro:IPR003439,InterPro:IPR003593,UniProtKB%2FTrEMBL:Q0WAK7,Genbank:YP_002348681.1,GeneID:1176638;gbkey=CDS;gene=livF;product=leucine%2Fisoleucine%2Fvaline transporter ATP-binding protein;protein_id=YP_002348681.1;transl_table=11
NC_003143.1	RefSeq	region	4270602	4270646	.	-	.	ID=id2765;Note=PS00211 ABC transporters family signature.;Dbxref=GeneID:1176638;gbkey=misc_feature;gene=livF
NC_003143.1	RefSeq	region	4270923	4270946	.	-	.	ID=id2766;Note=PS00017 ATP%2FGTP-binding site motif A %28P-loop%29.;Dbxref=GeneID:1176638;gbkey=misc_feature;gene=livF
NC_003143.1	RefSeq	gene	4271090	4271857	.	-	.	ID=gene3701;Name=livG;Dbxref=GeneID:1176639;gbkey=Gene;gene=livG;locus_tag=YPO3805
NC_003143.1	RefSeq	CDS	4271090	4271857	.	-	0	ID=cds3509;Name=YP_002348682.1;Parent=gene3701;Note=Part of the ABC transporter complexes LivFGHMJ and LivFGHMK involved in the high-affinity transport of branched-chain amino acids%3B LivFGHMK is specific for the transport of leucine%2C while LivFGHMJ is a transporter for leucine%2C isoleucine%2C and valine;Dbxref=InterPro:IPR003439,InterPro:IPR003593,UniProtKB%2FTrEMBL:Q7CKW2,Genbank:YP_002348682.1,GeneID:1176639;gbkey=CDS;gene=livG;product=leucine%2Fisoleucine%2Fvaline transporter ATP-binding protein;protein_id=YP_002348682.1;transl_table=11
NC_003143.1	RefSeq	region	4271351	4271395	.	-	.	ID=id2767;Note=PS00211 ABC transporters family signature.;Dbxref=GeneID:1176639;gbkey=misc_feature;gene=livG
NC_003143.1	RefSeq	region	4271720	4271743	.	-	.	ID=id2768;Note=PS00017 ATP%2FGTP-binding site motif A %28P-loop%29.;Dbxref=GeneID:1176639;gbkey=misc_feature;gene=livG
NC_003143.1	RefSeq	gene	4271854	4273140	.	-	.	ID=gene3702;Name=livM;Dbxref=GeneID:1176640;gbkey=Gene;gene=livM;locus_tag=YPO3806
NC_003143.1	RefSeq	CDS	4271854	4273140	.	-	0	ID=cds3510;Name=YP_002348683.1;Parent=gene3702;Note=Part of the ABC transporter complex LivFGHMJ and LivFGHMK involved in the high-affinity transport of branched-chain amino acids%3B LivFGHMK is specific for the transport of leucine%2C while LivFGHMJ is a transporter for leucine%2C isoleucine%2C and valine;Dbxref=InterPro:IPR000883,InterPro:IPR001851,UniProtKB%2FTrEMBL:Q7CKW3,Genbank:YP_002348683.1,GeneID:1176640;gbkey=CDS;gene=livM;product=leucine%2Fisoleucine%2Fvaline transporter permease;protein_id=YP_002348683.1;transl_table=11
NC_003143.1	RefSeq	gene	4273137	4274063	.	-	.	ID=gene3703;Name=livH;Dbxref=GeneID:1176641;gbkey=Gene;gene=livH;locus_tag=YPO3807
NC_003143.1	RefSeq	CDS	4273137	4274063	.	-	0	ID=cds3511;Name=YP_002348684.1;Parent=gene3703;Note=LivHMGF is the membrane component of the LIV-I%2FLS branched-chain amino acid transporter;Dbxref=InterPro:IPR001851,UniProtKB%2FTrEMBL:Q7CKW4,Genbank:YP_002348684.1,GeneID:1176641;gbkey=CDS;gene=livH;product=branched-chain amino acid transporter permease LivH;protein_id=YP_002348684.1;transl_table=11
NC_003143.1	RefSeq	gene	4274244	4275359	.	-	.	ID=gene3704;Name=livJ;Dbxref=GeneID:1176642;gbkey=Gene;gene=livJ;gene_synonym=livK;locus_tag=YPO3808
NC_003143.1	RefSeq	CDS	4274244	4275359	.	-	0	ID=cds3512;Name=YP_002348685.1;Parent=gene3704;Dbxref=InterPro:IPR000709,InterPro:IPR001828,UniProtKB%2FTrEMBL:Q0WAK3,Genbank:YP_002348685.1,GeneID:1176642;gbkey=CDS;gene=livJ;product=branched-chain amino acid-binding protein;protein_id=YP_002348685.1;transl_table=11
NC_003143.1	RefSeq	gene	4275781	4276173	.	+	.	ID=gene3705;Name=yhhK;Dbxref=GeneID:1176643;gbkey=Gene;gene=yhhK;locus_tag=YPO3809
NC_003143.1	RefSeq	CDS	4275781	4276173	.	+	0	ID=cds3513;Name=YP_002348686.1;Parent=gene3705;Dbxref=InterPro:IPR000182,UniProtKB%2FTrEMBL:Q0WAK2,Genbank:YP_002348686.1,GeneID:1176643;gbkey=CDS;gene=yhhK;product=acetyltransferase;protein_id=YP_002348686.1;transl_table=11
NC_003143.1	RefSeq	repeat_region	4276311	4277021	.	-	.	ID=id2769;Note=Contains a %27G%27 at nucleotide position 315%7EIS200-like insertion sequence:IS1541;gbkey=repeat_region
NC_003143.1	RefSeq	gene	4276419	4276877	.	-	.	ID=gene3706;Name=tnp;Dbxref=GeneID:1176644;gbkey=Gene;gene=tnp;locus_tag=YPO3810
NC_003143.1	RefSeq	CDS	4276419	4276877	.	-	0	ID=cds3514;Name=YP_002348687.1;Parent=gene3706;Dbxref=InterPro:IPR002686,UniProtKB%2FTrEMBL:Q74YM6,Genbank:YP_002348687.1,GeneID:1176644;gbkey=CDS;gene=tnp;product=transposase for the IS1541 insertion element;protein_id=YP_002348687.1;transl_table=11
NC_003143.1	RefSeq	gene	4277091	4277948	.	-	.	ID=gene3707;Name=rpoH;Dbxref=GeneID:1176645;gbkey=Gene;gene=rpoH;gene_synonym=hin,htpR,rpoH;locus_tag=YPO3811
NC_003143.1	RefSeq	CDS	4277091	4277948	.	-	0	ID=cds3515;Name=YP_002348688.1;Parent=gene3707;Note=binds with the catalytic core of RNA polymerase to produce the holoenzyme%3B this sigma factor is responsible for the expression of heat shock promoters;Dbxref=InterPro:IPR000943,InterPro:IPR007627,InterPro:IPR007630,InterPro:IPR009043,InterPro:IPR012759,UniProtKB%2FTrEMBL:Q7CKW6,Genbank:YP_002348688.1,GeneID:1176645;gbkey=CDS;gene=rpoH;product=RNA polymerase factor sigma-32;protein_id=YP_002348688.1;transl_table=11
NC_003143.1	RefSeq	region	4277112	4277192	.	-	.	ID=id2770;Note=PS00716 Sigma-70 factors family signature 2.;Dbxref=GeneID:1176645;gbkey=misc_feature;gene=rpoH
NC_003143.1	RefSeq	region	4277130	4277195	.	-	.	ID=id2771;Note=Predicted helix-turn-helix motif with score 2068 %28%2B6.23 SD%29 at aa 252-273%2C sequence STLQELADQYGVSAERVRQLEK;Dbxref=GeneID:1176645;gbkey=misc_feature;gene=rpoH
NC_003143.1	RefSeq	region	4277679	4277720	.	-	.	ID=id2772;Note=PS00715 Sigma-70 factors family signature 1.;Dbxref=GeneID:1176645;gbkey=misc_feature;gene=rpoH
NC_003143.1	RefSeq	gene	4278259	4279212	.	-	.	ID=gene3708;Name=ftsX;Dbxref=GeneID:1176646;gbkey=Gene;gene=ftsX;locus_tag=YPO3812
NC_003143.1	RefSeq	CDS	4278259	4279212	.	-	0	ID=cds3516;Name=YP_002348689.1;Parent=gene3708;Note=ABC transporter%2C membrane protein;Dbxref=InterPro:IPR003838,InterPro:IPR004513,UniProtKB%2FTrEMBL:Q7CKW7,Genbank:YP_002348689.1,GeneID:1176646;gbkey=CDS;gene=ftsX;product=cell division protein FtsX;protein_id=YP_002348689.1;transl_table=11
NC_003143.1	RefSeq	gene	4279202	4279870	.	-	.	ID=gene3709;Name=ftsE;Dbxref=GeneID:1176647;gbkey=Gene;gene=ftsE;locus_tag=YPO3813
NC_003143.1	RefSeq	CDS	4279202	4279870	.	-	0	ID=cds3517;Name=YP_002348690.1;Parent=gene3709;Note=ATP-binding protein of an ATP-binding cassette transporter%3B when bound to FtsX%2C FtsEX localizes to the cell division site and plays a role in the assembly or stability of the septal ring under low-salt growth conditions;Dbxref=InterPro:IPR003439,InterPro:IPR003593,InterPro:IPR005286,InterPro:IPR013505,UniProtKB%2FTrEMBL:Q7CKW8,Genbank:YP_002348690.1,GeneID:1176647;gbkey=CDS;gene=ftsE;product=cell division protein FtsE;protein_id=YP_002348690.1;transl_table=11
NC_003143.1	RefSeq	region	4279415	4279459	.	-	.	ID=id2773;Note=PS00211 ABC transporters family signature.;Dbxref=GeneID:1176647;gbkey=misc_feature;gene=ftsE
NC_003143.1	RefSeq	region	4279745	4279768	.	-	.	ID=id2774;Note=PS00017 ATP%2FGTP-binding site motif A %28P-loop%29.;Dbxref=GeneID:1176647;gbkey=misc_feature;gene=ftsE
NC_003143.1	RefSeq	gene	4279876	4281501	.	-	.	ID=gene3710;Name=ftsY;Dbxref=GeneID:1176648;gbkey=Gene;gene=ftsY;locus_tag=YPO3814
NC_003143.1	RefSeq	CDS	4279876	4281501	.	-	0	ID=cds3518;Name=YP_002348691.1;Parent=gene3710;Dbxref=InterPro:IPR000897,InterPro:IPR003593,InterPro:IPR004390,InterPro:IPR013822,UniProtKB%2FTrEMBL:Q0WAJ7,Genbank:YP_002348691.1,GeneID:1176648;gbkey=CDS;gene=ftsY;product=cell division protein;protein_id=YP_002348691.1;transl_table=11
NC_003143.1	RefSeq	region	4279930	4279971	.	-	.	ID=id2775;Note=PS00300 SRP54-type proteins GTP-binding domain signature.;Dbxref=GeneID:1176648;gbkey=misc_feature;gene=ftsY
NC_003143.1	RefSeq	region	4280449	4280472	.	-	.	ID=id2776;Note=PS00017 ATP%2FGTP-binding site motif A %28P-loop%29.;Dbxref=GeneID:1176648;gbkey=misc_feature;gene=ftsY
NC_003143.1	RefSeq	gene	4281530	4281673	.	+	.	ID=gene3711;Name=YPO3815;Dbxref=GeneID:1176649;gbkey=Gene;locus_tag=YPO3815
NC_003143.1	RefSeq	CDS	4281530	4281673	.	+	0	ID=cds3519;Name=YP_002348692.1;Parent=gene3711;Note=no significant database hits;Dbxref=UniProtKB%2FTrEMBL:Q74R50,Genbank:YP_002348692.1,GeneID:1176649;gbkey=CDS;product=hypothetical protein;protein_id=YP_002348692.1;transl_table=11
NC_003143.1	RefSeq	gene	4281783	4282445	.	+	.	ID=gene3712;Name=rsmD;Dbxref=GeneID:1176650;gbkey=Gene;gene=rsmD;locus_tag=YPO3816
NC_003143.1	RefSeq	CDS	4281783	4282445	.	+	0	ID=cds3520;Name=YP_002348693.1;Parent=gene3712;Note=catalyzes the methylation of 16S rRNA at position G966;Dbxref=InterPro:IPR002052,InterPro:IPR004398,UniProtKB%2FTrEMBL:Q7CKW9,Genbank:YP_002348693.1,GeneID:1176650;gbkey=CDS;gene=rsmD;product=16S rRNA m%282%29G966-methyltransferase;protein_id=YP_002348693.1;transl_table=11
NC_003143.1	RefSeq	region	4282185	4282205	.	+	.	ID=id2777;Note=PS00092 N-6 Adenine-specific DNA methylases signature.;Dbxref=GeneID:1176650;gbkey=misc_feature;gene=rsmD
NC_003143.1	RefSeq	gene	4282435	4282707	.	+	.	ID=gene3713;Name=yhhL;Dbxref=GeneID:1176651;gbkey=Gene;gene=yhhL;locus_tag=YPO3816a
NC_003143.1	RefSeq	CDS	4282435	4282707	.	+	0	ID=cds3521;Name=YP_002348694.1;Parent=gene3713;Dbxref=InterPro:IPR009525,UniProtKB%2FTrEMBL:Q7CKX0,Genbank:YP_002348694.1,GeneID:1176651;gbkey=CDS;gene=yhhL;product=hypothetical protein;protein_id=YP_002348694.1;transl_table=11
NC_003143.1	RefSeq	gene	4282894	4283313	.	-	.	ID=gene3714;Name=YPO3817;Dbxref=GeneID:1176652;gbkey=Gene;locus_tag=YPO3817
NC_003143.1	RefSeq	CDS	4282894	4283313	.	-	0	ID=cds3522;Name=YP_002348695.1;Parent=gene3714;Dbxref=UniProtKB%2FTrEMBL:Q7CKX1,Genbank:YP_002348695.1,GeneID:1176652;gbkey=CDS;product=hypothetical protein;protein_id=YP_002348695.1;transl_table=11
NC_003143.1	RefSeq	region	4283251	4283301	.	-	.	ID=id2778;Note=1 probable transmembrane helix predicted;Dbxref=GeneID:1176652;gbkey=misc_feature
NC_003143.1	RefSeq	gene	4283525	4283845	.	-	.	ID=gene3715;Name=YPO3818;Dbxref=GeneID:1176653;gbkey=Gene;locus_tag=YPO3818
NC_003143.1	RefSeq	CDS	4283525	4283845	.	-	0	ID=cds3523;Name=YP_002348696.1;Parent=gene3715;Dbxref=UniProtKB%2FTrEMBL:Q7CKX2,Genbank:YP_002348696.1,GeneID:1176653;gbkey=CDS;product=hypothetical protein;protein_id=YP_002348696.1;transl_table=11
NC_003143.1	RefSeq	gene	4284135	4284761	.	+	.	ID=gene3716;Name=yhhN;Dbxref=GeneID:1176654;gbkey=Gene;gene=yhhN;locus_tag=YPO3819
NC_003143.1	RefSeq	CDS	4284135	4284761	.	+	0	ID=cds3524;Name=YP_002348697.1;Parent=gene3716;Dbxref=InterPro:IPR012506,UniProtKB%2FTrEMBL:Q7CKX3,Genbank:YP_002348697.1,GeneID:1176654;gbkey=CDS;gene=yhhN;product=hypothetical protein;protein_id=YP_002348697.1;transl_table=11
NC_003143.1	RefSeq	gene	4285175	4287541	.	+	.	ID=gene3717;Name=zntA;Dbxref=GeneID:1176655;gbkey=Gene;gene=zntA;locus_tag=YPO3820
NC_003143.1	RefSeq	CDS	4285175	4287541	.	+	0	ID=cds3525;Name=YP_002348698.1;Parent=gene3717;Note=P-type ATPase involved in the export of lead%2C cadmium%2C zinc and mercury;Dbxref=InterPro:IPR001366,InterPro:IPR001757,InterPro:IPR001969,InterPro:IPR005834,InterPro:IPR006121,InterPro:IPR006404,InterPro:IPR006416,InterPro:IPR008250,UniProtKB%2FTrEMBL:Q74R56,Genbank:YP_002348698.1,GeneID:1176655;gbkey=CDS;gene=zntA;product=zinc%2Fcadmium%2Fmercury%2Flead-transporting ATPase;protein_id=YP_002348698.1;transl_table=11
NC_003143.1	RefSeq	region	4285436	4285525	.	+	.	ID=id2779;Note=PS01047 Heavy-metal-associated domain.;Dbxref=GeneID:1176655;gbkey=misc_feature;gene=zntA
NC_003143.1	RefSeq	region	4286594	4286614	.	+	.	ID=id2780;Note=PS00154 E1-E2 ATPases phosphorylation site.;Dbxref=GeneID:1176655;gbkey=misc_feature;gene=zntA
NC_003143.1	RefSeq	region	4287467	4287502	.	+	.	ID=id2781;Note=PS00141 Eukaryotic and viral aspartyl proteases active site.;Dbxref=GeneID:1176655;gbkey=misc_feature;gene=zntA
NC_003143.1	RefSeq	gene	4287625	4287879	.	-	.	ID=gene3718;Name=YPO3821;Dbxref=GeneID:1176656;gbkey=Gene;locus_tag=YPO3821
NC_003143.1	RefSeq	CDS	4287625	4287879	.	-	0	ID=cds3526;Name=YP_002348699.1;Parent=gene3718;Note=TusA%3B transfers sulfur to TusBCD complex%3B involved in thiouridation of U34 position of some tRNAs;Dbxref=InterPro:IPR001455,UniProtKB%2FTrEMBL:Q0WAI9,Genbank:YP_002348699.1,GeneID:1176656;gbkey=CDS;product=sulfur transfer protein SirA;protein_id=YP_002348699.1;transl_table=11
NC_003143.1	RefSeq	region	4287808	4287846	.	-	.	ID=id2782;Note=PS01148 Uncharacterized protein family UPF0033 signature.;Dbxref=GeneID:1176656;gbkey=misc_feature
NC_003143.1	RefSeq	gene	4288163	4288831	.	+	.	ID=gene3719;Name=yhhQ;Dbxref=GeneID:1176657;gbkey=Gene;gene=yhhQ;locus_tag=YPO3822
NC_003143.1	RefSeq	CDS	4288163	4288831	.	+	0	ID=cds3527;Name=YP_002348700.1;Parent=gene3719;Dbxref=InterPro:IPR003744,UniProtKB%2FTrEMBL:Q0WAI8,Genbank:YP_002348700.1,GeneID:1176657;gbkey=CDS;gene=yhhQ;product=hypothetical protein;protein_id=YP_002348700.1;transl_table=11
NC_003143.1	RefSeq	gene	4288961	4289488	.	+	.	ID=gene3720;Name=dcrB;Dbxref=GeneID:1176658;gbkey=Gene;gene=dcrB;locus_tag=YPO3823
NC_003143.1	RefSeq	CDS	4288961	4289488	.	+	0	ID=cds3528;Name=YP_002348701.1;Parent=gene3720;Dbxref=UniProtKB%2FTrEMBL:Q7CKX4,Genbank:YP_002348701.1,GeneID:1176658;gbkey=CDS;gene=dcrB;product=hypothetical protein;protein_id=YP_002348701.1;transl_table=11
NC_003143.1	RefSeq	region	4288991	4289023	.	+	.	ID=id2783;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site.;Dbxref=GeneID:1176658;gbkey=misc_feature;gene=dcrB
NC_003143.1	RefSeq	gene	4289650	4290945	.	-	.	ID=gene3721;Name=glpC;Dbxref=GeneID:1176659;gbkey=Gene;gene=glpC;locus_tag=YPO3824
NC_003143.1	RefSeq	CDS	4289650	4290945	.	-	0	ID=cds3529;Name=YP_002348702.1;Parent=gene3721;Note=anaerobic%3B with GlpAB catalyzes the conversion of glycerol-3-phosphate to dihydroxyacetone phosphate;Dbxref=InterPro:IPR001450,InterPro:IPR004017,InterPro:IPR009051,InterPro:IPR011349,InterPro:IPR012285,UniProtKB%2FTrEMBL:Q0WAI6,Genbank:YP_002348702.1,GeneID:1176659;gbkey=CDS;gene=glpC;product=sn-glycerol-3-phosphate dehydrogenase subunit C;protein_id=YP_002348702.1;transl_table=11
NC_003143.1	RefSeq	region	4290676	4290711	.	-	.	ID=id2784;Note=PS00198 4Fe-4S ferredoxins%2C iron-sulfur binding region signature.;Dbxref=GeneID:1176659;gbkey=misc_feature;gene=glpC
NC_003143.1	RefSeq	region	4290817	4290852	.	-	.	ID=id2785;Note=PS00198 4Fe-4S ferredoxins%2C iron-sulfur binding region signature.;Dbxref=GeneID:1176659;gbkey=misc_feature;gene=glpC
NC_003143.1	RefSeq	gene	4290942	4292216	.	-	.	ID=gene3722;Name=glpB;Dbxref=GeneID:1176660;gbkey=Gene;gene=glpB;locus_tag=YPO3825
NC_003143.1	RefSeq	CDS	4290942	4292216	.	-	0	ID=cds3530;Name=YP_002348703.1;Parent=gene3722;Note=sn-glycerol-3-phosphate dehydrogenase %28anaerobic%29%3B catalyzes the formation of dihydroxyacetone from glycerol 3-phosphate%3B part of GlpABC complex%3B presumably this subunit is responsible for membrane interactions and contains iron-sulfur clusters;Dbxref=InterPro:IPR003953,InterPro:IPR009158,UniProtKB%2FTrEMBL:Q0WAI5,Genbank:YP_002348703.1,GeneID:1176660;gbkey=CDS;gene=glpB;product=anaerobic glycerol-3-phosphate dehydrogenase subunit B;protein_id=YP_002348703.1;transl_table=11
NC_003143.1	RefSeq	region	4292166	4292198	.	-	.	ID=id2786;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site.;Dbxref=GeneID:1176660;gbkey=misc_feature;gene=glpB
NC_003143.1	RefSeq	gene	4292206	4293861	.	-	.	ID=gene3723;Name=glpA;Dbxref=GeneID:1176661;gbkey=Gene;gene=glpA;locus_tag=YPO3826
NC_003143.1	RefSeq	CDS	4292206	4293861	.	-	0	ID=cds3531;Name=YP_002348704.1;Parent=gene3723;Note=anaerobic%2C catalyzes the conversion of glycerol 3-phosphate to dihydroxyacetone using fumarate or nitrate as electron acceptor;Dbxref=InterPro:IPR000447,InterPro:IPR006076,InterPro:IPR007419,UniProtKB%2FTrEMBL:Q7CKX5,Genbank:YP_002348704.1,GeneID:1176661;gbkey=CDS;gene=glpA;product=sn-glycerol-3-phosphate dehydrogenase subunit A;protein_id=YP_002348704.1;transl_table=11
NC_003143.1	RefSeq	region	4292773	4292805	.	-	.	ID=id2787;Note=PS00978 FAD-dependent glycerol-3-phosphate dehydrogenase signature 2.;Dbxref=GeneID:1176661;gbkey=misc_feature;gene=glpA
NC_003143.1	RefSeq	region	4293766	4293819	.	-	.	ID=id2788;Note=PS00977 FAD-dependent glycerol-3-phosphate dehydrogenase signature 1.;Dbxref=GeneID:1176661;gbkey=misc_feature;gene=glpA
NC_003143.1	RefSeq	gene	4294486	4295601	.	+	.	ID=gene3724;Name=glpQ;Dbxref=GeneID:1176662;gbkey=Gene;gene=glpQ;locus_tag=YPO3827
NC_003143.1	RefSeq	CDS	4294486	4295601	.	+	0	ID=cds3532;Name=YP_002348705.1;Parent=gene3724;Note=hydrolyzes deacylated phospholipids to glycerol 3-phosphate and the corresponding alcohols%3B periplasmic;Dbxref=InterPro:IPR004129,UniProtKB%2FTrEMBL:Q0WAI3,Genbank:YP_002348705.1,GeneID:1176662;gbkey=CDS;gene=glpQ;product=glycerophosphodiester phosphodiesterase;protein_id=YP_002348705.1;transl_table=11
NC_003143.1	RefSeq	gene	4295675	4296727	.	-	.	ID=gene3725;Name=YPO3828;Dbxref=GeneID:1176663;gbkey=Gene;locus_tag=YPO3828
NC_003143.1	RefSeq	CDS	4295675	4296727	.	-	0	ID=cds3533;Name=YP_002348706.1;Parent=gene3725;Note=no significant database hits;Dbxref=UniProtKB%2FTrEMBL:Q0WAI2,Genbank:YP_002348706.1,GeneID:1176663;gbkey=CDS;product=hypothetical protein;protein_id=YP_002348706.1;transl_table=11
NC_003143.1	RefSeq	gene	4297143	4297952	.	-	.	ID=gene3726;Name=YPO3829;Dbxref=GeneID:1176664;gbkey=Gene;locus_tag=YPO3829
NC_003143.1	RefSeq	CDS	4297143	4297952	.	-	0	ID=cds3534;Name=YP_002348707.1;Parent=gene3726;Note=purine and pyrimidine nucleotides are secondary substrates%3B yigL expression is regulated by heat shock%2C osmotic shock and starvation of glucose%2C phosphate or ammonium;Dbxref=InterPro:IPR000150,InterPro:IPR006379,InterPro:IPR013200,UniProtKB%2FTrEMBL:Q0WAI1,Genbank:YP_002348707.1,GeneID:1176664;gbkey=CDS;product=sugar phosphatase;protein_id=YP_002348707.1;transl_table=11
NC_003143.1	RefSeq	region	4297908	4297943	.	-	.	ID=id2789;Note=PS01228 Hypothetical cof family signature 1.;Dbxref=GeneID:1176664;gbkey=misc_feature
NC_003143.1	RefSeq	gene	4297987	4299000	.	-	.	ID=gene3727;Name=pldB;Dbxref=GeneID:1176665;gbkey=Gene;gene=pldB;locus_tag=YPO3830
NC_003143.1	RefSeq	CDS	4297987	4299000	.	-	0	ID=cds3535;Name=YP_002348708.1;Parent=gene3727;Note=lecithinase B%3B catalyzes the conversion of 1-lysophosphatidylcholine to glycerophosphocholine%3B can also hydrolyze 2-acyl glycerophosphoethanolamine and other substrates;Dbxref=InterPro:IPR000073,UniProtKB%2FTrEMBL:Q7CKX6,Genbank:YP_002348708.1,GeneID:1176665;gbkey=CDS;gene=pldB;product=lysophospholipase L2;protein_id=YP_002348708.1;transl_table=11
NC_003143.1	RefSeq	gene	4299196	4299816	.	+	.	ID=gene3728;Name=rhtB;Dbxref=GeneID:1176666;gbkey=Gene;gene=rhtB;locus_tag=YPO3831
NC_003143.1	RefSeq	CDS	4299196	4299816	.	+	0	ID=cds3536;Name=YP_002348709.1;Parent=gene3728;Dbxref=InterPro:IPR001123,UniProtKB%2FTrEMBL:Q7CKX7,Genbank:YP_002348709.1,GeneID:1176666;gbkey=CDS;gene=rhtB;product=homoserine%2Fhomoserine lactone efflux protein;protein_id=YP_002348709.1;transl_table=11
NC_003143.1	RefSeq	gene	4299867	4300487	.	-	.	ID=gene3729;Name=rhtC;Dbxref=GeneID:1176667;gbkey=Gene;gene=rhtC;locus_tag=YPO3832
NC_003143.1	RefSeq	CDS	4299867	4300487	.	-	0	ID=cds3537;Name=YP_002348710.1;Parent=gene3729;Dbxref=InterPro:IPR001123,InterPro:IPR004778,UniProtKB%2FTrEMBL:Q7CKX8,Genbank:YP_002348710.1,GeneID:1176667;gbkey=CDS;gene=rhtC;product=threonine efflux system;protein_id=YP_002348710.1;transl_table=11
NC_003143.1	RefSeq	gene	4300594	4302426	.	-	.	ID=gene3730;Name=recQ;Dbxref=GeneID:1176668;gbkey=Gene;gene=recQ;locus_tag=YPO3833
NC_003143.1	RefSeq	CDS	4300594	4302426	.	-	0	ID=cds3538;Name=YP_002348711.1;Parent=gene3730;Note=functions in blocking illegitimate recombination%2C enhancing topoisomerase activity%2C initiating SOS signaling and clearing blocked replication forks%3B component of the RecF recombinational pathway;Dbxref=InterPro:IPR001650,InterPro:IPR002121,InterPro:IPR004589,InterPro:IPR006293,InterPro:IPR010997,InterPro:IPR011545,InterPro:IPR014001,InterPro:IPR014021,UniProtKB%2FTrEMBL:Q7CKX9,Genbank:YP_002348711.1,GeneID:1176668;gbkey=CDS;gene=recQ;product=ATP-dependent DNA helicase RecQ;protein_id=YP_002348711.1;transl_table=11
NC_003143.1	RefSeq	gene	4302504	4303382	.	-	.	ID=gene3731;Name=pldA;Dbxref=GeneID:1176669;gbkey=Gene;gene=pldA;locus_tag=YPO3834
NC_003143.1	RefSeq	CDS	4302504	4303382	.	-	0	ID=cds3539;Name=YP_002348712.1;Parent=gene3731;Note=catalyzes the hydrolysis of phosphatidylcholine;Dbxref=InterPro:IPR003187,UniProtKB%2FTrEMBL:Q7CKY0,Genbank:YP_002348712.1,GeneID:1176669;gbkey=CDS;gene=pldA;product=phospholipase A;protein_id=YP_002348712.1;transl_table=11
NC_003143.1	RefSeq	gene	4303604	4304074	.	+	.	ID=gene3732;Name=YPO3835;Dbxref=GeneID:1176670;gbkey=Gene;locus_tag=YPO3835
NC_003143.1	RefSeq	CDS	4303604	4304074	.	+	0	ID=cds3540;Name=YP_002348713.1;Parent=gene3732;Dbxref=InterPro:IPR003736,InterPro:IPR006683,UniProtKB%2FTrEMBL:Q7CKY1,Genbank:YP_002348713.1,GeneID:1176670;gbkey=CDS;product=hypothetical protein;protein_id=YP_002348713.1;transl_table=11
NC_003143.1	RefSeq	gene	4304161	4305051	.	+	.	ID=gene3733;Name=rarD;Dbxref=GeneID:1176671;gbkey=Gene;gene=rarD;locus_tag=YPO3836
NC_003143.1	RefSeq	CDS	4304161	4305051	.	+	0	ID=cds3541;Name=YP_002348714.1;Parent=gene3733;Dbxref=InterPro:IPR000620,InterPro:IPR004626,UniProtKB%2FTrEMBL:Q0WAH4,Genbank:YP_002348714.1,GeneID:1176671;gbkey=CDS;gene=rarD;product=hypothetical protein;protein_id=YP_002348714.1;transl_table=11
NC_003143.1	RefSeq	gene	4305149	4306099	.	-	.	ID=gene3734;Name=corA;Dbxref=GeneID:1176672;gbkey=Gene;gene=corA;locus_tag=YPO3837
NC_003143.1	RefSeq	CDS	4305149	4306099	.	-	0	ID=cds3542;Name=YP_002348715.1;Parent=gene3734;Note=responsible for the influx of magnesium ions;Dbxref=InterPro:IPR000005,InterPro:IPR002523,InterPro:IPR004488,UniProtKB%2FTrEMBL:Q0WAH3,Genbank:YP_002348715.1,GeneID:1176672;gbkey=CDS;gene=corA;product=magnesium%2Fnickel%2Fcobalt transporter CorA;protein_id=YP_002348715.1;transl_table=11
NC_003143.1	RefSeq	gene	4306748	4307590	.	-	.	ID=gene3735;Name=YPO3838;Dbxref=GeneID:1176673;gbkey=Gene;locus_tag=YPO3838
NC_003143.1	RefSeq	CDS	4306748	4307590	.	-	0	ID=cds3543;Name=YP_002348716.1;Parent=gene3735;Dbxref=InterPro:IPR009215,UniProtKB%2FTrEMBL:Q7CKY2,Genbank:YP_002348716.1,GeneID:1176673;gbkey=CDS;product=hypothetical protein;protein_id=YP_002348716.1;transl_table=11
NC_003143.1	RefSeq	gene	4307604	4308821	.	-	.	ID=gene3736;Name=YPO3839;Dbxref=GeneID:1176674;gbkey=Gene;locus_tag=YPO3839
NC_003143.1	RefSeq	CDS	4307604	4308821	.	-	0	ID=cds3544;Name=YP_002348717.1;Parent=gene3736;Dbxref=InterPro:IPR003006,InterPro:IPR008322,InterPro:IPR010647,UniProtKB%2FTrEMBL:Q0WAH1,Genbank:YP_002348717.1,GeneID:1176674;gbkey=CDS;product=hypothetical protein;protein_id=YP_002348717.1;transl_table=11
NC_003143.1	RefSeq	gene	4309249	4309935	.	+	.	ID=gene3737;Name=YPO3840;Dbxref=GeneID:1176675;gbkey=Gene;locus_tag=YPO3840
NC_003143.1	RefSeq	CDS	4309249	4309935	.	+	0	ID=cds3545;Name=YP_002348718.1;Parent=gene3737;Dbxref=InterPro:IPR001647,InterPro:IPR009057,InterPro:IPR012287,UniProtKB%2FTrEMBL:Q7CKY3,Genbank:YP_002348718.1,GeneID:1176675;gbkey=CDS;product=TetR family regulatory protein;protein_id=YP_002348718.1;transl_table=11
NC_003143.1	RefSeq	region	4309363	4309428	.	+	.	ID=id2790;Note=Predicted helix-turn-helix motif with score 1509 %28%2B4.33 SD%29 at aa 39-60%2C sequence PSITEVASAAQLSRATAYRYFP;Dbxref=GeneID:1176675;gbkey=misc_feature
NC_003143.1	RefSeq	gene	4310049	4312211	.	-	.	ID=gene3738;Name=uvrD;Dbxref=GeneID:1176676;gbkey=Gene;gene=uvrD;gene_synonym=pdeB,rad,recL,uvrD;locus_tag=YPO3841
NC_003143.1	RefSeq	CDS	4310049	4312211	.	-	0	ID=cds3546;Name=YP_002348719.1;Parent=gene3738;Note=unwinds DNA duplexes with 3%27 to 5%27 polarity with respect to the bound strand and initiates unwinding most effectively when a single-stranded region is present%3B involved in the post-incision events of nucleotide excision repair and methyl-directed mismatch repair.;Dbxref=InterPro:IPR000212,InterPro:IPR005753,InterPro:IPR014016,InterPro:IPR014017,UniProtKB%2FTrEMBL:Q0WAG9,Genbank:YP_002348719.1,GeneID:1176676;gbkey=CDS;gene=uvrD;product=DNA-dependent helicase II;protein_id=YP_002348719.1;transl_table=11
NC_003143.1	RefSeq	region	4312104	4312127	.	-	.	ID=id2791;Note=PS00017 ATP%2FGTP-binding site motif A %28P-loop%29.;Dbxref=GeneID:1176676;gbkey=misc_feature;gene=uvrD
NC_003143.1	RefSeq	gene	4312313	4313029	.	-	.	ID=gene3739;Name=YPO3842;Dbxref=GeneID:1176677;gbkey=Gene;locus_tag=YPO3842
NC_003143.1	RefSeq	CDS	4312313	4313029	.	-	0	ID=cds3547;Name=YP_002348720.1;Parent=gene3739;Note=YigB%3B member of the haloacid dehalogenase %28HAD%29-like hydrolases superfamily of protein%3B unknown function;Dbxref=InterPro:IPR005834,InterPro:IPR006439,UniProtKB%2FTrEMBL:Q7CKY4,Genbank:YP_002348720.1,GeneID:1176677;gbkey=CDS;product=flavin mononucleotide phosphatase;protein_id=YP_002348720.1;transl_table=11
NC_003143.1	RefSeq	gene	4313029	4313940	.	-	.	ID=gene3740;Name=xerC;Dbxref=GeneID:1176678;gbkey=Gene;gene=xerC;locus_tag=YPO3843
NC_003143.1	RefSeq	CDS	4313029	4313940	.	-	0	ID=cds3548;Name=YP_002348721.1;Parent=gene3740;Note=site-specific tyrosine recombinase which cuts and rejoins DNA molecules%3B binds cooperatively to specific DNA consensus sites%3B forms a heterotetrameric complex with XerC%3B XerCD exhibit similar sequences%3B essential to convert chromosome dimers to monomers during cell division and functions during plasmid segregation%3B cell division protein FtsK may regulate the XerCD complex%3B enzyme from Streptococcus group has unusual active site motifs;Dbxref=InterPro:IPR002104,InterPro:IPR004107,InterPro:IPR010998,InterPro:IPR011010,InterPro:IPR011931,InterPro:IPR013762,UniProtKB%2FTrEMBL:Q0WAG7,Genbank:YP_002348721.1,GeneID:1176678;gbkey=CDS;gene=xerC;product=site-specific tyrosine recombinase XerC;protein_id=YP_002348721.1;transl_table=11
NC_003143.1	RefSeq	gene	4313937	4314641	.	-	.	ID=gene3741;Name=xerC;Dbxref=GeneID:1176679;gbkey=Gene;gene=xerC;locus_tag=YPO3844
NC_003143.1	RefSeq	CDS	4313937	4314641	.	-	0	ID=cds3549;Name=YP_002348722.1;Parent=gene3741;Dbxref=InterPro:IPR007435,UniProtKB%2FTrEMBL:Q7CKY5,Genbank:YP_002348722.1,GeneID:1176679;gbkey=CDS;product=hypothetical protein;protein_id=YP_002348722.1;transl_table=11
NC_003143.1	RefSeq	gene	4314706	4315530	.	-	.	ID=gene3742;Name=dapF;Dbxref=GeneID:1176680;gbkey=Gene;gene=dapF;locus_tag=YPO3845
NC_003143.1	RefSeq	CDS	4314706	4315530	.	-	0	ID=cds3550;Name=YP_002348723.1;Parent=gene3742;Note=involved in lysine biosynthesis%3B DAP epimerase%3B produces DL-diaminopimelate from LL-diaminopimelate;Dbxref=InterPro:IPR001653,UniProtKB%2FTrEMBL:Q0WAG5,Genbank:YP_002348723.1,GeneID:1176680;gbkey=CDS;gene=dapF;product=diaminopimelate epimerase;protein_id=YP_002348723.1;transl_table=11
NC_003143.1	RefSeq	region	4315297	4315341	.	-	.	ID=id2792;Note=PS01326 Diaminopimelate epimerase signature.;Dbxref=GeneID:1176680;gbkey=misc_feature;gene=dapF
NC_003143.1	RefSeq	gene	4315714	4315902	.	-	.	ID=gene3743;Name=YPO3846;Dbxref=GeneID:1176681;gbkey=Gene;locus_tag=YPO3846
NC_003143.1	RefSeq	CDS	4315714	4315902	.	-	0	ID=cds3551;Name=YP_002348724.1;Parent=gene3743;Dbxref=UniProtKB%2FTrEMBL:Q7CKY6,Genbank:YP_002348724.1,GeneID:1176681;gbkey=CDS;product=lipoprotein;protein_id=YP_002348724.1;transl_table=11
NC_003143.1	RefSeq	region	4315843	4315875	.	-	.	ID=id2793;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site.;Dbxref=GeneID:1176681;gbkey=misc_feature
NC_003143.1	RefSeq	gene	4316054	4316374	.	+	.	ID=gene3744;Name=cyaY;Dbxref=GeneID:1176682;gbkey=Gene;gene=cyaY;locus_tag=YPO3847
NC_003143.1	RefSeq	CDS	4316054	4316374	.	+	0	ID=cds3552;Name=YP_002348725.1;Parent=gene3744;Note=defects in the mitochondrial frataxin protein cause Friedreich ataxis which is an autosomal recessive neurodegenerative disease%3B based on phylogenomic distribution this protein may have a role in iron-sulfur cluster protein assembly;Dbxref=InterPro:IPR002908,UniProtKB%2FTrEMBL:Q0WAG3,Genbank:YP_002348725.1,GeneID:1176682;gbkey=CDS;gene=cyaY;product=frataxin-like protein;protein_id=YP_002348725.1;transl_table=11
NC_003143.1	RefSeq	gene	4316618	4319170	.	-	.	ID=gene3745;Name=cyaA;Dbxref=GeneID:1176683;gbkey=Gene;gene=cyaA;locus_tag=YPO3848
NC_003143.1	RefSeq	CDS	4316618	4319170	.	-	0	ID=cds3553;Name=YP_002348726.1;Parent=gene3745;Note=catalyzes transfer of adenylyl group of ATP from pyrophosphate to the 3%27-hydroxyl group to form cyclic AMP;Dbxref=InterPro:IPR000274,UniProtKB%2FTrEMBL:Q0WAG2,Genbank:YP_002348726.1,GeneID:1176683;gbkey=CDS;gene=cyaA;product=adenylate cyclase;protein_id=YP_002348726.1;transl_table=11
NC_003143.1	RefSeq	region	4317335	4317379	.	-	.	ID=id2794;Note=PS01093 Adenylate cyclases class-I signature 2.;Dbxref=GeneID:1176683;gbkey=misc_feature;gene=cyaA
NC_003143.1	RefSeq	region	4318412	4318447	.	-	.	ID=id2795;Note=PS01092 Adenylate cyclases class-I signature 1.;Dbxref=GeneID:1176683;gbkey=misc_feature;gene=cyaA
NC_003143.1	RefSeq	gene	4319234	4319443	.	+	.	ID=gene3746;Name=YPO3848a;Dbxref=GeneID:16744782;gbkey=Gene;locus_tag=YPO3848a
NC_003143.1	RefSeq	CDS	4319234	4319443	.	+	0	ID=cds3554;Name=YP_008479733.1;Parent=gene3746;Dbxref=Genbank:YP_008479733.1,GeneID:16744782;gbkey=CDS;product=hypothetical protein;protein_id=YP_008479733.1;transl_table=11
NC_003143.1	RefSeq	gene	4319664	4320605	.	+	.	ID=gene3747;Name=hemC;Dbxref=GeneID:1176684;gbkey=Gene;gene=hemC;gene_synonym=popE;locus_tag=YPO3849
NC_003143.1	RefSeq	CDS	4319664	4320605	.	+	0	ID=cds3555;Name=YP_002348727.1;Parent=gene3747;Note=transformation of porphobilinogen to hydroxymethylbilane in porphyrin biosynthesis;Dbxref=InterPro:IPR000860,UniProtKB%2FTrEMBL:Q0WAG1,Genbank:YP_002348727.1,GeneID:1176684;gbkey=CDS;gene=hemC;product=porphobilinogen deaminase;protein_id=YP_002348727.1;transl_table=11
NC_003143.1	RefSeq	region	4320354	4320404	.	+	.	ID=id2796;Note=PS00533 Porphobilinogen deaminase cofactor-binding site.;Dbxref=GeneID:1176684;gbkey=misc_feature;gene=hemC
NC_003143.1	RefSeq	gene	4320602	4321351	.	+	.	ID=gene3748;Name=hemD;Dbxref=GeneID:1176685;gbkey=Gene;gene=hemD;locus_tag=YPO3850
NC_003143.1	RefSeq	CDS	4320602	4321351	.	+	0	ID=cds3556;Name=YP_002348728.1;Parent=gene3748;Note=catalyzes the formation of uroporphyrinogen-III from hydroxymethylbilane%3B functions in tetrapyrrole and heme biosynthesis;Dbxref=InterPro:IPR003754,UniProtKB%2FTrEMBL:Q7CKY7,Genbank:YP_002348728.1,GeneID:1176685;gbkey=CDS;gene=hemD;product=uroporphyrinogen-III synthase;protein_id=YP_002348728.1;transl_table=11
NC_003143.1	RefSeq	gene	4321382	4322506	.	+	.	ID=gene3749;Name=hemX;Dbxref=GeneID:1176686;gbkey=Gene;gene=hemX;locus_tag=YPO3851
NC_003143.1	RefSeq	CDS	4321382	4322506	.	+	0	ID=cds3557;Name=YP_002348729.1;Parent=gene3749;Dbxref=InterPro:IPR007470,UniProtKB%2FTrEMBL:Q0WAF9,Genbank:YP_002348729.1,GeneID:1176686;gbkey=CDS;gene=hemX;product=uroporphyrinogen III C-methyltransferase;protein_id=YP_002348729.1;transl_table=11
NC_003143.1	RefSeq	region	4321490	4321549	.	+	.	ID=id2797;Note=1 probable transmembrane helix predicted;Dbxref=GeneID:1176686;gbkey=misc_feature;gene=hemX
NC_003143.1	RefSeq	gene	4322509	4323729	.	+	.	ID=gene3750;Name=hemY;Dbxref=GeneID:1176687;gbkey=Gene;gene=hemY;locus_tag=YPO3852
NC_003143.1	RefSeq	CDS	4322509	4323729	.	+	0	ID=cds3558;Name=YP_002348730.1;Parent=gene3750;Dbxref=InterPro:IPR005254,InterPro:IPR010817,InterPro:IPR011990,InterPro:IPR013026,InterPro:IPR013105,UniProtKB%2FTrEMBL:Q7CKY8,Genbank:YP_002348730.1,GeneID:1176687;gbkey=CDS;gene=hemY;product=protoheme IX biogenesis protein;protein_id=YP_002348730.1;transl_table=11
NC_003143.1	RefSeq	repeat_region	4323814	4324525	.	-	.	ID=id2798;Note=Contains a %27A%27 at nucleotide position 315%7EIS200-like insertion sequence:IS1541;gbkey=repeat_region
NC_003143.1	RefSeq	gene	4323922	4324380	.	-	.	ID=gene3751;Name=tnp;Dbxref=GeneID:1176688;gbkey=Gene;gene=tnp;locus_tag=YPO3853
NC_003143.1	RefSeq	CDS	4323922	4324380	.	-	0	ID=cds3559;Name=YP_002348731.1;Parent=gene3751;Dbxref=InterPro:IPR002686,UniProtKB%2FTrEMBL:Q56938,Genbank:YP_002348731.1,GeneID:1176688;gbkey=CDS;gene=tnp;product=transposase for the IS1541 insertion element;protein_id=YP_002348731.1;transl_table=11
NC_003143.1	RefSeq	gene	4325247	4325323	.	-	.	ID=gene3752;Name=YPt_62;Dbxref=GeneID:1176689;gbkey=Gene;locus_tag=YPt_62
NC_003143.1	RefSeq	tRNA	4325247	4325323	.	-	.	ID=rna91;Parent=gene3752;Note=tRNA Pro anticodon TGG%2C Cove score 92.73;Dbxref=GeneID:1176689;gbkey=tRNA;product=tRNA-Pro
NC_003143.1	RefSeq	exon	4325247	4325323	.	-	.	ID=id2799;Parent=rna91;Note=tRNA Pro anticodon TGG%2C Cove score 92.73;Dbxref=GeneID:1176689;gbkey=tRNA;product=tRNA-Pro
NC_003143.1	RefSeq	gene	4325399	4325485	.	-	.	ID=gene3753;Name=YPt_63;Dbxref=GeneID:1176690;gbkey=Gene;locus_tag=YPt_63
NC_003143.1	RefSeq	tRNA	4325399	4325485	.	-	.	ID=rna92;Parent=gene3753;Note=tRNA Leu anticodon CAG%2C Cove score 67.09;Dbxref=GeneID:1176690;gbkey=tRNA;product=tRNA-Leu
NC_003143.1	RefSeq	exon	4325399	4325485	.	-	.	ID=id2800;Parent=rna92;Note=tRNA Leu anticodon CAG%2C Cove score 67.09;Dbxref=GeneID:1176690;gbkey=tRNA;product=tRNA-Leu
NC_003143.1	RefSeq	gene	4325502	4325577	.	-	.	ID=gene3754;Name=YPt_64;Dbxref=GeneID:1176691;gbkey=Gene;locus_tag=YPt_64
NC_003143.1	RefSeq	tRNA	4325502	4325577	.	-	.	ID=rna93;Parent=gene3754;Note=tRNA His anticodon GTG%2C Cove score 84.86;Dbxref=GeneID:1176691;gbkey=tRNA;product=tRNA-His
NC_003143.1	RefSeq	exon	4325502	4325577	.	-	.	ID=id2801;Parent=rna93;Note=tRNA His anticodon GTG%2C Cove score 84.86;Dbxref=GeneID:1176691;gbkey=tRNA;product=tRNA-His
NC_003143.1	RefSeq	gene	4325661	4325737	.	-	.	ID=gene3755;Name=YPt_65;Dbxref=GeneID:1176692;gbkey=Gene;locus_tag=YPt_65
NC_003143.1	RefSeq	tRNA	4325661	4325737	.	-	.	ID=rna94;Parent=gene3755;Note=tRNA Arg anticodon CCG%2C Cove score 91.00;Dbxref=GeneID:1176692;gbkey=tRNA;product=tRNA-Arg
NC_003143.1	RefSeq	exon	4325661	4325737	.	-	.	ID=id2802;Parent=rna94;Note=tRNA Arg anticodon CCG%2C Cove score 91.00;Dbxref=GeneID:1176692;gbkey=tRNA;product=tRNA-Arg
NC_003143.1	RefSeq	gene	4325886	4327277	.	-	.	ID=gene3756;Name=YPO3854;Dbxref=GeneID:1176693;gbkey=Gene;locus_tag=YPO3854
NC_003143.1	RefSeq	CDS	4325886	4327277	.	-	0	ID=cds3560;Name=YP_002348732.1;Parent=gene3756;Note=uncharacterized member of the amino acid-polyamine-organocation %28APC%29 superfamily of amino acid transporters%3B unknown function;Dbxref=InterPro:IPR002293,InterPro:IPR004840,InterPro:IPR004841,UniProtKB%2FTrEMBL:Q7CKZ0,Genbank:YP_002348732.1,GeneID:1176693;gbkey=CDS;product=transport protein YifK;protein_id=YP_002348732.1;transl_table=11
NC_003143.1	RefSeq	region	4327059	4327151	.	-	.	ID=id2803;Note=PS00218 Amino acid permeases signature.;Dbxref=GeneID:1176693;gbkey=misc_feature
NC_003143.1	RefSeq	gene	4327801	4328541	.	-	.	ID=gene3757;Name=wecG;Dbxref=GeneID:1176694;gbkey=Gene;gene=wecG;locus_tag=YPO3855
NC_003143.1	RefSeq	CDS	4327801	4328541	.	-	0	ID=cds3561;Name=YP_002348733.1;Parent=gene3757;Dbxref=InterPro:IPR004629,InterPro:IPR012335,UniProtKB%2FTrEMBL:Q0WAF5,Genbank:YP_002348733.1,GeneID:1176694;gbkey=CDS;gene=wecG;product=UDP-N-acetyl-D-mannosaminuronic acid transferase;protein_id=YP_002348733.1;transl_table=11
NC_003143.1	RefSeq	gene	4328550	4329914	.	-	.	ID=gene3758;Name=wecF;Dbxref=GeneID:1176695;gbkey=Gene;gene=wecF;locus_tag=YPO3856
NC_003143.1	RefSeq	CDS	4328550	4329914	.	-	0	ID=cds3562;Name=YP_002348734.1;Parent=gene3758;Note=enterobacterial common antigen polymerase;Dbxref=InterPro:IPR010691,UniProtKB%2FTrEMBL:Q0WAF4,Genbank:YP_002348734.1,GeneID:1176695;gbkey=CDS;gene=wecF;product=common antigen polymerase;protein_id=YP_002348734.1;transl_table=11
NC_003143.1	RefSeq	gene	4329911	4330996	.	-	.	ID=gene3759;Name=wecF;Dbxref=GeneID:1176696;gbkey=Gene;gene=wecF;locus_tag=YPO3857
NC_003143.1	RefSeq	CDS	4329911	4330996	.	-	0	ID=cds3563;Name=YP_002348735.1;Parent=gene3759;Note=catalyzes the synthesis of a lipid-linked intermediate involved in ECA synthesis;Dbxref=InterPro:IPR009993,UniProtKB%2FTrEMBL:Q0WAF3,Genbank:YP_002348735.1,GeneID:1176696;gbkey=CDS;product=4-alpha-L-fucosyltransferase;protein_id=YP_002348735.1;transl_table=11
NC_003143.1	RefSeq	gene	4331019	4332275	.	-	.	ID=gene3760;Name=wzx;Dbxref=GeneID:1176697;gbkey=Gene;gene=wzx;gene_synonym=wzx,wzxE;locus_tag=YPO3858
NC_003143.1	RefSeq	CDS	4331019	4332275	.	-	0	ID=cds3564;Name=YP_002348736.1;Parent=gene3760;Dbxref=InterPro:IPR002797,UniProtKB%2FTrEMBL:Q7CKZ1,Genbank:YP_002348736.1,GeneID:1176697;gbkey=CDS;gene=wzx;product=lipopolysaccharide biosynthesis protein;protein_id=YP_002348736.1;transl_table=11
NC_003143.1	RefSeq	gene	4332277	4333407	.	-	.	ID=gene3761;Name=rffA;Dbxref=GeneID:1176698;gbkey=Gene;gene=rffA;gene_synonym=wecE;locus_tag=YPO3859
NC_003143.1	RefSeq	CDS	4332277	4333407	.	-	0	ID=cds3565;Name=YP_002348737.1;Parent=gene3761;Note=catalyzes the formation of dTDP-D-fucosamine from dTDP-4-oxo-6-deoxy-D-glucose in enterobacterial common antigen biosynthesis;Dbxref=InterPro:IPR000653,InterPro:IPR012749,UniProtKB%2FTrEMBL:Q0WAF1,Genbank:YP_002348737.1,GeneID:1176698;gbkey=CDS;gene=rffA;product=TDP-4-oxo-6-deoxy-D-glucose transaminase;protein_id=YP_002348737.1;transl_table=11
NC_003143.1	RefSeq	gene	4333409	4334077	.	-	.	ID=gene3762;Name=rffC;Dbxref=GeneID:1176699;gbkey=Gene;gene=rffC;gene_synonym=wecD;locus_tag=YPO3860
NC_003143.1	RefSeq	CDS	4333409	4334077	.	-	0	ID=cds3566;Name=YP_002348738.1;Parent=gene3762;Dbxref=InterPro:IPR000182,InterPro:IPR012752,UniProtKB%2FTrEMBL:Q0WAF0,Genbank:YP_002348738.1,GeneID:1176699;gbkey=CDS;gene=rffC;product=TDP-fucosamine acetyltransferase;protein_id=YP_002348738.1;transl_table=11
NC_003143.1	RefSeq	gene	4334124	4335005	.	-	.	ID=gene3763;Name=rffH;Dbxref=GeneID:1176700;gbkey=Gene;gene=rffH;locus_tag=YPO3861
NC_003143.1	RefSeq	CDS	4334124	4335005	.	-	0	ID=cds3567;Name=YP_002348739.1;Parent=gene3763;Dbxref=InterPro:IPR005835,InterPro:IPR005907,UniProtKB%2FTrEMBL:Q0WAE9,Genbank:YP_002348739.1,GeneID:1176700;gbkey=CDS;gene=rffH;product=glucose-1-phosphate thymidylyltransferase;protein_id=YP_002348739.1;transl_table=11
NC_003143.1	RefSeq	gene	4335300	4336367	.	-	.	ID=gene3764;Name=rffG;Dbxref=GeneID:1176701;gbkey=Gene;gene=rffG;locus_tag=YPO3862
NC_003143.1	RefSeq	CDS	4335300	4336367	.	-	0	ID=cds3568;Name=YP_002348740.1;Parent=gene3764;Dbxref=InterPro:IPR001509,InterPro:IPR005888,UniProtKB%2FTrEMBL:Q0WAE8,Genbank:YP_002348740.1,GeneID:1176701;gbkey=CDS;gene=rffG;product=dTDP-D-glucose-4%2C6-dehydratase;protein_id=YP_002348740.1;transl_table=11
NC_003143.1	RefSeq	gene	4336364	4337626	.	-	.	ID=gene3765;Name=wecC;Dbxref=GeneID:1176702;gbkey=Gene;gene=wecC;gene_synonym=rffD,wecC;locus_tag=YPO3863
NC_003143.1	RefSeq	CDS	4336364	4337626	.	-	0	ID=cds3569;Name=YP_002348741.1;Parent=gene3765;Note=catalyzes the oxidation of UDP-N-acetyl-D-mannosamine to UDP-N-acetylmannosaminuronic acid;Dbxref=InterPro:IPR001732,InterPro:IPR008927,UniProtKB%2FTrEMBL:Q0WAE7,Genbank:YP_002348741.1,GeneID:1176702;gbkey=CDS;gene=wecC;product=UDP-N-acetyl-D-mannosamine dehydrogenase;protein_id=YP_002348741.1;transl_table=11
NC_003143.1	RefSeq	gene	4337623	4338753	.	-	.	ID=gene3766;Name=nfrC;Dbxref=GeneID:1176703;gbkey=Gene;gene=nfrC;gene_synonym=rffE,wecB;locus_tag=YPO3864
NC_003143.1	RefSeq	CDS	4337623	4338753	.	-	0	ID=cds3570;Name=YP_002348742.1;Parent=gene3766;Dbxref=InterPro:IPR003331,UniProtKB%2FTrEMBL:Q0WAE6,Genbank:YP_002348742.1,GeneID:1176703;gbkey=CDS;gene=nfrC;product=UDP-N-acetylglucosamine 2-epimerase;protein_id=YP_002348742.1;transl_table=11
NC_003143.1	RefSeq	gene	4339034	4340095	.	-	.	ID=gene3767;Name=wzzE;Dbxref=GeneID:1176704;gbkey=Gene;gene=wzzE;gene_synonym=wzz,wzzE;locus_tag=YPO3865
NC_003143.1	RefSeq	CDS	4339034	4340095	.	-	0	ID=cds3571;Name=YP_002348743.1;Parent=gene3767;Note=Enterobacterial Common Antigen %28ECA%29 polysaccharide chain length modulation protein;Dbxref=InterPro:IPR003856,UniProtKB%2FTrEMBL:Q0WAE5,Genbank:YP_002348743.1,GeneID:1176704;gbkey=CDS;gene=wzzE;product=lipopolysaccharide biosynthesis protein WzzE;protein_id=YP_002348743.1;transl_table=11
NC_003143.1	RefSeq	gene	4340131	4341228	.	-	.	ID=gene3768;Name=rfe;Dbxref=GeneID:1176705;gbkey=Gene;gene=rfe;gene_synonym=rfe;locus_tag=YPO3866
NC_003143.1	RefSeq	CDS	4340131	4341228	.	-	0	ID=cds3572;Name=YP_002348744.1;Parent=gene3768;Dbxref=InterPro:IPR000715,InterPro:IPR012750,UniProtKB%2FTrEMBL:Q0WAE4,Genbank:YP_002348744.1,GeneID:1176705;gbkey=CDS;gene=rfe;product=undecaprenyl-phosphate alpha-N-acetylglucosaminyltransferase;protein_id=YP_002348744.1;transl_table=11
NC_003143.1	RefSeq	gene	4341763	4343022	.	-	.	ID=gene3769;Name=rho;Dbxref=GeneID:1176706;gbkey=Gene;gene=rho;gene_synonym=psuA,rho,rnsC,sbaA,tsu;locus_tag=YPO3867
NC_003143.1	RefSeq	CDS	4341763	4343022	.	-	0	ID=cds3573;Name=YP_002348745.1;Parent=gene3769;Note=An RNA-DNA helicase that actively releases nascent mRNAs from paused transcription complexes;Dbxref=InterPro:IPR000194,InterPro:IPR003593,InterPro:IPR004665,InterPro:IPR008994,InterPro:IPR011112,InterPro:IPR011113,InterPro:IPR011129,UniProtKB%2FTrEMBL:Q7CKZ2,Genbank:YP_002348745.1,GeneID:1176706;gbkey=CDS;gene=rho;product=transcription termination factor Rho;protein_id=YP_002348745.1;transl_table=11
NC_003143.1	RefSeq	region	4342468	4342491	.	-	.	ID=id2804;Note=PS00017 ATP%2FGTP-binding site motif A %28P-loop%29.;Dbxref=GeneID:1176706;gbkey=misc_feature;gene=rho
NC_003143.1	RefSeq	region	4342519	4342593	.	-	.	ID=id2805;Note=PS00464 Ribosomal protein L22 signature.;Dbxref=GeneID:1176706;gbkey=misc_feature;gene=rho
NC_003143.1	RefSeq	gene	4343502	4343828	.	-	.	ID=gene3770;Name=fipA;Dbxref=GeneID:1176707;gbkey=Gene;gene=fipA;gene_synonym=trxA,tsnC;locus_tag=YPO3868
NC_003143.1	RefSeq	CDS	4343502	4343828	.	-	0	ID=cds3574;Name=YP_002348746.1;Parent=gene3770;Dbxref=InterPro:IPR005746,InterPro:IPR006662,InterPro:IPR012335,InterPro:IPR012336,InterPro:IPR013766,UniProtKB%2FTrEMBL:Q7CKZ3,Genbank:YP_002348746.1,GeneID:1176707;gbkey=CDS;gene=fipA;product=thioredoxin;protein_id=YP_002348746.1;transl_table=11
NC_003143.1	RefSeq	region	4343700	4343756	.	-	.	ID=id2806;Note=PS00194 Thioredoxin family active site.;Dbxref=GeneID:1176707;gbkey=misc_feature;gene=fipA
NC_003143.1	RefSeq	gene	4343947	4345233	.	+	.	ID=gene3771;Name=rhlB;Dbxref=GeneID:1176708;gbkey=Gene;gene=rhlB;locus_tag=YPO3869
NC_003143.1	RefSeq	CDS	4343947	4345233	.	+	0	ID=cds3575;Name=YP_002348747.1;Parent=gene3771;Note=enables ATP-dependent unwinding of double stranded RNA as a component of the RNA degradosome%2C a multi-enzyme complex important in RNA processing and messenger RNA degradation;Dbxref=InterPro:IPR000629,InterPro:IPR001650,InterPro:IPR011545,InterPro:IPR014001,InterPro:IPR014014,InterPro:IPR014021,UniProtKB%2FTrEMBL:Q0WAE1,Genbank:YP_002348747.1,GeneID:1176708;gbkey=CDS;gene=rhlB;product=ATP-dependent RNA helicase RhlB;protein_id=YP_002348747.1;transl_table=11
NC_003143.1	RefSeq	region	4344103	4344126	.	+	.	ID=id2807;Note=PS00017 ATP%2FGTP-binding site motif A %28P-loop%29.;Dbxref=GeneID:1176708;gbkey=misc_feature;gene=rhlB
NC_003143.1	RefSeq	region	4344433	4344459	.	+	.	ID=id2808;Note=PS00039 DEAD-box subfamily ATP-dependent helicases signature.;Dbxref=GeneID:1176708;gbkey=misc_feature;gene=rhlB
NC_003143.1	RefSeq	gene	4345237	4346728	.	+	.	ID=gene3772;Name=gpp;Dbxref=GeneID:1176709;gbkey=Gene;gene=gpp;gene_synonym=gppA;locus_tag=YPO3870;pseudo=true
NC_003143.1	RefSeq	gene	4346899	4348920	.	-	.	ID=gene3773;Name=rep;Dbxref=GeneID:1176710;gbkey=Gene;gene=rep;locus_tag=YPO3872
NC_003143.1	RefSeq	CDS	4346899	4348920	.	-	0	ID=cds3576;Name=YP_002348748.1;Parent=gene3773;Note=single-stranded DNA-dependent ATPase%3B initiates unwinding at a nick in the DNA%3B involved in DNA replication;Dbxref=InterPro:IPR000212,InterPro:IPR005752,InterPro:IPR014016,InterPro:IPR014017,UniProtKB%2FTrEMBL:Q0WAE0,Genbank:YP_002348748.1,GeneID:1176710;gbkey=CDS;gene=rep;product=ATP-dependent DNA helicase Rep;protein_id=YP_002348748.1;transl_table=11
NC_003143.1	RefSeq	region	4348834	4348857	.	-	.	ID=id2809;Note=PS00017 ATP%2FGTP-binding site motif A %28P-loop%29.;Dbxref=GeneID:1176710;gbkey=misc_feature;gene=rep
NC_003143.1	RefSeq	gene	4349124	4349405	.	+	.	ID=gene3774;Name=ppiC;Dbxref=GeneID:1176711;gbkey=Gene;gene=ppiC;locus_tag=YPO3873
NC_003143.1	RefSeq	CDS	4349124	4349405	.	+	0	ID=cds3577;Name=YP_002348749.1;Parent=gene3774;Dbxref=InterPro:IPR000297,UniProtKB%2FTrEMBL:Q0WAD9,Genbank:YP_002348749.1,GeneID:1176711;gbkey=CDS;gene=ppiC;product=peptidyl-prolyl cis-trans isomerase C;protein_id=YP_002348749.1;transl_table=11
NC_003143.1	RefSeq	gene	4349644	4350435	.	+	.	ID=gene3775;Name=YPO3874;Dbxref=GeneID:1176712;gbkey=Gene;locus_tag=YPO3874
NC_003143.1	RefSeq	CDS	4349644	4350435	.	+	0	ID=cds3578;Name=YP_002348750.1;Parent=gene3775;Dbxref=InterPro:IPR007788,InterPro:IPR011041,UniProtKB%2FTrEMBL:Q7CKZ4,Genbank:YP_002348750.1,GeneID:1176712;gbkey=CDS;product=hypothetical protein;protein_id=YP_002348750.1;transl_table=11
NC_003143.1	RefSeq	repeat_region	4350461	4351775	.	+	.	ID=id2810;Note=insertion sequence:IS285;gbkey=repeat_region
NC_003143.1	RefSeq	repeat_region	4350461	4350489	.	+	.	ID=id2811;Note=IS285 inverted repeat;gbkey=repeat_region
NC_003143.1	RefSeq	gene	4350532	4351740	.	+	.	ID=gene3776;Name=y1062;Dbxref=GeneID:1176713;gbkey=Gene;gene=y1062;gene_synonym=ypmt1.80C;locus_tag=YPO3875
NC_003143.1	RefSeq	CDS	4350532	4351740	.	+	0	ID=cds3579;Name=YP_002348751.1;Parent=gene3776;Dbxref=InterPro:IPR001207,UniProtKB%2FTrEMBL:Q7ARB0,Genbank:YP_002348751.1,GeneID:1176713;gbkey=CDS;gene=y1062;product=transposase for the IS285 insertion element;protein_id=YP_002348751.1;transl_table=11
NC_003143.1	RefSeq	region	4351225	4351299	.	+	.	ID=id2812;Note=PS01007 Transposases%2C Mutator family%2C signature.;Dbxref=GeneID:1176713;gbkey=misc_feature;gene=y1062
NC_003143.1	RefSeq	repeat_region	4351747	4351775	.	-	.	ID=id2813;Note=IS285 inverted repeat;gbkey=repeat_region
NC_003143.1	RefSeq	gene	4352063	4352290	.	-	.	ID=gene3777;Name=YPO3876;Dbxref=GeneID:1176714;gbkey=Gene;locus_tag=YPO3876
NC_003143.1	RefSeq	CDS	4352063	4352290	.	-	0	ID=cds3580;Name=YP_002348752.1;Parent=gene3777;Note=no significant database hits. CDS DNA has a low G%2BC content%2C 24.12%25;Dbxref=UniProtKB%2FTrEMBL:Q74R99,Genbank:YP_002348752.1,GeneID:1176714;gbkey=CDS;product=hypothetical protein;protein_id=YP_002348752.1;transl_table=11
NC_003143.1	RefSeq	gene	4352550	4353080	.	+	.	ID=gene3778;Name=YPO3877;Dbxref=GeneID:1176715;gbkey=Gene;locus_tag=YPO3877
NC_003143.1	RefSeq	CDS	4352550	4353080	.	+	0	ID=cds3581;Name=YP_002348753.1;Parent=gene3778;Dbxref=InterPro:IPR000259,InterPro:IPR008966,UniProtKB%2FTrEMBL:Q7CKZ6,Genbank:YP_002348753.1,GeneID:1176715;gbkey=CDS;product=fimbrial protein;protein_id=YP_002348753.1;transl_table=11
NC_003143.1	RefSeq	gene	4353144	4353875	.	+	.	ID=gene3779;Name=YPO3878;Dbxref=GeneID:1176716;gbkey=Gene;locus_tag=YPO3878
NC_003143.1	RefSeq	CDS	4353144	4353875	.	+	0	ID=cds3582;Name=YP_002348754.1;Parent=gene3779;Dbxref=InterPro:IPR001829,InterPro:IPR008962,UniProtKB%2FTrEMBL:Q74RA1,Genbank:YP_002348754.1,GeneID:1176716;gbkey=CDS;product=fimbrial chaperone;protein_id=YP_002348754.1;transl_table=11
NC_003143.1	RefSeq	region	4353168	4353236	.	+	.	ID=id2814;Note=1 probable transmembrane helix predicted;Dbxref=GeneID:1176716;gbkey=misc_feature
NC_003143.1	RefSeq	gene	4353903	4356530	.	+	.	ID=gene3780;Name=YPO3879;Dbxref=GeneID:1176717;gbkey=Gene;locus_tag=YPO3879
NC_003143.1	RefSeq	CDS	4353903	4356530	.	+	0	ID=cds3583;Name=YP_002348755.1;Parent=gene3780;Dbxref=InterPro:IPR000015,UniProtKB%2FTrEMBL:Q7CKZ7,Genbank:YP_002348755.1,GeneID:1176717;gbkey=CDS;product=outer membrane usher protein;protein_id=YP_002348755.1;transl_table=11
NC_003143.1	RefSeq	region	4354905	4354937	.	+	.	ID=id2815;Note=PS01151 Fimbrial biogenesis outer membrane usher protein signature.;Dbxref=GeneID:1176717;gbkey=misc_feature
NC_003143.1	RefSeq	gene	4356547	4357914	.	+	.	ID=gene3781;Name=YPO3880;Dbxref=GeneID:1176718;gbkey=Gene;locus_tag=YPO3880
NC_003143.1	RefSeq	CDS	4356547	4357914	.	+	0	ID=cds3584;Name=YP_002348756.1;Parent=gene3781;Dbxref=InterPro:IPR000259,InterPro:IPR008966,InterPro:IPR011228,UniProtKB%2FTrEMBL:Q74RA3,Genbank:YP_002348756.1,GeneID:1176718;gbkey=CDS;product=hypothetical protein;protein_id=YP_002348756.1;transl_table=11
NC_003143.1	RefSeq	gene	4357952	4358698	.	+	.	ID=gene3782;Name=YPO3881;Dbxref=GeneID:1176719;gbkey=Gene;locus_tag=YPO3881
NC_003143.1	RefSeq	CDS	4357952	4358698	.	+	0	ID=cds3585;Name=YP_002348757.1;Parent=gene3782;Dbxref=InterPro:IPR001829,InterPro:IPR008962,UniProtKB%2FTrEMBL:Q0WAD1,Genbank:YP_002348757.1,GeneID:1176719;gbkey=CDS;product=chaperone protein;protein_id=YP_002348757.1;transl_table=11
NC_003143.1	RefSeq	region	4357979	4358047	.	+	.	ID=id2816;Note=1 probable transmembrane helix predicted;Dbxref=GeneID:1176719;gbkey=misc_feature
NC_003143.1	RefSeq	region	4358282	4358335	.	+	.	ID=id2817;Note=PS00635 Gram-negative pili assembly chaperone signature.;Dbxref=GeneID:1176719;gbkey=misc_feature
NC_003143.1	RefSeq	gene	4359333	4359590	.	-	.	ID=gene3783;Name=imm;Dbxref=GeneID:1176721;gbkey=Gene;gene=imm;locus_tag=YPO3883
NC_003143.1	RefSeq	CDS	4359333	4359590	.	-	0	ID=cds3586;Name=YP_002348759.1;Parent=gene3783;Dbxref=InterPro:IPR000290,UniProtKB%2FTrEMBL:Q0WAC9,Genbank:YP_002348759.1,GeneID:1176721;gbkey=CDS;gene=imm;product=colicin immunity protein;protein_id=YP_002348759.1;transl_table=11
NC_003143.1	RefSeq	gene	4360096	4360359	.	-	.	ID=gene3784;Name=YPO3885;Dbxref=GeneID:1176723;gbkey=Gene;locus_tag=YPO3885
NC_003143.1	RefSeq	CDS	4360096	4360359	.	-	0	ID=cds3587;Name=YP_002348761.1;Parent=gene3784;Note=no significant database hits;Dbxref=UniProtKB%2FTrEMBL:Q74RA7,Genbank:YP_002348761.1,GeneID:1176723;gbkey=CDS;product=hypothetical protein;protein_id=YP_002348761.1;transl_table=11
NC_003143.1	RefSeq	gene	4360359	4362197	.	-	.	ID=gene3785;Name=YPO3887;Dbxref=GeneID:1176725;gbkey=Gene;locus_tag=YPO3887;pseudo=true
NC_003143.1	RefSeq	gene	4362378	4363856	.	-	.	ID=gene3786;Name=ilvC;Dbxref=GeneID:1176726;gbkey=Gene;gene=ilvC;locus_tag=YPO3888
NC_003143.1	RefSeq	CDS	4362378	4363856	.	-	0	ID=cds3588;Name=YP_002348764.1;Parent=gene3786;Note=catalyzes the formation of %28R%29-2%2C3-dihydroxy-3-methylbutanoate from %28S%29-2-hydroxy-2-methyl-3-oxobutanoate in valine and isoleucine biosynthesis;Dbxref=InterPro:IPR000506,InterPro:IPR008927,InterPro:IPR013023,InterPro:IPR013116,UniProtKB%2FTrEMBL:Q0WAC4,Genbank:YP_002348764.1,GeneID:1176726;gbkey=CDS;gene=ilvC;product=ketol-acid reductoisomerase;protein_id=YP_002348764.1;transl_table=11
NC_003143.1	RefSeq	gene	4364142	4365023	.	+	.	ID=gene3787;Name=ilvY;Dbxref=GeneID:1176727;gbkey=Gene;gene=ilvY;locus_tag=YPO3889
NC_003143.1	RefSeq	CDS	4364142	4365023	.	+	0	ID=cds3589;Name=YP_002348765.1;Parent=gene3787;Note=participates in controlling several genes involved in isoleucine and valine biosynthesis%3B activates the transcription of the ilvC gene in the presence of acetolactate or acetohydroxybutyrate;Dbxref=InterPro:IPR000847,InterPro:IPR005119,InterPro:IPR011991,UniProtKB%2FTrEMBL:Q0WAC3,Genbank:YP_002348765.1,GeneID:1176727;gbkey=CDS;gene=ilvY;product=DNA-binding transcriptional regulator IlvY;protein_id=YP_002348765.1;transl_table=11
NC_003143.1	RefSeq	region	4364187	4364252	.	+	.	ID=id2818;Note=Predicted helix-turn-helix motif with score 1928 %28%2B5.75 SD%29 at aa 16-37%2C sequence RHFGRSAKAMHVSPSTLSRQIQ;Dbxref=GeneID:1176727;gbkey=misc_feature;gene=ilvY
NC_003143.1	RefSeq	region	4364190	4364282	.	+	.	ID=id2819;Note=PS00044 Bacterial regulatory proteins%2C lysR family signature.;Dbxref=GeneID:1176727;gbkey=misc_feature;gene=ilvY
NC_003143.1	RefSeq	gene	4365078	4365287	.	-	.	ID=gene3788;Name=YPO3890;Dbxref=GeneID:1176728;gbkey=Gene;locus_tag=YPO3890
NC_003143.1	RefSeq	CDS	4365078	4365287	.	-	0	ID=cds3590;Name=YP_002348766.1;Parent=gene3788;Note=no significant database hits;Dbxref=UniProtKB%2FTrEMBL:Q74RB0,Genbank:YP_002348766.1,GeneID:1176728;gbkey=CDS;product=hypothetical protein;protein_id=YP_002348766.1;transl_table=11
NC_003143.1	RefSeq	gene	4365899	4366854	.	+	.	ID=gene3789;Name=YPO3891;Dbxref=GeneID:1176729;gbkey=Gene;locus_tag=YPO3891;pseudo=true
NC_003143.1	RefSeq	repeat_region	4366790	4367265	.	+	.	ID=id2820;Note=Repeated sequence thought to encode a possible membrane protein with no database hits. This sequence is repeated at positions :3197462..3197890%2C 4367331..4367806%2C4367872..4368406%2C complement%284419711..4420226%29 and complement%284484307..4484653%29;gbkey=repeat_region
NC_003143.1	RefSeq	gene	4366838	4367299	.	+	.	ID=gene3790;Name=YPO3893;Dbxref=GeneID:1176731;gbkey=Gene;locus_tag=YPO3893
NC_003143.1	RefSeq	CDS	4366838	4367299	.	+	0	ID=cds3591;Name=YP_002348769.1;Parent=gene3790;Dbxref=InterPro:IPR010351,UniProtKB%2FTrEMBL:Q7CKZ9,Genbank:YP_002348769.1,GeneID:1176731;gbkey=CDS;product=hypothetical protein;protein_id=YP_002348769.1;transl_table=11
NC_003143.1	RefSeq	region	4366856	4366921	.	+	.	ID=id2821;Note=1 probable transmembrane helix predicted;Dbxref=GeneID:1176731;gbkey=misc_feature
NC_003143.1	RefSeq	repeat_region	4367331	4367806	.	+	.	ID=id2822;Note=Repeated sequence thought to encode a possible membrane protein with no database hits. This sequence is repeated at positions :3197462..3197890%2C 4366790..4367265%2C4367872..4368406%2C complement%284419711..4420226%29 and complement%284484307..4484653%29;gbkey=repeat_region
NC_003143.1	RefSeq	gene	4367358	4367840	.	+	.	ID=gene3791;Name=YPO3894;Dbxref=GeneID:1176732;gbkey=Gene;locus_tag=YPO3894
NC_003143.1	RefSeq	CDS	4367358	4367840	.	+	0	ID=cds3592;Name=YP_002348770.1;Parent=gene3791;Note=No significant database matches. Similar to YPO3893 %2897.6%25 identity in 123 aa overlap%29%2C YPO3895 %2867.1%25 identity in 161 aa overlap%29%2C YPO3935 %2866.0%25 identity in 159 aa overlap%29 and YPO2860 %2853.8%25 identity in 160 aa overlap%29;Dbxref=InterPro:IPR010351,UniProtKB%2FTrEMBL:Q7CL00,Genbank:YP_002348770.1,GeneID:1176732;gbkey=CDS;product=hypothetical protein;protein_id=YP_002348770.1;transl_table=11
NC_003143.1	RefSeq	region	4367400	4367462	.	+	.	ID=id2823;Note=1 probable transmembrane helix predicted;Dbxref=GeneID:1176732;gbkey=misc_feature
NC_003143.1	RefSeq	repeat_region	4367872	4368406	.	+	.	ID=id2824;Note=Repeated sequence thought to encode a possible membrane protein with no database hits. This sequence is repeated at positions :3197462..3197890%2C 4366790..4367265%2C4367331..4367806%2C complement%284419711..4420226%29 and complement%284484307..4484653%29;gbkey=repeat_region
NC_003143.1	RefSeq	gene	4367899	4368384	.	+	.	ID=gene3792;Name=YPO3895;Dbxref=GeneID:1176733;gbkey=Gene;locus_tag=YPO3895
NC_003143.1	RefSeq	CDS	4367899	4368384	.	+	0	ID=cds3593;Name=YP_002348771.1;Parent=gene3792;Note=No significant database matches. Similar to YPO3935 %2872.5%25 identity in 160 aa overlap%29%2C YPO3894 %2867.1%25 identity in 161 aa overlap%29%2C YPO2860 %2856.6%25 identity in 159 aa overlap%29 and YPO3893 %2858.9%25 identity in 124 aa overlap%29;Dbxref=InterPro:IPR010351,UniProtKB%2FTrEMBL:Q7CL01,Genbank:YP_002348771.1,GeneID:1176733;gbkey=CDS;product=hypothetical protein;protein_id=YP_002348771.1;transl_table=11
NC_003143.1	RefSeq	region	4367941	4368000	.	+	.	ID=id2825;Note=1 probable transmembrane helix predicted;Dbxref=GeneID:1176733;gbkey=misc_feature
NC_003143.1	RefSeq	gene	4368515	4370059	.	-	.	ID=gene3793;Name=ilvA;Dbxref=GeneID:1176734;gbkey=Gene;gene=ilvA;locus_tag=YPO3896
NC_003143.1	RefSeq	CDS	4368515	4370059	.	-	0	ID=cds3594;Name=YP_002348772.1;Parent=gene3793;Note=threonine deaminase%3B threonine dehydratase%3B in Escherichia coli%2C IlvA is part of the isoleucine biosynthetic pathway;Dbxref=InterPro:IPR000634,InterPro:IPR001721,InterPro:IPR001926,InterPro:IPR005787,UniProtKB%2FTrEMBL:Q7CL02,Genbank:YP_002348772.1,GeneID:1176734;gbkey=CDS;gene=ilvA;product=threonine dehydratase;protein_id=YP_002348772.1;transl_table=11
NC_003143.1	RefSeq	region	4369862	4369903	.	-	.	ID=id2826;Note=PS00165 Serine%2Fthreonine dehydratases pyridoxal-phosphate attachment site.;Dbxref=GeneID:1176734;gbkey=misc_feature;gene=ilvA
NC_003143.1	RefSeq	gene	4370065	4371915	.	-	.	ID=gene3794;Name=ilvD;Dbxref=GeneID:1176735;gbkey=Gene;gene=ilvD;locus_tag=YPO3897
NC_003143.1	RefSeq	CDS	4370065	4371915	.	-	0	ID=cds3595;Name=YP_002348773.1;Parent=gene3794;Note=catalyzes the dehydration of 2%2C3-dihydroxy-3-methylbutanoate to 3-methyl-2-oxobutanoate in valine and isoleucine biosynthesis;Dbxref=InterPro:IPR000581,InterPro:IPR001697,InterPro:IPR004404,UniProtKB%2FTrEMBL:Q0WAB5,Genbank:YP_002348773.1,GeneID:1176735;gbkey=CDS;gene=ilvD;product=dihydroxy-acid dehydratase;protein_id=YP_002348773.1;transl_table=11
NC_003143.1	RefSeq	region	4370356	4370391	.	-	.	ID=id2827;Note=PS00887 Dihydroxy-acid and 6-phosphogluconate dehydratases signature 2.;Dbxref=GeneID:1176735;gbkey=misc_feature;gene=ilvD
NC_003143.1	RefSeq	region	4371457	4371480	.	-	.	ID=id2828;Note=PS00017 ATP%2FGTP-binding site motif A %28P-loop%29.;Dbxref=GeneID:1176735;gbkey=misc_feature;gene=ilvD
NC_003143.1	RefSeq	region	4371520	4371552	.	-	.	ID=id2829;Note=PS00886 Dihydroxy-acid and 6-phosphogluconate dehydratases signature 1.;Dbxref=GeneID:1176735;gbkey=misc_feature;gene=ilvD
NC_003143.1	RefSeq	repeat_region	4371951	4372091	.	+	.	ID=id2830;Note=approx. 8 x 18 bp repeats;gbkey=repeat_region
NC_003143.1	RefSeq	gene	4372226	4373152	.	-	.	ID=gene3795;Name=ilvE;Dbxref=GeneID:1176736;gbkey=Gene;gene=ilvE;locus_tag=YPO3899
NC_003143.1	RefSeq	CDS	4372226	4373152	.	-	0	ID=cds3596;Name=YP_002348774.1;Parent=gene3795;Note=catalyzes the transamination of the branched-chain amino acids to their respective alpha-keto acids;Dbxref=InterPro:IPR001544,InterPro:IPR005785,UniProtKB%2FTrEMBL:Q74RB6,Genbank:YP_002348774.1,GeneID:1176736;gbkey=CDS;gene=ilvE;product=branched-chain amino acid aminotransferase;protein_id=YP_002348774.1;transl_table=11
NC_003143.1	RefSeq	region	4372487	4372576	.	-	.	ID=id2831;Note=PS00770 Aminotransferases class-IV signature.;Dbxref=GeneID:1176736;gbkey=misc_feature;gene=ilvE
NC_003143.1	RefSeq	gene	4373175	4373432	.	-	.	ID=gene3796;Name=ilvM;Dbxref=GeneID:1176737;gbkey=Gene;gene=ilvM;locus_tag=YPO3900
NC_003143.1	RefSeq	CDS	4373175	4373432	.	-	0	ID=cds3597;Name=YP_002348775.1;Parent=gene3796;Dbxref=InterPro:IPR004789,UniProtKB%2FTrEMBL:Q74RB7,Genbank:YP_002348775.1,GeneID:1176737;gbkey=CDS;gene=ilvM;product=acetolactate synthase 2 regulatory subunit;protein_id=YP_002348775.1;transl_table=11
NC_003143.1	RefSeq	gene	4373429	4375075	.	-	.	ID=gene3797;Name=ilvG;Dbxref=GeneID:1176738;gbkey=Gene;gene=ilvG;locus_tag=YPO3901
NC_003143.1	RefSeq	CDS	4373429	4375075	.	-	0	ID=cds3598;Name=YP_002348776.1;Parent=gene3797;Note=catalyzes the formation of 2-acetolactate from pyruvate%3B also known as acetolactate synthase large subunit;Dbxref=InterPro:IPR000399,InterPro:IPR011766,InterPro:IPR012000,InterPro:IPR012001,InterPro:IPR012846,UniProtKB%2FTrEMBL:Q7CL03,Genbank:YP_002348776.1,GeneID:1176738;gbkey=CDS;gene=ilvG;product=acetolactate synthase 2 catalytic subunit;protein_id=YP_002348776.1;transl_table=11
NC_003143.1	RefSeq	region	4373786	4373845	.	-	.	ID=id2832;Note=PS00187 Thiamine pyrophosphate enzymes signature.;Dbxref=GeneID:1176738;gbkey=misc_feature;gene=ilvG
NC_003143.1	RefSeq	region	4374806	4374898	.	-	.	ID=id2833;Note=PS00044 Bacterial regulatory proteins%2C lysR family signature.;Dbxref=GeneID:1176738;gbkey=misc_feature;gene=ilvG
NC_003143.1	RefSeq	gene	4375698	4377221	.	+	.	ID=gene3798;Name=YPO3902;Dbxref=GeneID:1176739;gbkey=Gene;locus_tag=YPO3902
NC_003143.1	RefSeq	CDS	4375698	4377221	.	+	0	ID=cds3599;Name=YP_002348777.1;Parent=gene3798;Dbxref=InterPro:IPR000523,InterPro:IPR001208,InterPro:IPR003593,InterPro:IPR004482,UniProtKB%2FTrEMBL:Q74RB9,Genbank:YP_002348777.1,GeneID:1176739;gbkey=CDS;product=magnesium chelatase family protein;protein_id=YP_002348777.1;transl_table=11
NC_003143.1	RefSeq	region	4376349	4376372	.	+	.	ID=id2834;Note=PS00017 ATP%2FGTP-binding site motif A %28P-loop%29.;Dbxref=GeneID:1176739;gbkey=misc_feature
NC_003143.1	RefSeq	gene	4377478	4377816	.	-	.	ID=gene3799;Name=YPO3903;Dbxref=GeneID:1176740;gbkey=Gene;locus_tag=YPO3903
NC_003143.1	RefSeq	CDS	4377478	4377816	.	-	0	ID=cds3600;Name=YP_002348778.1;Parent=gene3799;Dbxref=InterPro:IPR007335,UniProtKB%2FTrEMBL:Q0WAB0,Genbank:YP_002348778.1,GeneID:1176740;gbkey=CDS;product=hypothetical protein;protein_id=YP_002348778.1;transl_table=11
NC_003143.1	RefSeq	gene	4377935	4378816	.	+	.	ID=gene3800;Name=YPO3904;Dbxref=GeneID:1176741;gbkey=Gene;locus_tag=YPO3904
NC_003143.1	RefSeq	CDS	4377935	4378816	.	+	0	ID=cds3601;Name=YP_002348779.1;Parent=gene3800;Note=Negatively regulates the transcription of the flagellar master operon flhDC by binding to the upstream region of the operon;Dbxref=InterPro:IPR000847,InterPro:IPR005119,UniProtKB%2FTrEMBL:Q0WAA9,Genbank:YP_002348779.1,GeneID:1176741;gbkey=CDS;product=transcriptional regulator HdfR;protein_id=YP_002348779.1;transl_table=11
NC_003143.1	RefSeq	region	4377980	4378045	.	+	.	ID=id2835;Note=Predicted helix-turn-helix motif with score 1285 %28%2B3.56 SD%29 at aa 16-37%2C sequence RHFGRAAESLYLTQSAVSFRIR;Dbxref=GeneID:1176741;gbkey=misc_feature
NC_003143.1	RefSeq	region	4377983	4378075	.	+	.	ID=id2836;Note=PS00044 Bacterial regulatory proteins%2C lysR family signature.;Dbxref=GeneID:1176741;gbkey=misc_feature
NC_003143.1	RefSeq	gene	4378803	4379795	.	-	.	ID=gene3801;Name=YPO3905;Dbxref=GeneID:1176742;gbkey=Gene;locus_tag=YPO3905
NC_003143.1	RefSeq	CDS	4378803	4379795	.	-	0	ID=cds3602;Name=YP_002348780.1;Parent=gene3801;Note=membrane component of a  sugar ABC transporter system;Dbxref=InterPro:IPR001851,UniProtKB%2FTrEMBL:Q7CL04,Genbank:YP_002348780.1,GeneID:1176742;gbkey=CDS;product=ABC transporter permease;protein_id=YP_002348780.1;transl_table=11
NC_003143.1	RefSeq	gene	4379795	4380814	.	-	.	ID=gene3802;Name=YPO3906;Dbxref=GeneID:1176743;gbkey=Gene;locus_tag=YPO3906
NC_003143.1	RefSeq	CDS	4379795	4380814	.	-	0	ID=cds3603;Name=YP_002348781.1;Parent=gene3802;Dbxref=InterPro:IPR001851,UniProtKB%2FTrEMBL:Q7CL05,Genbank:YP_002348781.1,GeneID:1176743;gbkey=CDS;product=sugar transport system permease;protein_id=YP_002348781.1;transl_table=11
NC_003143.1	RefSeq	gene	4380826	4382316	.	-	.	ID=gene3803;Name=YPO3907;Dbxref=GeneID:1176744;gbkey=Gene;locus_tag=YPO3907
NC_003143.1	RefSeq	CDS	4380826	4382316	.	-	0	ID=cds3604;Name=YP_002348782.1;Parent=gene3803;Dbxref=InterPro:IPR003439,InterPro:IPR003593,UniProtKB%2FTrEMBL:Q7CL06,Genbank:YP_002348782.1,GeneID:1176744;gbkey=CDS;product=sugar transport system ATP-binding protein;protein_id=YP_002348782.1;transl_table=11
NC_003143.1	RefSeq	region	4381081	4381125	.	-	.	ID=id2837;Note=PS00211 ABC transporters family signature.;Dbxref=GeneID:1176744;gbkey=misc_feature
NC_003143.1	RefSeq	region	4382185	4382208	.	-	.	ID=id2838;Note=PS00017 ATP%2FGTP-binding site motif A %28P-loop%29.;Dbxref=GeneID:1176744;gbkey=misc_feature
NC_003143.1	RefSeq	gene	4382402	4383358	.	-	.	ID=gene3804;Name=YPO3908;Dbxref=GeneID:1176745;gbkey=Gene;locus_tag=YPO3908
NC_003143.1	RefSeq	CDS	4382402	4383358	.	-	0	ID=cds3605;Name=YP_002348783.1;Parent=gene3804;Dbxref=InterPro:IPR001761,UniProtKB%2FTrEMBL:Q7CL07,Genbank:YP_002348783.1,GeneID:1176745;gbkey=CDS;product=periplasmic protein;protein_id=YP_002348783.1;transl_table=11
NC_003143.1	RefSeq	region	4383278	4383343	.	-	.	ID=id2839;Note=1 probable transmembrane helix predicted;Dbxref=GeneID:1176745;gbkey=misc_feature
NC_003143.1	RefSeq	gene	4384336	4384411	.	-	.	ID=gene3805;Name=YPt_66;Dbxref=GeneID:1176746;gbkey=Gene;locus_tag=YPt_66
NC_003143.1	RefSeq	tRNA	4384336	4384411	.	-	.	ID=rna95;Parent=gene3805;Note=tRNA Trp anticodon CCA%2C Cove score 82.06;Dbxref=GeneID:1176746;gbkey=tRNA;product=tRNA-Trp
NC_003143.1	RefSeq	exon	4384336	4384411	.	-	.	ID=id2840;Parent=rna95;Note=tRNA Trp anticodon CCA%2C Cove score 82.06;Dbxref=GeneID:1176746;gbkey=tRNA;product=tRNA-Trp
NC_003143.1	RefSeq	gene	4384420	4384496	.	-	.	ID=gene3806;Name=YPt_67;Dbxref=GeneID:1176747;gbkey=Gene;locus_tag=YPt_67
NC_003143.1	RefSeq	tRNA	4384420	4384496	.	-	.	ID=rna96;Parent=gene3806;Note=tRNA Asp anticodon GTC%2C Cove score 90.47;Dbxref=GeneID:1176747;gbkey=tRNA;product=tRNA-Asp
NC_003143.1	RefSeq	exon	4384420	4384496	.	-	.	ID=id2841;Parent=rna96;Note=tRNA Asp anticodon GTC%2C Cove score 90.47;Dbxref=GeneID:1176747;gbkey=tRNA;product=tRNA-Asp
NC_003143.1	RefSeq	gene	4384622	4384737	.	-	.	ID=gene3807;Name=YPOr17;Dbxref=GeneID:1176748;gbkey=Gene;locus_tag=YPOr17
NC_003143.1	RefSeq	rRNA	4384622	4384737	.	-	.	ID=rna97;Parent=gene3807;Note=match to 5SrRNA 1..234  blast score 1140  percent identity 98  %28incl. 23S-5S spacer%29;Dbxref=GeneID:1176748;gbkey=rRNA;product=5S ribosomal RNA
NC_003143.1	RefSeq	exon	4384622	4384737	.	-	.	ID=id2842;Parent=rna97;Note=match to 5SrRNA 1..234  blast score 1140  percent identity 98  %28incl. 23S-5S spacer%29;Dbxref=GeneID:1176748;gbkey=rRNA;product=5S ribosomal RNA
NC_003143.1	RefSeq	gene	4384847	4387753	.	-	.	ID=gene3808;Name=YPOr18;Dbxref=GeneID:1176749;gbkey=Gene;locus_tag=YPOr18
NC_003143.1	RefSeq	rRNA	4384847	4387753	.	-	.	ID=rna98;Parent=gene3808;Note=match to 23S_rRNA 1..2906 %28Y. enterocolitica 23S EMBL:U77925 %29;Dbxref=GeneID:1176749;gbkey=rRNA;product=23S ribosomal RNA
NC_003143.1	RefSeq	exon	4384847	4387753	.	-	.	ID=id2843;Parent=rna98;Note=match to 23S_rRNA 1..2906 %28Y. enterocolitica 23S EMBL:U77925 %29;Dbxref=GeneID:1176749;gbkey=rRNA;product=23S ribosomal RNA
NC_003143.1	RefSeq	gene	4388006	4388081	.	-	.	ID=gene3809;Name=YPt_68;Dbxref=GeneID:1176750;gbkey=Gene;locus_tag=YPt_68
NC_003143.1	RefSeq	tRNA	4388006	4388081	.	-	.	ID=rna99;Parent=gene3809;Note=tRNA Glu anticodon TTC%2C Cove score 56.95;Dbxref=GeneID:1176750;gbkey=tRNA;product=tRNA-Glu
NC_003143.1	RefSeq	exon	4388006	4388081	.	-	.	ID=id2844;Parent=rna99;Note=tRNA Glu anticodon TTC%2C Cove score 56.95;Dbxref=GeneID:1176750;gbkey=tRNA;product=tRNA-Glu
NC_003143.1	RefSeq	gene	4388245	4389733	.	-	.	ID=gene3810;Name=YPOr19;Dbxref=GeneID:1176751;gbkey=Gene;locus_tag=YPOr19
NC_003143.1	RefSeq	rRNA	4388245	4389733	.	-	.	ID=rna100;Parent=gene3810;Note=match to 16S_rRNA 1..1489  %28EMBL:YPE16SA%29;Dbxref=GeneID:1176751;gbkey=rRNA;product=16S ribosomal RNA
NC_003143.1	RefSeq	exon	4388245	4389733	.	-	.	ID=id2845;Parent=rna100;Note=match to 16S_rRNA 1..1489  %28EMBL:YPE16SA%29;Dbxref=GeneID:1176751;gbkey=rRNA;product=16S ribosomal RNA
NC_003143.1	RefSeq	gene	4389766	4389951	.	+	.	ID=gene3811;Name=YPO3909a;Dbxref=GeneID:16744783;gbkey=Gene;locus_tag=YPO3909a
NC_003143.1	RefSeq	CDS	4389766	4389951	.	+	0	ID=cds3606;Name=YP_008479734.1;Parent=gene3811;Dbxref=Genbank:YP_008479734.1,GeneID:16744783;gbkey=CDS;product=hypothetical protein;protein_id=YP_008479734.1;transl_table=11
NC_003143.1	RefSeq	gene	4390216	4391079	.	-	.	ID=gene3812;Name=murI;Dbxref=GeneID:1176752;gbkey=Gene;gene=murI;gene_synonym=glr,murI;locus_tag=YPO3909
NC_003143.1	RefSeq	CDS	4390216	4391079	.	-	0	ID=cds3607;Name=YP_002348784.1;Parent=gene3812;Note=converts L-glutamate to D-glutamate%2C a component of peptidoglycan;Dbxref=InterPro:IPR001920,InterPro:IPR004391,UniProtKB%2FTrEMBL:Q0WAA4,Genbank:YP_002348784.1,GeneID:1176752;gbkey=CDS;gene=murI;product=glutamate racemase;protein_id=YP_002348784.1;transl_table=11
NC_003143.1	RefSeq	region	4390438	4390470	.	-	.	ID=id2846;Note=PS00924 Aspartate and glutamate racemases signature 2.;Dbxref=GeneID:1176752;gbkey=misc_feature;gene=murI
NC_003143.1	RefSeq	region	4390777	4390803	.	-	.	ID=id2847;Note=PS00923 Aspartate and glutamate racemases signature 1.;Dbxref=GeneID:1176752;gbkey=misc_feature;gene=murI
NC_003143.1	RefSeq	gene	4391024	4392919	.	-	.	ID=gene3813;Name=btuB;Dbxref=GeneID:1176753;gbkey=Gene;gene=btuB;locus_tag=YPO3910
NC_003143.1	RefSeq	CDS	4391024	4392919	.	-	0	ID=cds3608;Name=YP_002348785.2;Parent=gene3813;Note=involved in the active translocation of vitamin B12 %28cyanocobalamin%29 across the outer membrane to the periplasmic space;Dbxref=InterPro:IPR000531,InterPro:IPR010101,InterPro:IPR010916,InterPro:IPR010917,InterPro:IPR012910,UniProtKB%2FTrEMBL:Q0WAA3,Genbank:YP_002348785.2,GeneID:1176753;gbkey=CDS;gene=btuB;product=vitamin B12%2Fcobalamin outer membrane transporter;protein_id=YP_002348785.2;transl_table=11
NC_003143.1	RefSeq	region	4391027	4391080	.	-	.	ID=id2848;Note=PS01156 TonB-dependent receptor proteins signature 2.;Dbxref=GeneID:1176753;gbkey=misc_feature;gene=btuB
NC_003143.1	RefSeq	gene	4393381	4394484	.	+	.	ID=gene3814;Name=trmA;Dbxref=GeneID:1176754;gbkey=Gene;gene=trmA;locus_tag=YPO3911
NC_003143.1	RefSeq	CDS	4393381	4394484	.	+	0	ID=cds3609;Name=YP_002348786.1;Parent=gene3814;Note=catalyzes the formation of 5-methyl-uridine at position 54 in all tRNAs;Dbxref=InterPro:IPR010280,InterPro:IPR011869,UniProtKB%2FTrEMBL:Q0WAA2,Genbank:YP_002348786.1,GeneID:1176754;gbkey=CDS;gene=trmA;product=tRNA %28uracil-5-%29-methyltransferase;protein_id=YP_002348786.1;transl_table=11
NC_003143.1	RefSeq	region	4394275	4394364	.	+	.	ID=id2849;Note=PS01230 RNA methyltransferase trmA family signature 1.;Dbxref=GeneID:1176754;gbkey=misc_feature;gene=trmA
NC_003143.1	RefSeq	region	4394422	4394454	.	+	.	ID=id2850;Note=PS01231 RNA methyltransferase trmA family signature 2.;Dbxref=GeneID:1176754;gbkey=misc_feature;gene=trmA
NC_003143.1	RefSeq	gene	4394618	4395025	.	-	.	ID=gene3815;Name=yijD;Dbxref=GeneID:1176755;gbkey=Gene;gene=yijD;locus_tag=YPO3912
NC_003143.1	RefSeq	CDS	4394618	4395025	.	-	0	ID=cds3610;Name=YP_002348787.1;Parent=gene3815;Dbxref=InterPro:IPR009867,UniProtKB%2FTrEMBL:Q7CL08,Genbank:YP_002348787.1,GeneID:1176755;gbkey=CDS;gene=yijD;product=hypothetical protein;protein_id=YP_002348787.1;transl_table=11
NC_003143.1	RefSeq	gene	4395038	4395685	.	-	.	ID=gene3816;Name=YPO3913;Dbxref=GeneID:1176756;gbkey=Gene;locus_tag=YPO3913
NC_003143.1	RefSeq	CDS	4395038	4395685	.	-	0	ID=cds3611;Name=YP_002348788.1;Parent=gene3816;Note=negatively controls the expression of fabA and fabB%2C genes involved in the unsaturated fatty acid biosynthesis;Dbxref=InterPro:IPR001647,InterPro:IPR009057,InterPro:IPR012287,UniProtKB%2FTrEMBL:Q7CL09,Genbank:YP_002348788.1,GeneID:1176756;gbkey=CDS;product=DNA-binding transcriptional repressor FabR;protein_id=YP_002348788.1;transl_table=11
NC_003143.1	RefSeq	region	4395515	4395580	.	-	.	ID=id2851;Note=Predicted helix-turn-helix motif with score 1615 %28%2B4.69 SD%29 at aa 36-57%2C sequence LSLREVSREAGIAPTSFYRHFR;Dbxref=GeneID:1176756;gbkey=misc_feature
NC_003143.1	RefSeq	gene	4395891	4397291	.	+	.	ID=gene3817;Name=sthA;Dbxref=GeneID:1176757;gbkey=Gene;gene=sthA;gene_synonym=udhA;locus_tag=YPO3914
NC_003143.1	RefSeq	CDS	4395891	4397291	.	+	0	ID=cds3612;Name=YP_002348789.1;Parent=gene3817;Note=catalyzes the conversion of NADPH to NADH;Dbxref=InterPro:IPR000759,InterPro:IPR000815,InterPro:IPR001100,InterPro:IPR001327,InterPro:IPR004099,InterPro:IPR013027,UniProtKB%2FTrEMBL:Q0WA99,Genbank:YP_002348789.1,GeneID:1176757;gbkey=CDS;gene=sthA;product=soluble pyridine nucleotide transhydrogenase;protein_id=YP_002348789.1;transl_table=11
NC_003143.1	RefSeq	gene	4397274	4398191	.	-	.	ID=gene3818;Name=oxyR;Dbxref=GeneID:1176758;gbkey=Gene;gene=oxyR;locus_tag=YPO3915
NC_003143.1	RefSeq	CDS	4397274	4398191	.	-	0	ID=cds3613;Name=YP_002348790.1;Parent=gene3818;Note=Activates the expression of a regulon of hydrogen peroxide-inducible genes such as katG%2C gor%2C ahpC%2C ahpF%2C oxyS%2C dps%2C fur and grxA;Dbxref=InterPro:IPR000847,InterPro:IPR005119,InterPro:IPR011991,UniProtKB%2FTrEMBL:Q7CL10,Genbank:YP_002348790.1,GeneID:1176758;gbkey=CDS;gene=oxyR;product=DNA-binding transcriptional regulator OxyR;protein_id=YP_002348790.1;transl_table=11
NC_003143.1	RefSeq	region	4398051	4398143	.	-	.	ID=id2852;Note=PS00044 Bacterial regulatory proteins%2C lysR family signature.;Dbxref=GeneID:1176758;gbkey=misc_feature;gene=oxyR
NC_003143.1	RefSeq	region	4398081	4398146	.	-	.	ID=id2853;Note=Predicted helix-turn-helix motif with score 1674 %28%2B4.89 SD%29 at aa 16-37%2C sequence RHFRRAADSCHVSQPTLSGQIR;Dbxref=GeneID:1176758;gbkey=misc_feature;gene=oxyR
NC_003143.1	RefSeq	gene	4398338	4399069	.	+	.	ID=gene3819;Name=YPO3916;Dbxref=GeneID:1176759;gbkey=Gene;locus_tag=YPO3916
NC_003143.1	RefSeq	CDS	4398338	4399069	.	+	0	ID=cds3614;Name=YP_002348791.1;Parent=gene3819;Dbxref=InterPro:IPR002109,InterPro:IPR011767,InterPro:IPR011906,InterPro:IPR012335,InterPro:IPR012336,InterPro:IPR013740,UniProtKB%2FTrEMBL:Q7CL11,Genbank:YP_002348791.1,GeneID:1176759;gbkey=CDS;product=peroxiredoxin%2Fglutaredoxin family protein;protein_id=YP_002348791.1;transl_table=11
NC_003143.1	RefSeq	region	4398860	4398910	.	+	.	ID=id2854;Note=PS00195 Glutaredoxin active site.;Dbxref=GeneID:1176759;gbkey=misc_feature
NC_003143.1	RefSeq	gene	4399164	4400627	.	+	.	ID=gene3820;Name=YPO3917;Dbxref=GeneID:1176760;gbkey=Gene;locus_tag=YPO3917
NC_003143.1	RefSeq	CDS	4399164	4400627	.	+	0	ID=cds3615;Name=YP_002348792.1;Parent=gene3820;Note=Catalyzes the oxidation of dihydrolipoamide to lipoamide;Dbxref=InterPro:IPR000815,InterPro:IPR001100,InterPro:IPR001327,InterPro:IPR004099,InterPro:IPR013027,UniProtKB%2FTrEMBL:Q7CL12,Genbank:YP_002348792.1,GeneID:1176760;gbkey=CDS;product=dihydrolipoamide dehydrogenase;protein_id=YP_002348792.1;transl_table=11
NC_003143.1	RefSeq	gene	4400743	4401546	.	-	.	ID=gene3821;Name=YPO3918;Dbxref=GeneID:1176761;gbkey=Gene;locus_tag=YPO3918
NC_003143.1	RefSeq	CDS	4400743	4401546	.	-	0	ID=cds3616;Name=YP_002348793.1;Parent=gene3821;Dbxref=InterPro:IPR006260,UniProtKB%2FTrEMBL:Q7CL13,Genbank:YP_002348793.1,GeneID:1176761;gbkey=CDS;product=hypothetical protein;protein_id=YP_002348793.1;transl_table=11
NC_003143.1	RefSeq	region	4401445	4401510	.	-	.	ID=id2855;Note=1 probable transmembrane helix predicted;Dbxref=GeneID:1176761;gbkey=misc_feature
NC_003143.1	RefSeq	gene	4401611	4402939	.	-	.	ID=gene3822;Name=YPO3919;Dbxref=GeneID:1176762;gbkey=Gene;locus_tag=YPO3919
NC_003143.1	RefSeq	CDS	4401611	4402939	.	-	0	ID=cds3617;Name=YP_002348794.1;Parent=gene3822;Dbxref=InterPro:IPR003997,InterPro:IPR006143,InterPro:IPR006144,InterPro:IPR010129,UniProtKB%2FTrEMBL:Q7CL14,Genbank:YP_002348794.1,GeneID:1176762;gbkey=CDS;product=HlyD family secretion protein;protein_id=YP_002348794.1;transl_table=11
NC_003143.1	RefSeq	region	4401656	4401724	.	-	.	ID=id2856;Note=PS00543 HlyD family secretion proteins signature.;Dbxref=GeneID:1176762;gbkey=misc_feature
NC_003143.1	RefSeq	region	4402796	4402861	.	-	.	ID=id2857;Note=1 probable transmembrane helix predicted;Dbxref=GeneID:1176762;gbkey=misc_feature
NC_003143.1	RefSeq	gene	4403015	4404823	.	-	.	ID=gene3823;Name=YPO3920;Dbxref=GeneID:1176763;gbkey=Gene;locus_tag=YPO3920
NC_003143.1	RefSeq	CDS	4403015	4404823	.	-	0	ID=cds3618;Name=YP_002348795.1;Parent=gene3823;Dbxref=InterPro:IPR003439,InterPro:IPR003593,InterPro:IPR010128,InterPro:IPR011527,UniProtKB%2FTrEMBL:Q0WA93,Genbank:YP_002348795.1,GeneID:1176763;gbkey=CDS;product=ABC transporter protein;protein_id=YP_002348795.1;transl_table=11
NC_003143.1	RefSeq	region	4403363	4403407	.	-	.	ID=id2858;Note=PS00211 ABC transporters family signature.;Dbxref=GeneID:1176763;gbkey=misc_feature
NC_003143.1	RefSeq	region	4403693	4403716	.	-	.	ID=id2859;Note=PS00017 ATP%2FGTP-binding site motif A %28P-loop%29.;Dbxref=GeneID:1176763;gbkey=misc_feature
NC_003143.1	RefSeq	gene	4404989	4405606	.	-	.	ID=gene3824;Name=YPO3922;Dbxref=GeneID:1176764;gbkey=Gene;locus_tag=YPO3922
NC_003143.1	RefSeq	CDS	4404989	4405606	.	-	0	ID=cds3619;Name=YP_002348796.1;Parent=gene3824;Dbxref=InterPro:IPR010495,UniProtKB%2FTrEMBL:Q7CL15,Genbank:YP_002348796.1,GeneID:1176764;gbkey=CDS;product=hemophore HasA;protein_id=YP_002348796.1;transl_table=11
NC_003143.1	RefSeq	region	4405217	4405240	.	-	.	ID=id2860;Note=PS00017 ATP%2FGTP-binding site motif A %28P-loop%29.;Dbxref=GeneID:1176764;gbkey=misc_feature
NC_003143.1	RefSeq	gene	4405828	4408320	.	-	.	ID=gene3825;Name=YPO3923;Dbxref=GeneID:1176765;gbkey=Gene;locus_tag=YPO3923
NC_003143.1	RefSeq	CDS	4405828	4408320	.	-	0	ID=cds3620;Name=YP_002348797.1;Parent=gene3825;Dbxref=InterPro:IPR000531,InterPro:IPR010949,InterPro:IPR011276,InterPro:IPR012910,UniProtKB%2FTrEMBL:Q7CL16,Genbank:YP_002348797.1,GeneID:1176765;gbkey=CDS;product=TonB dependent receptor protein;protein_id=YP_002348797.1;transl_table=11
NC_003143.1	RefSeq	gene	4408919	4410292	.	-	.	ID=gene3826;Name=argH;Dbxref=GeneID:1176766;gbkey=Gene;gene=argH;locus_tag=YPO3924
NC_003143.1	RefSeq	CDS	4408919	4410292	.	-	0	ID=cds3621;Name=YP_002348798.1;Parent=gene3826;Note=catalyzes the formation of arginine from %28N-L-arginino%29succinate;Dbxref=InterPro:IPR000362,InterPro:IPR003031,InterPro:IPR008948,InterPro:IPR009049,UniProtKB%2FTrEMBL:Q0WA90,Genbank:YP_002348798.1,GeneID:1176766;gbkey=CDS;gene=argH;product=argininosuccinate lyase;protein_id=YP_002348798.1;transl_table=11
NC_003143.1	RefSeq	region	4409438	4409467	.	-	.	ID=id2861;Note=PS00163 Fumarate lyases signature.;Dbxref=GeneID:1176766;gbkey=misc_feature;gene=argH
NC_003143.1	RefSeq	gene	4410459	4411232	.	-	.	ID=gene3827;Name=argB;Dbxref=GeneID:1176767;gbkey=Gene;gene=argB;locus_tag=YPO3925
NC_003143.1	RefSeq	CDS	4410459	4411232	.	-	0	ID=cds3622;Name=YP_002348799.1;Parent=gene3827;Note=catalyzes the phosphorylation of N-acetyl-L-glutamate to form N-acetyl-L-glutamate 5-phosphate;Dbxref=InterPro:IPR001048,InterPro:IPR004662,InterPro:IPR011148,UniProtKB%2FTrEMBL:Q0WA89,Genbank:YP_002348799.1,GeneID:1176767;gbkey=CDS;gene=argB;product=acetylglutamate kinase;protein_id=YP_002348799.1;transl_table=11
NC_003143.1	RefSeq	gene	4411401	4412405	.	-	.	ID=gene3828;Name=argC;Dbxref=GeneID:1176768;gbkey=Gene;gene=argC;locus_tag=YPO3927
NC_003143.1	RefSeq	CDS	4411401	4412405	.	-	0	ID=cds3623;Name=YP_002348800.1;Parent=gene3828;Note=catalyzes the reduction of N-acetyl-5-glutamyl phosphate to N-acetyl-L-glutamate 5-semialdehyde in arginine biosynthesis and the reduction of N-acetyl-gamma-aminoadipyl-phosphate to N-acetyl-L-aminoadipate-semialdehyde in lysine biosynthesis%3B involved in both the arginine and lysine biosynthetic pathways%3B lysine is produced via the AAA pathway%2C lysine from alpha-aminoadipate;Dbxref=InterPro:IPR000534,InterPro:IPR000706,InterPro:IPR006025,InterPro:IPR011137,InterPro:IPR012280,UniProtKB%2FTrEMBL:Q0WA88,Genbank:YP_002348800.1,GeneID:1176768;gbkey=CDS;gene=argC;product=N-acetyl-gamma-glutamyl-phosphate reductase;protein_id=YP_002348800.1;transl_table=11
NC_003143.1	RefSeq	region	4411911	4411961	.	-	.	ID=id2862;Note=PS01224 N-acetyl-gamma-glutamyl-phosphate reductase active site.;Dbxref=GeneID:1176768;gbkey=misc_feature;gene=argC
NC_003143.1	RefSeq	region	4412142	4412171	.	-	.	ID=id2863;Note=PS00142 Neutral zinc metallopeptidases%2C zinc-binding region signature.;Dbxref=GeneID:1176768;gbkey=misc_feature;gene=argC
NC_003143.1	RefSeq	gene	4412650	4413819	.	+	.	ID=gene3829;Name=argE;Dbxref=GeneID:1176769;gbkey=Gene;gene=argE;locus_tag=YPO3928
NC_003143.1	RefSeq	CDS	4412650	4413819	.	+	0	ID=cds3624;Name=YP_002348801.1;Parent=gene3829;Note=catalyzes the formation of L-ornithine from N%282%29-acetyl-L-ornithine in arginine biosynthesis;Dbxref=InterPro:IPR001261,InterPro:IPR002933,InterPro:IPR010169,InterPro:IPR011650,UniProtKB%2FTrEMBL:Q0WA87,Genbank:YP_002348801.1,GeneID:1176769;gbkey=CDS;gene=argE;product=acetylornithine deacetylase;protein_id=YP_002348801.1;transl_table=11
NC_003143.1	RefSeq	region	4412887	4412916	.	+	.	ID=id2864;Note=PS00758 ArgE %2F dapE %2F ACY1 %2F CPG2 %2F yscS family signature 1.;Dbxref=GeneID:1176769;gbkey=misc_feature;gene=argE
NC_003143.1	RefSeq	region	4412992	4413105	.	+	.	ID=id2865;Note=PS00759 ArgE %2F dapE %2F ACY1 %2F CPG2 %2F yscS family signature 2.;Dbxref=GeneID:1176769;gbkey=misc_feature;gene=argE
NC_003143.1	RefSeq	gene	4414193	4416829	.	+	.	ID=gene3830;Name=ppc;Dbxref=GeneID:1176770;gbkey=Gene;gene=ppc;locus_tag=YPO3929
NC_003143.1	RefSeq	CDS	4414193	4416829	.	+	0	ID=cds3625;Name=YP_002348802.1;Parent=gene3830;Note=catalyzes the formation of oxaloacetate from phosphoenolpyruvate;Dbxref=InterPro:IPR001449,UniProtKB%2FTrEMBL:Q0WA86,Genbank:YP_002348802.1,GeneID:1176770;gbkey=CDS;gene=ppc;product=phosphoenolpyruvate carboxylase;protein_id=YP_002348802.1;transl_table=11
NC_003143.1	RefSeq	region	4414589	4414624	.	+	.	ID=id2866;Note=PS00781 Phosphoenolpyruvate carboxylase active site 1.;Dbxref=GeneID:1176770;gbkey=misc_feature;gene=ppc
NC_003143.1	RefSeq	region	4415798	4415836	.	+	.	ID=id2867;Note=PS00393 Phosphoenolpyruvate carboxylase active site 2.;Dbxref=GeneID:1176770;gbkey=misc_feature;gene=ppc
NC_003143.1	RefSeq	gene	4417442	4418086	.	+	.	ID=gene3831;Name=YPO3931;Dbxref=GeneID:1176771;gbkey=Gene;locus_tag=YPO3931
NC_003143.1	RefSeq	CDS	4417442	4418086	.	+	0	ID=cds3626;Name=YP_002348803.2;Parent=gene3831;Dbxref=InterPro:IPR002514,InterPro:IPR009057,UniProtKB%2FTrEMBL:Q74RD6,Genbank:YP_002348803.2,GeneID:1176771;gbkey=CDS;product=insertion element IS1661 DNA-binding protein;protein_id=YP_002348803.2;transl_table=11
NC_003143.1	RefSeq	region	4417505	4418968	.	+	.	ID=id2868;Note=IS1397-like insertion element: IS1661;gbkey=misc_feature
NC_003143.1	RefSeq	repeat_region	4417505	4417538	.	+	.	ID=id2869;Note=Inverted repeat for IS1661 insertion element;Dbxref=GeneID:1176771;gbkey=repeat_region
NC_003143.1	RefSeq	region	4417628	4417693	.	+	.	ID=id2870;Note=Predicted helix-turn-helix motif with score 1691 %28%2B4.95 SD%29 at aa 20-41%2C sequence ATLRETARQFSVGKSPLTRWIR;Dbxref=GeneID:1176771;gbkey=misc_feature
NC_003143.1	RefSeq	gene	4418140	4418925	.	+	.	ID=gene3832;Name=YPO3932;Dbxref=GeneID:1176772;gbkey=Gene;locus_tag=YPO3932
NC_003143.1	RefSeq	CDS	4418140	4418925	.	+	0	ID=cds3627;Name=YP_002348804.1;Parent=gene3832;Dbxref=InterPro:IPR001584,InterPro:IPR012337,UniProtKB%2FTrEMBL:Q7CKI6,Genbank:YP_002348804.1,GeneID:1176772;gbkey=CDS;product=transposase for insertion sequence IS1661;protein_id=YP_002348804.1;transl_table=11
NC_003143.1	RefSeq	repeat_region	4418934	4418968	.	-	.	ID=id2871;Note=Inverted repeat for IS1661 insertion element;gbkey=repeat_region
NC_003143.1	RefSeq	repeat_region	4419711	4420226	.	-	.	ID=id2872;Note=Repeated sequence thought to encode a possible membrane protein with no database hits. This sequence is repeated at positions :3197462..3197890%2C 4366790..4367265%2C4367331..4367806%2C 4367872..4368406 and complement%284484307..4484653%29;gbkey=repeat_region
NC_003143.1	RefSeq	gene	4419714	4420178	.	-	.	ID=gene3833;Name=YPO3935;Dbxref=GeneID:1176774;gbkey=Gene;locus_tag=YPO3935
NC_003143.1	RefSeq	CDS	4419714	4420178	.	-	0	ID=cds3628;Name=YP_002348806.1;Parent=gene3833;Dbxref=InterPro:IPR010351,UniProtKB%2FTrEMBL:Q0WA82,Genbank:YP_002348806.1,GeneID:1176774;gbkey=CDS;product=hypothetical protein;protein_id=YP_002348806.1;transl_table=11
NC_003143.1	RefSeq	region	4420098	4420154	.	-	.	ID=id2873;Note=1 probable transmembrane helix predicted;Dbxref=GeneID:1176774;gbkey=misc_feature
NC_003143.1	RefSeq	gene	4421260	4422681	.	+	.	ID=gene3834;Name=glpD;Dbxref=GeneID:1176776;gbkey=Gene;gene=glpD;gene_synonym=glyD;locus_tag=YPO3937
NC_003143.1	RefSeq	CDS	4421260	4422681	.	+	0	ID=cds3629;Name=YP_002348808.1;Parent=gene3834;Note=in Escherichia coli this homodimeric enzyme is expressed under aerobic conditions%3B anaerobic expression is repressed by the arcAB system%3B converts sn-glycerol-3-phosphate and ubiquinone-8 to dihydroxy acetone phosphate and ubiquinol-8%3B associates with the cytoplasmic membrane;Dbxref=InterPro:IPR000447,InterPro:IPR006076,UniProtKB%2FTrEMBL:Q0WA80,Genbank:YP_002348808.1,GeneID:1176776;gbkey=CDS;gene=glpD;product=glycerol-3-phosphate dehydrogenase;protein_id=YP_002348808.1;transl_table=11
NC_003143.1	RefSeq	region	4422220	4422252	.	+	.	ID=id2874;Note=PS00978 FAD-dependent glycerol-3-phosphate dehydrogenase signature 2.;Dbxref=GeneID:1176776;gbkey=misc_feature;gene=glpD
NC_003143.1	RefSeq	gene	4422844	4425291	.	-	.	ID=gene3835;Name=glgP;Dbxref=GeneID:1176777;gbkey=Gene;gene=glgP;gene_synonym=glgY;locus_tag=YPO3938
NC_003143.1	RefSeq	CDS	4422844	4425291	.	-	0	ID=cds3630;Name=YP_002348809.1;Parent=gene3835;Dbxref=InterPro:IPR000811,InterPro:IPR011833,UniProtKB%2FTrEMBL:Q0WA79,Genbank:YP_002348809.1,GeneID:1176777;gbkey=CDS;gene=glgP;product=glycogen phosphorylase;protein_id=YP_002348809.1;transl_table=11
NC_003143.1	RefSeq	region	4423294	4423332	.	-	.	ID=id2875;Note=PS00102 Phosphorylase pyridoxal-phosphate attachment site.;Dbxref=GeneID:1176777;gbkey=misc_feature;gene=glgP
NC_003143.1	RefSeq	gene	4425460	4426890	.	-	.	ID=gene3836;Name=glgA;Dbxref=GeneID:1176778;gbkey=Gene;gene=glgA;locus_tag=YPO3939
NC_003143.1	RefSeq	CDS	4425460	4426890	.	-	0	ID=cds3631;Name=YP_002348810.1;Parent=gene3836;Note=catalyzes the formation of alpha-1%2C4-glucan chains from ADP-glucose;Dbxref=InterPro:IPR001296,InterPro:IPR011835,InterPro:IPR013534,UniProtKB%2FTrEMBL:Q0WA78,Genbank:YP_002348810.1,GeneID:1176778;gbkey=CDS;gene=glgA;product=glycogen synthase;protein_id=YP_002348810.1;transl_table=11
NC_003143.1	RefSeq	gene	4426958	4428388	.	-	.	ID=gene3837;Name=glgC;Dbxref=GeneID:1176779;gbkey=Gene;gene=glgC;locus_tag=YPO3940
NC_003143.1	RefSeq	CDS	4426958	4428388	.	-	0	ID=cds3632;Name=YP_002348811.1;Parent=gene3837;Note=catalyzes the formation of ADP-glucose and diphosphate from ATP and alpha-D-glucose 1-phosphate;Dbxref=InterPro:IPR005835,InterPro:IPR005836,InterPro:IPR011831,UniProtKB%2FTrEMBL:Q0WA77,Genbank:YP_002348811.1,GeneID:1176779;gbkey=CDS;gene=glgC;product=glucose-1-phosphate adenylyltransferase;protein_id=YP_002348811.1;transl_table=11
NC_003143.1	RefSeq	region	4427726	4427758	.	-	.	ID=id2876;Note=PS00810 ADP-glucose pyrophosphorylase signature 3.;Dbxref=GeneID:1176779;gbkey=misc_feature;gene=glgC
NC_003143.1	RefSeq	region	4428026	4428052	.	-	.	ID=id2877;Note=PS00809 ADP-glucose pyrophosphorylase signature 2.;Dbxref=GeneID:1176779;gbkey=misc_feature;gene=glgC
NC_003143.1	RefSeq	region	4428254	4428313	.	-	.	ID=id2878;Note=PS00808 ADP-glucose pyrophosphorylase signature 1.;Dbxref=GeneID:1176779;gbkey=misc_feature;gene=glgC
NC_003143.1	RefSeq	gene	4428398	4430386	.	-	.	ID=gene3838;Name=glgX;Dbxref=GeneID:1176780;gbkey=Gene;gene=glgX;locus_tag=YPO3941
NC_003143.1	RefSeq	CDS	4428398	4430386	.	-	0	ID=cds3633;Name=YP_002348812.1;Parent=gene3838;Note=catalyzes the hydrolysis of the alpha-1%2C6-glucosidic linkages in partially depolymerized glycogen;Dbxref=InterPro:IPR004193,InterPro:IPR006047,InterPro:IPR011837,InterPro:IPR013779,InterPro:IPR013780,InterPro:IPR013781,InterPro:IPR013783,UniProtKB%2FTrEMBL:Q0WA76,Genbank:YP_002348812.1,GeneID:1176780;gbkey=CDS;gene=glgX;product=glycogen debranching protein;protein_id=YP_002348812.1;transl_table=11
NC_003143.1	RefSeq	region	4429733	4429786	.	-	.	ID=id2879;Note=PS00062 Aldo%2Fketo reductase family signature 2.;Dbxref=GeneID:1176780;gbkey=misc_feature;gene=glgX
NC_003143.1	RefSeq	gene	4430388	4432571	.	-	.	ID=gene3839;Name=glgB;Dbxref=GeneID:1176781;gbkey=Gene;gene=glgB;locus_tag=YPO3942
NC_003143.1	RefSeq	CDS	4430388	4432571	.	-	0	ID=cds3634;Name=YP_002348813.1;Parent=gene3839;Note=catalyzes the transfer of a segment of a 1%2C4-alpha-D-glucan chain to a primary hydroxy group in a similar glucan chain;Dbxref=InterPro:IPR004193,InterPro:IPR006047,InterPro:IPR006048,InterPro:IPR006407,InterPro:IPR013781,InterPro:IPR013782,InterPro:IPR013783,UniProtKB%2FTrEMBL:Q0WA75,Genbank:YP_002348813.1,GeneID:1176781;gbkey=CDS;gene=glgB;product=glycogen branching protein;protein_id=YP_002348813.1;transl_table=11
NC_003143.1	RefSeq	gene	4433077	4434774	.	+	.	ID=gene3840;Name=YPO3943;Dbxref=GeneID:1176782;gbkey=Gene;locus_tag=YPO3943
NC_003143.1	RefSeq	CDS	4433077	4434774	.	+	0	ID=cds3635;Name=YP_002348814.1;Parent=gene3840;Dbxref=InterPro:IPR003018,InterPro:IPR003594,InterPro:IPR010559,InterPro:IPR011620,UniProtKB%2FTrEMBL:Q7CFY3,Genbank:YP_002348814.1,GeneID:1176782;gbkey=CDS;product=hypothetical protein;protein_id=YP_002348814.1;transl_table=11
NC_003143.1	RefSeq	gene	4434982	4444023	.	-	.	ID=gene3841;Name=YPO3944;Dbxref=GeneID:1176783;gbkey=Gene;locus_tag=YPO3944
NC_003143.1	RefSeq	CDS	4434982	4444023	.	-	0	ID=cds3636;Name=YP_002348815.1;Parent=gene3841;Dbxref=InterPro:IPR002482,InterPro:IPR003344,InterPro:IPR003535,InterPro:IPR008964,UniProtKB%2FTrEMBL:Q7CFY4,Genbank:YP_002348815.1,GeneID:1176783;gbkey=CDS;product=invasin;protein_id=YP_002348815.1;transl_table=11
NC_003143.1	RefSeq	region	4443847	4443912	.	-	.	ID=id2880;Note=1 probable transmembrane helix predicted;Dbxref=GeneID:1176783;gbkey=misc_feature
NC_003143.1	RefSeq	gene	4445759	4446046	.	-	.	ID=gene3842;Name=YPO3946;Dbxref=GeneID:1176785;gbkey=Gene;locus_tag=YPO3946
NC_003143.1	RefSeq	CDS	4445759	4446046	.	-	0	ID=cds3637;Name=YP_002348817.1;Parent=gene3842;Note=no significant database hits;Dbxref=UniProtKB%2FTrEMBL:Q7CFY6,Genbank:YP_002348817.1,GeneID:1176785;gbkey=CDS;product=hypothetical protein;protein_id=YP_002348817.1;transl_table=11
NC_003143.1	RefSeq	gene	4446053	4446427	.	-	.	ID=gene3843;Name=YPO3947;Dbxref=GeneID:1176786;gbkey=Gene;locus_tag=YPO3947
NC_003143.1	RefSeq	CDS	4446053	4446427	.	-	0	ID=cds3638;Name=YP_002348818.1;Parent=gene3843;Note=no significant database hits;Dbxref=UniProtKB%2FTrEMBL:Q7CFY7,Genbank:YP_002348818.1,GeneID:1176786;gbkey=CDS;product=hypothetical protein;protein_id=YP_002348818.1;transl_table=11
NC_003143.1	RefSeq	gene	4446668	4446949	.	-	.	ID=gene3844;Name=YPO3948;Dbxref=GeneID:1176787;gbkey=Gene;locus_tag=YPO3948
NC_003143.1	RefSeq	CDS	4446668	4446949	.	-	0	ID=cds3639;Name=YP_002348819.1;Parent=gene3844;Note=no significant database hits;Dbxref=UniProtKB%2FTrEMBL:Q74QZ2,Genbank:YP_002348819.1,GeneID:1176787;gbkey=CDS;product=hypothetical protein;protein_id=YP_002348819.1;transl_table=11
NC_003143.1	RefSeq	gene	4447118	4448221	.	-	.	ID=gene3845;Name=asd;Dbxref=GeneID:1176788;gbkey=Gene;gene=asd;locus_tag=YPO3949
NC_003143.1	RefSeq	CDS	4447118	4448221	.	-	0	ID=cds3640;Name=YP_002348820.1;Parent=gene3845;Note=catalyzes the formation of 4-aspartyl phosphate from aspartate 4-semialdehyde;Dbxref=InterPro:IPR000319,InterPro:IPR000534,InterPro:IPR011534,InterPro:IPR012080,InterPro:IPR012280,UniProtKB%2FTrEMBL:Q9ETB0,Genbank:YP_002348820.1,GeneID:1176788;gbkey=CDS;gene=asd;product=aspartate-semialdehyde dehydrogenase;protein_id=YP_002348820.1;transl_table=11
NC_003143.1	RefSeq	region	4447397	4447441	.	-	.	ID=id2881;Note=PS01103 Aspartate-semialdehyde dehydrogenase signature.;Dbxref=GeneID:1176788;gbkey=misc_feature;gene=asd
NC_003143.1	RefSeq	gene	4448588	4449172	.	+	.	ID=gene3846;Name=yhgN;Dbxref=GeneID:1176789;gbkey=Gene;gene=yhgN;locus_tag=YPO3950
NC_003143.1	RefSeq	CDS	4448588	4449172	.	+	0	ID=cds3641;Name=YP_002348821.1;Parent=gene3846;Note=YhgN%3B Ec0197%3B hydrolyzes nucleoside triphosphates with an O6 atom-containing purine base to nucleoside monophosphate and pyrophosphate%3B seems to play a role in the elimination of aberrant purine-derived nucleotides containing the 6-keto group%3B shows preference for deoxyinosine triphosphate and xanthosine triphosphate over standard nucleoside triphosphates %28dATP%2C dCTP%2C dGTP%2C and dTTP%29;Dbxref=InterPro:IPR002771,UniProtKB%2FTrEMBL:Q7CFY9,Genbank:YP_002348821.1,GeneID:1176789;gbkey=CDS;gene=yhgN;product=dITP- and XTP- hydrolase;protein_id=YP_002348821.1;transl_table=11
NC_003143.1	RefSeq	region	4449080	4449109	.	+	.	ID=id2882;Note=PS00339 Aminoacyl-transfer RNA synthetases class-II signature 2.;Dbxref=GeneID:1176789;gbkey=misc_feature;gene=yhgN
NC_003143.1	RefSeq	gene	4449412	4449816	.	-	.	ID=gene3847;Name=YPO3951;Dbxref=GeneID:1176790;gbkey=Gene;locus_tag=YPO3951
NC_003143.1	RefSeq	CDS	4449412	4449816	.	-	0	ID=cds3642;Name=YP_002348822.1;Parent=gene3847;Dbxref=UniProtKB%2FTrEMBL:Q7CFZ0,Genbank:YP_002348822.1,GeneID:1176790;gbkey=CDS;product=hypothetical protein;protein_id=YP_002348822.1;transl_table=11
NC_003143.1	RefSeq	gene	4450187	4450420	.	-	.	ID=gene3848;Name=YPO3952;Dbxref=GeneID:1176791;gbkey=Gene;locus_tag=YPO3952
NC_003143.1	RefSeq	CDS	4450187	4450420	.	-	0	ID=cds3643;Name=YP_002348823.1;Parent=gene3848;Note=no significant database hits to the full length CDS. Similar to the N-terminal regions of YPO0639 %2859.5%25 identity in 79 aa overlap%29 and YPO1258 %2859.5%25 identity in 79 aa overlap%29;Dbxref=UniProtKB%2FTrEMBL:Q7CFZ1,Genbank:YP_002348823.1,GeneID:1176791;gbkey=CDS;product=hypothetical protein;protein_id=YP_002348823.1;transl_table=11
NC_003143.1	RefSeq	gene	4450602	4451105	.	-	.	ID=gene3849;Name=YPO3953;Dbxref=GeneID:1176792;gbkey=Gene;locus_tag=YPO3953
NC_003143.1	RefSeq	CDS	4450602	4451105	.	-	0	ID=cds3644;Name=YP_002348824.1;Parent=gene3849;Dbxref=InterPro:IPR000623,InterPro:IPR006001,UniProtKB%2FTrEMBL:Q7CFZ2,Genbank:YP_002348824.1,GeneID:1176792;gbkey=CDS;product=gluconokinase;protein_id=YP_002348824.1;transl_table=11
NC_003143.1	RefSeq	region	4451055	4451078	.	-	.	ID=id2883;Note=PS00017 ATP%2FGTP-binding site motif A %28P-loop%29.;Dbxref=GeneID:1176792;gbkey=misc_feature
NC_003143.1	RefSeq	gene	4451322	4452638	.	+	.	ID=gene3850;Name=gntM;Dbxref=GeneID:1176793;gbkey=Gene;gene=gntM;gene_synonym=gntT,usgA;locus_tag=YPO3954
NC_003143.1	RefSeq	CDS	4451322	4452638	.	+	0	ID=cds3645;Name=YP_002348825.1;Parent=gene3850;Dbxref=InterPro:IPR003474,UniProtKB%2FTrEMBL:Q7CFZ3,Genbank:YP_002348825.1,GeneID:1176793;gbkey=CDS;gene=gntM;product=gluconate permease;protein_id=YP_002348825.1;transl_table=11
NC_003143.1	RefSeq	gene	4452730	4453725	.	-	.	ID=gene3851;Name=gntR;Dbxref=GeneID:1176794;gbkey=Gene;gene=gntR;locus_tag=YPO3955
NC_003143.1	RefSeq	CDS	4452730	4453725	.	-	0	ID=cds3646;Name=YP_002348826.1;Parent=gene3851;Dbxref=InterPro:IPR000843,InterPro:IPR001761,InterPro:IPR010982,UniProtKB%2FTrEMBL:Q7CFZ4,Genbank:YP_002348826.1,GeneID:1176794;gbkey=CDS;gene=gntR;product=gluconate utilization system Gnt-I transcriptional repressor;protein_id=YP_002348826.1;transl_table=11
NC_003143.1	RefSeq	region	4453648	4453704	.	-	.	ID=id2884;Note=PS00356 Bacterial regulatory proteins%2C lacI family signature.;Dbxref=GeneID:1176794;gbkey=misc_feature;gene=gntR
NC_003143.1	RefSeq	gene	4453854	4454549	.	-	.	ID=gene3852;Name=YPO3956;Dbxref=GeneID:1176795;gbkey=Gene;locus_tag=YPO3956
NC_003143.1	RefSeq	CDS	4453854	4454549	.	-	0	ID=cds3647;Name=YP_002348827.1;Parent=gene3852;Dbxref=InterPro:IPR003829,InterPro:IPR011051,InterPro:IPR012093,UniProtKB%2FTrEMBL:Q7CFZ5,Genbank:YP_002348827.1,GeneID:1176795;gbkey=CDS;product=hypothetical protein;protein_id=YP_002348827.1;transl_table=11
NC_003143.1	RefSeq	gene	4455044	4455313	.	+	.	ID=gene3853;Name=YPO3957;Dbxref=GeneID:1176796;gbkey=Gene;locus_tag=YPO3957
NC_003143.1	RefSeq	CDS	4455044	4455313	.	+	0	ID=cds3648;Name=YP_002348828.1;Parent=gene3853;Note=no significant database hits;Dbxref=UniProtKB%2FTrEMBL:Q74QY2,Genbank:YP_002348828.1,GeneID:1176796;gbkey=CDS;product=hypothetical protein;protein_id=YP_002348828.1;transl_table=11
NC_003143.1	RefSeq	gene	4455313	4456050	.	+	.	ID=gene3854;Name=YPO3958;Dbxref=GeneID:1176797;gbkey=Gene;locus_tag=YPO3958
NC_003143.1	RefSeq	CDS	4455313	4456050	.	+	0	ID=cds3649;Name=YP_002348829.1;Parent=gene3854;Dbxref=InterPro:IPR001789,InterPro:IPR001867,InterPro:IPR011006,InterPro:IPR011991,UniProtKB%2FTrEMBL:Q7CFZ6,Genbank:YP_002348829.1,GeneID:1176797;gbkey=CDS;product=response regulator protein;protein_id=YP_002348829.1;transl_table=11
NC_003143.1	RefSeq	gene	4456235	4457242	.	-	.	ID=gene3855;Name=YPO3959;Dbxref=GeneID:1176798;gbkey=Gene;locus_tag=YPO3959
NC_003143.1	RefSeq	CDS	4456235	4457242	.	-	0	ID=cds3650;Name=YP_002348830.1;Parent=gene3855;Dbxref=InterPro:IPR011611,UniProtKB%2FTrEMBL:Q74QY0,Genbank:YP_002348830.1,GeneID:1176798;gbkey=CDS;product=PfkB family carbohydrate kinase;protein_id=YP_002348830.1;transl_table=11
NC_003143.1	RefSeq	gene	4457252	4458112	.	-	.	ID=gene3856;Name=YPO3960;Dbxref=GeneID:1176799;gbkey=Gene;locus_tag=YPO3960
NC_003143.1	RefSeq	CDS	4457252	4458112	.	-	0	ID=cds3651;Name=YP_002348831.1;Parent=gene3856;Dbxref=InterPro:IPR000771,UniProtKB%2FTrEMBL:Q0WA57,Genbank:YP_002348831.1,GeneID:1176799;gbkey=CDS;product=hypothetical protein;protein_id=YP_002348831.1;transl_table=11
NC_003143.1	RefSeq	region	4457687	4457722	.	-	.	ID=id2885;Note=PS00806 Fructose-bisphosphate aldolase class-II signature 2.;Dbxref=GeneID:1176799;gbkey=misc_feature
NC_003143.1	RefSeq	gene	4458138	4458821	.	-	.	ID=gene3857;Name=YPO3961;Dbxref=GeneID:1176800;gbkey=Gene;locus_tag=YPO3961
NC_003143.1	RefSeq	CDS	4458138	4458821	.	-	0	ID=cds3652;Name=YP_002348832.1;Parent=gene3857;Dbxref=InterPro:IPR010864,UniProtKB%2FTrEMBL:Q7CFZ7,Genbank:YP_002348832.1,GeneID:1176800;gbkey=CDS;product=hypothetical protein;protein_id=YP_002348832.1;transl_table=11
NC_003143.1	RefSeq	gene	4458896	4459840	.	-	.	ID=gene3858;Name=YPO3962;Dbxref=GeneID:1176801;gbkey=Gene;locus_tag=YPO3962
NC_003143.1	RefSeq	CDS	4458896	4459840	.	-	0	ID=cds3653;Name=YP_002348833.1;Parent=gene3858;Dbxref=InterPro:IPR001761,UniProtKB%2FTrEMBL:Q7CFZ8,Genbank:YP_002348833.1,GeneID:1176801;gbkey=CDS;product=sugar-binding transport protein;protein_id=YP_002348833.1;transl_table=11
NC_003143.1	RefSeq	gene	4459871	4460863	.	-	.	ID=gene3859;Name=YPO3963;Dbxref=GeneID:1176802;gbkey=Gene;locus_tag=YPO3963
NC_003143.1	RefSeq	CDS	4459871	4460863	.	-	0	ID=cds3654;Name=YP_002348834.1;Parent=gene3859;Dbxref=InterPro:IPR001851,UniProtKB%2FTrEMBL:Q7CFZ9,Genbank:YP_002348834.1,GeneID:1176802;gbkey=CDS;product=sugar transport system permease;protein_id=YP_002348834.1;transl_table=11
NC_003143.1	RefSeq	gene	4460856	4462379	.	-	.	ID=gene3860;Name=YPO3964;Dbxref=GeneID:1176803;gbkey=Gene;locus_tag=YPO3964
NC_003143.1	RefSeq	CDS	4460856	4462379	.	-	0	ID=cds3655;Name=YP_002348835.1;Parent=gene3860;Dbxref=UniProtKB%2FTrEMBL:Q7CG00,Genbank:YP_002348835.1,GeneID:1176803;gbkey=CDS;product=sugar transport ATP-binding protein;protein_id=YP_002348835.1;transl_table=11
NC_003143.1	RefSeq	region	4461144	4461188	.	-	.	ID=id2886;Note=PS00211 ABC transporters family signature.;Dbxref=GeneID:1176803;gbkey=misc_feature
NC_003143.1	RefSeq	region	4462242	4462265	.	-	.	ID=id2887;Note=PS00017 ATP%2FGTP-binding site motif A %28P-loop%29.;Dbxref=GeneID:1176803;gbkey=misc_feature
NC_003143.1	RefSeq	gene	4462568	4465123	.	+	.	ID=gene3861;Name=YPO3965;Dbxref=GeneID:1176804;gbkey=Gene;locus_tag=YPO3965
NC_003143.1	RefSeq	CDS	4462568	4465123	.	+	0	ID=cds3656;Name=YP_002348836.1;Parent=gene3861;Dbxref=InterPro:IPR000014,InterPro:IPR001789,InterPro:IPR003594,InterPro:IPR003660,InterPro:IPR003661,InterPro:IPR004358,InterPro:IPR005467,InterPro:IPR009082,InterPro:IPR011006,InterPro:IPR013656,UniProtKB%2FTrEMBL:Q7CG01,Genbank:YP_002348836.1,GeneID:1176804;gbkey=CDS;product=hybrid two-component system regulatory protein;protein_id=YP_002348836.1;transl_table=11
NC_003143.1	RefSeq	gene	4465259	4466455	.	-	.	ID=gene3862;Name=YPO3966;Dbxref=GeneID:1176805;gbkey=Gene;locus_tag=YPO3966
NC_003143.1	RefSeq	CDS	4465259	4466455	.	-	0	ID=cds3657;Name=YP_002348837.1;Parent=gene3862;Dbxref=InterPro:IPR000568,InterPro:IPR001100,InterPro:IPR004792,InterPro:IPR013027,UniProtKB%2FTrEMBL:Q0WA51,Genbank:YP_002348837.1,GeneID:1176805;gbkey=CDS;product=hypothetical protein;protein_id=YP_002348837.1;transl_table=11
NC_003143.1	RefSeq	region	4466063	4466092	.	-	.	ID=id2888;Note=PS00449 ATP synthase a subunit signature.;Dbxref=GeneID:1176805;gbkey=misc_feature
NC_003143.1	RefSeq	gene	4466766	4468262	.	+	.	ID=gene3863;Name=YPO3967;Dbxref=GeneID:1176806;gbkey=Gene;locus_tag=YPO3967
NC_003143.1	RefSeq	CDS	4466766	4468262	.	+	0	ID=cds3658;Name=YP_002348838.1;Parent=gene3863;Dbxref=InterPro:IPR001204,InterPro:IPR006162,UniProtKB%2FTrEMBL:Q0WA50,Genbank:YP_002348838.1,GeneID:1176806;gbkey=CDS;product=phosphate transport protein;protein_id=YP_002348838.1;transl_table=11
NC_003143.1	RefSeq	region	4467018	4467065	.	+	.	ID=id2889;Note=PS00012 Phosphopantetheine attachment site.;Dbxref=GeneID:1176806;gbkey=misc_feature
NC_003143.1	RefSeq	repeat_region	4468383	4469094	.	+	.	ID=id2890;Note=Contains a %27A%27 at nucleotide position 315%7EIS200-like insertion sequence:IS1541;gbkey=repeat_region
NC_003143.1	RefSeq	gene	4468528	4468986	.	+	.	ID=gene3864;Name=tnp;Dbxref=GeneID:1176807;gbkey=Gene;gene=tnp;locus_tag=YPO3968
NC_003143.1	RefSeq	CDS	4468528	4468986	.	+	0	ID=cds3659;Name=YP_002348839.1;Parent=gene3864;Dbxref=InterPro:IPR002686,UniProtKB%2FTrEMBL:Q56938,Genbank:YP_002348839.1,GeneID:1176807;gbkey=CDS;gene=tnp;product=transposase for the IS1541 insertion element;protein_id=YP_002348839.1;transl_table=11
NC_003143.1	RefSeq	gene	4469119	4469454	.	-	.	ID=gene3865;Name=uspB;Dbxref=GeneID:1176808;gbkey=Gene;gene=uspB;locus_tag=YPO3969
NC_003143.1	RefSeq	CDS	4469119	4469454	.	-	0	ID=cds3660;Name=YP_002348840.1;Parent=gene3865;Note=ppGpp-dependent%2C membrane associated%2C stress protein produced under conditions of nutrient deprivation%2C osmotic shock and oxidative stress;Dbxref=UniProtKB%2FTrEMBL:Q0WA48,Genbank:YP_002348840.1,GeneID:1176808;gbkey=CDS;gene=uspB;product=universal stress protein UspB;protein_id=YP_002348840.1;transl_table=11
NC_003143.1	RefSeq	gene	4470162	4470608	.	+	.	ID=gene3866;Name=uspA;Dbxref=GeneID:1176809;gbkey=Gene;gene=uspA;locus_tag=YPO3970
NC_003143.1	RefSeq	CDS	4470162	4470608	.	+	0	ID=cds3661;Name=YP_002348841.1;Parent=gene3866;Dbxref=InterPro:IPR006016,UniProtKB%2FTrEMBL:Q0WA47,Genbank:YP_002348841.1,GeneID:1176809;gbkey=CDS;gene=uspA;product=universal stress protein A;protein_id=YP_002348841.1;transl_table=11
NC_003143.1	RefSeq	gene	4470855	4472198	.	+	.	ID=gene3867;Name=gdhA;Dbxref=GeneID:1176810;gbkey=Gene;gene=gdhA;locus_tag=YPO3971
NC_003143.1	RefSeq	CDS	4470855	4472198	.	+	0	ID=cds3662;Name=YP_002348842.1;Parent=gene3867;Note=converts 2-oxoglutarate to glutamate%3B in Escherichia coli this enzyme plays a role in glutamate synthesis when the cell is under energy restriction%3B uses NADPH%3B forms a homohexamer;Dbxref=InterPro:IPR006095,InterPro:IPR006096,InterPro:IPR006097,UniProtKB%2FTrEMBL:Q0WA46,Genbank:YP_002348842.1,GeneID:1176810;gbkey=CDS;gene=gdhA;product=glutamate dehydrogenase;protein_id=YP_002348842.1;transl_table=11
NC_003143.1	RefSeq	region	4471218	4471259	.	+	.	ID=id2891;Note=PS00074 Glu %2F Leu %2F Phe %2F Val dehydrogenases active site.;Dbxref=GeneID:1176810;gbkey=misc_feature;gene=gdhA
NC_003143.1	RefSeq	gene	4472443	4473780	.	+	.	ID=gene3868;Name=YPO3973;Dbxref=GeneID:1176811;gbkey=Gene;locus_tag=YPO3973
NC_003143.1	RefSeq	CDS	4472443	4473780	.	+	0	ID=cds3663;Name=YP_002348843.1;Parent=gene3868;Dbxref=InterPro:IPR001343,InterPro:IPR001818,InterPro:IPR006025,InterPro:IPR006026,InterPro:IPR011049,InterPro:IPR013858,UniProtKB%2FTrEMBL:Q7CG03,Genbank:YP_002348843.1,GeneID:1176811;gbkey=CDS;product=metalloprotease;protein_id=YP_002348843.1;transl_table=11
NC_003143.1	RefSeq	region	4472932	4472961	.	+	.	ID=id2892;Note=PS00142 Neutral zinc metallopeptidases%2C zinc-binding region signature.;Dbxref=GeneID:1176811;gbkey=misc_feature
NC_003143.1	RefSeq	gene	4473845	4474615	.	-	.	ID=gene3869;Name=YPO3974;Dbxref=GeneID:1176812;gbkey=Gene;locus_tag=YPO3974
NC_003143.1	RefSeq	CDS	4473845	4474615	.	-	0	ID=cds3664;Name=YP_002348844.1;Parent=gene3869;Note=predicted SAM-dependent methyltransferase;Dbxref=InterPro:IPR007536,UniProtKB%2FTrEMBL:Q0WA44,Genbank:YP_002348844.1,GeneID:1176812;gbkey=CDS;product=methyltransferase;protein_id=YP_002348844.1;transl_table=11
NC_003143.1	RefSeq	gene	4474619	4476661	.	-	.	ID=gene3870;Name=opdA;Dbxref=GeneID:1176813;gbkey=Gene;gene=opdA;gene_synonym=prlC;locus_tag=YPO3975
NC_003143.1	RefSeq	CDS	4474619	4476661	.	-	0	ID=cds3665;Name=YP_002348845.1;Parent=gene3870;Dbxref=InterPro:IPR001567,InterPro:IPR006025,UniProtKB%2FTrEMBL:Q7CG05,Genbank:YP_002348845.1,GeneID:1176813;gbkey=CDS;gene=opdA;product=oligopeptidase A;protein_id=YP_002348845.1;transl_table=11
NC_003143.1	RefSeq	region	4475237	4475266	.	-	.	ID=id2893;Note=PS00142 Neutral zinc metallopeptidases%2C zinc-binding region signature.;Dbxref=GeneID:1176813;gbkey=misc_feature;gene=opdA
NC_003143.1	RefSeq	gene	4476990	4477832	.	+	.	ID=gene3871;Name=YPO3976;Dbxref=GeneID:1176814;gbkey=Gene;locus_tag=YPO3976
NC_003143.1	RefSeq	CDS	4476990	4477832	.	+	0	ID=cds3666;Name=YP_002348846.1;Parent=gene3871;Dbxref=InterPro:IPR002052,InterPro:IPR007473,UniProtKB%2FTrEMBL:Q7CG06,Genbank:YP_002348846.1,GeneID:1176814;gbkey=CDS;product=hypothetical protein;protein_id=YP_002348846.1;transl_table=11
NC_003143.1	RefSeq	region	4477470	4477490	.	+	.	ID=id2894;Note=PS00092 N-6 Adenine-specific DNA methylases signature.;Dbxref=GeneID:1176814;gbkey=misc_feature
NC_003143.1	RefSeq	region	4477710	4477730	.	+	.	ID=id2895;Note=PS00092 N-6 Adenine-specific DNA methylases signature.;Dbxref=GeneID:1176814;gbkey=misc_feature
NC_003143.1	RefSeq	gene	4478018	4479370	.	+	.	ID=gene3872;Name=gor;Dbxref=GeneID:1176815;gbkey=Gene;gene=gor;locus_tag=YPO3977
NC_003143.1	RefSeq	CDS	4478018	4479370	.	+	0	ID=cds3667;Name=YP_002348847.1;Parent=gene3872;Note=catalyzes the reduction of 2 glutathione to glutathione disulfide%3B maintains high levels of reduced glutathione in the cytosol%3B involved in redox regulation and oxidative defense;Dbxref=InterPro:IPR000815,InterPro:IPR001100,InterPro:IPR001327,InterPro:IPR004099,InterPro:IPR006322,InterPro:IPR012999,InterPro:IPR013027,UniProtKB%2FTrEMBL:Q0WA41,Genbank:YP_002348847.1,GeneID:1176815;gbkey=CDS;gene=gor;product=glutathione reductase;protein_id=YP_002348847.1;transl_table=11
NC_003143.1	RefSeq	region	4478132	4478164	.	+	.	ID=id2896;Note=PS00076 Pyridine nucleotide-disulphide oxidoreductases class-I active site.;Dbxref=GeneID:1176815;gbkey=misc_feature;gene=gor
NC_003143.1	RefSeq	gene	4479562	4480689	.	+	.	ID=gene3873;Name=YPO3978;Dbxref=GeneID:1176816;gbkey=Gene;locus_tag=YPO3978
NC_003143.1	RefSeq	CDS	4479562	4480689	.	+	0	ID=cds3668;Name=YP_002348848.1;Parent=gene3873;Dbxref=InterPro:IPR008599,InterPro:IPR009057,UniProtKB%2FTrEMBL:Q7CG07,Genbank:YP_002348848.1,GeneID:1176816;gbkey=CDS;product=regulatory protein;protein_id=YP_002348848.1;transl_table=11
NC_003143.1	RefSeq	region	4480540	4480605	.	+	.	ID=id2897;Note=Predicted helix-turn-helix motif with score 1201 %28%2B3.28 SD%29 at aa 327-348%2C sequence CDLSQTSKQLHIHVNTLRYRLQ;Dbxref=GeneID:1176816;gbkey=misc_feature
NC_003143.1	RefSeq	gene	4480867	4482135	.	+	.	ID=gene3874;Name=YPO3979;Dbxref=GeneID:1176817;gbkey=Gene;locus_tag=YPO3979
NC_003143.1	RefSeq	CDS	4480867	4482135	.	+	0	ID=cds3669;Name=YP_002348849.1;Parent=gene3874;Dbxref=InterPro:IPR004680,UniProtKB%2FTrEMBL:Q7CG08,Genbank:YP_002348849.1,GeneID:1176817;gbkey=CDS;product=GntP family permease;protein_id=YP_002348849.1;transl_table=11
NC_003143.1	RefSeq	gene	4482146	4483282	.	+	.	ID=gene3875;Name=glxK;Dbxref=GeneID:1176818;gbkey=Gene;gene=glxK;locus_tag=YPO3980
NC_003143.1	RefSeq	CDS	4482146	4483282	.	+	0	ID=cds3670;Name=YP_002348850.1;Parent=gene3875;Dbxref=InterPro:IPR004381,UniProtKB%2FTrEMBL:Q7CG09,Genbank:YP_002348850.1,GeneID:1176818;gbkey=CDS;gene=glxK;product=glycerate kinase;protein_id=YP_002348850.1;transl_table=11
NC_003143.1	RefSeq	gene	4483528	4484034	.	-	.	ID=gene3876;Name=YPO3981;Dbxref=GeneID:1176819;gbkey=Gene;locus_tag=YPO3981
NC_003143.1	RefSeq	CDS	4483528	4484034	.	-	0	ID=cds3671;Name=YP_002348851.1;Parent=gene3876;Note=No significant database matches. Similar to YPO3982 %2860.7%25 identity in 168 aa overlap%29;Dbxref=InterPro:IPR002048,InterPro:IPR010351,UniProtKB%2FTrEMBL:Q7CG10,Genbank:YP_002348851.1,GeneID:1176819;gbkey=CDS;product=hypothetical protein;protein_id=YP_002348851.1;transl_table=11
NC_003143.1	RefSeq	region	4483672	4483710	.	-	.	ID=id2898;Note=PS00018 EF-hand calcium-binding domain.;Dbxref=GeneID:1176819;gbkey=misc_feature
NC_003143.1	RefSeq	gene	4484102	4484599	.	-	.	ID=gene3877;Name=YPO3982;Dbxref=GeneID:1176820;gbkey=Gene;locus_tag=YPO3982
NC_003143.1	RefSeq	CDS	4484102	4484599	.	-	0	ID=cds3672;Name=YP_002348852.1;Parent=gene3877;Dbxref=InterPro:IPR010351,UniProtKB%2FTrEMBL:Q7CG11,Genbank:YP_002348852.1,GeneID:1176820;gbkey=CDS;product=hypothetical protein;protein_id=YP_002348852.1;transl_table=11
NC_003143.1	RefSeq	repeat_region	4484307	4484653	.	-	.	ID=id2899;Note=Repeated sequence thought to encode a possible membrane protein with no database hits. This sequence is a partial repeat of the sequences at positions :3197462..3197890%2C 4366790..4367265%2C 4367331..4367806%2C4367872..4368406 and complement%284419711..4420226%29;gbkey=repeat_region
NC_003143.1	RefSeq	gene	4484601	4485470	.	-	.	ID=gene3878;Name=YPO3983;Dbxref=GeneID:1176821;gbkey=Gene;locus_tag=YPO3983
NC_003143.1	RefSeq	CDS	4484601	4485470	.	-	0	ID=cds3673;Name=YP_002348853.1;Parent=gene3878;Dbxref=UniProtKB%2FTrEMBL:Q7CG12,Genbank:YP_002348853.1,GeneID:1176821;gbkey=CDS;product=hypothetical protein;protein_id=YP_002348853.1;transl_table=11
NC_003143.1	RefSeq	gene	4485558	4488770	.	-	.	ID=gene3879;Name=yapE;Dbxref=GeneID:1176822;gbkey=Gene;gene=yapE;locus_tag=YPO3984
NC_003143.1	RefSeq	CDS	4485558	4488770	.	-	0	ID=cds3674;Name=YP_002348854.1;Parent=gene3879;Dbxref=InterPro:IPR004899,InterPro:IPR005546,InterPro:IPR006315,InterPro:IPR006626,InterPro:IPR011050,UniProtKB%2FTrEMBL:Q0WA34,Genbank:YP_002348854.1,GeneID:1176822;gbkey=CDS;gene=yapE;product=autotransporter protein;protein_id=YP_002348854.1;transl_table=11
NC_003143.1	RefSeq	gene	4489448	4490530	.	+	.	ID=gene3880;Name=YPO3985;Dbxref=GeneID:1176823;gbkey=Gene;locus_tag=YPO3985
NC_003143.1	RefSeq	CDS	4489448	4490530	.	+	0	ID=cds3675;Name=YP_002348855.1;Parent=gene3880;Dbxref=InterPro:IPR004664,InterPro:IPR005274,UniProtKB%2FTrEMBL:Q7CG13,Genbank:YP_002348855.1,GeneID:1176823;gbkey=CDS;product=hypothetical protein;protein_id=YP_002348855.1;transl_table=11
NC_003143.1	RefSeq	gene	4490555	4491331	.	+	.	ID=gene3881;Name=cdh;Dbxref=GeneID:1176824;gbkey=Gene;gene=cdh;locus_tag=YPO3986
NC_003143.1	RefSeq	CDS	4490555	4491331	.	+	0	ID=cds3676;Name=YP_002348856.1;Parent=gene3881;Dbxref=InterPro:IPR003763,UniProtKB%2FTrEMBL:Q0WA32,Genbank:YP_002348856.1,GeneID:1176824;gbkey=CDS;gene=cdh;product=CDP-diacylglycerol pyrophosphatase;protein_id=YP_002348856.1;transl_table=11
NC_003143.1	RefSeq	gene	4491308	4493530	.	-	.	ID=gene3882;Name=cdh;Dbxref=GeneID:1176825;gbkey=Gene;gene=cdh;locus_tag=YPO3987
NC_003143.1	RefSeq	CDS	4491308	4493530	.	-	0	ID=cds3677;Name=YP_002348857.1;Parent=gene3882;Dbxref=InterPro:IPR007844,UniProtKB%2FTrEMBL:Q0WA31,Genbank:YP_002348857.1,GeneID:1176825;gbkey=CDS;product=hypothetical protein;protein_id=YP_002348857.1;transl_table=11
NC_003143.1	RefSeq	gene	4493835	4494665	.	-	.	ID=gene3883;Name=YPO3988;Dbxref=GeneID:1176826;gbkey=Gene;locus_tag=YPO3988
NC_003143.1	RefSeq	CDS	4493835	4494665	.	-	0	ID=cds3678;Name=YP_002348858.1;Parent=gene3883;Note=in Escherichia coli this protein is involved in flagellar function;Dbxref=InterPro:IPR001633,UniProtKB%2FTrEMBL:Q0WA30,Genbank:YP_002348858.1,GeneID:1176826;gbkey=CDS;product=diguanylate phosphodiesterase;protein_id=YP_002348858.1;transl_table=11
NC_003143.1	RefSeq	gene	4494899	4495099	.	+	.	ID=gene3884;Name=YPO3989;Dbxref=GeneID:1176827;gbkey=Gene;locus_tag=YPO3989
NC_003143.1	RefSeq	CDS	4494899	4495099	.	+	0	ID=cds3679;Name=YP_002348859.1;Parent=gene3884;Dbxref=InterPro:IPR004370,UniProtKB%2FTrEMBL:Q0WA29,Genbank:YP_002348859.1,GeneID:1176827;gbkey=CDS;product=tautomerase;protein_id=YP_002348859.1;transl_table=11
NC_003143.1	RefSeq	gene	4495378	4496322	.	+	.	ID=gene3885;Name=kdgK;Dbxref=GeneID:1176828;gbkey=Gene;gene=kdgK;locus_tag=YPO3990
NC_003143.1	RefSeq	CDS	4495378	4496322	.	+	0	ID=cds3680;Name=YP_002348860.1;Parent=gene3885;Dbxref=InterPro:IPR002173,InterPro:IPR011611,UniProtKB%2FTrEMBL:Q7CG14,Genbank:YP_002348860.1,GeneID:1176828;gbkey=CDS;gene=kdgK;product=2-dehydro-3-deoxygluconokinase;protein_id=YP_002348860.1;transl_table=11
NC_003143.1	RefSeq	region	4496161	4496202	.	+	.	ID=id2900;Note=PS00584 pfkB family of carbohydrate kinases signature 2.;Dbxref=GeneID:1176828;gbkey=misc_feature;gene=kdgK
NC_003143.1	RefSeq	gene	4496486	4497985	.	-	.	ID=gene3886;Name=YPO3991;Dbxref=GeneID:1176829;gbkey=Gene;locus_tag=YPO3991
NC_003143.1	RefSeq	CDS	4496486	4497985	.	-	0	ID=cds3681;Name=YP_002348861.1;Parent=gene3886;Dbxref=InterPro:IPR007863,InterPro:IPR011765,UniProtKB%2FTrEMBL:Q7CG15,Genbank:YP_002348861.1,GeneID:1176829;gbkey=CDS;product=insulinase family protease;protein_id=YP_002348861.1;transl_table=11
NC_003143.1	RefSeq	gene	4498350	4499639	.	-	.	ID=gene3887;Name=dctA;Dbxref=GeneID:1176830;gbkey=Gene;gene=dctA;locus_tag=YPO3992
NC_003143.1	RefSeq	CDS	4498350	4499639	.	-	0	ID=cds3682;Name=YP_002348862.1;Parent=gene3887;Note=involved in the transport of C4-dicarboxylates across the membrane;Dbxref=InterPro:IPR001991,UniProtKB%2FTrEMBL:Q0WA26,Genbank:YP_002348862.1,GeneID:1176830;gbkey=CDS;gene=dctA;product=C4-dicarboxylate transporter DctA;protein_id=YP_002348862.1;transl_table=11
NC_003143.1	RefSeq	region	4498686	4498757	.	-	.	ID=id2901;Note=PS00714 Sodium:dicarboxylate symporter family signature 2.;Dbxref=GeneID:1176830;gbkey=misc_feature;gene=dctA
NC_003143.1	RefSeq	region	4499487	4499534	.	-	.	ID=id2902;Note=PS00713 Sodium:dicarboxylate symporter family signature 1.;Dbxref=GeneID:1176830;gbkey=misc_feature;gene=dctA
NC_003143.1	RefSeq	gene	4500094	4500573	.	-	.	ID=gene3888;Name=YPO3993;Dbxref=GeneID:1176831;gbkey=Gene;locus_tag=YPO3993
NC_003143.1	RefSeq	CDS	4500094	4500573	.	-	0	ID=cds3683;Name=YP_002348863.1;Parent=gene3888;Dbxref=InterPro:IPR000421,InterPro:IPR008979,UniProtKB%2FTrEMBL:Q0WA25,Genbank:YP_002348863.1,GeneID:1176831;gbkey=CDS;product=hypothetical protein;protein_id=YP_002348863.1;transl_table=11
NC_003143.1	RefSeq	region	4500283	4500306	.	-	.	ID=id2903;Note=PS00017 ATP%2FGTP-binding site motif A %28P-loop%29.;Dbxref=GeneID:1176831;gbkey=misc_feature
NC_003143.1	RefSeq	gene	4500698	4502416	.	-	.	ID=gene3889;Name=pelY;Dbxref=GeneID:1176832;gbkey=Gene;gene=pelY;locus_tag=YPO3994
NC_003143.1	RefSeq	CDS	4500698	4502416	.	-	0	ID=cds3684;Name=YP_002348864.1;Parent=gene3889;Dbxref=InterPro:IPR008928,InterPro:IPR010702,UniProtKB%2FTrEMBL:Q7CG16,Genbank:YP_002348864.1,GeneID:1176832;gbkey=CDS;gene=pelY;product=periplasmic pectate lyase;protein_id=YP_002348864.1;transl_table=11
NC_003143.1	RefSeq	gene	4502662	4503366	.	-	.	ID=gene3890;Name=YPO3995;Dbxref=GeneID:1176833;gbkey=Gene;locus_tag=YPO3995
NC_003143.1	RefSeq	CDS	4502662	4503366	.	-	0	ID=cds3685;Name=YP_002348865.1;Parent=gene3890;Dbxref=InterPro:IPR009331,UniProtKB%2FTrEMBL:Q7CG17,Genbank:YP_002348865.1,GeneID:1176833;gbkey=CDS;product=hypothetical protein;protein_id=YP_002348865.1;transl_table=11
NC_003143.1	RefSeq	gene	4504006	4506192	.	-	.	ID=gene3891;Name=yhjK;Dbxref=GeneID:1176834;gbkey=Gene;gene=yhjK;locus_tag=YPO3996
NC_003143.1	RefSeq	CDS	4504006	4506192	.	-	0	ID=cds3686;Name=YP_002348866.1;Parent=gene3891;Note=HmsP in Yersinia pestis plays a role in invasion of epithelial cells%3B the EAL-domain portion of HmsP from Y. pestis shows phosphodiesterase activity which is required for the inhibition of biofilm formation%3B inner membrane protein;Dbxref=InterPro:IPR000160,InterPro:IPR001633,InterPro:IPR003660,UniProtKB%2FTrEMBL:Q74QU7,Genbank:YP_002348866.1,GeneID:1176834;gbkey=CDS;gene=yhjK;product=biofilm formation regulator HmsP;protein_id=YP_002348866.1;transl_table=11
NC_003143.1	RefSeq	gene	4506338	4507449	.	-	.	ID=gene3892;Name=YPO3998;Dbxref=GeneID:1176835;gbkey=Gene;locus_tag=YPO3998;pseudo=true
NC_003143.1	RefSeq	gene	4507553	4508629	.	-	.	ID=gene3893;Name=dppF;Dbxref=GeneID:1176836;gbkey=Gene;gene=dppF;locus_tag=YPO3999
NC_003143.1	RefSeq	CDS	4507553	4508629	.	-	0	ID=cds3687;Name=YP_002348867.1;Parent=gene3893;Note=Part of the ABC transporter complex DppABCDF involved in the transport of dipeptides;Dbxref=InterPro:IPR003439,InterPro:IPR003593,InterPro:IPR010066,InterPro:IPR013563,UniProtKB%2FTrEMBL:Q0WA21,Genbank:YP_002348867.1,GeneID:1176836;gbkey=CDS;gene=dppF;product=dipeptide transporter ATP-binding protein;protein_id=YP_002348867.1;transl_table=11
NC_003143.1	RefSeq	region	4508039	4508083	.	-	.	ID=id2904;Note=PS00211 ABC transporters family signature.;Dbxref=GeneID:1176836;gbkey=misc_feature;gene=dppF
NC_003143.1	RefSeq	region	4508381	4508404	.	-	.	ID=id2905;Note=PS00017 ATP%2FGTP-binding site motif A %28P-loop%29.;Dbxref=GeneID:1176836;gbkey=misc_feature;gene=dppF
NC_003143.1	RefSeq	gene	4508626	4509606	.	-	.	ID=gene3894;Name=dppD;Dbxref=GeneID:1176837;gbkey=Gene;gene=dppD;locus_tag=YPO4000
NC_003143.1	RefSeq	CDS	4508626	4509606	.	-	0	ID=cds3688;Name=YP_002348868.1;Parent=gene3894;Note=DppD and DppF are the ATP-binding components of the ABC dipeptide transport system DppABCDF;Dbxref=InterPro:IPR003439,InterPro:IPR003593,InterPro:IPR010066,InterPro:IPR013563,UniProtKB%2FTrEMBL:Q74QU5,Genbank:YP_002348868.1,GeneID:1176837;gbkey=CDS;gene=dppD;product=dipeptide transporter ATP-binding protein;protein_id=YP_002348868.1;transl_table=11
NC_003143.1	RefSeq	region	4509103	4509147	.	-	.	ID=id2906;Note=PS00211 ABC transporters family signature.;Dbxref=GeneID:1176837;gbkey=misc_feature;gene=dppD
NC_003143.1	RefSeq	region	4509466	4509489	.	-	.	ID=id2907;Note=PS00017 ATP%2FGTP-binding site motif A %28P-loop%29.;Dbxref=GeneID:1176837;gbkey=misc_feature;gene=dppD
NC_003143.1	RefSeq	gene	4509620	4510522	.	-	.	ID=gene3895;Name=dppC;Dbxref=GeneID:1176838;gbkey=Gene;gene=dppC;locus_tag=YPO4001
NC_003143.1	RefSeq	CDS	4509620	4510522	.	-	0	ID=cds3689;Name=YP_002348869.1;Parent=gene3895;Dbxref=InterPro:IPR000515,UniProtKB%2FTrEMBL:Q7CG18,Genbank:YP_002348869.1,GeneID:1176838;gbkey=CDS;gene=dppC;product=dipeptide transporter;protein_id=YP_002348869.1;transl_table=11
NC_003143.1	RefSeq	gene	4510604	4511551	.	-	.	ID=gene3896;Name=dppB;Dbxref=GeneID:1176839;gbkey=Gene;gene=dppB;locus_tag=YPO4002
NC_003143.1	RefSeq	CDS	4510604	4511551	.	-	0	ID=cds3690;Name=YP_002348870.1;Parent=gene3896;Note=transports peptides consisting of two or three amino acids;Dbxref=InterPro:IPR000515,UniProtKB%2FTrEMBL:Q7CG19,Genbank:YP_002348870.1,GeneID:1176839;gbkey=CDS;gene=dppB;product=dipeptide transporter permease DppB;protein_id=YP_002348870.1;transl_table=11
NC_003143.1	RefSeq	region	4510781	4510867	.	-	.	ID=id2908;Note=PS00402 Binding-protein-dependent transport systems inner membrane comp. sign.;Dbxref=GeneID:1176839;gbkey=misc_feature;gene=dppB
NC_003143.1	RefSeq	gene	4511834	4513441	.	-	.	ID=gene3897;Name=dppA;Dbxref=GeneID:1176840;gbkey=Gene;gene=dppA;locus_tag=YPO4003
NC_003143.1	RefSeq	CDS	4511834	4513441	.	-	0	ID=cds3691;Name=YP_002348871.1;Parent=gene3897;Dbxref=InterPro:IPR000914,UniProtKB%2FTrEMBL:Q7CG20,Genbank:YP_002348871.1,GeneID:1176840;gbkey=CDS;gene=dppA;product=periplasmic dipeptide transport protein;protein_id=YP_002348871.1;transl_table=11
NC_003143.1	RefSeq	region	4513139	4513207	.	-	.	ID=id2909;Note=PS01040 Bacterial extracellular solute-binding proteins%2C family 5 signature.;Dbxref=GeneID:1176840;gbkey=misc_feature;gene=dppA
NC_003143.1	RefSeq	gene	4513844	4514092	.	-	.	ID=gene3898;Name=YPO4004;Dbxref=GeneID:1176841;gbkey=Gene;locus_tag=YPO4004
NC_003143.1	RefSeq	CDS	4513844	4514092	.	-	0	ID=cds3692;Name=YP_002348872.1;Parent=gene3898;Note=doubtful CDS with no significant database hits;Dbxref=UniProtKB%2FTrEMBL:Q74QU1,Genbank:YP_002348872.1,GeneID:1176841;gbkey=CDS;product=hypothetical protein;protein_id=YP_002348872.1;transl_table=11
NC_003143.1	RefSeq	gene	4514110	4515873	.	-	.	ID=gene3899;Name=YPO4005;Dbxref=GeneID:1176842;gbkey=Gene;locus_tag=YPO4005
NC_003143.1	RefSeq	CDS	4514110	4515873	.	-	0	ID=cds3693;Name=YP_002348873.1;Parent=gene3899;Dbxref=InterPro:IPR005565,InterPro:IPR013686,UniProtKB%2FTrEMBL:Q74QU0,Genbank:YP_002348873.1,GeneID:1176842;gbkey=CDS;product=hemolysin activator protein;protein_id=YP_002348873.1;transl_table=11
NC_003143.1	RefSeq	gene	4515982	4517373	.	-	.	ID=gene3900;Name=YPO4006;Dbxref=GeneID:1176843;gbkey=Gene;locus_tag=YPO4006
NC_003143.1	RefSeq	CDS	4515982	4517373	.	-	0	ID=cds3694;Name=YP_002348874.1;Parent=gene3900;Dbxref=InterPro:IPR008619,InterPro:IPR008638,InterPro:IPR010069,InterPro:IPR011050,UniProtKB%2FTrEMBL:Q7CG21,Genbank:YP_002348874.1,GeneID:1176843;gbkey=CDS;product=hypothetical protein;protein_id=YP_002348874.1;transl_table=11
NC_003143.1	RefSeq	gene	4517686	4517762	.	-	.	ID=gene3901;Name=YPt_69;Dbxref=GeneID:1176844;gbkey=Gene;locus_tag=YPt_69
NC_003143.1	RefSeq	tRNA	4517686	4517762	.	-	.	ID=rna101;Parent=gene3901;Note=tRNA Pro anticodon TGG%2C Cove score 92.73;Dbxref=GeneID:1176844;gbkey=tRNA;product=tRNA-Pro
NC_003143.1	RefSeq	exon	4517686	4517762	.	-	.	ID=id2910;Parent=rna101;Note=tRNA Pro anticodon TGG%2C Cove score 92.73;Dbxref=GeneID:1176844;gbkey=tRNA;product=tRNA-Pro
NC_003143.1	RefSeq	gene	4517879	4519210	.	-	.	ID=gene3902;Name=uhpC;Dbxref=GeneID:1176845;gbkey=Gene;gene=uhpC;locus_tag=YPO4007
NC_003143.1	RefSeq	CDS	4517879	4519210	.	-	0	ID=cds3695;Name=YP_002348875.1;Parent=gene3902;Note=membrane protein regulates uhpT expression;Dbxref=InterPro:IPR000849,InterPro:IPR007114,InterPro:IPR011701,UniProtKB%2FTrEMBL:Q0WA13,Genbank:YP_002348875.1,GeneID:1176845;gbkey=CDS;gene=uhpC;product=regulatory protein UhpC;protein_id=YP_002348875.1;transl_table=11
NC_003143.1	RefSeq	region	4521993	4522793	.	-	.	ID=id2911;Note=Probable sensor kinase protein of a two-component system. Similar to Escherichia coli sensor protein UhpB SW:UHPB_ECOLI %28P09835%29 %28500 aa%29 fasta scores: E%28%29: 0%2C 45.2%25 id in 504 aa%2C and to Salmonella typhimurium sensor protein UhpB SW:UHPB_SALTY %28P27668%29 %28500 aa%29 fasta scores: E%28%29: 0%2C45.6%25 id in 502 aa. CDS is disrupted by the insertion of an IS100 element at codon 266;gbkey=misc_feature;part=1%2F2;pseudo=true
NC_003143.1	RefSeq	region	4519305	4520042	.	-	.	ID=id2911;Note=Probable sensor kinase protein of a two-component system. Similar to Escherichia coli sensor protein UhpB SW:UHPB_ECOLI %28P09835%29 %28500 aa%29 fasta scores: E%28%29: 0%2C 45.2%25 id in 504 aa%2C and to Salmonella typhimurium sensor protein UhpB SW:UHPB_SALTY %28P27668%29 %28500 aa%29 fasta scores: E%28%29: 0%2C45.6%25 id in 502 aa. CDS is disrupted by the insertion of an IS100 element at codon 266;gbkey=misc_feature;part=2%2F2;pseudo=true
NC_003143.1	RefSeq	repeat_region	4520044	4521997	.	-	.	ID=id2912;Note=insertion sequence:IS100;gbkey=repeat_region
NC_003143.1	RefSeq	repeat_region	4520044	4520071	.	+	.	ID=id2913;Note=IS100 inverted repeat;gbkey=repeat_region
NC_003143.1	RefSeq	gene	4520110	4520892	.	-	.	ID=gene3903;Name=YPO4009;Note=ypmt1.57c;Dbxref=GeneID:1176847;gbkey=Gene;locus_tag=YPO4009
NC_003143.1	RefSeq	CDS	4520110	4520892	.	-	0	ID=cds3696;Name=YP_002348876.1;Parent=gene3903;Dbxref=InterPro:IPR001270,InterPro:IPR002611,InterPro:IPR003593,UniProtKB%2FTrEMBL:Q7ARK4,Genbank:YP_002348876.1,GeneID:1176847;gbkey=CDS;product=transposase%2FIS protein;protein_id=YP_002348876.1;transl_table=11
NC_003143.1	RefSeq	region	4520542	4520565	.	-	.	ID=id2914;Note=PS00017 ATP%2FGTP-binding site motif A %28P-loop%29.;Dbxref=GeneID:1176847;gbkey=misc_feature
NC_003143.1	RefSeq	gene	4520889	4521911	.	-	.	ID=gene3904;Name=y1093;Dbxref=GeneID:1176848;gbkey=Gene;gene=y1093;gene_synonym=ypmt1;locus_tag=YPO4010
NC_003143.1	RefSeq	CDS	4520889	4521911	.	-	0	ID=cds3697;Name=YP_002348877.1;Parent=gene3904;Dbxref=InterPro:IPR001584,InterPro:IPR006120,InterPro:IPR009057,InterPro:IPR012287,InterPro:IPR012337,UniProtKB%2FTrEMBL:Q7ARN5,Genbank:YP_002348877.1,GeneID:1176848;gbkey=CDS;gene=y1093;product=transposase for insertion sequence IS100;protein_id=YP_002348877.1;transl_table=11
NC_003143.1	RefSeq	region	4521795	4521860	.	-	.	ID=id2915;Note=Predicted helix-turn-helix motif with score 2147 %28%2B6.50 SD%29 at aa 18-39%2C sequence MSSRAIARELGISRNTVKRYLQ;Dbxref=GeneID:1176848;gbkey=misc_feature;gene=y1093
NC_003143.1	RefSeq	repeat_region	4521970	4521997	.	-	.	ID=id2916;Note=IS100 inverted repeat;gbkey=repeat_region
NC_003143.1	RefSeq	gene	4522790	4523380	.	-	.	ID=gene3905;Name=uhpA;Dbxref=GeneID:1176849;gbkey=Gene;gene=uhpA;locus_tag=YPO4012
NC_003143.1	RefSeq	CDS	4522790	4523380	.	-	0	ID=cds3698;Name=YP_002348878.1;Parent=gene3905;Dbxref=InterPro:IPR000792,InterPro:IPR001789,InterPro:IPR011006,InterPro:IPR011991,UniProtKB%2FTrEMBL:Q0WA10,Genbank:YP_002348878.1,GeneID:1176849;gbkey=CDS;gene=uhpA;product=two-component system response regulator;protein_id=YP_002348878.1;transl_table=11
NC_003143.1	RefSeq	region	4522841	4522924	.	-	.	ID=id2917;Note=PS00622 Bacterial regulatory proteins%2C luxR family signature.;Dbxref=GeneID:1176849;gbkey=misc_feature;gene=uhpA
NC_003143.1	RefSeq	region	4522856	4522921	.	-	.	ID=id2918;Note=Predicted helix-turn-helix motif with score 1362 %28%2B3.83 SD%29 at aa 178-199%2C sequence MEVREIAESLGLSPKTVHVHRA;Dbxref=GeneID:1176849;gbkey=misc_feature;gene=uhpA
NC_003143.1	RefSeq	gene	4523496	4525187	.	-	.	ID=gene3906;Name=yhjW;Dbxref=GeneID:1176850;gbkey=Gene;gene=yhjW;locus_tag=YPO4013
NC_003143.1	RefSeq	CDS	4523496	4525187	.	-	0	ID=cds3699;Name=YP_002348879.1;Parent=gene3906;Note=catalyzes the addition of a phosphoethanolamine group to the outer Kdo residue of lipopolysaccharide;Dbxref=InterPro:IPR000917,InterPro:IPR012549,UniProtKB%2FTrEMBL:Q7CFS1,Genbank:YP_002348879.1,GeneID:1176850;gbkey=CDS;gene=yhjW;product=phosphoethanolamine transferase;protein_id=YP_002348879.1;transl_table=11
NC_003143.1	RefSeq	gene	4525716	4527179	.	-	.	ID=gene3907;Name=YPO4014;Dbxref=GeneID:1176851;gbkey=Gene;locus_tag=YPO4014
NC_003143.1	RefSeq	CDS	4525716	4527179	.	-	0	ID=cds3700;Name=YP_002348880.1;Parent=gene3907;Dbxref=UniProtKB%2FTrEMBL:Q7CFS0,Genbank:YP_002348880.1,GeneID:1176851;gbkey=CDS;product=hypothetical protein;protein_id=YP_002348880.1;transl_table=11
NC_003143.1	RefSeq	region	4527090	4527140	.	-	.	ID=id2919;Note=1 probable transmembrane helix predicted;Dbxref=GeneID:1176851;gbkey=misc_feature
NC_003143.1	RefSeq	gene	4527647	4529050	.	-	.	ID=gene3908;Name=YPO4015;Dbxref=GeneID:1176852;gbkey=Gene;locus_tag=YPO4015
NC_003143.1	RefSeq	CDS	4527647	4529050	.	-	0	ID=cds3701;Name=YP_002348881.1;Parent=gene3908;Dbxref=InterPro:IPR002293,InterPro:IPR004840,InterPro:IPR004841,UniProtKB%2FTrEMBL:Q0WA07,Genbank:YP_002348881.1,GeneID:1176852;gbkey=CDS;product=amino acid permease;protein_id=YP_002348881.1;transl_table=11
NC_003143.1	RefSeq	region	4528838	4528930	.	-	.	ID=id2920;Note=PS00218 Amino acid permeases signature.;Dbxref=GeneID:1176852;gbkey=misc_feature
NC_003143.1	RefSeq	gene	4529468	4531000	.	-	.	ID=gene3909;Name=hutH;Dbxref=GeneID:1176853;gbkey=Gene;gene=hutH;locus_tag=YPO4016
NC_003143.1	RefSeq	CDS	4529468	4531000	.	-	0	ID=cds3702;Name=YP_002348882.1;Parent=gene3909;Note=catalyzes the degradation of histidine to urocanate and ammmonia;Dbxref=InterPro:IPR001106,InterPro:IPR002345,InterPro:IPR005921,InterPro:IPR008948,UniProtKB%2FTrEMBL:Q0WA06,Genbank:YP_002348882.1,GeneID:1176853;gbkey=CDS;gene=hutH;product=histidine ammonia-lyase;protein_id=YP_002348882.1;transl_table=11
NC_003143.1	RefSeq	region	4530485	4530526	.	-	.	ID=id2921;Note=PS00213 Lipocalin signature.;Dbxref=GeneID:1176853;gbkey=misc_feature;gene=hutH
NC_003143.1	RefSeq	region	4530539	4530586	.	-	.	ID=id2922;Note=PS00488 Phenylalanine and histidine ammonia-lyases signature.;Dbxref=GeneID:1176853;gbkey=misc_feature;gene=hutH
NC_003143.1	RefSeq	gene	4530997	4532688	.	-	.	ID=gene3910;Name=hutU;Dbxref=GeneID:1176854;gbkey=Gene;gene=hutU;locus_tag=YPO4017
NC_003143.1	RefSeq	CDS	4530997	4532688	.	-	0	ID=cds3703;Name=YP_002348883.1;Parent=gene3910;Note=catalyzes the formation of 4-imidazolone-5-propanoate from urocanate during histidine metabolism;Dbxref=InterPro:IPR000193,InterPro:IPR010990,UniProtKB%2FTrEMBL:Q0WA05,Genbank:YP_002348883.1,GeneID:1176854;gbkey=CDS;gene=hutU;product=urocanate hydratase;protein_id=YP_002348883.1;transl_table=11
NC_003143.1	RefSeq	region	4531453	4531482	.	-	.	ID=id2923;Note=PS01233 Urocanase active site.;Dbxref=GeneID:1176854;gbkey=misc_feature;gene=hutU
NC_003143.1	RefSeq	region	4532113	4532145	.	-	.	ID=id2924;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site.;Dbxref=GeneID:1176854;gbkey=misc_feature;gene=hutU
NC_003143.1	RefSeq	gene	4533415	4534359	.	+	.	ID=gene3911;Name=cysM;Dbxref=GeneID:1176855;gbkey=Gene;gene=cysM;locus_tag=YPO4018
NC_003143.1	RefSeq	CDS	4533415	4534359	.	+	0	ID=cds3704;Name=YP_002348884.1;Parent=gene3911;Dbxref=InterPro:IPR001926,UniProtKB%2FTrEMBL:Q0WA04,Genbank:YP_002348884.1,GeneID:1176855;gbkey=CDS;gene=cysM;product=pyridoxal-phosphate dependent protein;protein_id=YP_002348884.1;transl_table=11
NC_003143.1	RefSeq	gene	4534356	4534922	.	+	.	ID=gene3912;Name=cysM;Dbxref=GeneID:1176856;gbkey=Gene;gene=cysM;locus_tag=YPO4019
NC_003143.1	RefSeq	CDS	4534356	4534922	.	+	0	ID=cds3705;Name=YP_002348885.1;Parent=gene3912;Note=catalyzes a salvage reaction resulting in the formation of AMP which is metabolically less costly than a de novo synthesis;Dbxref=InterPro:IPR000836,UniProtKB%2FTrEMBL:Q7CFR9,Genbank:YP_002348885.1,GeneID:1176856;gbkey=CDS;product=adenine phosphoribosyltransferase;protein_id=YP_002348885.1;transl_table=11
NC_003143.1	RefSeq	gene	4535005	4535934	.	+	.	ID=gene3913;Name=YPO4020;Dbxref=GeneID:1176857;gbkey=Gene;locus_tag=YPO4020
NC_003143.1	RefSeq	CDS	4535005	4535934	.	+	0	ID=cds3706;Name=YP_002348886.1;Parent=gene3913;Dbxref=UniProtKB%2FTrEMBL:Q7CFR8,Genbank:YP_002348886.1,GeneID:1176857;gbkey=CDS;product=hypothetical protein;protein_id=YP_002348886.1;transl_table=11
NC_003143.1	RefSeq	gene	4535936	4537180	.	+	.	ID=gene3914;Name=YPO4021;Dbxref=GeneID:1176858;gbkey=Gene;locus_tag=YPO4021
NC_003143.1	RefSeq	CDS	4535936	4537180	.	+	0	ID=cds3707;Name=YP_002348887.1;Parent=gene3914;Dbxref=InterPro:IPR000115,InterPro:IPR011761,InterPro:IPR013816,UniProtKB%2FTrEMBL:Q0WA01,Genbank:YP_002348887.1,GeneID:1176858;gbkey=CDS;product=hypothetical protein;protein_id=YP_002348887.1;transl_table=11
NC_003143.1	RefSeq	gene	4537703	4538656	.	+	.	ID=gene3915;Name=YPO4022;Dbxref=GeneID:1176859;gbkey=Gene;locus_tag=YPO4022
NC_003143.1	RefSeq	CDS	4537703	4538656	.	+	0	ID=cds3708;Name=YP_002348888.1;Parent=gene3915;Dbxref=InterPro:IPR002491,UniProtKB%2FTrEMBL:Q0WA00,Genbank:YP_002348888.1,GeneID:1176859;gbkey=CDS;product=iron transport protein;protein_id=YP_002348888.1;transl_table=11
NC_003143.1	RefSeq	region	4537733	4537765	.	+	.	ID=id2925;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site.;Dbxref=GeneID:1176859;gbkey=misc_feature
NC_003143.1	RefSeq	gene	4538666	4539625	.	+	.	ID=gene3916;Name=YPO4023;Dbxref=GeneID:1176860;gbkey=Gene;locus_tag=YPO4023
NC_003143.1	RefSeq	CDS	4538666	4539625	.	+	0	ID=cds3709;Name=YP_002348889.1;Parent=gene3916;Dbxref=InterPro:IPR000522,UniProtKB%2FTrEMBL:Q7CFR7,Genbank:YP_002348889.1,GeneID:1176860;gbkey=CDS;product=iron transport permease;protein_id=YP_002348889.1;transl_table=11
NC_003143.1	RefSeq	gene	4539615	4540622	.	+	.	ID=gene3917;Name=YPO4024;Dbxref=GeneID:1176861;gbkey=Gene;locus_tag=YPO4024
NC_003143.1	RefSeq	CDS	4539615	4540622	.	+	0	ID=cds3710;Name=YP_002348890.1;Parent=gene3917;Dbxref=InterPro:IPR000522,UniProtKB%2FTrEMBL:Q0W9Z8,Genbank:YP_002348890.1,GeneID:1176861;gbkey=CDS;product=iron transport permease;protein_id=YP_002348890.1;transl_table=11
NC_003143.1	RefSeq	gene	4540619	4541377	.	+	.	ID=gene3918;Name=YPO4025;Dbxref=GeneID:1176862;gbkey=Gene;locus_tag=YPO4025
NC_003143.1	RefSeq	CDS	4540619	4541377	.	+	0	ID=cds3711;Name=YP_002348891.1;Parent=gene3918;Dbxref=InterPro:IPR003439,InterPro:IPR003593,UniProtKB%2FTrEMBL:Q7CFR6,Genbank:YP_002348891.1,GeneID:1176862;gbkey=CDS;product=iron ABC transporter ATP-binding protein;protein_id=YP_002348891.1;transl_table=11
NC_003143.1	RefSeq	region	4540718	4540741	.	+	.	ID=id2926;Note=PS00017 ATP%2FGTP-binding site motif A %28P-loop%29.;Dbxref=GeneID:1176862;gbkey=misc_feature
NC_003143.1	RefSeq	gene	4543227	4543589	.	+	.	ID=gene3919;Name=YPO4028;Dbxref=GeneID:1176864;gbkey=Gene;locus_tag=YPO4028
NC_003143.1	RefSeq	CDS	4543227	4543589	.	+	0	ID=cds3712;Name=YP_002348893.1;Parent=gene3919;Dbxref=InterPro:IPR001387,InterPro:IPR010982,UniProtKB%2FTrEMBL:Q7CFR5,Genbank:YP_002348893.1,GeneID:1176864;gbkey=CDS;product=regulator;protein_id=YP_002348893.1;transl_table=11
NC_003143.1	RefSeq	region	4543443	4543508	.	+	.	ID=id2927;Note=Predicted helix-turn-helix motif with score 2582 %28%2B7.98 SD%29 at aa 73-94%2C sequence FSQYEIAELLGTTQSAVSQWEA;Dbxref=GeneID:1176864;gbkey=misc_feature
NC_003143.1	RefSeq	gene	4543628	4544560	.	+	.	ID=gene3920;Name=YPO4029;Dbxref=GeneID:1176865;gbkey=Gene;locus_tag=YPO4029;pseudo=true
NC_003143.1	RefSeq	gene	4544734	4544979	.	+	.	ID=gene3921;Name=YPO4031;Dbxref=GeneID:1176866;gbkey=Gene;locus_tag=YPO4031
NC_003143.1	RefSeq	CDS	4544734	4544979	.	+	0	ID=cds3713;Name=YP_002348894.1;Parent=gene3921;Dbxref=InterPro:IPR007684,UniProtKB%2FTrEMBL:Q74QR9,Genbank:YP_002348894.1,GeneID:1176866;gbkey=CDS;product=regulatory protein;protein_id=YP_002348894.1;transl_table=11
NC_003143.1	RefSeq	gene	4545247	4546554	.	-	.	ID=gene3922;Name=YPO4032;Dbxref=GeneID:1176867;gbkey=Gene;locus_tag=YPO4032
NC_003143.1	RefSeq	CDS	4545247	4546554	.	-	0	ID=cds3714;Name=YP_002348895.1;Parent=gene3922;Note=no significant database hits. CDS DNA has a low G%2BC content%2C 31.03%25;Dbxref=UniProtKB%2FTrEMBL:Q0W9Z3,Genbank:YP_002348895.1,GeneID:1176867;gbkey=CDS;product=hypothetical protein;protein_id=YP_002348895.1;transl_table=11
NC_003143.1	RefSeq	region	4545577	4545606	.	-	.	ID=id2928;Note=PS00339 Aminoacyl-transfer RNA synthetases class-II signature 2.;Dbxref=GeneID:1176867;gbkey=misc_feature
NC_003143.1	RefSeq	gene	4546613	4547806	.	-	.	ID=gene3923;Name=YPO4033;Dbxref=GeneID:1176868;gbkey=Gene;locus_tag=YPO4033
NC_003143.1	RefSeq	CDS	4546613	4547806	.	-	0	ID=cds3715;Name=YP_002348896.1;Parent=gene3923;Dbxref=InterPro:IPR002104,InterPro:IPR011010,InterPro:IPR013762,UniProtKB%2FTrEMBL:Q7CFR4,Genbank:YP_002348896.1,GeneID:1176868;gbkey=CDS;product=phage integrase;protein_id=YP_002348896.1;transl_table=11
NC_003143.1	RefSeq	gene	4547972	4548062	.	-	.	ID=gene3924;Name=YPt_70;Dbxref=GeneID:1176869;gbkey=Gene;locus_tag=YPt_70
NC_003143.1	RefSeq	tRNA	4547972	4548062	.	-	.	ID=rna102;Parent=gene3924;Note=tRNA SeC%28p%29 anticodon TCA%2C Cove score 71.03;Dbxref=GeneID:1176869;gbkey=tRNA;product=tRNA-Sec
NC_003143.1	RefSeq	exon	4547972	4548062	.	-	.	ID=id2929;Parent=rna102;Note=tRNA SeC%28p%29 anticodon TCA%2C Cove score 71.03;Dbxref=GeneID:1176869;gbkey=tRNA;product=tRNA-Sec
NC_003143.1	RefSeq	gene	4548192	4549385	.	-	.	ID=gene3925;Name=YPO4034;Dbxref=GeneID:1176870;gbkey=Gene;locus_tag=YPO4034
NC_003143.1	RefSeq	CDS	4548192	4549385	.	-	0	ID=cds3716;Name=YP_002348897.1;Parent=gene3925;Dbxref=InterPro:IPR000005,InterPro:IPR009057,InterPro:IPR012287,UniProtKB%2FTrEMBL:Q7CFR3,Genbank:YP_002348897.1,GeneID:1176870;gbkey=CDS;product=AraC family transcriptional regulator;protein_id=YP_002348897.1;transl_table=11
NC_003143.1	RefSeq	region	4548231	4548359	.	-	.	ID=id2930;Note=PS00041 Bacterial regulatory proteins%2C araC family signature.;Dbxref=GeneID:1176870;gbkey=misc_feature
NC_003143.1	RefSeq	region	4548402	4548467	.	-	.	ID=id2931;Note=Predicted helix-turn-helix motif with score 1130 %28%2B3.04 SD%29 at aa 307-328%2C sequence IKVEQVLDAVGMSRSNLEKRFK;Dbxref=GeneID:1176870;gbkey=misc_feature
NC_003143.1	RefSeq	gene	4549475	4550659	.	-	.	ID=gene3926;Name=YPO4035;Dbxref=GeneID:1176871;gbkey=Gene;locus_tag=YPO4035
NC_003143.1	RefSeq	CDS	4549475	4550659	.	-	0	ID=cds3717;Name=YP_002348898.1;Parent=gene3926;Dbxref=InterPro:IPR001851,UniProtKB%2FTrEMBL:Q74QR5,Genbank:YP_002348898.1,GeneID:1176871;gbkey=CDS;product=sugar transport system permease;protein_id=YP_002348898.1;transl_table=11
NC_003143.1	RefSeq	gene	4550646	4552178	.	-	.	ID=gene3927;Name=YPO4036;Dbxref=GeneID:1176872;gbkey=Gene;locus_tag=YPO4036
NC_003143.1	RefSeq	CDS	4550646	4552178	.	-	0	ID=cds3718;Name=YP_002348899.1;Parent=gene3927;Note=with XylFH is part of the high affinity xylose ABC transporter;Dbxref=InterPro:IPR003439,InterPro:IPR003593,InterPro:IPR013455,UniProtKB%2FTrEMBL:Q7CFR2,Genbank:YP_002348899.1,GeneID:1176872;gbkey=CDS;product=xylose transporter ATP-binding protein;protein_id=YP_002348899.1;transl_table=11
NC_003143.1	RefSeq	region	4550919	4550963	.	-	.	ID=id2932;Note=PS00211 ABC transporters family signature.;Dbxref=GeneID:1176872;gbkey=misc_feature
NC_003143.1	RefSeq	region	4552047	4552070	.	-	.	ID=id2933;Note=PS00017 ATP%2FGTP-binding site motif A %28P-loop%29.;Dbxref=GeneID:1176872;gbkey=misc_feature
NC_003143.1	RefSeq	gene	4552386	4553381	.	-	.	ID=gene3928;Name=xylF;Dbxref=GeneID:1176873;gbkey=Gene;gene=xylF;locus_tag=YPO4037
NC_003143.1	RefSeq	CDS	4552386	4553381	.	-	0	ID=cds3719;Name=YP_002348900.1;Parent=gene3928;Note=periplasmic substrate-binding component of the ATP-dependent xylose transport system%3B high affinity;Dbxref=InterPro:IPR001761,InterPro:IPR013456,UniProtKB%2FTrEMBL:Q7CFR1,Genbank:YP_002348900.1,GeneID:1176873;gbkey=CDS;gene=xylF;product=D-xylose transporter subunit XylF;protein_id=YP_002348900.1;transl_table=11
NC_003143.1	RefSeq	gene	4553844	4555163	.	+	.	ID=gene3929;Name=xylA;Dbxref=GeneID:1176874;gbkey=Gene;gene=xylA;locus_tag=YPO4038
NC_003143.1	RefSeq	CDS	4553844	4555163	.	+	0	ID=cds3720;Name=YP_002348901.1;Parent=gene3929;Note=catalyzes the interconversion of D-xylose to D-xylulose;Dbxref=InterPro:IPR001998,InterPro:IPR012307,InterPro:IPR013452,UniProtKB%2FTrEMBL:Q0W9Y7,Genbank:YP_002348901.1,GeneID:1176874;gbkey=CDS;gene=xylA;product=xylose isomerase;protein_id=YP_002348901.1;transl_table=11
NC_003143.1	RefSeq	region	4554141	4554170	.	+	.	ID=id2934;Note=PS00173 Xylose isomerase signature 2.;Dbxref=GeneID:1176874;gbkey=misc_feature;gene=xylA
NC_003143.1	RefSeq	region	4554534	4554557	.	+	.	ID=id2935;Note=PS00172 Xylose isomerase signature 1.;Dbxref=GeneID:1176874;gbkey=misc_feature;gene=xylA
NC_003143.1	RefSeq	gene	4555287	4556741	.	+	.	ID=gene3930;Name=xylB;Dbxref=GeneID:1176875;gbkey=Gene;gene=xylB;locus_tag=YPO4039
NC_003143.1	RefSeq	CDS	4555287	4556741	.	+	0	ID=cds3721;Name=YP_002348902.1;Parent=gene3930;Dbxref=InterPro:IPR000577,InterPro:IPR006000,UniProtKB%2FTrEMBL:Q74QR1,Genbank:YP_002348902.1,GeneID:1176875;gbkey=CDS;gene=xylB;product=xylulose kinase;protein_id=YP_002348902.1;transl_table=11
NC_003143.1	RefSeq	region	4555662	4555700	.	+	.	ID=id2936;Note=PS00933 FGGY family of carbohydrate kinases signature 1.;Dbxref=GeneID:1176875;gbkey=misc_feature;gene=xylB
NC_003143.1	RefSeq	region	4556145	4556177	.	+	.	ID=id2937;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site.;Dbxref=GeneID:1176875;gbkey=misc_feature;gene=xylB
NC_003143.1	RefSeq	gene	4556859	4557845	.	-	.	ID=gene3931;Name=YPO4040;Dbxref=GeneID:1176876;gbkey=Gene;locus_tag=YPO4040
NC_003143.1	RefSeq	CDS	4556859	4557845	.	-	0	ID=cds3722;Name=YP_002348903.1;Parent=gene3931;Dbxref=InterPro:IPR000259,InterPro:IPR008966,UniProtKB%2FTrEMBL:Q7CFQ9,Genbank:YP_002348903.1,GeneID:1176876;gbkey=CDS;product=hypothetical protein;protein_id=YP_002348903.1;transl_table=11
NC_003143.1	RefSeq	gene	4557884	4558651	.	-	.	ID=gene3932;Name=YPO4041;Dbxref=GeneID:1176877;gbkey=Gene;locus_tag=YPO4041
NC_003143.1	RefSeq	CDS	4557884	4558651	.	-	0	ID=cds3723;Name=YP_002348904.1;Parent=gene3932;Dbxref=InterPro:IPR001829,InterPro:IPR008962,UniProtKB%2FTrEMBL:Q306L9,Genbank:YP_002348904.1,GeneID:1176877;gbkey=CDS;product=fimbrial chaperone;protein_id=YP_002348904.1;transl_table=11
NC_003143.1	RefSeq	region	4558268	4558321	.	-	.	ID=id2938;Note=PS00635 Gram-negative pili assembly chaperone signature.;Dbxref=GeneID:1176877;gbkey=misc_feature
NC_003143.1	RefSeq	region	4558544	4558609	.	-	.	ID=id2939;Note=1 probable transmembrane helix predicted;Dbxref=GeneID:1176877;gbkey=misc_feature
NC_003143.1	RefSeq	gene	4558744	4561234	.	-	.	ID=gene3933;Name=YPO4042;Dbxref=GeneID:1176878;gbkey=Gene;locus_tag=YPO4042;pseudo=true
NC_003143.1	RefSeq	region	4560275	4560307	.	-	.	ID=id2940;Note=PS01151 Fimbrial biogenesis outer membrane usher protein signature.;Dbxref=GeneID:1176878;gbkey=misc_feature
NC_003143.1	RefSeq	region	4561133	4561198	.	-	.	ID=id2941;Note=1 probable transmembrane helix predicted;Dbxref=GeneID:1176878;gbkey=misc_feature
NC_003143.1	RefSeq	gene	4561310	4561867	.	-	.	ID=gene3934;Name=YPO4044;Dbxref=GeneID:1176879;gbkey=Gene;locus_tag=YPO4044
NC_003143.1	RefSeq	CDS	4561310	4561867	.	-	0	ID=cds3724;Name=YP_002348905.1;Parent=gene3934;Dbxref=InterPro:IPR000259,InterPro:IPR008966,UniProtKB%2FTrEMBL:Q0W9Y3,Genbank:YP_002348905.1,GeneID:1176879;gbkey=CDS;product=fimbrial protein;protein_id=YP_002348905.1;transl_table=11
NC_003143.1	RefSeq	region	4561796	4561846	.	-	.	ID=id2942;Note=1 probable transmembrane helix predicted;Dbxref=GeneID:1176879;gbkey=misc_feature
NC_003143.1	RefSeq	gene	4562749	4563741	.	-	.	ID=gene3935;Name=YPO4045;Dbxref=GeneID:1176880;gbkey=Gene;locus_tag=YPO4045
NC_003143.1	RefSeq	CDS	4562749	4563741	.	-	0	ID=cds3725;Name=YP_002348906.1;Parent=gene3935;Dbxref=InterPro:IPR002656,UniProtKB%2FTrEMBL:Q7CFQ8,Genbank:YP_002348906.1,GeneID:1176880;gbkey=CDS;product=hypothetical protein;protein_id=YP_002348906.1;transl_table=11
NC_003143.1	RefSeq	gene	4563975	4564619	.	+	.	ID=gene3936;Name=YPO4046;Dbxref=GeneID:1176881;gbkey=Gene;locus_tag=YPO4046
NC_003143.1	RefSeq	CDS	4563975	4564619	.	+	0	ID=cds3726;Name=YP_002348907.2;Parent=gene3936;Dbxref=InterPro:IPR002514,InterPro:IPR009057,UniProtKB%2FTrEMBL:Q74RD6,Genbank:YP_002348907.2,GeneID:1176881;gbkey=CDS;product=insertion element IS1661 DNA-binding protein;protein_id=YP_002348907.2;transl_table=11
NC_003143.1	RefSeq	region	4564039	4565501	.	-	.	ID=id2943;Note=IS1397-like insertion element: IS1661;gbkey=misc_feature
NC_003143.1	RefSeq	repeat_region	4564039	4564071	.	+	.	ID=id2944;Note=Inverted repeat for IS1661 insertion element;Dbxref=GeneID:1176881;gbkey=repeat_region
NC_003143.1	RefSeq	region	4564161	4564226	.	+	.	ID=id2945;Note=Predicted helix-turn-helix motif with score 1691 %28%2B4.95 SD%29 at aa 20-41%2C sequence ATLRETARQFSVGKSPLTRWIR;Dbxref=GeneID:1176881;gbkey=misc_feature
NC_003143.1	RefSeq	gene	4564673	4565458	.	+	.	ID=gene3937;Name=YPO4047;Dbxref=GeneID:1176882;gbkey=Gene;locus_tag=YPO4047
NC_003143.1	RefSeq	CDS	4564673	4565458	.	+	0	ID=cds3727;Name=YP_002348908.1;Parent=gene3937;Dbxref=InterPro:IPR001584,InterPro:IPR012337,UniProtKB%2FTrEMBL:Q7CKI6,Genbank:YP_002348908.1,GeneID:1176882;gbkey=CDS;product=transposase for insertion sequence IS1661;protein_id=YP_002348908.1;transl_table=11
NC_003143.1	RefSeq	repeat_region	4565467	4565501	.	-	.	ID=id2946;Note=Inverted repeat for IS1661 insertion element;gbkey=repeat_region
NC_003143.1	RefSeq	gene	4565931	4567160	.	+	.	ID=gene3938;Name=cmr;Dbxref=GeneID:1176883;gbkey=Gene;gene=cmr;gene_synonym=mdfA;locus_tag=YPO4048
NC_003143.1	RefSeq	CDS	4565931	4567160	.	+	0	ID=cds3728;Name=YP_002348909.1;Parent=gene3938;Dbxref=InterPro:IPR007114,InterPro:IPR011701,UniProtKB%2FTrEMBL:Q7CFQ6,Genbank:YP_002348909.1,GeneID:1176883;gbkey=CDS;gene=cmr;product=multidrug translocase;protein_id=YP_002348909.1;transl_table=11
NC_003143.1	RefSeq	gene	4567870	4568451	.	+	.	ID=gene3939;Name=YPO4049;Dbxref=GeneID:1176884;gbkey=Gene;locus_tag=YPO4049
NC_003143.1	RefSeq	CDS	4567870	4568451	.	+	0	ID=cds3729;Name=YP_002348910.1;Parent=gene3939;Dbxref=UniProtKB%2FTrEMBL:Q0W9X8,Genbank:YP_002348910.1,GeneID:1176884;gbkey=CDS;product=hypothetical protein;protein_id=YP_002348910.1;transl_table=11
NC_003143.1	RefSeq	gene	4568465	4568797	.	-	.	ID=gene3940;Name=YPO4050;Dbxref=GeneID:1176885;gbkey=Gene;locus_tag=YPO4050
NC_003143.1	RefSeq	CDS	4568465	4568797	.	-	0	ID=cds3730;Name=YP_002348911.1;Parent=gene3940;Dbxref=UniProtKB%2FTrEMBL:Q7CFQ5,Genbank:YP_002348911.1,GeneID:1176885;gbkey=CDS;product=hypothetical protein;protein_id=YP_002348911.1;transl_table=11
NC_003143.1	RefSeq	gene	4569557	4571510	.	-	.	ID=gene3941;Name=fdhA;Dbxref=GeneID:1176887;gbkey=Gene;gene=fdhA;gene_synonym=selB;locus_tag=YPO4052;pseudo=true
NC_003143.1	RefSeq	region	4571388	4571435	.	-	.	ID=id2947;Note=PS00301 GTP-binding elongation factors signature.;Dbxref=GeneID:1176887;gbkey=misc_feature;gene=fdhA
NC_003143.1	RefSeq	region	4571469	4571492	.	-	.	ID=id2948;Note=PS00017 ATP%2FGTP-binding site motif A %28P-loop%29.;Dbxref=GeneID:1176887;gbkey=misc_feature;gene=fdhA
NC_003143.1	RefSeq	gene	4571507	4572895	.	-	.	ID=gene3942;Name=selA;Dbxref=GeneID:1176888;gbkey=Gene;gene=selA;locus_tag=YPO4054
NC_003143.1	RefSeq	CDS	4571507	4572895	.	-	0	ID=cds3731;Name=YP_002348913.1;Parent=gene3942;Note=catalyzes the formation of selenocysteinyl-tRNA%28Sec%29 from seryl-tRNA%28Sec%29 and L-selenophosphate in selenoprotein biosynthesis;Dbxref=InterPro:IPR004534,UniProtKB%2FTrEMBL:Q0W9X5,Genbank:YP_002348913.1,GeneID:1176888;gbkey=CDS;gene=selA;product=selenocysteine synthase;protein_id=YP_002348913.1;transl_table=11
NC_003143.1	RefSeq	gene	4573079	4574008	.	-	.	ID=gene3943;Name=fdhE;Dbxref=GeneID:1176889;gbkey=Gene;gene=fdhE;locus_tag=YPO4055
NC_003143.1	RefSeq	CDS	4573079	4574008	.	-	0	ID=cds3732;Name=YP_002348914.1;Parent=gene3943;Note=required for the formation of active formate dehydrogenase;Dbxref=InterPro:IPR006452,InterPro:IPR012282,UniProtKB%2FTrEMBL:Q0W9X4,Genbank:YP_002348914.1,GeneID:1176889;gbkey=CDS;gene=fdhE;product=formate dehydrogenase accessory protein FdhE;protein_id=YP_002348914.1;transl_table=11
NC_003143.1	RefSeq	gene	4574008	4574682	.	-	.	ID=gene3944;Name=fdoI;Dbxref=GeneID:1176890;gbkey=Gene;gene=fdoI;locus_tag=YPO4056
NC_003143.1	RefSeq	CDS	4574008	4574682	.	-	0	ID=cds3733;Name=YP_002348915.1;Parent=gene3944;Note=cytochrome b556%28FDO%29 component%3B heme containing;Dbxref=InterPro:IPR006471,InterPro:IPR011577,UniProtKB%2FTrEMBL:Q7CFQ4,Genbank:YP_002348915.1,GeneID:1176890;gbkey=CDS;gene=fdoI;product=formate dehydrogenase-O subunit gamma;protein_id=YP_002348915.1;transl_table=11
NC_003143.1	RefSeq	gene	4574679	4575650	.	-	.	ID=gene3945;Name=fdoH;Dbxref=GeneID:1176891;gbkey=Gene;gene=fdoH;locus_tag=YPO4057
NC_003143.1	RefSeq	CDS	4574679	4575650	.	-	0	ID=cds3734;Name=YP_002348916.1;Parent=gene3945;Dbxref=InterPro:IPR001450,InterPro:IPR006470,UniProtKB%2FTrEMBL:Q7CFQ3,Genbank:YP_002348916.1,GeneID:1176891;gbkey=CDS;gene=fdoH;product=formate dehydrogenase-O iron-sulfur subunit;protein_id=YP_002348916.1;transl_table=11
NC_003143.1	RefSeq	region	4575213	4575248	.	-	.	ID=id2949;Note=PS00198 4Fe-4S ferredoxins%2C iron-sulfur binding region signature.;Dbxref=GeneID:1176891;gbkey=misc_feature;gene=fdoH
NC_003143.1	RefSeq	gene	4575666	4578710	.	-	.	ID=gene3946;Name=fdoG;Dbxref=GeneID:1176892;gbkey=Gene;gene=fdoG;locus_tag=YPO4058;pseudo=true
NC_003143.1	RefSeq	region	4575666	4578710	.	-	.	ID=id2950;Note=Similar to Escherichia coli formate dehydrogenase-O%2Cmajor subunit FdoG SW:FDOG_ECOLI %28P32176%29 %281016 aa%29 fasta scores: E%28%29: 0%2C 85.7%25 id in 1016 aa%2C and to Escherichia coli formate dehydrogenase%2C nitrate-inducible%2C major subunit FdnG SW:FDNG_ECOLI %28P24183%29 %281015 aa%29 fasta scores: E%28%29: 0%2C 78.4%25 id in 1014 aa. Contains a nonsense mutation %28opal%29 at codon 196. The sequence has been checked and is believed to be correct. The E. coli protein also contains an opal codon at the same position%2C but the active site selenocysteine is incorporated by the selenocysteine tRNA;Dbxref=GeneID:1176892;gbkey=misc_feature;gene=fdoG;pseudo=true
NC_003143.1	RefSeq	region	4575849	4575932	.	-	.	ID=id2951;Note=PS00932 Prokaryotic molybdopterin oxidoreductases signature 3.;Dbxref=GeneID:1176892;gbkey=misc_feature;gene=fdoG
NC_003143.1	RefSeq	region	4578513	4578569	.	-	.	ID=id2952;Note=PS00551 Prokaryotic molybdopterin oxidoreductases signature 1.;Dbxref=GeneID:1176892;gbkey=misc_feature;gene=fdoG
NC_003143.1	RefSeq	gene	4578907	4579731	.	+	.	ID=gene3947;Name=fdhD;Dbxref=GeneID:1176893;gbkey=Gene;gene=fdhD;locus_tag=YPO4060
NC_003143.1	RefSeq	CDS	4578907	4579731	.	+	0	ID=cds3735;Name=YP_002348917.1;Parent=gene3947;Note=involved in the production or activity of formate dehydrogenase-H which is active when nitrate is not present during anaerobic growth;Dbxref=InterPro:IPR003786,UniProtKB%2FTrEMBL:Q0W9X1,Genbank:YP_002348917.1,GeneID:1176893;gbkey=CDS;gene=fdhD;product=formate dehydrogenase accessory protein;protein_id=YP_002348917.1;transl_table=11
NC_003143.1	RefSeq	gene	4580167	4580790	.	+	.	ID=gene3948;Name=sodA;Dbxref=GeneID:1176894;gbkey=Gene;gene=sodA;locus_tag=YPO4061
NC_003143.1	RefSeq	CDS	4580167	4580790	.	+	0	ID=cds3736;Name=YP_002348918.1;Parent=gene3948;Note=SodA%3B manganese binding%3B only present under aerobic conditions%3B destroys free radicals;Dbxref=InterPro:IPR001189,UniProtKB%2FTrEMBL:Q7CFQ2,Genbank:YP_002348918.1,GeneID:1176894;gbkey=CDS;gene=sodA;product=superoxide dismutase;protein_id=YP_002348918.1;transl_table=11
NC_003143.1	RefSeq	region	4580671	4580694	.	+	.	ID=id2953;Note=PS00088 Manganese and iron superoxide dismutases signature.;Dbxref=GeneID:1176894;gbkey=misc_feature;gene=sodA
NC_003143.1	RefSeq	gene	4581134	4583083	.	+	.	ID=gene3949;Name=cheM;Dbxref=GeneID:1176895;gbkey=Gene;gene=cheM;gene_synonym=tar;locus_tag=YPO4062
NC_003143.1	RefSeq	CDS	4581134	4583083	.	+	0	ID=cds3737;Name=YP_002348919.1;Parent=gene3949;Dbxref=InterPro:IPR003660,InterPro:IPR004089,InterPro:IPR004090,InterPro:IPR010989,UniProtKB%2FTrEMBL:Q7CFQ1,Genbank:YP_002348919.1,GeneID:1176895;gbkey=CDS;gene=cheM;product=methyl-accepting chemotaxis protein II;protein_id=YP_002348919.1;transl_table=11
NC_003143.1	RefSeq	region	4581191	4581259	.	+	.	ID=id2954;Note=1 probable transmembrane helix predicted;Dbxref=GeneID:1176895;gbkey=misc_feature;gene=cheM
NC_003143.1	RefSeq	gene	4583273	4583605	.	+	.	ID=gene3950;Name=YPO4063;Dbxref=GeneID:1176896;gbkey=Gene;locus_tag=YPO4063
NC_003143.1	RefSeq	CDS	4583273	4583605	.	+	0	ID=cds3738;Name=YP_002348920.1;Parent=gene3950;Dbxref=UniProtKB%2FTrEMBL:Q7CFQ0,Genbank:YP_002348920.1,GeneID:1176896;gbkey=CDS;product=hypothetical protein;protein_id=YP_002348920.1;transl_table=11
NC_003143.1	RefSeq	region	4583330	4583383	.	+	.	ID=id2955;Note=1 probable transmembrane helix predicted;Dbxref=GeneID:1176896;gbkey=misc_feature
NC_003143.1	RefSeq	gene	4584161	4584613	.	+	.	ID=gene3951;Name=YPO4064;Dbxref=GeneID:1176897;gbkey=Gene;locus_tag=YPO4064
NC_003143.1	RefSeq	CDS	4584161	4584613	.	+	0	ID=cds3739;Name=YP_002348921.1;Parent=gene3951;Dbxref=UniProtKB%2FTrEMBL:Q0W9W7,Genbank:YP_002348921.1,GeneID:1176897;gbkey=CDS;product=hypothetical protein;protein_id=YP_002348921.1;transl_table=11
NC_003143.1	RefSeq	gene	4584782	4585138	.	-	.	ID=gene3952;Name=YPO4065;Dbxref=GeneID:1176898;gbkey=Gene;locus_tag=YPO4065
NC_003143.1	RefSeq	CDS	4584782	4585138	.	-	0	ID=cds3740;Name=YP_002348922.1;Parent=gene3952;Dbxref=UniProtKB%2FTrEMBL:Q7CFP9,Genbank:YP_002348922.1,GeneID:1176898;gbkey=CDS;product=hypothetical protein;protein_id=YP_002348922.1;transl_table=11
NC_003143.1	RefSeq	gene	4585387	4585941	.	-	.	ID=gene3953;Name=mtlR;Dbxref=GeneID:1176899;gbkey=Gene;gene=mtlR;locus_tag=YPO4066
NC_003143.1	RefSeq	CDS	4585387	4585941	.	-	0	ID=cds3741;Name=YP_002348923.1;Parent=gene3953;Note=Acts as a repressor of the mtlAD operon;Dbxref=InterPro:IPR007761,UniProtKB%2FTrEMBL:Q7CFP8,Genbank:YP_002348923.1,GeneID:1176899;gbkey=CDS;gene=mtlR;product=mannitol repressor protein;protein_id=YP_002348923.1;transl_table=11
NC_003143.1	RefSeq	gene	4586148	4587311	.	-	.	ID=gene3954;Name=mtlD;Dbxref=GeneID:1176900;gbkey=Gene;gene=mtlD;locus_tag=YPO4067
NC_003143.1	RefSeq	CDS	4586148	4587311	.	-	0	ID=cds3742;Name=YP_002348924.1;Parent=gene3954;Dbxref=InterPro:IPR000669,InterPro:IPR008927,InterPro:IPR013118,InterPro:IPR013131,UniProtKB%2FTrEMBL:Q0W9W4,Genbank:YP_002348924.1,GeneID:1176900;gbkey=CDS;gene=mtlD;product=mannitol-1-phosphate 5-dehydrogenase;protein_id=YP_002348924.1;transl_table=11
NC_003143.1	RefSeq	region	4586826	4586864	.	-	.	ID=id2956;Note=PS00974 Mannitol dehydrogenases signature.;Dbxref=GeneID:1176900;gbkey=misc_feature;gene=mtlD
NC_003143.1	RefSeq	gene	4587448	4589379	.	-	.	ID=gene3955;Name=mtlA;Dbxref=GeneID:1176901;gbkey=Gene;gene=mtlA;locus_tag=YPO4068
NC_003143.1	RefSeq	CDS	4587448	4589379	.	-	0	ID=cds3743;Name=YP_002348925.1;Parent=gene3955;Dbxref=InterPro:IPR002178,InterPro:IPR003352,InterPro:IPR003501,InterPro:IPR004718,InterPro:IPR013011,InterPro:IPR013014,UniProtKB%2FTrEMBL:Q7CFP7,Genbank:YP_002348925.1,GeneID:1176901;gbkey=CDS;gene=mtlA;product=PTS system mannitol-specific transporter subunit IIABC;protein_id=YP_002348925.1;transl_table=11
NC_003143.1	RefSeq	region	4587703	4587753	.	-	.	ID=id2957;Note=PS00372 PTS EIIA domains phosphorylation site signature 2.;Dbxref=GeneID:1176901;gbkey=misc_feature;gene=mtlA
NC_003143.1	RefSeq	region	4589794	4589859	.	-	.	ID=id2958;Note=1 probable transmembrane helix predicted;gbkey=misc_feature
NC_003143.1	RefSeq	gene	4590029	4590754	.	-	.	ID=gene3956;Name=yiaF;Dbxref=GeneID:1176902;gbkey=Gene;gene=yiaF;locus_tag=YPO4070
NC_003143.1	RefSeq	CDS	4590029	4590754	.	-	0	ID=cds3744;Name=YP_002348926.1;Parent=gene3956;Dbxref=UniProtKB%2FTrEMBL:Q7CFP6,Genbank:YP_002348926.1,GeneID:1176902;gbkey=CDS;gene=yiaF;product=hypothetical protein;protein_id=YP_002348926.1;transl_table=11
NC_003143.1	RefSeq	region	4590659	4590709	.	-	.	ID=id2959;Note=1 probable transmembrane helix predicted;Dbxref=GeneID:1176902;gbkey=misc_feature;gene=yiaF
NC_003143.1	RefSeq	gene	4591221	4593290	.	-	.	ID=gene3957;Name=glyS;Dbxref=GeneID:1176903;gbkey=Gene;gene=glyS;locus_tag=YPO4071
NC_003143.1	RefSeq	CDS	4591221	4593290	.	-	0	ID=cds3745;Name=YP_002348927.1;Parent=gene3957;Note=glycine--tRNA ligase beta chain%3B glyS%3B class II aminoacyl tRNA synthetase%3B tetramer of alpha%282%29beta%282%29%3B catalyzes a two-step reaction%3B first charging a glycine molecule by linking the carboxyl group to the alpha-phosphate of ATP%3B second by transfer of the aminoacyl-adenylate to its tRNA;Dbxref=InterPro:IPR002311,InterPro:IPR006194,InterPro:IPR008909,InterPro:IPR009007,InterPro:IPR009080,UniProtKB%2FTrEMBL:Q0W9W1,Genbank:YP_002348927.1,GeneID:1176903;gbkey=CDS;gene=glyS;product=glycyl-tRNA synthetase subunit beta;protein_id=YP_002348927.1;transl_table=11
NC_003143.1	RefSeq	gene	4593300	4594214	.	-	.	ID=gene3958;Name=glyQ;Dbxref=GeneID:1176904;gbkey=Gene;gene=glyQ;locus_tag=YPO4072
NC_003143.1	RefSeq	CDS	4593300	4594214	.	-	0	ID=cds3746;Name=YP_002348928.1;Parent=gene3958;Note=glycine--tRNA ligase alpha chain%3B GlyRS%3B class II aminoacyl tRNA synthetase%3B tetramer of alpha%282%29beta%282%29%3B catalyzes a two-step reaction%3B first charging a glycine molecule by linking its carboxyl group to the alpha-phosphate of ATP%3B second by transfer of the aminoacyl-adenylate to its tRNA;Dbxref=InterPro:IPR002310,InterPro:IPR006194,UniProtKB%2FTrEMBL:Q0W9W0,Genbank:YP_002348928.1,GeneID:1176904;gbkey=CDS;gene=glyQ;product=glycyl-tRNA synthetase subunit alpha;protein_id=YP_002348928.1;transl_table=11
NC_003143.1	RefSeq	region	4593696	4593725	.	-	.	ID=id2960;Note=PS00339 Aminoacyl-transfer RNA synthetases class-II signature 2.;Dbxref=GeneID:1176904;gbkey=misc_feature;gene=glyQ
NC_003143.1	RefSeq	gene	4594542	4595114	.	+	.	ID=gene3959;Name=tag;Dbxref=GeneID:1176905;gbkey=Gene;gene=tag;locus_tag=YPO4074
NC_003143.1	RefSeq	CDS	4594542	4595114	.	+	0	ID=cds3747;Name=YP_002348929.1;Parent=gene3959;Dbxref=InterPro:IPR004597,InterPro:IPR005019,InterPro:IPR011257,UniProtKB%2FTrEMBL:Q74PD3,Genbank:YP_002348929.1,GeneID:1176905;gbkey=CDS;gene=tag;product=DNA-3-methyladenine glycosylase;protein_id=YP_002348929.1;transl_table=11
NC_003143.1	RefSeq	gene	4595111	4595566	.	+	.	ID=gene3960;Name=tag;Dbxref=GeneID:1176906;gbkey=Gene;gene=tag;locus_tag=YPO4075
NC_003143.1	RefSeq	CDS	4595111	4595566	.	+	0	ID=cds3748;Name=YP_002348930.1;Parent=gene3960;Dbxref=InterPro:IPR000182,UniProtKB%2FTrEMBL:Q7CFP5,Genbank:YP_002348930.1,GeneID:1176906;gbkey=CDS;product=hypothetical protein;protein_id=YP_002348930.1;transl_table=11
NC_003143.1	RefSeq	gene	4595924	4596583	.	+	.	ID=gene3961;Name=yiaD;Dbxref=GeneID:1176907;gbkey=Gene;gene=yiaD;locus_tag=YPO4076
NC_003143.1	RefSeq	CDS	4595924	4596583	.	+	0	ID=cds3749;Name=YP_002348931.1;Parent=gene3961;Dbxref=InterPro:IPR006664,InterPro:IPR006665,InterPro:IPR008816,UniProtKB%2FTrEMBL:Q7CFP4,Genbank:YP_002348931.1,GeneID:1176907;gbkey=CDS;gene=yiaD;product=outer membrane lipoprotein;protein_id=YP_002348931.1;transl_table=11
NC_003143.1	RefSeq	region	4595954	4595986	.	+	.	ID=id2961;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site.;Dbxref=GeneID:1176907;gbkey=misc_feature;gene=yiaD
NC_003143.1	RefSeq	region	4596005	4596028	.	+	.	ID=id2962;Note=PS00017 ATP%2FGTP-binding site motif A %28P-loop%29.;Dbxref=GeneID:1176907;gbkey=misc_feature;gene=yiaD
NC_003143.1	RefSeq	gene	4596714	4597358	.	-	.	ID=gene3962;Name=YPO4077;Dbxref=GeneID:1176908;gbkey=Gene;locus_tag=YPO4077
NC_003143.1	RefSeq	CDS	4596714	4597358	.	-	0	ID=cds3750;Name=YP_002348932.1;Parent=gene3962;Dbxref=InterPro:IPR011991,UniProtKB%2FTrEMBL:Q7CFP3,Genbank:YP_002348932.1,GeneID:1176908;gbkey=CDS;product=hypothetical protein;protein_id=YP_002348932.1;transl_table=11
NC_003143.1	RefSeq	gene	4597877	4598857	.	+	.	ID=gene3963;Name=YPO4078;Dbxref=GeneID:1176909;gbkey=Gene;locus_tag=YPO4078
NC_003143.1	RefSeq	CDS	4597877	4598857	.	+	0	ID=cds3751;Name=YP_002348933.1;Parent=gene3963;Dbxref=InterPro:IPR006139,InterPro:IPR006140,UniProtKB%2FTrEMBL:Q0W9V5,Genbank:YP_002348933.1,GeneID:1176909;gbkey=CDS;product=D-isomer specific 2-hydroxyacid dehydrogenase;protein_id=YP_002348933.1;transl_table=11
NC_003143.1	RefSeq	region	4598318	4598404	.	+	.	ID=id2963;Note=PS00065 D-isomer specific 2-hydroxyacid dehydrogenases NAD-binding signature.;Dbxref=GeneID:1176909;gbkey=misc_feature
NC_003143.1	RefSeq	region	4598552	4598602	.	+	.	ID=id2964;Note=PS00671 D-isomer specific 2-hydroxyacid dehydrogenases signature 3.;Dbxref=GeneID:1176909;gbkey=misc_feature
NC_003143.1	RefSeq	gene	4599146	4601209	.	+	.	ID=gene3964;Name=malS;Dbxref=GeneID:1176910;gbkey=Gene;gene=malS;locus_tag=YPO4080
NC_003143.1	RefSeq	CDS	4599146	4601209	.	+	0	ID=cds3752;Name=YP_002348934.1;Parent=gene3964;Note=periplasmic enzyme that degrades maltodextrins that enter via the outer membrane porin LamB%3B hydrolyzes alpha-%281%2C4%29 glycosidic linkages%3B contains internal disulfide bonds;Dbxref=InterPro:IPR006047,InterPro:IPR006589,InterPro:IPR013781,UniProtKB%2FTrEMBL:Q7CFP2,Genbank:YP_002348934.1,GeneID:1176910;gbkey=CDS;gene=malS;product=periplasmic alpha-amylase;protein_id=YP_002348934.1;transl_table=11
NC_003143.1	RefSeq	gene	4601624	4602067	.	+	.	ID=gene3965;Name=YPO4081;Dbxref=GeneID:1176911;gbkey=Gene;locus_tag=YPO4081
NC_003143.1	RefSeq	CDS	4601624	4602067	.	+	0	ID=cds3753;Name=YP_002348935.1;Parent=gene3965;Note=Poor database matches;Dbxref=UniProtKB%2FTrEMBL:Q7CFP1,Genbank:YP_002348935.1,GeneID:1176911;gbkey=CDS;product=hypothetical protein;protein_id=YP_002348935.1;transl_table=11
NC_003143.1	RefSeq	gene	4602522	4603787	.	+	.	ID=gene3966;Name=avtA;Dbxref=GeneID:1176912;gbkey=Gene;gene=avtA;locus_tag=YPO4082
NC_003143.1	RefSeq	CDS	4602522	4603787	.	+	0	ID=cds3754;Name=YP_002348936.1;Parent=gene3966;Note=transaminase C%3B catalyzes transamination of alanine%2C valine%2C and 2-aminobutyrate with their respective 2-keto acids%3B also catalyzes terminal step in valine biosynthesis;Dbxref=InterPro:IPR004839,UniProtKB%2FTrEMBL:Q0W9V2,Genbank:YP_002348936.1,GeneID:1176912;gbkey=CDS;gene=avtA;product=valine--pyruvate transaminase;protein_id=YP_002348936.1;transl_table=11
NC_003143.1	RefSeq	gene	4603900	4605558	.	-	.	ID=gene3967;Name=yidE;Dbxref=GeneID:1176913;gbkey=Gene;gene=yidE;locus_tag=YPO4083
NC_003143.1	RefSeq	CDS	4603900	4605558	.	-	0	ID=cds3755;Name=YP_002348937.1;Parent=gene3967;Dbxref=InterPro:IPR006037,InterPro:IPR006512,UniProtKB%2FTrEMBL:Q0W9V1,Genbank:YP_002348937.1,GeneID:1176913;gbkey=CDS;gene=yidE;product=hypothetical protein;protein_id=YP_002348937.1;transl_table=11
NC_003143.1	RefSeq	gene	4605931	4606395	.	-	.	ID=gene3968;Name=ibpB;Dbxref=GeneID:1176914;gbkey=Gene;gene=ibpB;gene_synonym=htpE,ibpB;locus_tag=YPO4084
NC_003143.1	RefSeq	CDS	4605931	4606395	.	-	0	ID=cds3756;Name=YP_002348938.1;Parent=gene3968;Note=16 kDa heat shock protein B%3B associates with aggregated proteins%2C together with ibpA%2C to stabilize and protect them from irreversible denaturation and extensive proteolysis during heat shock and oxidative stress%3B ATP-independent;Dbxref=InterPro:IPR002068,InterPro:IPR008978,UniProtKB%2FTrEMBL:Q0W9V0,Genbank:YP_002348938.1,GeneID:1176914;gbkey=CDS;gene=ibpB;product=heat shock chaperone IbpB;protein_id=YP_002348938.1;transl_table=11
NC_003143.1	RefSeq	gene	4606676	4607089	.	-	.	ID=gene3969;Name=ibpA;Dbxref=GeneID:1176915;gbkey=Gene;gene=ibpA;gene_synonym=htpN,ibpA;locus_tag=YPO4085
NC_003143.1	RefSeq	CDS	4606676	4607089	.	-	0	ID=cds3757;Name=YP_002348939.1;Parent=gene3969;Note=with IbpB associates with aggregated proteins to stabilize and protect them from irreversible denaturation and extensive proteolysis during heat shock and oxidative stress;Dbxref=InterPro:IPR002068,InterPro:IPR008978,UniProtKB%2FTrEMBL:Q0W9U9,Genbank:YP_002348939.1,GeneID:1176915;gbkey=CDS;gene=ibpA;product=heat shock protein IbpA;protein_id=YP_002348939.1;transl_table=11
NC_003143.1	RefSeq	gene	4607457	4607795	.	+	.	ID=gene3970;Name=YPO4086;Dbxref=GeneID:1176916;gbkey=Gene;locus_tag=YPO4086
NC_003143.1	RefSeq	CDS	4607457	4607795	.	+	0	ID=cds3758;Name=YP_002348940.1;Parent=gene3970;Dbxref=InterPro:IPR010780,UniProtKB%2FTrEMBL:Q7CFN9,Genbank:YP_002348940.1,GeneID:1176916;gbkey=CDS;product=hypothetical protein;protein_id=YP_002348940.1;transl_table=11
NC_003143.1	RefSeq	region	4607484	4607516	.	+	.	ID=id2965;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site.;Dbxref=GeneID:1176916;gbkey=misc_feature
NC_003143.1	RefSeq	gene	4607835	4608450	.	-	.	ID=gene3971;Name=YPO4087;Dbxref=GeneID:1176917;gbkey=Gene;locus_tag=YPO4087;pseudo=true
NC_003143.1	RefSeq	gene	4608658	4609620	.	+	.	ID=gene3972;Name=YPO4089;Dbxref=GeneID:1176918;gbkey=Gene;locus_tag=YPO4089
NC_003143.1	RefSeq	CDS	4608658	4609620	.	+	0	ID=cds3759;Name=YP_002348941.1;Parent=gene3972;Dbxref=InterPro:IPR000634,InterPro:IPR001926,UniProtKB%2FTrEMBL:Q0W9U7,Genbank:YP_002348941.1,GeneID:1176918;gbkey=CDS;product=hypothetical protein;protein_id=YP_002348941.1;transl_table=11
NC_003143.1	RefSeq	region	4608784	4608825	.	+	.	ID=id2966;Note=PS00165 Serine%2Fthreonine dehydratases pyridoxal-phosphate attachment site.;Dbxref=GeneID:1176918;gbkey=misc_feature
NC_003143.1	RefSeq	gene	4609614	4610567	.	+	.	ID=gene3973;Name=YPO4090;Dbxref=GeneID:1176919;gbkey=Gene;locus_tag=YPO4090
NC_003143.1	RefSeq	CDS	4609614	4610567	.	+	0	ID=cds3760;Name=YP_002348942.1;Parent=gene3973;Note=catalyzes the formation of L-proline from L-ornithine;Dbxref=InterPro:IPR003462,UniProtKB%2FTrEMBL:Q7CFN8,Genbank:YP_002348942.1,GeneID:1176919;gbkey=CDS;product=ornithine cyclodeaminase;protein_id=YP_002348942.1;transl_table=11
NC_003143.1	RefSeq	gene	4610624	4611289	.	+	.	ID=gene3974;Name=YPO4091;Dbxref=GeneID:1176920;gbkey=Gene;locus_tag=YPO4091
NC_003143.1	RefSeq	CDS	4610624	4611289	.	+	0	ID=cds3761;Name=YP_002348943.2;Parent=gene3974;Dbxref=InterPro:IPR002514,InterPro:IPR009057,UniProtKB%2FTrEMBL:Q74RD6,Genbank:YP_002348943.2,GeneID:1176920;gbkey=CDS;product=insertion element IS1661 DNA-binding protein;protein_id=YP_002348943.2;transl_table=11
NC_003143.1	RefSeq	region	4610709	4612170	.	+	.	ID=id2967;Note=IS1397-like insertion element: IS1661;gbkey=misc_feature
NC_003143.1	RefSeq	repeat_region	4610709	4610741	.	+	.	ID=id2968;Note=Inverted repeat for IS1661 insertion element;Dbxref=GeneID:1176920;gbkey=repeat_region
NC_003143.1	RefSeq	region	4610831	4610896	.	+	.	ID=id2969;Note=Predicted helix-turn-helix motif with score 1691 %28%2B4.95 SD%29 at aa 20-41%2C sequence ATLRETARQFSVGKSPLTRWIR;Dbxref=GeneID:1176920;gbkey=misc_feature
NC_003143.1	RefSeq	gene	4611343	4612128	.	+	.	ID=gene3975;Name=YPO4092;Dbxref=GeneID:1176921;gbkey=Gene;locus_tag=YPO4092
NC_003143.1	RefSeq	CDS	4611343	4612128	.	+	0	ID=cds3762;Name=YP_002348944.1;Parent=gene3975;Dbxref=InterPro:IPR001584,InterPro:IPR012337,UniProtKB%2FTrEMBL:Q7CKI6,Genbank:YP_002348944.1,GeneID:1176921;gbkey=CDS;product=transposase for insertion sequence IS1661;protein_id=YP_002348944.1;transl_table=11
NC_003143.1	RefSeq	repeat_region	4612137	4612170	.	-	.	ID=id2970;Note=Inverted repeat for IS1661 insertion element;gbkey=repeat_region
NC_003143.1	RefSeq	gene	4612519	4613328	.	-	.	ID=gene3976;Name=YPO4093;Dbxref=GeneID:1176922;gbkey=Gene;locus_tag=YPO4093
NC_003143.1	RefSeq	CDS	4612519	4613328	.	-	0	ID=cds3763;Name=YP_002348945.1;Parent=gene3976;Note=YidA%3B catalyzes the dephosphorylation of erythrose 4-phosphate %28preferred substrate%29%2C mannose 1-phosphate and p-nitrophenyl phosphate%3B hydrolyzes the alpha-D-glucose-1-phosphate but not the beta form%3B member of the haloacid dehalogenase-like hydrolases superfamily and Cof family of proteins;Dbxref=InterPro:IPR000150,InterPro:IPR006379,InterPro:IPR013200,UniProtKB%2FTrEMBL:Q0W9U3,Genbank:YP_002348945.1,GeneID:1176922;gbkey=CDS;product=sugar phosphatase;protein_id=YP_002348945.1;transl_table=11
NC_003143.1	RefSeq	region	4613281	4613316	.	-	.	ID=id2971;Note=PS01228 Hypothetical cof family signature 1.;Dbxref=GeneID:1176922;gbkey=misc_feature
NC_003143.1	RefSeq	gene	4613544	4615958	.	-	.	ID=gene3977;Name=gyrB;Dbxref=GeneID:1176923;gbkey=Gene;gene=gyrB;gene_synonym=himB,hisU,nalC,parA,pcbA;locus_tag=YPO4094
NC_003143.1	RefSeq	CDS	4613544	4615958	.	-	0	ID=cds3764;Name=YP_002348946.1;Parent=gene3977;Note=negatively supercoils closed circular double-stranded DNA;Dbxref=InterPro:IPR001241,InterPro:IPR002288,InterPro:IPR003594,InterPro:IPR006171,InterPro:IPR011557,InterPro:IPR011558,InterPro:IPR013506,InterPro:IPR013759,InterPro:IPR013760,UniProtKB%2FTrEMBL:Q0W9U2,Genbank:YP_002348946.1,GeneID:1176923;gbkey=CDS;gene=gyrB;product=DNA gyrase subunit B;protein_id=YP_002348946.1;transl_table=11
NC_003143.1	RefSeq	region	4614669	4614695	.	-	.	ID=id2972;Note=PS00177 DNA topoisomerase II signature.;Dbxref=GeneID:1176923;gbkey=misc_feature;gene=gyrB
NC_003143.1	RefSeq	gene	4615978	4617063	.	-	.	ID=gene3978;Name=recF;Dbxref=GeneID:1176924;gbkey=Gene;gene=recF;gene_synonym=uvrF;locus_tag=YPO4095
NC_003143.1	RefSeq	CDS	4615978	4617063	.	-	0	ID=cds3765;Name=YP_002348947.1;Parent=gene3978;Note=Required for DNA replication%3B binds preferentially to single-stranded%2C linear DNA;Dbxref=InterPro:IPR001238,InterPro:IPR003395,UniProtKB%2FTrEMBL:Q0W9U1,Genbank:YP_002348947.1,GeneID:1176924;gbkey=CDS;gene=recF;product=recombination protein F;protein_id=YP_002348947.1;transl_table=11
NC_003143.1	RefSeq	region	4616116	4616169	.	-	.	ID=id2973;Note=PS00618 RecF protein signature 2.;Dbxref=GeneID:1176924;gbkey=misc_feature;gene=recF
NC_003143.1	RefSeq	region	4616653	4616730	.	-	.	ID=id2974;Note=PS00617 RecF protein signature 1.;Dbxref=GeneID:1176924;gbkey=misc_feature;gene=recF
NC_003143.1	RefSeq	region	4616953	4616976	.	-	.	ID=id2975;Note=PS00017 ATP%2FGTP-binding site motif A %28P-loop%29.;Dbxref=GeneID:1176924;gbkey=misc_feature;gene=recF
NC_003143.1	RefSeq	gene	4617236	4618336	.	-	.	ID=gene3979;Name=dnaN;Dbxref=GeneID:1176925;gbkey=Gene;gene=dnaN;locus_tag=YPO4096
NC_003143.1	RefSeq	CDS	4617236	4618336	.	-	0	ID=cds3766;Name=YP_002348948.1;Parent=gene3979;Note=binds the polymerase to DNA and acts as a sliding clamp;Dbxref=InterPro:IPR001001,UniProtKB%2FTrEMBL:Q7CFN6,Genbank:YP_002348948.1,GeneID:1176925;gbkey=CDS;gene=dnaN;product=DNA polymerase III subunit beta;protein_id=YP_002348948.1;transl_table=11
NC_003143.1	RefSeq	gene	4618341	4619729	.	-	.	ID=gene3980;Name=dnaA;Dbxref=GeneID:1176926;gbkey=Gene;gene=dnaA;locus_tag=YPO4097
NC_003143.1	RefSeq	CDS	4618341	4619729	.	-	0	ID=cds3767;Name=YP_002348949.1;Parent=gene3980;Note=binds to the dnaA-box as an ATP-bound complex at the origin of replication during the initiation of chromosomal replication%3B can also affect transcription of multiple genes including itself.;Dbxref=InterPro:IPR001957,InterPro:IPR003593,InterPro:IPR010921,InterPro:IPR013159,InterPro:IPR013317,UniProtKB%2FTrEMBL:Q0W9T9,Genbank:YP_002348949.1,GeneID:1176926;gbkey=CDS;gene=dnaA;product=chromosome replication initiator DnaA;protein_id=YP_002348949.1;transl_table=11
NC_003143.1	RefSeq	region	4618413	4618472	.	-	.	ID=id2976;Note=PS01008 DnaA protein signature.;Dbxref=GeneID:1176926;gbkey=misc_feature;gene=dnaA
NC_003143.1	RefSeq	region	4619208	4619231	.	-	.	ID=id2977;Note=PS00017 ATP%2FGTP-binding site motif A %28P-loop%29.;Dbxref=GeneID:1176926;gbkey=misc_feature;gene=dnaA
NC_003143.1	RefSeq	gene	4619853	4620062	.	+	.	ID=gene3981;Name=YPO4098;Dbxref=GeneID:1176927;gbkey=Gene;locus_tag=YPO4098
NC_003143.1	RefSeq	CDS	4619853	4620062	.	+	0	ID=cds3768;Name=YP_002348950.1;Parent=gene3981;Note=no significant database hits;Dbxref=UniProtKB%2FTrEMBL:Q74PB5,Genbank:YP_002348950.1,GeneID:1176927;gbkey=CDS;product=hypothetical protein;protein_id=YP_002348950.1;transl_table=11
NC_003143.1	RefSeq	gene	4620439	4620579	.	+	.	ID=gene3982;Name=rpmH;Dbxref=GeneID:1176928;gbkey=Gene;gene=rpmH;gene_synonym=ssaF;locus_tag=YPO4100
NC_003143.1	RefSeq	CDS	4620439	4620579	.	+	0	ID=cds3769;Name=YP_002348951.1;Parent=gene3982;Note=in Escherichia coli transcription of this gene is enhanced by polyamines;Dbxref=InterPro:IPR000271,UniProtKB%2FTrEMBL:Q0W9T7,Genbank:YP_002348951.1,GeneID:1176928;gbkey=CDS;gene=rpmH;product=50S ribosomal protein L34;protein_id=YP_002348951.1;transl_table=11
NC_003143.1	RefSeq	region	4620442	4620501	.	+	.	ID=id2978;Note=PS00784 Ribosomal protein L34 signature.;Dbxref=GeneID:1176928;gbkey=misc_feature;gene=rpmH
NC_003143.1	RefSeq	gene	4620598	4620957	.	+	.	ID=gene3983;Name=rnpA;Dbxref=GeneID:1176929;gbkey=Gene;gene=rnpA;locus_tag=YPO4101
NC_003143.1	RefSeq	CDS	4620598	4620957	.	+	0	ID=cds3770;Name=YP_002348952.1;Parent=gene3983;Note=protein component of RNaseP which catalyzes the removal of the 5%27-leader sequence from pre-tRNA to produce the mature 5%27terminus%3B this enzyme also cleaves other RNA substrates;Dbxref=InterPro:IPR000100,UniProtKB%2FTrEMBL:Q0W9T6,Genbank:YP_002348952.1,GeneID:1176929;gbkey=CDS;gene=rnpA;product=ribonuclease P;protein_id=YP_002348952.1;transl_table=11
NC_003143.1	RefSeq	region	4620763	4620807	.	+	.	ID=id2979;Note=PS00648 Bacterial ribonuclease P protein component signature.;Dbxref=GeneID:1176929;gbkey=misc_feature;gene=rnpA
NC_003143.1	RefSeq	gene	4621181	4622821	.	+	.	ID=gene3984;Name=yidC;Dbxref=GeneID:1176930;gbkey=Gene;gene=yidC;locus_tag=YPO4102
NC_003143.1	RefSeq	CDS	4621181	4622821	.	+	0	ID=cds3771;Name=YP_002348953.1;Parent=gene3984;Note=functions to insert inner membrane proteins into the IM in Escherichia coli%3B interacts with transmembrane segments%3B functions in both Sec-dependent and -independent membrane insertion%3B similar to Oxa1p in mitochondria;Dbxref=InterPro:IPR001708,InterPro:IPR002332,InterPro:IPR013308,UniProtKB%2FTrEMBL:Q0W9T5,Genbank:YP_002348953.1,GeneID:1176930;gbkey=CDS;gene=yidC;product=inner membrane protein translocase component YidC;protein_id=YP_002348953.1;transl_table=11
NC_003143.1	RefSeq	region	4621832	4621849	.	+	.	ID=id2980;Note=PS00496 P-II protein urydylation site.;Dbxref=GeneID:1176930;gbkey=misc_feature;gene=yidC
NC_003143.1	RefSeq	gene	4622964	4624328	.	+	.	ID=gene3985;Name=trmE;Dbxref=GeneID:1176931;gbkey=Gene;gene=trmE;locus_tag=YPO4103
NC_003143.1	RefSeq	CDS	4622964	4624328	.	+	0	ID=cds3772;Name=YP_002348954.1;Parent=gene3985;Note=in Escherichia coli this protein is involved in the biosynthesis of the hypermodified nucleoside 5-methylaminomethyl-2-thiouridine%2C which is found in the wobble position of some tRNAs and affects ribosomal frameshifting%3B shows potassium-dependent dimerization and GTP hydrolysis%3B also involved in regulation of glutamate-dependent acid resistance and activation of gadE;Dbxref=InterPro:IPR001806,InterPro:IPR002917,InterPro:IPR004520,InterPro:IPR005225,InterPro:IPR005289,UniProtKB%2FTrEMBL:Q0W9T4,Genbank:YP_002348954.1,GeneID:1176931;gbkey=CDS;gene=trmE;product=tRNA modification GTPase TrmE;protein_id=YP_002348954.1;transl_table=11
NC_003143.1	RefSeq	region	4623630	4623653	.	+	.	ID=id2981;Note=PS00017 ATP%2FGTP-binding site motif A %28P-loop%29.;Dbxref=GeneID:1176931;gbkey=misc_feature;gene=trmE
NC_003143.1	RefSeq	gene	4624514	4625713	.	+	.	ID=gene3986;Name=YPO4104;Dbxref=GeneID:1176932;gbkey=Gene;locus_tag=YPO4104
NC_003143.1	RefSeq	CDS	4624514	4625713	.	+	0	ID=cds3773;Name=YP_002348955.1;Parent=gene3986;Note=enzyme from Treponema denticola exhibits NADH-dependent trans-2-enoyl-CoA reductase activity;Dbxref=InterPro:IPR010758,UniProtKB%2FTrEMBL:Q0W9T3,Genbank:YP_002348955.1,GeneID:1176932;gbkey=CDS;product=trans-2-enoyl-CoA reductase;protein_id=YP_002348955.1;transl_table=11
NC_003143.1	RefSeq	gene	4626181	4627144	.	-	.	ID=gene3987;Name=YPO4105;Dbxref=GeneID:1176933;gbkey=Gene;locus_tag=YPO4105;pseudo=true
NC_003143.1	RefSeq	gene	4627689	4629017	.	-	.	ID=gene3988;Name=yieG;Dbxref=GeneID:1176935;gbkey=Gene;gene=yieG;locus_tag=YPO4107
NC_003143.1	RefSeq	CDS	4627689	4629017	.	-	0	ID=cds3774;Name=YP_002348958.1;Parent=gene3988;Dbxref=InterPro:IPR006043,UniProtKB%2FTrEMBL:Q0W9T0,Genbank:YP_002348958.1,GeneID:1176935;gbkey=CDS;gene=yieG;product=xanthine%2Furacil permeases family protein;protein_id=YP_002348958.1;transl_table=11
NC_003143.1	RefSeq	gene	4629510	4630178	.	+	.	ID=gene3989;Name=YPO4108;Dbxref=GeneID:1176936;gbkey=Gene;locus_tag=YPO4108
NC_003143.1	RefSeq	CDS	4629510	4630178	.	+	0	ID=cds3775;Name=YP_002348959.1;Parent=gene3989;Note=YieH%3B catalyzes the dephosphorylation of phosphoenolpyruvate%2C AMP and p-nitrophenyl phosphate%3B purine and pyrimidine nucleotides are secondary substrates%3B member of the haloacid dehalogenase-like hydrolases superfamily;Dbxref=InterPro:IPR005833,InterPro:IPR005834,InterPro:IPR006402,InterPro:IPR006439,UniProtKB%2FTrEMBL:Q7CFN3,Genbank:YP_002348959.1,GeneID:1176936;gbkey=CDS;product=6-phosphogluconate phosphatase;protein_id=YP_002348959.1;transl_table=11
NC_003143.1	RefSeq	gene	4630213	4630968	.	-	.	ID=gene3990;Name=YPO4109;Dbxref=GeneID:1176937;gbkey=Gene;locus_tag=YPO4109
NC_003143.1	RefSeq	CDS	4630213	4630968	.	-	0	ID=cds3776;Name=YP_002348960.1;Parent=gene3990;Dbxref=InterPro:IPR000515,InterPro:IPR010065,UniProtKB%2FTrEMBL:Q0W9S8,Genbank:YP_002348960.1,GeneID:1176937;gbkey=CDS;product=amino acid transport system permease;protein_id=YP_002348960.1;transl_table=11
NC_003143.1	RefSeq	region	4630528	4630614	.	-	.	ID=id2982;Note=PS00402 Binding-protein-dependent transport systems inner membrane comp. sign.;Dbxref=GeneID:1176937;gbkey=misc_feature
NC_003143.1	RefSeq	gene	4630970	4631707	.	-	.	ID=gene3991;Name=YPO4110;Dbxref=GeneID:1176938;gbkey=Gene;locus_tag=YPO4110
NC_003143.1	RefSeq	CDS	4630970	4631707	.	-	0	ID=cds3777;Name=YP_002348961.1;Parent=gene3991;Dbxref=InterPro:IPR000515,InterPro:IPR010065,UniProtKB%2FTrEMBL:Q7CFN2,Genbank:YP_002348961.1,GeneID:1176938;gbkey=CDS;product=ABC transporter permease;protein_id=YP_002348961.1;transl_table=11
NC_003143.1	RefSeq	gene	4631890	4632744	.	-	.	ID=gene3992;Name=YPO4111;Dbxref=GeneID:1176939;gbkey=Gene;locus_tag=YPO4111
NC_003143.1	RefSeq	CDS	4631890	4632744	.	-	0	ID=cds3778;Name=YP_002348962.1;Parent=gene3992;Dbxref=InterPro:IPR001638,UniProtKB%2FTrEMBL:Q7CFN1,Genbank:YP_002348962.1,GeneID:1176939;gbkey=CDS;product=substrate-binding protein;protein_id=YP_002348962.1;transl_table=11
NC_003143.1	RefSeq	region	4632514	4632555	.	-	.	ID=id2983;Note=PS01039 Bacterial extracellular solute-binding proteins%2C family 3 signature.;Dbxref=GeneID:1176939;gbkey=misc_feature
NC_003143.1	RefSeq	gene	4632964	4633635	.	-	.	ID=gene3993;Name=YPO4112;Dbxref=GeneID:1176940;gbkey=Gene;locus_tag=YPO4112
NC_003143.1	RefSeq	CDS	4632964	4633635	.	-	0	ID=cds3779;Name=YP_002348963.1;Parent=gene3993;Dbxref=InterPro:IPR007607,UniProtKB%2FTrEMBL:Q7CFN0,Genbank:YP_002348963.1,GeneID:1176940;gbkey=CDS;product=hypothetical protein;protein_id=YP_002348963.1;transl_table=11
NC_003143.1	RefSeq	gene	4633931	4634653	.	-	.	ID=gene3994;Name=phoU;Dbxref=GeneID:1176941;gbkey=Gene;gene=phoU;locus_tag=YPO4113
NC_003143.1	RefSeq	CDS	4633931	4634653	.	-	0	ID=cds3780;Name=YP_002348964.1;Parent=gene3994;Note=regulates several genes involved in high affinity phosphate uptake%3B under conditions of high phosphate concentrations downregulates the PHO regulon;Dbxref=InterPro:IPR008170,UniProtKB%2FTrEMBL:Q0W9S4,Genbank:YP_002348964.1,GeneID:1176941;gbkey=CDS;gene=phoU;product=transcriptional regulator PhoU;protein_id=YP_002348964.1;transl_table=11
NC_003143.1	RefSeq	gene	4634741	4635517	.	-	.	ID=gene3995;Name=pstB;Dbxref=GeneID:1176942;gbkey=Gene;gene=pstB;locus_tag=YPO4114
NC_003143.1	RefSeq	CDS	4634741	4635517	.	-	0	ID=cds3781;Name=YP_002348965.1;Parent=gene3995;Note=ATP-binding protein%3B PstABCS is an ATP dependent phosphate uptake system which is responsible for inorganic phosphate uptake during phosphate starvation;Dbxref=InterPro:IPR003439,InterPro:IPR003593,InterPro:IPR005670,UniProtKB%2FTrEMBL:Q0W9S3,Genbank:YP_002348965.1,GeneID:1176942;gbkey=CDS;gene=pstB;product=phosphate transporter ATP-binding protein;protein_id=YP_002348965.1;transl_table=11
NC_003143.1	RefSeq	region	4635011	4635055	.	-	.	ID=id2984;Note=PS00211 ABC transporters family signature.;Dbxref=GeneID:1176942;gbkey=misc_feature;gene=pstB
NC_003143.1	RefSeq	region	4635365	4635388	.	-	.	ID=id2985;Note=PS00017 ATP%2FGTP-binding site motif A %28P-loop%29.;Dbxref=GeneID:1176942;gbkey=misc_feature;gene=pstB
NC_003143.1	RefSeq	gene	4635598	4636485	.	-	.	ID=gene3996;Name=pstA;Dbxref=GeneID:1176943;gbkey=Gene;gene=pstA;locus_tag=YPO4115
NC_003143.1	RefSeq	CDS	4635598	4636485	.	-	0	ID=cds3782;Name=YP_002348966.1;Parent=gene3996;Note=Part of the ABC transporter complex PstABCS responsible for inorganic phosphate %28Pi%29 uptake under Pi starvation conditions;Dbxref=InterPro:IPR000515,InterPro:IPR005672,UniProtKB%2FTrEMBL:Q0W9S2,Genbank:YP_002348966.1,GeneID:1176943;gbkey=CDS;gene=pstA;product=phosphate transporter permease PtsA;protein_id=YP_002348966.1;transl_table=11
NC_003143.1	RefSeq	region	4635874	4635960	.	-	.	ID=id2986;Note=PS00402 Binding-protein-dependent transport systems inner membrane comp. sign.;Dbxref=GeneID:1176943;gbkey=misc_feature;gene=pstA
NC_003143.1	RefSeq	gene	4636487	4637458	.	-	.	ID=gene3997;Name=pstC;Dbxref=GeneID:1176944;gbkey=Gene;gene=pstC;locus_tag=YPO4116
NC_003143.1	RefSeq	CDS	4636487	4637458	.	-	0	ID=cds3783;Name=YP_002348967.1;Parent=gene3997;Note=part of the ATP-dependent phosphate uptake system PstABCS responsible for inorganic phosphate %28Pi%29 uptake under Pi starvation conditions;Dbxref=InterPro:IPR000515,InterPro:IPR011864,UniProtKB%2FTrEMBL:Q0W9S1,Genbank:YP_002348967.1,GeneID:1176944;gbkey=CDS;gene=pstC;product=phosphate transporter permease PstC;protein_id=YP_002348967.1;transl_table=11
NC_003143.1	RefSeq	region	4636781	4636867	.	-	.	ID=id2987;Note=PS00402 Binding-protein-dependent transport systems inner membrane comp. sign.;Dbxref=GeneID:1176944;gbkey=misc_feature;gene=pstC
NC_003143.1	RefSeq	gene	4637672	4638712	.	-	.	ID=gene3998;Name=pstS;Dbxref=GeneID:1176945;gbkey=Gene;gene=pstS;locus_tag=YPO4117
NC_003143.1	RefSeq	CDS	4637672	4638712	.	-	0	ID=cds3784;Name=YP_002348968.1;Parent=gene3998;Dbxref=InterPro:IPR005673,InterPro:IPR006059,UniProtKB%2FTrEMBL:Q7CFM9,Genbank:YP_002348968.1,GeneID:1176945;gbkey=CDS;gene=pstS;product=phosphate ABC transporter substrate-binding protein PstS;protein_id=YP_002348968.1;transl_table=11
NC_003143.1	RefSeq	region	4638626	4638691	.	-	.	ID=id2988;Note=1 probable transmembrane helix predicted;Dbxref=GeneID:1176945;gbkey=misc_feature;gene=pstS
NC_003143.1	RefSeq	gene	4639195	4641024	.	-	.	ID=gene3999;Name=glmS;Dbxref=GeneID:1176946;gbkey=Gene;gene=glmS;locus_tag=YPO4118
NC_003143.1	RefSeq	CDS	4639195	4641024	.	-	0	ID=cds3785;Name=YP_002348969.1;Parent=gene3999;Note=Catalyzes the first step in hexosamine metabolism%2C converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source;Dbxref=InterPro:IPR000583,InterPro:IPR001347,InterPro:IPR005855,UniProtKB%2FTrEMBL:Q0W9R9,Genbank:YP_002348969.1,GeneID:1176946;gbkey=CDS;gene=glmS;product=glucosamine--fructose-6-phosphate aminotransferase;protein_id=YP_002348969.1;transl_table=11
NC_003143.1	RefSeq	region	4641007	4641024	.	-	.	ID=id2989;Note=PS00443 Glutamine amidotransferases class-II active site.;Dbxref=GeneID:1176946;gbkey=misc_feature;gene=glmS
NC_003143.1	RefSeq	gene	4641225	4642595	.	-	.	ID=gene4000;Name=glmU;Dbxref=GeneID:1176947;gbkey=Gene;gene=glmU;locus_tag=YPO4119
NC_003143.1	RefSeq	CDS	4641225	4642595	.	-	0	ID=cds3786;Name=YP_002348970.1;Parent=gene4000;Note=forms a homotrimer%3B catalyzes the acetylation of glucosamine-1-phosphate and uridylation of N-acetylglucosamine-1-phosphate to produce UDP-GlcNAc%3B function in cell wall synthesis;Dbxref=InterPro:IPR001228,InterPro:IPR001451,InterPro:IPR005882,InterPro:IPR011004,UniProtKB%2FTrEMBL:Q0W9R8,Genbank:YP_002348970.1,GeneID:1176947;gbkey=CDS;gene=glmU;product=bifunctional N-acetylglucosamine-1-phosphate uridyltransferase%2Fglucosamine-1-phosphate acetyltransferase;protein_id=YP_002348970.1;transl_table=11
NC_003143.1	RefSeq	region	4641303	4641389	.	-	.	ID=id2990;Note=PS00101 Hexapeptide-repeat containing-transferases signature.;Dbxref=GeneID:1176947;gbkey=misc_feature;gene=glmU
NC_003143.1	RefSeq	gene	4643216	4643638	.	-	.	ID=gene4001;Name=atpC;Dbxref=GeneID:1176948;gbkey=Gene;gene=atpC;gene_synonym=papG,uncC;locus_tag=YPO4120
NC_003143.1	RefSeq	CDS	4643216	4643638	.	-	0	ID=cds3787;Name=YP_002348971.1;Parent=gene4001;Note=part of catalytic core of ATP synthase%3B alpha%283%29beta%283%29gamma%281%29delta%281%29epsilon%281%29%3B involved in producing ATP from ADP in the presence of the proton motive force across the membrane;Dbxref=InterPro:IPR001469,UniProtKB%2FTrEMBL:Q0W9R7,Genbank:YP_002348971.1,GeneID:1176948;gbkey=CDS;gene=atpC;product=ATP synthase F0F1 subunit epsilon;protein_id=YP_002348971.1;transl_table=11
NC_003143.1	RefSeq	gene	4643660	4645042	.	-	.	ID=gene4002;Name=atpD;Dbxref=GeneID:1176949;gbkey=Gene;gene=atpD;gene_synonym=papB,uncD;locus_tag=YPO4121
NC_003143.1	RefSeq	CDS	4643660	4645042	.	-	0	ID=cds3788;Name=YP_002348972.1;Parent=gene4002;Note=Produces ATP from ADP in the presence of a proton gradient across the membrane. The beta chain is a regulatory subunit;Dbxref=InterPro:IPR000194,InterPro:IPR000793,InterPro:IPR003593,InterPro:IPR004100,InterPro:IPR005722,UniProtKB%2FTrEMBL:Q7CFM8,Genbank:YP_002348972.1,GeneID:1176949;gbkey=CDS;gene=atpD;product=ATP synthase F0F1 subunit beta;protein_id=YP_002348972.1;transl_table=11
NC_003143.1	RefSeq	region	4644017	4644046	.	-	.	ID=id2991;Note=PS00152 ATP synthase alpha and beta subunits signature.;Dbxref=GeneID:1176949;gbkey=misc_feature;gene=atpD
NC_003143.1	RefSeq	region	4644572	4644595	.	-	.	ID=id2992;Note=PS00017 ATP%2FGTP-binding site motif A %28P-loop%29.;Dbxref=GeneID:1176949;gbkey=misc_feature;gene=atpD
NC_003143.1	RefSeq	gene	4645198	4646061	.	-	.	ID=gene4003;Name=atpG;Dbxref=GeneID:1176950;gbkey=Gene;gene=atpG;gene_synonym=papC,uncG;locus_tag=YPO4122
NC_003143.1	RefSeq	CDS	4645198	4646061	.	-	0	ID=cds3789;Name=YP_002348973.1;Parent=gene4003;Note=Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is a regulatory subunit;Dbxref=InterPro:IPR000131,UniProtKB%2FTrEMBL:Q0W9R5,Genbank:YP_002348973.1,GeneID:1176950;gbkey=CDS;gene=atpG;product=ATP synthase F0F1 subunit gamma;protein_id=YP_002348973.1;transl_table=11
NC_003143.1	RefSeq	region	4645204	4645245	.	-	.	ID=id2993;Note=PS00153 ATP synthase gamma subunit signature.;Dbxref=GeneID:1176950;gbkey=misc_feature;gene=atpG
NC_003143.1	RefSeq	region	4645837	4645971	.	-	.	ID=id2994;Note=PS00041 Bacterial regulatory proteins%2C araC family signature.;Dbxref=GeneID:1176950;gbkey=misc_feature;gene=atpG
NC_003143.1	RefSeq	gene	4646123	4647664	.	-	.	ID=gene4004;Name=atpA;Dbxref=GeneID:1176951;gbkey=Gene;gene=atpA;gene_synonym=papA,uncA;locus_tag=YPO4123
NC_003143.1	RefSeq	CDS	4646123	4647664	.	-	0	ID=cds3790;Name=YP_002348974.1;Parent=gene4004;Note=produces ATP from ADP in the presence of a proton gradient across the membrane%3B the alpha chain is a catalytic subunit;Dbxref=InterPro:IPR000194,InterPro:IPR000793,InterPro:IPR004100,InterPro:IPR005294,UniProtKB%2FTrEMBL:Q0W9R4,Genbank:YP_002348974.1,GeneID:1176951;gbkey=CDS;gene=atpA;product=ATP synthase F0F1 subunit alpha;protein_id=YP_002348974.1;transl_table=11
NC_003143.1	RefSeq	region	4646540	4646569	.	-	.	ID=id2995;Note=PS00152 ATP synthase alpha and beta subunits signature.;Dbxref=GeneID:1176951;gbkey=misc_feature;gene=atpA
NC_003143.1	RefSeq	region	4647137	4647160	.	-	.	ID=id2996;Note=PS00017 ATP%2FGTP-binding site motif A %28P-loop%29.;Dbxref=GeneID:1176951;gbkey=misc_feature;gene=atpA
NC_003143.1	RefSeq	gene	4647679	4648212	.	-	.	ID=gene4005;Name=atpH;Dbxref=GeneID:1176952;gbkey=Gene;gene=atpH;gene_synonym=papE,uncH;locus_tag=YPO4124
NC_003143.1	RefSeq	CDS	4647679	4648212	.	-	0	ID=cds3791;Name=YP_002348975.1;Parent=gene4005;Note=Produces ATP from ADP in the presence of a proton gradient across the membrane%3B the delta subunit is part of the catalytic core of the ATP synthase complex;Dbxref=InterPro:IPR000711,UniProtKB%2FTrEMBL:Q7CFM5,Genbank:YP_002348975.1,GeneID:1176952;gbkey=CDS;gene=atpH;product=ATP synthase F0F1 subunit delta;protein_id=YP_002348975.1;transl_table=11
NC_003143.1	RefSeq	region	4647745	4647804	.	-	.	ID=id2997;Note=PS00389 ATP synthase delta %28OSCP%29 subunit signature.;Dbxref=GeneID:1176952;gbkey=misc_feature;gene=atpH
NC_003143.1	RefSeq	gene	4648227	4648697	.	-	.	ID=gene4006;Name=atpF;Dbxref=GeneID:1176953;gbkey=Gene;gene=atpF;gene_synonym=papF,uncF;locus_tag=YPO4125
NC_003143.1	RefSeq	CDS	4648227	4648697	.	-	0	ID=cds3792;Name=YP_002348976.1;Parent=gene4006;Note=Produces ATP from ADP in the presence of a proton gradient across the membrane. Subunit B is part of the membrane proton channel.;Dbxref=InterPro:IPR002146,InterPro:IPR005864,UniProtKB%2FTrEMBL:Q7CFM4,Genbank:YP_002348976.1,GeneID:1176953;gbkey=CDS;gene=atpF;product=ATP synthase F0F1 subunit B;protein_id=YP_002348976.1;transl_table=11
NC_003143.1	RefSeq	region	4648617	4648682	.	-	.	ID=id2998;Note=1 probable transmembrane helix predicted;Dbxref=GeneID:1176953;gbkey=misc_feature;gene=atpF
NC_003143.1	RefSeq	gene	4648759	4648998	.	-	.	ID=gene4007;Name=atpE;Dbxref=GeneID:1176954;gbkey=Gene;gene=atpE;gene_synonym=papH,uncE;locus_tag=YPO4126
NC_003143.1	RefSeq	CDS	4648759	4648998	.	-	0	ID=cds3793;Name=YP_002348977.1;Parent=gene4007;Note=Produces ATP from ADP in the presence of a proton gradient across the membrane. Subunit C is part of the membrane proton channel F0;Dbxref=InterPro:IPR000454,InterPro:IPR002379,InterPro:IPR005953,UniProtKB%2FTrEMBL:Q0W9R1,Genbank:YP_002348977.1,GeneID:1176954;gbkey=CDS;gene=atpE;product=ATP synthase F0F1 subunit C;protein_id=YP_002348977.1;transl_table=11
NC_003143.1	RefSeq	region	4648816	4648881	.	-	.	ID=id2999;Note=PS00605 ATP synthase c subunit signature.;Dbxref=GeneID:1176954;gbkey=misc_feature;gene=atpE
NC_003143.1	RefSeq	gene	4649048	4649872	.	-	.	ID=gene4008;Name=atpB;Dbxref=GeneID:1176955;gbkey=Gene;gene=atpB;gene_synonym=papD,uncB;locus_tag=YPO4127
NC_003143.1	RefSeq	CDS	4649048	4649872	.	-	0	ID=cds3794;Name=YP_002348978.1;Parent=gene4008;Note=Produces ATP from ADP in the presence of a proton gradient across the membrane. Subunit A is part of the membrane proton channel F0;Dbxref=InterPro:IPR000568,UniProtKB%2FTrEMBL:Q7CFM3,Genbank:YP_002348978.1,GeneID:1176955;gbkey=CDS;gene=atpB;product=ATP synthase F0F1 subunit A;protein_id=YP_002348978.1;transl_table=11
NC_003143.1	RefSeq	region	4649219	4649248	.	-	.	ID=id3000;Note=PS00449 ATP synthase a subunit signature.;Dbxref=GeneID:1176955;gbkey=misc_feature;gene=atpB
NC_003143.1	RefSeq	gene	4649912	4650295	.	-	.	ID=gene4009;Name=atpI;Dbxref=GeneID:1176956;gbkey=Gene;gene=atpI;gene_synonym=uncI;locus_tag=YPO4128
NC_003143.1	RefSeq	CDS	4649912	4650295	.	-	0	ID=cds3795;Name=YP_002348979.1;Parent=gene4009;Note=Produces ATP from ADP in the presence of a proton gradient across the membrane. Subunit I associates with the membrane and may be involved with cation translocation;Dbxref=InterPro:IPR005598,UniProtKB%2FTrEMBL:Q0W9Q9,Genbank:YP_002348979.1,GeneID:1176956;gbkey=CDS;gene=atpI;product=F0F1 ATP synthase subunit I;protein_id=YP_002348979.1;transl_table=11
NC_003143.1	RefSeq	region	4650119	4650151	.	-	.	ID=id3001;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site.;Dbxref=GeneID:1176956;gbkey=misc_feature;gene=atpI
NC_003143.1	RefSeq	gene	4650962	4651582	.	-	.	ID=gene4010;Name=gidB;Dbxref=GeneID:1176957;gbkey=Gene;gene=gidB;locus_tag=YPO4129
NC_003143.1	RefSeq	CDS	4650962	4651582	.	-	0	ID=cds3796;Name=YP_002348980.1;Parent=gene4010;Note=glucose-inhibited division protein B%3B SAM-dependent methyltransferase%3B methylates the N7 position of guanosine in position 527 of 16S rRNA;Dbxref=InterPro:IPR003682,UniProtKB%2FTrEMBL:Q0W9Q8,Genbank:YP_002348980.1,GeneID:1176957;gbkey=CDS;gene=gidB;product=16S rRNA methyltransferase GidB;protein_id=YP_002348980.1;transl_table=11
NC_003143.1	RefSeq	gene	4651728	4653617	.	-	.	ID=gene4011;Name=gidA;Dbxref=GeneID:1176958;gbkey=Gene;gene=gidA;locus_tag=YPO4130
NC_003143.1	RefSeq	CDS	4651728	4653617	.	-	0	ID=cds3797;Name=YP_002348981.1;Parent=gene4011;Note=GidA%3B glucose-inhibited cell division protein A%3B involved in the 5-carboxymethylaminomethyl modification %28mnm%285%29s%282%29U%29 of the wobble uridine base in some tRNAs;Dbxref=InterPro:IPR002218,InterPro:IPR004416,UniProtKB%2FTrEMBL:Q0W9Q7,Genbank:YP_002348981.1,GeneID:1176958;gbkey=CDS;gene=gidA;product=tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA;protein_id=YP_002348981.1;transl_table=11
NC_003143.1	RefSeq	region	4651767	4651832	.	-	.	ID=id3002;Note=Predicted helix-turn-helix motif with score 1147 %28%2B3.09 SD%29 at aa 623-644%2C sequence SSIGQASRISGITPAAISILLV;Dbxref=GeneID:1176958;gbkey=misc_feature;gene=gidA
NC_003143.1	RefSeq	region	4652445	4652516	.	-	.	ID=id3003;Note=PS01281 Glucose inhibited division protein A family signature 2.;Dbxref=GeneID:1176958;gbkey=misc_feature;gene=gidA
NC_003143.1	RefSeq	region	4652757	4652801	.	-	.	ID=id3004;Note=PS01280 Glucose inhibited division protein A family signature 1.;Dbxref=GeneID:1176958;gbkey=misc_feature;gene=gidA
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