/users/252891/scratch/edge/database/yersinia/results/Ypestis_CO92_norepeats.fna /users/252891/scratch/edge/database/yersinia/results/Ypestis_Nepal516_norepeats.fna NUCMER [P1] [SUB] [SUB] [P2] [BUFF] [DIST] [FRM] [TAGS] 1466 T C 1466 1466 1466 1 1 Ypestis_CO92_1016182_1019612 Ypestis_Nepal516_3512078_3515508 5496 T G 5496 923 5496 1 1 Ypestis_CO92_1019783_1063904 Ypestis_Nepal516_3515679_3559808 6419 . C 6420 0 6419 1 1 Ypestis_CO92_1019783_1063904 Ypestis_Nepal516_3515679_3559808 6419 . T 6421 0 6419 1 1 Ypestis_CO92_1019783_1063904 Ypestis_Nepal516_3515679_3559808 6419 . A 6422 0 6419 1 1 Ypestis_CO92_1019783_1063904 Ypestis_Nepal516_3515679_3559808 6419 . A 6423 0 6419 1 1 Ypestis_CO92_1019783_1063904 Ypestis_Nepal516_3515679_3559808 6419 . T 6424 0 6419 1 1 Ypestis_CO92_1019783_1063904 Ypestis_Nepal516_3515679_3559808 6419 . T 6425 0 6419 1 1 Ypestis_CO92_1019783_1063904 Ypestis_Nepal516_3515679_3559808 6419 . G 6426 0 6419 1 1 Ypestis_CO92_1019783_1063904 Ypestis_Nepal516_3515679_3559808 6419 . A 6427 0 6419 1 1 Ypestis_CO92_1019783_1063904 Ypestis_Nepal516_3515679_3559808 6419 . G 6428 0 6419 1 1 Ypestis_CO92_1019783_1063904 Ypestis_Nepal516_3515679_3559808 12412 A G 12421 5993 12412 1 1 Ypestis_CO92_1019783_1063904 Ypestis_Nepal516_3515679_3559808 27521 C . 27529 7713 16602 1 1 Ypestis_CO92_1019783_1063904 Ypestis_Nepal516_3515679_3559808 35234 G T 35242 7713 8889 1 1 Ypestis_CO92_1019783_1063904 Ypestis_Nepal516_3515679_3559808 1103 A C 19901 391 391 1 -1 Ypestis_CO92_104085_105577 Ypestis_Nepal516_4287770_4308773 617 . T 688 0 617 1 1 Ypestis_CO92_1071581_1079971 Ypestis_Nepal516_3567485_3575954 617 . T 689 0 617 1 1 Ypestis_CO92_1071581_1079971 Ypestis_Nepal516_3567485_3575954 617 . C 690 0 617 1 1 Ypestis_CO92_1071581_1079971 Ypestis_Nepal516_3567485_3575954 617 . C 691 0 617 1 1 Ypestis_CO92_1071581_1079971 Ypestis_Nepal516_3567485_3575954 617 . T 692 0 617 1 1 Ypestis_CO92_1071581_1079971 Ypestis_Nepal516_3567485_3575954 617 . C 693 0 617 1 1 Ypestis_CO92_1071581_1079971 Ypestis_Nepal516_3567485_3575954 617 . A 694 0 617 1 1 Ypestis_CO92_1071581_1079971 Ypestis_Nepal516_3567485_3575954 617 . C 695 0 617 1 1 Ypestis_CO92_1071581_1079971 Ypestis_Nepal516_3567485_3575954 617 . T 696 0 617 1 1 Ypestis_CO92_1071581_1079971 Ypestis_Nepal516_3567485_3575954 13162 A . 6351 1 6351 1 -1 Ypestis_CO92_107536_127076 Ypestis_Nepal516_4287770_4308773 13163 C . 6351 1 6351 1 -1 Ypestis_CO92_107536_127076 Ypestis_Nepal516_4287770_4308773 13164 T . 6351 1 6351 1 -1 Ypestis_CO92_107536_127076 Ypestis_Nepal516_4287770_4308773 13165 G . 6351 1 6351 1 -1 Ypestis_CO92_107536_127076 Ypestis_Nepal516_4287770_4308773 13166 C . 6351 1 6351 1 -1 Ypestis_CO92_107536_127076 Ypestis_Nepal516_4287770_4308773 13167 A . 6351 1 6351 1 -1 Ypestis_CO92_107536_127076 Ypestis_Nepal516_4287770_4308773 13168 G . 6351 1 6351 1 -1 Ypestis_CO92_107536_127076 Ypestis_Nepal516_4287770_4308773 13169 T . 6351 1 6351 1 -1 Ypestis_CO92_107536_127076 Ypestis_Nepal516_4287770_4308773 13170 G . 6351 1 6351 1 -1 Ypestis_CO92_107536_127076 Ypestis_Nepal516_4287770_4308773 13171 A . 6351 1 6351 1 -1 Ypestis_CO92_107536_127076 Ypestis_Nepal516_4287770_4308773 13172 A . 6351 1 6351 1 -1 Ypestis_CO92_107536_127076 Ypestis_Nepal516_4287770_4308773 13173 A . 6351 1 6351 1 -1 Ypestis_CO92_107536_127076 Ypestis_Nepal516_4287770_4308773 13174 A . 6351 1 6351 1 -1 Ypestis_CO92_107536_127076 Ypestis_Nepal516_4287770_4308773 13175 G . 6351 1 6351 1 -1 Ypestis_CO92_107536_127076 Ypestis_Nepal516_4287770_4308773 13176 G . 6351 1 6351 1 -1 Ypestis_CO92_107536_127076 Ypestis_Nepal516_4287770_4308773 13177 T . 6351 1 6351 1 -1 Ypestis_CO92_107536_127076 Ypestis_Nepal516_4287770_4308773 13178 T . 6351 1 6351 1 -1 Ypestis_CO92_107536_127076 Ypestis_Nepal516_4287770_4308773 13179 A . 6351 1 6351 1 -1 Ypestis_CO92_107536_127076 Ypestis_Nepal516_4287770_4308773 13180 A . 6351 1 6351 1 -1 Ypestis_CO92_107536_127076 Ypestis_Nepal516_4287770_4308773 13181 C . 6351 1 6351 1 -1 Ypestis_CO92_107536_127076 Ypestis_Nepal516_4287770_4308773 13182 T . 6351 1 6351 1 -1 Ypestis_CO92_107536_127076 Ypestis_Nepal516_4287770_4308773 13183 G . 6351 1 6351 1 -1 Ypestis_CO92_107536_127076 Ypestis_Nepal516_4287770_4308773 13184 C . 6351 1 6351 1 -1 Ypestis_CO92_107536_127076 Ypestis_Nepal516_4287770_4308773 13185 A . 6351 1 6351 1 -1 Ypestis_CO92_107536_127076 Ypestis_Nepal516_4287770_4308773 13186 G . 6351 1 6351 1 -1 Ypestis_CO92_107536_127076 Ypestis_Nepal516_4287770_4308773 13187 T . 6351 1 6351 1 -1 Ypestis_CO92_107536_127076 Ypestis_Nepal516_4287770_4308773 13188 G . 6351 1 6351 1 -1 Ypestis_CO92_107536_127076 Ypestis_Nepal516_4287770_4308773 13189 A . 6351 1 6351 1 -1 Ypestis_CO92_107536_127076 Ypestis_Nepal516_4287770_4308773 13190 A . 6351 1 6351 1 -1 Ypestis_CO92_107536_127076 Ypestis_Nepal516_4287770_4308773 13191 A . 6351 1 6351 1 -1 Ypestis_CO92_107536_127076 Ypestis_Nepal516_4287770_4308773 13192 A . 6351 1 6350 1 -1 Ypestis_CO92_107536_127076 Ypestis_Nepal516_4287770_4308773 13193 G . 6351 1 6349 1 -1 Ypestis_CO92_107536_127076 Ypestis_Nepal516_4287770_4308773 13194 G . 6351 1 6348 1 -1 Ypestis_CO92_107536_127076 Ypestis_Nepal516_4287770_4308773 13195 T . 6351 1 6347 1 -1 Ypestis_CO92_107536_127076 Ypestis_Nepal516_4287770_4308773 13196 T . 6351 1 6346 1 -1 Ypestis_CO92_107536_127076 Ypestis_Nepal516_4287770_4308773 13197 A . 6351 1 6345 1 -1 Ypestis_CO92_107536_127076 Ypestis_Nepal516_4287770_4308773 19458 . T 83 0 83 1 -1 Ypestis_CO92_107536_127076 Ypestis_Nepal516_4287770_4308773 19458 . T 84 0 84 1 -1 Ypestis_CO92_107536_127076 Ypestis_Nepal516_4287770_4308773 19458 . G 85 0 84 1 -1 Ypestis_CO92_107536_127076 Ypestis_Nepal516_4287770_4308773 19458 . G 86 0 84 1 -1 Ypestis_CO92_107536_127076 Ypestis_Nepal516_4287770_4308773 19458 . T 87 0 84 1 -1 Ypestis_CO92_107536_127076 Ypestis_Nepal516_4287770_4308773 19458 . G 88 0 84 1 -1 Ypestis_CO92_107536_127076 Ypestis_Nepal516_4287770_4308773 19458 . G 89 0 84 1 -1 Ypestis_CO92_107536_127076 Ypestis_Nepal516_4287770_4308773 19458 . T 90 0 84 1 -1 Ypestis_CO92_107536_127076 Ypestis_Nepal516_4287770_4308773 3786 T . 3785 1 3785 1 1 Ypestis_CO92_1086850_1107456 Ypestis_Nepal516_3582834_3603430 3787 T . 3785 1 3785 1 1 Ypestis_CO92_1086850_1107456 Ypestis_Nepal516_3582834_3603430 3788 A . 3785 1 3785 1 1 Ypestis_CO92_1086850_1107456 Ypestis_Nepal516_3582834_3603430 3789 T . 3785 1 3785 1 1 Ypestis_CO92_1086850_1107456 Ypestis_Nepal516_3582834_3603430 3790 T . 3785 1 3785 1 1 Ypestis_CO92_1086850_1107456 Ypestis_Nepal516_3582834_3603430 4461 T . 4455 1 4455 1 1 Ypestis_CO92_1086850_1107456 Ypestis_Nepal516_3582834_3603430 4462 A . 4455 1 4455 1 1 Ypestis_CO92_1086850_1107456 Ypestis_Nepal516_3582834_3603430 4463 C . 4455 1 4455 1 1 Ypestis_CO92_1086850_1107456 Ypestis_Nepal516_3582834_3603430 4464 A . 4455 1 4455 1 1 Ypestis_CO92_1086850_1107456 Ypestis_Nepal516_3582834_3603430 4465 A . 4455 1 4455 1 1 Ypestis_CO92_1086850_1107456 Ypestis_Nepal516_3582834_3603430 11826 A C 11816 7361 8782 1 1 Ypestis_CO92_1086850_1107456 Ypestis_Nepal516_3582834_3603430 22 C A 2255 22 22 1 -1 Ypestis_CO92_1178077_1217193 Ypestis_Nepal516_3324219_3326495 102 T C 2175 80 102 1 -1 Ypestis_CO92_1178077_1217193 Ypestis_Nepal516_3324219_3326495 383 T C 1894 281 383 1 -1 Ypestis_CO92_1178077_1217193 Ypestis_Nepal516_3324219_3326495 447 . A 9821 447 447 1 -1 Ypestis_CO92_1234525_1244792 Ypestis_Nepal516_3259083_3269351 18301 T . 9154 8669 9154 1 -1 Ypestis_CO92_1245590_1273045 Ypestis_Nepal516_3230831_3258285 26970 T C 486 486 486 1 -1 Ypestis_CO92_1245590_1273045 Ypestis_Nepal516_3230831_3258285 1416 T G 33393 1416 1416 1 -1 Ypestis_CO92_1273227_1278059 Ypestis_Nepal516_3195841_3230649 10161 G . 19804 1 10161 1 -1 Ypestis_CO92_1280030_1310035 Ypestis_Nepal516_3195841_3230649 10162 C . 19804 1 10162 1 -1 Ypestis_CO92_1280030_1310035 Ypestis_Nepal516_3195841_3230649 10163 T . 19804 1 10163 1 -1 Ypestis_CO92_1280030_1310035 Ypestis_Nepal516_3195841_3230649 10164 A . 19804 1 10164 1 -1 Ypestis_CO92_1280030_1310035 Ypestis_Nepal516_3195841_3230649 10165 A . 19804 1 10165 1 -1 Ypestis_CO92_1280030_1310035 Ypestis_Nepal516_3195841_3230649 10166 A . 19804 1 10166 1 -1 Ypestis_CO92_1280030_1310035 Ypestis_Nepal516_3195841_3230649 10167 C . 19804 1 10167 1 -1 Ypestis_CO92_1280030_1310035 Ypestis_Nepal516_3195841_3230649 10168 A . 19804 1 10168 1 -1 Ypestis_CO92_1280030_1310035 Ypestis_Nepal516_3195841_3230649 10169 A . 19804 1 10169 1 -1 Ypestis_CO92_1280030_1310035 Ypestis_Nepal516_3195841_3230649 10170 C . 19804 1 10170 1 -1 Ypestis_CO92_1280030_1310035 Ypestis_Nepal516_3195841_3230649 10171 A . 19804 1 10171 1 -1 Ypestis_CO92_1280030_1310035 Ypestis_Nepal516_3195841_3230649 10172 T . 19804 1 10172 1 -1 Ypestis_CO92_1280030_1310035 Ypestis_Nepal516_3195841_3230649 10173 A . 19804 1 10173 1 -1 Ypestis_CO92_1280030_1310035 Ypestis_Nepal516_3195841_3230649 10174 G . 19804 1 10174 1 -1 Ypestis_CO92_1280030_1310035 Ypestis_Nepal516_3195841_3230649 10175 A . 19804 1 10175 1 -1 Ypestis_CO92_1280030_1310035 Ypestis_Nepal516_3195841_3230649 10176 T . 19804 1 10176 1 -1 Ypestis_CO92_1280030_1310035 Ypestis_Nepal516_3195841_3230649 10177 A . 19804 1 10177 1 -1 Ypestis_CO92_1280030_1310035 Ypestis_Nepal516_3195841_3230649 10178 G . 19804 1 10178 1 -1 Ypestis_CO92_1280030_1310035 Ypestis_Nepal516_3195841_3230649 10179 C . 19804 1 10179 1 -1 Ypestis_CO92_1280030_1310035 Ypestis_Nepal516_3195841_3230649 10180 T . 19804 1 10180 1 -1 Ypestis_CO92_1280030_1310035 Ypestis_Nepal516_3195841_3230649 10181 A . 19804 1 10181 1 -1 Ypestis_CO92_1280030_1310035 Ypestis_Nepal516_3195841_3230649 10182 A . 19804 1 10182 1 -1 Ypestis_CO92_1280030_1310035 Ypestis_Nepal516_3195841_3230649 10183 A . 19804 1 10183 1 -1 Ypestis_CO92_1280030_1310035 Ypestis_Nepal516_3195841_3230649 10184 C . 19804 1 10184 1 -1 Ypestis_CO92_1280030_1310035 Ypestis_Nepal516_3195841_3230649 10185 A . 19804 1 10185 1 -1 Ypestis_CO92_1280030_1310035 Ypestis_Nepal516_3195841_3230649 10186 A . 19804 1 10186 1 -1 Ypestis_CO92_1280030_1310035 Ypestis_Nepal516_3195841_3230649 10187 C . 19804 1 10187 1 -1 Ypestis_CO92_1280030_1310035 Ypestis_Nepal516_3195841_3230649 10188 A . 19804 1 10188 1 -1 Ypestis_CO92_1280030_1310035 Ypestis_Nepal516_3195841_3230649 10189 T . 19804 1 10189 1 -1 Ypestis_CO92_1280030_1310035 Ypestis_Nepal516_3195841_3230649 10190 A . 19804 1 10190 1 -1 Ypestis_CO92_1280030_1310035 Ypestis_Nepal516_3195841_3230649 10191 G . 19804 1 10191 1 -1 Ypestis_CO92_1280030_1310035 Ypestis_Nepal516_3195841_3230649 10192 A . 19804 1 10192 1 -1 Ypestis_CO92_1280030_1310035 Ypestis_Nepal516_3195841_3230649 10193 T . 19804 1 10193 1 -1 Ypestis_CO92_1280030_1310035 Ypestis_Nepal516_3195841_3230649 10194 A . 19804 1 10194 1 -1 Ypestis_CO92_1280030_1310035 Ypestis_Nepal516_3195841_3230649 15693 . G 14294 0 14294 1 -1 Ypestis_CO92_1280030_1310035 Ypestis_Nepal516_3195841_3230649 15693 . A 14295 0 14295 1 -1 Ypestis_CO92_1280030_1310035 Ypestis_Nepal516_3195841_3230649 15693 . C 14296 0 14296 1 -1 Ypestis_CO92_1280030_1310035 Ypestis_Nepal516_3195841_3230649 15693 . G 14297 0 14297 1 -1 Ypestis_CO92_1280030_1310035 Ypestis_Nepal516_3195841_3230649 15693 . C 14298 0 14298 1 -1 Ypestis_CO92_1280030_1310035 Ypestis_Nepal516_3195841_3230649 15693 . C 14299 0 14299 1 -1 Ypestis_CO92_1280030_1310035 Ypestis_Nepal516_3195841_3230649 15693 . G 14300 0 14300 1 -1 Ypestis_CO92_1280030_1310035 Ypestis_Nepal516_3195841_3230649 15693 . G 14301 0 14301 1 -1 Ypestis_CO92_1280030_1310035 Ypestis_Nepal516_3195841_3230649 15693 . C 14302 0 14302 1 -1 Ypestis_CO92_1280030_1310035 Ypestis_Nepal516_3195841_3230649 15693 . A 14303 0 14303 1 -1 Ypestis_CO92_1280030_1310035 Ypestis_Nepal516_3195841_3230649 15693 . C 14304 0 14304 1 -1 Ypestis_CO92_1280030_1310035 Ypestis_Nepal516_3195841_3230649 15693 . C 14305 0 14305 1 -1 Ypestis_CO92_1280030_1310035 Ypestis_Nepal516_3195841_3230649 20824 A . 9163 1 9163 1 -1 Ypestis_CO92_1280030_1310035 Ypestis_Nepal516_3195841_3230649 20825 G . 9163 1 9163 1 -1 Ypestis_CO92_1280030_1310035 Ypestis_Nepal516_3195841_3230649 20826 T . 9163 1 9163 1 -1 Ypestis_CO92_1280030_1310035 Ypestis_Nepal516_3195841_3230649 20827 A . 9163 1 9163 1 -1 Ypestis_CO92_1280030_1310035 Ypestis_Nepal516_3195841_3230649 20828 T . 9163 1 9163 1 -1 Ypestis_CO92_1280030_1310035 Ypestis_Nepal516_3195841_3230649 20829 G . 9163 1 9163 1 -1 Ypestis_CO92_1280030_1310035 Ypestis_Nepal516_3195841_3230649 20830 G . 9163 1 9163 1 -1 Ypestis_CO92_1280030_1310035 Ypestis_Nepal516_3195841_3230649 20831 T . 9163 1 9163 1 -1 Ypestis_CO92_1280030_1310035 Ypestis_Nepal516_3195841_3230649 20832 T . 9163 1 9163 1 -1 Ypestis_CO92_1280030_1310035 Ypestis_Nepal516_3195841_3230649 20833 A . 9163 1 9163 1 -1 Ypestis_CO92_1280030_1310035 Ypestis_Nepal516_3195841_3230649 20834 A . 9163 1 9163 1 -1 Ypestis_CO92_1280030_1310035 Ypestis_Nepal516_3195841_3230649 20835 T . 9163 1 9163 1 -1 Ypestis_CO92_1280030_1310035 Ypestis_Nepal516_3195841_3230649 20836 C . 9163 1 9163 1 -1 Ypestis_CO92_1280030_1310035 Ypestis_Nepal516_3195841_3230649 20837 T . 9163 1 9163 1 -1 Ypestis_CO92_1280030_1310035 Ypestis_Nepal516_3195841_3230649 20838 A . 9163 1 9163 1 -1 Ypestis_CO92_1280030_1310035 Ypestis_Nepal516_3195841_3230649 20839 C . 9163 1 9163 1 -1 Ypestis_CO92_1280030_1310035 Ypestis_Nepal516_3195841_3230649 20840 C . 9163 1 9163 1 -1 Ypestis_CO92_1280030_1310035 Ypestis_Nepal516_3195841_3230649 20841 C . 9163 1 9163 1 -1 Ypestis_CO92_1280030_1310035 Ypestis_Nepal516_3195841_3230649 20842 G . 9163 1 9163 1 -1 Ypestis_CO92_1280030_1310035 Ypestis_Nepal516_3195841_3230649 26689 T C 3317 3317 3317 1 -1 Ypestis_CO92_1280030_1310035 Ypestis_Nepal516_3195841_3230649 2003 G A 2331 2003 2003 1 -1 Ypestis_CO92_128641_190047 Ypestis_Nepal516_4487316_4491649 7169 C A 54996 2841 2841 1 -1 Ypestis_CO92_128641_190047 Ypestis_Nepal516_4427526_4485361 22306 C A 39859 4801 17978 1 -1 Ypestis_CO92_128641_190047 Ypestis_Nepal516_4427526_4485361 27107 A G 35058 4801 22779 1 -1 Ypestis_CO92_128641_190047 Ypestis_Nepal516_4427526_4485361 45927 . T 16214 0 15481 1 -1 Ypestis_CO92_128641_190047 Ypestis_Nepal516_4427526_4485361 45927 . A 16215 0 15481 1 -1 Ypestis_CO92_128641_190047 Ypestis_Nepal516_4427526_4485361 45927 . A 16216 0 15481 1 -1 Ypestis_CO92_128641_190047 Ypestis_Nepal516_4427526_4485361 45927 . C 16217 0 15481 1 -1 Ypestis_CO92_128641_190047 Ypestis_Nepal516_4427526_4485361 45927 . A 16218 0 15481 1 -1 Ypestis_CO92_128641_190047 Ypestis_Nepal516_4427526_4485361 45927 . G 16219 0 15481 1 -1 Ypestis_CO92_128641_190047 Ypestis_Nepal516_4427526_4485361 45927 . C 16220 0 15481 1 -1 Ypestis_CO92_128641_190047 Ypestis_Nepal516_4427526_4485361 45927 . A 16221 0 15481 1 -1 Ypestis_CO92_128641_190047 Ypestis_Nepal516_4427526_4485361 45927 . A 16222 0 15481 1 -1 Ypestis_CO92_128641_190047 Ypestis_Nepal516_4427526_4485361 45927 . C 16223 0 15481 1 -1 Ypestis_CO92_128641_190047 Ypestis_Nepal516_4427526_4485361 45927 . T 16224 0 15481 1 -1 Ypestis_CO92_128641_190047 Ypestis_Nepal516_4427526_4485361 45927 . A 16225 0 15481 1 -1 Ypestis_CO92_128641_190047 Ypestis_Nepal516_4427526_4485361 45927 . T 16226 0 15481 1 -1 Ypestis_CO92_128641_190047 Ypestis_Nepal516_4427526_4485361 45927 . A 16227 0 15481 1 -1 Ypestis_CO92_128641_190047 Ypestis_Nepal516_4427526_4485361 45927 . A 16228 0 15481 1 -1 Ypestis_CO92_128641_190047 Ypestis_Nepal516_4427526_4485361 45927 . C 16229 0 15481 1 -1 Ypestis_CO92_128641_190047 Ypestis_Nepal516_4427526_4485361 45927 . A 16230 0 15481 1 -1 Ypestis_CO92_128641_190047 Ypestis_Nepal516_4427526_4485361 45927 . G 16231 0 15481 1 -1 Ypestis_CO92_128641_190047 Ypestis_Nepal516_4427526_4485361 45927 . C 16232 0 15481 1 -1 Ypestis_CO92_128641_190047 Ypestis_Nepal516_4427526_4485361 45927 . A 16233 0 15481 1 -1 Ypestis_CO92_128641_190047 Ypestis_Nepal516_4427526_4485361 45927 . A 16234 0 15481 1 -1 Ypestis_CO92_128641_190047 Ypestis_Nepal516_4427526_4485361 45927 . C 16235 0 15481 1 -1 Ypestis_CO92_128641_190047 Ypestis_Nepal516_4427526_4485361 45927 . T 16236 0 15481 1 -1 Ypestis_CO92_128641_190047 Ypestis_Nepal516_4427526_4485361 45927 . A 16237 0 15481 1 -1 Ypestis_CO92_128641_190047 Ypestis_Nepal516_4427526_4485361 54399 T . 7742 4 7009 1 -1 Ypestis_CO92_128641_190047 Ypestis_Nepal516_4427526_4485361 54403 . A 7738 2 7005 1 -1 Ypestis_CO92_128641_190047 Ypestis_Nepal516_4427526_4485361 54405 C T 7736 1 7003 1 -1 Ypestis_CO92_128641_190047 Ypestis_Nepal516_4427526_4485361 54406 C T 7735 1 7002 1 -1 Ypestis_CO92_128641_190047 Ypestis_Nepal516_4427526_4485361 54425 . A 7704 0 6983 1 -1 Ypestis_CO92_128641_190047 Ypestis_Nepal516_4427526_4485361 54425 . C 7705 0 6983 1 -1 Ypestis_CO92_128641_190047 Ypestis_Nepal516_4427526_4485361 54425 . C 7706 0 6983 1 -1 Ypestis_CO92_128641_190047 Ypestis_Nepal516_4427526_4485361 54425 . A 7707 0 6983 1 -1 Ypestis_CO92_128641_190047 Ypestis_Nepal516_4427526_4485361 54425 . C 7708 0 6983 1 -1 Ypestis_CO92_128641_190047 Ypestis_Nepal516_4427526_4485361 54425 . A 7709 0 6983 1 -1 Ypestis_CO92_128641_190047 Ypestis_Nepal516_4427526_4485361 54425 . A 7710 0 6983 1 -1 Ypestis_CO92_128641_190047 Ypestis_Nepal516_4427526_4485361 54425 . C 7711 0 6983 1 -1 Ypestis_CO92_128641_190047 Ypestis_Nepal516_4427526_4485361 54425 . C 7712 0 6983 1 -1 Ypestis_CO92_128641_190047 Ypestis_Nepal516_4427526_4485361 54425 . A 7713 0 6983 1 -1 Ypestis_CO92_128641_190047 Ypestis_Nepal516_4427526_4485361 54425 . C 7714 0 6983 1 -1 Ypestis_CO92_128641_190047 Ypestis_Nepal516_4427526_4485361 54425 . A 7715 0 6983 1 -1 Ypestis_CO92_128641_190047 Ypestis_Nepal516_4427526_4485361 60587 C T 1542 821 821 1 -1 Ypestis_CO92_128641_190047 Ypestis_Nepal516_4427526_4485361 5161 . T 5186 0 5161 1 -1 Ypestis_CO92_1310774_1321120 Ypestis_Nepal516_3184729_3195102 5161 . C 5187 0 5161 1 -1 Ypestis_CO92_1310774_1321120 Ypestis_Nepal516_3184729_3195102 5161 . G 5188 0 5161 1 -1 Ypestis_CO92_1310774_1321120 Ypestis_Nepal516_3184729_3195102 5161 . T 5189 0 5161 1 -1 Ypestis_CO92_1310774_1321120 Ypestis_Nepal516_3184729_3195102 5161 . C 5190 0 5161 1 -1 Ypestis_CO92_1310774_1321120 Ypestis_Nepal516_3184729_3195102 5161 . C 5191 0 5161 1 -1 Ypestis_CO92_1310774_1321120 Ypestis_Nepal516_3184729_3195102 5161 . T 5192 0 5161 1 -1 Ypestis_CO92_1310774_1321120 Ypestis_Nepal516_3184729_3195102 5161 . T 5193 0 5161 1 -1 Ypestis_CO92_1310774_1321120 Ypestis_Nepal516_3184729_3195102 5161 . A 5194 0 5161 1 -1 Ypestis_CO92_1310774_1321120 Ypestis_Nepal516_3184729_3195102 5161 . A 5195 0 5161 1 -1 Ypestis_CO92_1310774_1321120 Ypestis_Nepal516_3184729_3195102 5161 . G 5196 0 5161 1 -1 Ypestis_CO92_1310774_1321120 Ypestis_Nepal516_3184729_3195102 5161 . G 5197 0 5161 1 -1 Ypestis_CO92_1310774_1321120 Ypestis_Nepal516_3184729_3195102 5161 . C 5198 0 5161 1 -1 Ypestis_CO92_1310774_1321120 Ypestis_Nepal516_3184729_3195102 5161 . A 5199 0 5161 1 -1 Ypestis_CO92_1310774_1321120 Ypestis_Nepal516_3184729_3195102 5161 . C 5200 0 5161 1 -1 Ypestis_CO92_1310774_1321120 Ypestis_Nepal516_3184729_3195102 5161 . A 5201 0 5161 1 -1 Ypestis_CO92_1310774_1321120 Ypestis_Nepal516_3184729_3195102 5161 . A 5202 0 5161 1 -1 Ypestis_CO92_1310774_1321120 Ypestis_Nepal516_3184729_3195102 5161 . G 5203 0 5161 1 -1 Ypestis_CO92_1310774_1321120 Ypestis_Nepal516_3184729_3195102 5161 . G 5204 0 5161 1 -1 Ypestis_CO92_1310774_1321120 Ypestis_Nepal516_3184729_3195102 5161 . G 5205 0 5161 1 -1 Ypestis_CO92_1310774_1321120 Ypestis_Nepal516_3184729_3195102 5161 . G 5206 0 5161 1 -1 Ypestis_CO92_1310774_1321120 Ypestis_Nepal516_3184729_3195102 5161 . G 5207 0 5161 1 -1 Ypestis_CO92_1310774_1321120 Ypestis_Nepal516_3184729_3195102 5161 . T 5208 0 5161 1 -1 Ypestis_CO92_1310774_1321120 Ypestis_Nepal516_3184729_3195102 5161 . C 5209 0 5161 1 -1 Ypestis_CO92_1310774_1321120 Ypestis_Nepal516_3184729_3195102 5161 . T 5210 0 5161 1 -1 Ypestis_CO92_1310774_1321120 Ypestis_Nepal516_3184729_3195102 5161 . T 5211 0 5161 1 -1 Ypestis_CO92_1310774_1321120 Ypestis_Nepal516_3184729_3195102 5161 . G 5212 0 5161 1 -1 Ypestis_CO92_1310774_1321120 Ypestis_Nepal516_3184729_3195102 13438 . T 48070 0 13438 1 -1 Ypestis_CO92_1321848_1383318 Ypestis_Nepal516_3100413_3161927 13438 . A 48071 0 13438 1 -1 Ypestis_CO92_1321848_1383318 Ypestis_Nepal516_3100413_3161927 13438 . A 48072 0 13438 1 -1 Ypestis_CO92_1321848_1383318 Ypestis_Nepal516_3100413_3161927 13438 . T 48073 0 13438 1 -1 Ypestis_CO92_1321848_1383318 Ypestis_Nepal516_3100413_3161927 13438 . T 48074 0 13438 1 -1 Ypestis_CO92_1321848_1383318 Ypestis_Nepal516_3100413_3161927 13438 . G 48075 0 13438 1 -1 Ypestis_CO92_1321848_1383318 Ypestis_Nepal516_3100413_3161927 13438 . A 48076 0 13438 1 -1 Ypestis_CO92_1321848_1383318 Ypestis_Nepal516_3100413_3161927 27895 T . 33564 1 27895 1 -1 Ypestis_CO92_1321848_1383318 Ypestis_Nepal516_3100413_3161927 27896 A . 33564 1 27896 1 -1 Ypestis_CO92_1321848_1383318 Ypestis_Nepal516_3100413_3161927 27897 G . 33564 1 27897 1 -1 Ypestis_CO92_1321848_1383318 Ypestis_Nepal516_3100413_3161927 27898 T . 33564 1 27898 1 -1 Ypestis_CO92_1321848_1383318 Ypestis_Nepal516_3100413_3161927 27899 A . 33564 1 27899 1 -1 Ypestis_CO92_1321848_1383318 Ypestis_Nepal516_3100413_3161927 27900 A . 33564 1 27900 1 -1 Ypestis_CO92_1321848_1383318 Ypestis_Nepal516_3100413_3161927 27901 T . 33564 1 27901 1 -1 Ypestis_CO92_1321848_1383318 Ypestis_Nepal516_3100413_3161927 27902 A . 33564 1 27902 1 -1 Ypestis_CO92_1321848_1383318 Ypestis_Nepal516_3100413_3161927 27903 G . 33564 1 27903 1 -1 Ypestis_CO92_1321848_1383318 Ypestis_Nepal516_3100413_3161927 27904 T . 33564 1 27904 1 -1 Ypestis_CO92_1321848_1383318 Ypestis_Nepal516_3100413_3161927 27905 A . 33564 1 27905 1 -1 Ypestis_CO92_1321848_1383318 Ypestis_Nepal516_3100413_3161927 27906 A . 33564 1 27906 1 -1 Ypestis_CO92_1321848_1383318 Ypestis_Nepal516_3100413_3161927 28921 C A 32550 1015 28921 1 -1 Ypestis_CO92_1321848_1383318 Ypestis_Nepal516_3100413_3161927 1242 T C 18051 1242 1242 1 -1 Ypestis_CO92_1384539_1403817 Ypestis_Nepal516_3079900_3099192 6757 T . 12536 1 6757 1 -1 Ypestis_CO92_1384539_1403817 Ypestis_Nepal516_3079900_3099192 6758 G . 12536 1 6758 1 -1 Ypestis_CO92_1384539_1403817 Ypestis_Nepal516_3079900_3099192 6759 T . 12536 1 6758 1 -1 Ypestis_CO92_1384539_1403817 Ypestis_Nepal516_3079900_3099192 6760 A . 12536 1 6758 1 -1 Ypestis_CO92_1384539_1403817 Ypestis_Nepal516_3079900_3099192 6761 T . 12536 1 6758 1 -1 Ypestis_CO92_1384539_1403817 Ypestis_Nepal516_3079900_3099192 6762 T . 12536 1 6758 1 -1 Ypestis_CO92_1384539_1403817 Ypestis_Nepal516_3079900_3099192 6763 G . 12536 1 6758 1 -1 Ypestis_CO92_1384539_1403817 Ypestis_Nepal516_3079900_3099192 6764 T . 12536 1 6758 1 -1 Ypestis_CO92_1384539_1403817 Ypestis_Nepal516_3079900_3099192 6765 G . 12536 1 6758 1 -1 Ypestis_CO92_1384539_1403817 Ypestis_Nepal516_3079900_3099192 6766 T . 12536 1 6758 1 -1 Ypestis_CO92_1384539_1403817 Ypestis_Nepal516_3079900_3099192 6767 A . 12536 1 6758 1 -1 Ypestis_CO92_1384539_1403817 Ypestis_Nepal516_3079900_3099192 6768 C . 12536 1 6758 1 -1 Ypestis_CO92_1384539_1403817 Ypestis_Nepal516_3079900_3099192 6769 A . 12536 1 6758 1 -1 Ypestis_CO92_1384539_1403817 Ypestis_Nepal516_3079900_3099192 6770 G . 12536 1 6758 1 -1 Ypestis_CO92_1384539_1403817 Ypestis_Nepal516_3079900_3099192 6771 A . 12536 1 6758 1 -1 Ypestis_CO92_1384539_1403817 Ypestis_Nepal516_3079900_3099192 11406 . G 7884 0 7874 1 -1 Ypestis_CO92_1384539_1403817 Ypestis_Nepal516_3079900_3099192 11406 . T 7885 0 7874 1 -1 Ypestis_CO92_1384539_1403817 Ypestis_Nepal516_3079900_3099192 11406 . T 7886 0 7874 1 -1 Ypestis_CO92_1384539_1403817 Ypestis_Nepal516_3079900_3099192 11406 . T 7887 0 7874 1 -1 Ypestis_CO92_1384539_1403817 Ypestis_Nepal516_3079900_3099192 11406 . C 7888 0 7874 1 -1 Ypestis_CO92_1384539_1403817 Ypestis_Nepal516_3079900_3099192 11406 . T 7889 0 7874 1 -1 Ypestis_CO92_1384539_1403817 Ypestis_Nepal516_3079900_3099192 11406 . A 7890 0 7874 1 -1 Ypestis_CO92_1384539_1403817 Ypestis_Nepal516_3079900_3099192 11406 . C 7891 0 7874 1 -1 Ypestis_CO92_1384539_1403817 Ypestis_Nepal516_3079900_3099192 11406 . C 7892 0 7874 1 -1 Ypestis_CO92_1384539_1403817 Ypestis_Nepal516_3079900_3099192 11406 . A 7893 0 7874 1 -1 Ypestis_CO92_1384539_1403817 Ypestis_Nepal516_3079900_3099192 11406 . C 7894 0 7874 1 -1 Ypestis_CO92_1384539_1403817 Ypestis_Nepal516_3079900_3099192 11406 . C 7895 0 7874 1 -1 Ypestis_CO92_1384539_1403817 Ypestis_Nepal516_3079900_3099192 11406 . G 7896 0 7874 1 -1 Ypestis_CO92_1384539_1403817 Ypestis_Nepal516_3079900_3099192 11406 . C 7897 0 7874 1 -1 Ypestis_CO92_1384539_1403817 Ypestis_Nepal516_3079900_3099192 11406 . C 7898 0 7874 1 -1 Ypestis_CO92_1384539_1403817 Ypestis_Nepal516_3079900_3099192 11406 . G 7899 0 7874 1 -1 Ypestis_CO92_1384539_1403817 Ypestis_Nepal516_3079900_3099192 11406 . A 7900 0 7874 1 -1 Ypestis_CO92_1384539_1403817 Ypestis_Nepal516_3079900_3099192 11406 . G 7901 0 7874 1 -1 Ypestis_CO92_1384539_1403817 Ypestis_Nepal516_3079900_3099192 13639 A . 5651 1 5641 1 -1 Ypestis_CO92_1384539_1403817 Ypestis_Nepal516_3079900_3099192 13640 A . 5651 1 5640 1 -1 Ypestis_CO92_1384539_1403817 Ypestis_Nepal516_3079900_3099192 13641 A . 5651 1 5639 1 -1 Ypestis_CO92_1384539_1403817 Ypestis_Nepal516_3079900_3099192 13642 A . 5651 1 5638 1 -1 Ypestis_CO92_1384539_1403817 Ypestis_Nepal516_3079900_3099192 13643 A . 5651 1 5637 1 -1 Ypestis_CO92_1384539_1403817 Ypestis_Nepal516_3079900_3099192 13644 T . 5651 1 5636 1 -1 Ypestis_CO92_1384539_1403817 Ypestis_Nepal516_3079900_3099192 14259 . A 5020 0 5020 1 -1 Ypestis_CO92_1384539_1403817 Ypestis_Nepal516_3079900_3099192 14259 . A 5021 0 5021 1 -1 Ypestis_CO92_1384539_1403817 Ypestis_Nepal516_3079900_3099192 14259 . A 5022 0 5021 1 -1 Ypestis_CO92_1384539_1403817 Ypestis_Nepal516_3079900_3099192 14259 . T 5023 0 5021 1 -1 Ypestis_CO92_1384539_1403817 Ypestis_Nepal516_3079900_3099192 14259 . A 5024 0 5021 1 -1 Ypestis_CO92_1384539_1403817 Ypestis_Nepal516_3079900_3099192 14259 . G 5025 0 5021 1 -1 Ypestis_CO92_1384539_1403817 Ypestis_Nepal516_3079900_3099192 14259 . T 5026 0 5021 1 -1 Ypestis_CO92_1384539_1403817 Ypestis_Nepal516_3079900_3099192 14259 . G 5027 0 5021 1 -1 Ypestis_CO92_1384539_1403817 Ypestis_Nepal516_3079900_3099192 14259 . G 5028 0 5021 1 -1 Ypestis_CO92_1384539_1403817 Ypestis_Nepal516_3079900_3099192 14259 . A 5029 0 5021 1 -1 Ypestis_CO92_1384539_1403817 Ypestis_Nepal516_3079900_3099192 14259 . G 5030 0 5021 1 -1 Ypestis_CO92_1384539_1403817 Ypestis_Nepal516_3079900_3099192 14259 . G 5031 0 5021 1 -1 Ypestis_CO92_1384539_1403817 Ypestis_Nepal516_3079900_3099192 14259 . C 5032 0 5021 1 -1 Ypestis_CO92_1384539_1403817 Ypestis_Nepal516_3079900_3099192 14259 . A 5033 0 5021 1 -1 Ypestis_CO92_1384539_1403817 Ypestis_Nepal516_3079900_3099192 14259 . T 5034 0 5021 1 -1 Ypestis_CO92_1384539_1403817 Ypestis_Nepal516_3079900_3099192 14259 . G 5035 0 5021 1 -1 Ypestis_CO92_1384539_1403817 Ypestis_Nepal516_3079900_3099192 14259 . A 5036 0 5021 1 -1 Ypestis_CO92_1384539_1403817 Ypestis_Nepal516_3079900_3099192 309 C T 9460 309 309 1 -1 Ypestis_CO92_1403989_1413757 Ypestis_Nepal516_3069960_3079728 3649 A C 529 529 529 1 -1 Ypestis_CO92_1415847_1420024 Ypestis_Nepal516_3063693_3067814 3447 T . 95479 1 3447 1 -1 Ypestis_CO92_1420759_1502730 Ypestis_Nepal516_2964033_3062958 3448 T . 95479 1 3448 1 -1 Ypestis_CO92_1420759_1502730 Ypestis_Nepal516_2964033_3062958 3449 G . 95479 1 3448 1 -1 Ypestis_CO92_1420759_1502730 Ypestis_Nepal516_2964033_3062958 3450 T . 95479 1 3448 1 -1 Ypestis_CO92_1420759_1502730 Ypestis_Nepal516_2964033_3062958 3451 A . 95479 1 3448 1 -1 Ypestis_CO92_1420759_1502730 Ypestis_Nepal516_2964033_3062958 3452 A . 95479 1 3448 1 -1 Ypestis_CO92_1420759_1502730 Ypestis_Nepal516_2964033_3062958 3453 T . 95479 1 3448 1 -1 Ypestis_CO92_1420759_1502730 Ypestis_Nepal516_2964033_3062958 3454 G . 95479 1 3448 1 -1 Ypestis_CO92_1420759_1502730 Ypestis_Nepal516_2964033_3062958 3455 A . 95479 1 3448 1 -1 Ypestis_CO92_1420759_1502730 Ypestis_Nepal516_2964033_3062958 3456 G . 95479 1 3448 1 -1 Ypestis_CO92_1420759_1502730 Ypestis_Nepal516_2964033_3062958 3457 A . 95479 1 3448 1 -1 Ypestis_CO92_1420759_1502730 Ypestis_Nepal516_2964033_3062958 3458 T . 95479 1 3448 1 -1 Ypestis_CO92_1420759_1502730 Ypestis_Nepal516_2964033_3062958 3459 T . 95479 1 3448 1 -1 Ypestis_CO92_1420759_1502730 Ypestis_Nepal516_2964033_3062958 3460 G . 95479 1 3448 1 -1 Ypestis_CO92_1420759_1502730 Ypestis_Nepal516_2964033_3062958 3461 T . 95479 1 3448 1 -1 Ypestis_CO92_1420759_1502730 Ypestis_Nepal516_2964033_3062958 67284 T . 31673 14689 14689 1 -1 Ypestis_CO92_1420759_1502730 Ypestis_Nepal516_2964033_3062958 8230 A G 8745 1479 8230 1 -1 Ypestis_CO92_1504701_1521676 Ypestis_Nepal516_2964033_3062958 9709 C . 7266 1479 7266 1 -1 Ypestis_CO92_1504701_1521676 Ypestis_Nepal516_2964033_3062958 15527 . T 757 0 757 1 -1 Ypestis_CO92_1538501_1593038 Ypestis_Nepal516_2930917_2947208 15527 . T 758 0 758 1 -1 Ypestis_CO92_1538501_1593038 Ypestis_Nepal516_2930917_2947208 15527 . A 759 0 759 1 -1 Ypestis_CO92_1538501_1593038 Ypestis_Nepal516_2930917_2947208 15527 . A 760 0 760 1 -1 Ypestis_CO92_1538501_1593038 Ypestis_Nepal516_2930917_2947208 15527 . T 761 0 761 1 -1 Ypestis_CO92_1538501_1593038 Ypestis_Nepal516_2930917_2947208 15527 . T 762 0 762 1 -1 Ypestis_CO92_1538501_1593038 Ypestis_Nepal516_2930917_2947208 15527 . G 763 0 763 1 -1 Ypestis_CO92_1538501_1593038 Ypestis_Nepal516_2930917_2947208 15527 . G 764 0 764 1 -1 Ypestis_CO92_1538501_1593038 Ypestis_Nepal516_2930917_2947208 9413 G . 11629 1 9413 1 -1 Ypestis_CO92_1597647_1618697 Ypestis_Nepal516_2865063_2886104 9414 G . 11629 1 9414 1 -1 Ypestis_CO92_1597647_1618697 Ypestis_Nepal516_2865063_2886104 9415 A . 11629 1 9414 1 -1 Ypestis_CO92_1597647_1618697 Ypestis_Nepal516_2865063_2886104 9416 T . 11629 1 9414 1 -1 Ypestis_CO92_1597647_1618697 Ypestis_Nepal516_2865063_2886104 9417 A . 11629 1 9414 1 -1 Ypestis_CO92_1597647_1618697 Ypestis_Nepal516_2865063_2886104 9418 G . 11629 1 9414 1 -1 Ypestis_CO92_1597647_1618697 Ypestis_Nepal516_2865063_2886104 9419 T . 11629 1 9414 1 -1 Ypestis_CO92_1597647_1618697 Ypestis_Nepal516_2865063_2886104 9420 C . 11629 1 9414 1 -1 Ypestis_CO92_1597647_1618697 Ypestis_Nepal516_2865063_2886104 9421 G . 11629 1 9414 1 -1 Ypestis_CO92_1597647_1618697 Ypestis_Nepal516_2865063_2886104 6135 A C 31832 1272 6135 1 -1 Ypestis_CO92_1729129_1767068 Ypestis_Nepal516_2717865_2755831 7407 . C 30533 0 7407 1 -1 Ypestis_CO92_1729129_1767068 Ypestis_Nepal516_2717865_2755831 7407 . T 30534 0 7407 1 -1 Ypestis_CO92_1729129_1767068 Ypestis_Nepal516_2717865_2755831 7407 . T 30535 0 7407 1 -1 Ypestis_CO92_1729129_1767068 Ypestis_Nepal516_2717865_2755831 7407 . C 30536 0 7407 1 -1 Ypestis_CO92_1729129_1767068 Ypestis_Nepal516_2717865_2755831 7407 . T 30537 0 7407 1 -1 Ypestis_CO92_1729129_1767068 Ypestis_Nepal516_2717865_2755831 7407 . A 30538 0 7407 1 -1 Ypestis_CO92_1729129_1767068 Ypestis_Nepal516_2717865_2755831 7407 . A 30539 0 7407 1 -1 Ypestis_CO92_1729129_1767068 Ypestis_Nepal516_2717865_2755831 7407 . A 30540 0 7407 1 -1 Ypestis_CO92_1729129_1767068 Ypestis_Nepal516_2717865_2755831 7407 . C 30541 0 7407 1 -1 Ypestis_CO92_1729129_1767068 Ypestis_Nepal516_2717865_2755831 7407 . C 30542 0 7407 1 -1 Ypestis_CO92_1729129_1767068 Ypestis_Nepal516_2717865_2755831 7407 . A 30543 0 7407 1 -1 Ypestis_CO92_1729129_1767068 Ypestis_Nepal516_2717865_2755831 7407 . C 30544 0 7407 1 -1 Ypestis_CO92_1729129_1767068 Ypestis_Nepal516_2717865_2755831 7407 . G 30545 0 7407 1 -1 Ypestis_CO92_1729129_1767068 Ypestis_Nepal516_2717865_2755831 7407 . A 30546 0 7407 1 -1 Ypestis_CO92_1729129_1767068 Ypestis_Nepal516_2717865_2755831 7407 . G 30547 0 7407 1 -1 Ypestis_CO92_1729129_1767068 Ypestis_Nepal516_2717865_2755831 7407 . A 30548 0 7407 1 -1 Ypestis_CO92_1729129_1767068 Ypestis_Nepal516_2717865_2755831 7407 . T 30549 0 7407 1 -1 Ypestis_CO92_1729129_1767068 Ypestis_Nepal516_2717865_2755831 7407 . A 30550 0 7407 1 -1 Ypestis_CO92_1729129_1767068 Ypestis_Nepal516_2717865_2755831 7407 . A 30551 0 7407 1 -1 Ypestis_CO92_1729129_1767068 Ypestis_Nepal516_2717865_2755831 7407 . A 30552 0 7407 1 -1 Ypestis_CO92_1729129_1767068 Ypestis_Nepal516_2717865_2755831 7407 . C 30553 0 7407 1 -1 Ypestis_CO92_1729129_1767068 Ypestis_Nepal516_2717865_2755831 7407 . G 30554 0 7407 1 -1 Ypestis_CO92_1729129_1767068 Ypestis_Nepal516_2717865_2755831 7407 . G 30555 0 7407 1 -1 Ypestis_CO92_1729129_1767068 Ypestis_Nepal516_2717865_2755831 7407 . C 30556 0 7407 1 -1 Ypestis_CO92_1729129_1767068 Ypestis_Nepal516_2717865_2755831 7407 . G 30557 0 7407 1 -1 Ypestis_CO92_1729129_1767068 Ypestis_Nepal516_2717865_2755831 7407 . A 30558 0 7407 1 -1 Ypestis_CO92_1729129_1767068 Ypestis_Nepal516_2717865_2755831 7407 . C 30559 0 7407 1 -1 Ypestis_CO92_1729129_1767068 Ypestis_Nepal516_2717865_2755831 20315 T C 17625 12908 17625 1 -1 Ypestis_CO92_1729129_1767068 Ypestis_Nepal516_2717865_2755831 6789 C T 3835 3835 3835 1 -1 Ypestis_CO92_1767156_1777779 Ypestis_Nepal516_2707154_2717777 634 T C 634 634 634 1 1 Ypestis_CO92_1808313_1811404 Ypestis_Nepal516_2304690_2307780 1770 C . 10508 1 1770 1 -1 Ypestis_CO92_1812731_1818015 Ypestis_Nepal516_2291092_2303369 1771 A . 10508 1 1771 1 -1 Ypestis_CO92_1812731_1818015 Ypestis_Nepal516_2291092_2303369 1772 C . 10508 1 1771 1 -1 Ypestis_CO92_1812731_1818015 Ypestis_Nepal516_2291092_2303369 1773 G . 10508 1 1771 1 -1 Ypestis_CO92_1812731_1818015 Ypestis_Nepal516_2291092_2303369 1774 G . 10508 1 1771 1 -1 Ypestis_CO92_1812731_1818015 Ypestis_Nepal516_2291092_2303369 1775 T . 10508 1 1771 1 -1 Ypestis_CO92_1812731_1818015 Ypestis_Nepal516_2291092_2303369 1776 T . 10508 1 1771 1 -1 Ypestis_CO92_1812731_1818015 Ypestis_Nepal516_2291092_2303369 1777 G . 10508 1 1771 1 -1 Ypestis_CO92_1812731_1818015 Ypestis_Nepal516_2291092_2303369 1778 G . 10508 1 1771 1 -1 Ypestis_CO92_1812731_1818015 Ypestis_Nepal516_2291092_2303369 1779 T . 10508 1 1771 1 -1 Ypestis_CO92_1812731_1818015 Ypestis_Nepal516_2291092_2303369 1780 G . 10508 1 1771 1 -1 Ypestis_CO92_1812731_1818015 Ypestis_Nepal516_2291092_2303369 1781 T . 10508 1 1771 1 -1 Ypestis_CO92_1812731_1818015 Ypestis_Nepal516_2291092_2303369 1782 T . 10508 1 1771 1 -1 Ypestis_CO92_1812731_1818015 Ypestis_Nepal516_2291092_2303369 1783 A . 10508 1 1771 1 -1 Ypestis_CO92_1812731_1818015 Ypestis_Nepal516_2291092_2303369 1784 T . 10508 1 1771 1 -1 Ypestis_CO92_1812731_1818015 Ypestis_Nepal516_2291092_2303369 7488 T C 14798 3842 7488 1 -1 Ypestis_CO92_1906606_1928870 Ypestis_Nepal516_2189879_2212164 11330 . C 10950 0 10936 1 -1 Ypestis_CO92_1906606_1928870 Ypestis_Nepal516_2189879_2212164 11330 . T 10951 0 10936 1 -1 Ypestis_CO92_1906606_1928870 Ypestis_Nepal516_2189879_2212164 11330 . T 10952 0 10936 1 -1 Ypestis_CO92_1906606_1928870 Ypestis_Nepal516_2189879_2212164 11330 . A 10953 0 10936 1 -1 Ypestis_CO92_1906606_1928870 Ypestis_Nepal516_2189879_2212164 11330 . T 10954 0 10936 1 -1 Ypestis_CO92_1906606_1928870 Ypestis_Nepal516_2189879_2212164 11330 . A 10955 0 10936 1 -1 Ypestis_CO92_1906606_1928870 Ypestis_Nepal516_2189879_2212164 14902 . G 7377 3572 7364 1 -1 Ypestis_CO92_1906606_1928870 Ypestis_Nepal516_2189879_2212164 19163 C . 3116 1 3103 1 -1 Ypestis_CO92_1906606_1928870 Ypestis_Nepal516_2189879_2212164 19164 G . 3116 1 3102 1 -1 Ypestis_CO92_1906606_1928870 Ypestis_Nepal516_2189879_2212164 19165 C . 3116 1 3101 1 -1 Ypestis_CO92_1906606_1928870 Ypestis_Nepal516_2189879_2212164 19166 C . 3116 1 3100 1 -1 Ypestis_CO92_1906606_1928870 Ypestis_Nepal516_2189879_2212164 19167 A . 3116 1 3099 1 -1 Ypestis_CO92_1906606_1928870 Ypestis_Nepal516_2189879_2212164 19168 T . 3116 1 3098 1 -1 Ypestis_CO92_1906606_1928870 Ypestis_Nepal516_2189879_2212164 19169 A . 3116 1 3097 1 -1 Ypestis_CO92_1906606_1928870 Ypestis_Nepal516_2189879_2212164 19170 A . 3116 1 3096 1 -1 Ypestis_CO92_1906606_1928870 Ypestis_Nepal516_2189879_2212164 19171 C . 3116 1 3095 1 -1 Ypestis_CO92_1906606_1928870 Ypestis_Nepal516_2189879_2212164 19172 A . 3116 1 3094 1 -1 Ypestis_CO92_1906606_1928870 Ypestis_Nepal516_2189879_2212164 19173 A . 3116 1 3093 1 -1 Ypestis_CO92_1906606_1928870 Ypestis_Nepal516_2189879_2212164 19174 C . 3116 1 3092 1 -1 Ypestis_CO92_1906606_1928870 Ypestis_Nepal516_2189879_2212164 19175 A . 3116 1 3091 1 -1 Ypestis_CO92_1906606_1928870 Ypestis_Nepal516_2189879_2212164 19176 C . 3116 1 3090 1 -1 Ypestis_CO92_1906606_1928870 Ypestis_Nepal516_2189879_2212164 21883 . A 382 0 382 1 -1 Ypestis_CO92_1906606_1928870 Ypestis_Nepal516_2189879_2212164 21883 . T 383 0 383 1 -1 Ypestis_CO92_1906606_1928870 Ypestis_Nepal516_2189879_2212164 21883 . C 384 0 383 1 -1 Ypestis_CO92_1906606_1928870 Ypestis_Nepal516_2189879_2212164 21883 . T 385 0 383 1 -1 Ypestis_CO92_1906606_1928870 Ypestis_Nepal516_2189879_2212164 21883 . A 386 0 383 1 -1 Ypestis_CO92_1906606_1928870 Ypestis_Nepal516_2189879_2212164 21883 . T 387 0 383 1 -1 Ypestis_CO92_1906606_1928870 Ypestis_Nepal516_2189879_2212164 21883 . C 388 0 383 1 -1 Ypestis_CO92_1906606_1928870 Ypestis_Nepal516_2189879_2212164 21883 . T 389 0 383 1 -1 Ypestis_CO92_1906606_1928870 Ypestis_Nepal516_2189879_2212164 21883 . A 390 0 383 1 -1 Ypestis_CO92_1906606_1928870 Ypestis_Nepal516_2189879_2212164 21883 . T 391 0 383 1 -1 Ypestis_CO92_1906606_1928870 Ypestis_Nepal516_2189879_2212164 21883 . C 392 0 383 1 -1 Ypestis_CO92_1906606_1928870 Ypestis_Nepal516_2189879_2212164 21883 . T 393 0 383 1 -1 Ypestis_CO92_1906606_1928870 Ypestis_Nepal516_2189879_2212164 21883 . A 394 0 383 1 -1 Ypestis_CO92_1906606_1928870 Ypestis_Nepal516_2189879_2212164 21883 . T 395 0 383 1 -1 Ypestis_CO92_1906606_1928870 Ypestis_Nepal516_2189879_2212164 21883 . C 396 0 383 1 -1 Ypestis_CO92_1906606_1928870 Ypestis_Nepal516_2189879_2212164 21883 . T 397 0 383 1 -1 Ypestis_CO92_1906606_1928870 Ypestis_Nepal516_2189879_2212164 21883 . A 398 0 383 1 -1 Ypestis_CO92_1906606_1928870 Ypestis_Nepal516_2189879_2212164 21883 . T 399 0 383 1 -1 Ypestis_CO92_1906606_1928870 Ypestis_Nepal516_2189879_2212164 21883 . C 400 0 383 1 -1 Ypestis_CO92_1906606_1928870 Ypestis_Nepal516_2189879_2212164 21883 . T 401 0 383 1 -1 Ypestis_CO92_1906606_1928870 Ypestis_Nepal516_2189879_2212164 21883 . A 402 0 383 1 -1 Ypestis_CO92_1906606_1928870 Ypestis_Nepal516_2189879_2212164 21883 . T 403 0 383 1 -1 Ypestis_CO92_1906606_1928870 Ypestis_Nepal516_2189879_2212164 21883 . C 404 0 383 1 -1 Ypestis_CO92_1906606_1928870 Ypestis_Nepal516_2189879_2212164 21883 . T 405 0 383 1 -1 Ypestis_CO92_1906606_1928870 Ypestis_Nepal516_2189879_2212164 21883 . A 406 0 383 1 -1 Ypestis_CO92_1906606_1928870 Ypestis_Nepal516_2189879_2212164 21883 . T 407 0 383 1 -1 Ypestis_CO92_1906606_1928870 Ypestis_Nepal516_2189879_2212164 21883 . C 408 0 383 1 -1 Ypestis_CO92_1906606_1928870 Ypestis_Nepal516_2189879_2212164 21883 . T 409 0 383 1 -1 Ypestis_CO92_1906606_1928870 Ypestis_Nepal516_2189879_2212164 1614 . C 1615 0 1614 1 1 Ypestis_CO92_19154_25975 Ypestis_Nepal516_300129_306960 1614 . G 1616 0 1614 1 1 Ypestis_CO92_19154_25975 Ypestis_Nepal516_300129_306960 1614 . C 1617 0 1614 1 1 Ypestis_CO92_19154_25975 Ypestis_Nepal516_300129_306960 1614 . G 1618 0 1614 1 1 Ypestis_CO92_19154_25975 Ypestis_Nepal516_300129_306960 1614 . C 1619 0 1614 1 1 Ypestis_CO92_19154_25975 Ypestis_Nepal516_300129_306960 1614 . T 1620 0 1614 1 1 Ypestis_CO92_19154_25975 Ypestis_Nepal516_300129_306960 1614 . G 1621 0 1614 1 1 Ypestis_CO92_19154_25975 Ypestis_Nepal516_300129_306960 1614 . C 1622 0 1614 1 1 Ypestis_CO92_19154_25975 Ypestis_Nepal516_300129_306960 1614 . T 1623 0 1614 1 1 Ypestis_CO92_19154_25975 Ypestis_Nepal516_300129_306960 1614 . G 1624 0 1614 1 1 Ypestis_CO92_19154_25975 Ypestis_Nepal516_300129_306960 1614 . T 1625 0 1614 1 1 Ypestis_CO92_19154_25975 Ypestis_Nepal516_300129_306960 8999 T G 32297 13 8999 1 -1 Ypestis_CO92_1930830_1972110 Ypestis_Nepal516_2146624_2187919 9012 A G 32284 13 9012 1 -1 Ypestis_CO92_1930830_1972110 Ypestis_Nepal516_2146624_2187919 40836 G A 442 442 442 1 -1 Ypestis_CO92_1930830_1972110 Ypestis_Nepal516_2146624_2187919 221 . G 60776 0 221 1 -1 Ypestis_CO92_1976639_1992553 Ypestis_Nepal516_2612408_2673409 221 . G 60777 0 221 1 -1 Ypestis_CO92_1976639_1992553 Ypestis_Nepal516_2612408_2673409 221 . C 60778 0 221 1 -1 Ypestis_CO92_1976639_1992553 Ypestis_Nepal516_2612408_2673409 221 . T 60779 0 221 1 -1 Ypestis_CO92_1976639_1992553 Ypestis_Nepal516_2612408_2673409 221 . G 60780 0 221 1 -1 Ypestis_CO92_1976639_1992553 Ypestis_Nepal516_2612408_2673409 10916 T C 50081 5000 5000 1 -1 Ypestis_CO92_1976639_1992553 Ypestis_Nepal516_2612408_2673409 1522 . C 43555 1522 1522 1 -1 Ypestis_CO92_1994517_2039568 Ypestis_Nepal516_2612408_2673409 27819 A C 17253 8252 17234 1 -1 Ypestis_CO92_1994517_2039568 Ypestis_Nepal516_2612408_2673409 36071 . C 8992 0 8982 1 -1 Ypestis_CO92_1994517_2039568 Ypestis_Nepal516_2612408_2673409 36071 . T 8993 0 8982 1 -1 Ypestis_CO92_1994517_2039568 Ypestis_Nepal516_2612408_2673409 36071 . T 8994 0 8982 1 -1 Ypestis_CO92_1994517_2039568 Ypestis_Nepal516_2612408_2673409 36071 . T 8995 0 8982 1 -1 Ypestis_CO92_1994517_2039568 Ypestis_Nepal516_2612408_2673409 36071 . T 8996 0 8982 1 -1 Ypestis_CO92_1994517_2039568 Ypestis_Nepal516_2612408_2673409 36071 . T 8997 0 8982 1 -1 Ypestis_CO92_1994517_2039568 Ypestis_Nepal516_2612408_2673409 36071 . G 8998 0 8982 1 -1 Ypestis_CO92_1994517_2039568 Ypestis_Nepal516_2612408_2673409 36071 . T 8999 0 8982 1 -1 Ypestis_CO92_1994517_2039568 Ypestis_Nepal516_2612408_2673409 36071 . T 9000 0 8982 1 -1 Ypestis_CO92_1994517_2039568 Ypestis_Nepal516_2612408_2673409 17 C . 16 17 16 1 1 Ypestis_CO92_1_11817 Ypestis_Nepal516_1_11816 82 C A 81 48 81 1 1 Ypestis_CO92_1_11817 Ypestis_Nepal516_1_11816 130 G C 129 48 129 1 1 Ypestis_CO92_1_11817 Ypestis_Nepal516_1_11816 855 G A 854 725 854 1 1 Ypestis_CO92_1_11817 Ypestis_Nepal516_1_11816 9919 A C 1406 1406 1406 1 -1 Ypestis_CO92_2040309_2051633 Ypestis_Nepal516_2600354_2611678 11468 T G 29429 9913 11468 1 -1 Ypestis_CO92_2052326_2093190 Ypestis_Nepal516_2558765_2599661 21381 C T 19516 4040 19485 1 -1 Ypestis_CO92_2052326_2093190 Ypestis_Nepal516_2558765_2599661 25421 . T 15444 0 15444 1 -1 Ypestis_CO92_2052326_2093190 Ypestis_Nepal516_2558765_2599661 25421 . T 15445 0 15445 1 -1 Ypestis_CO92_2052326_2093190 Ypestis_Nepal516_2558765_2599661 25421 . C 15446 0 15445 1 -1 Ypestis_CO92_2052326_2093190 Ypestis_Nepal516_2558765_2599661 25421 . C 15447 0 15445 1 -1 Ypestis_CO92_2052326_2093190 Ypestis_Nepal516_2558765_2599661 25421 . A 15448 0 15445 1 -1 Ypestis_CO92_2052326_2093190 Ypestis_Nepal516_2558765_2599661 25421 . T 15449 0 15445 1 -1 Ypestis_CO92_2052326_2093190 Ypestis_Nepal516_2558765_2599661 25421 . T 15450 0 15445 1 -1 Ypestis_CO92_2052326_2093190 Ypestis_Nepal516_2558765_2599661 25421 . A 15451 0 15445 1 -1 Ypestis_CO92_2052326_2093190 Ypestis_Nepal516_2558765_2599661 25421 . A 15452 0 15445 1 -1 Ypestis_CO92_2052326_2093190 Ypestis_Nepal516_2558765_2599661 25421 . C 15453 0 15445 1 -1 Ypestis_CO92_2052326_2093190 Ypestis_Nepal516_2558765_2599661 25421 . A 15454 0 15445 1 -1 Ypestis_CO92_2052326_2093190 Ypestis_Nepal516_2558765_2599661 25421 . C 15455 0 15445 1 -1 Ypestis_CO92_2052326_2093190 Ypestis_Nepal516_2558765_2599661 25421 . A 15456 0 15445 1 -1 Ypestis_CO92_2052326_2093190 Ypestis_Nepal516_2558765_2599661 25421 . C 15457 0 15445 1 -1 Ypestis_CO92_2052326_2093190 Ypestis_Nepal516_2558765_2599661 25421 . A 15458 0 15445 1 -1 Ypestis_CO92_2052326_2093190 Ypestis_Nepal516_2558765_2599661 25421 . G 15459 0 15445 1 -1 Ypestis_CO92_2052326_2093190 Ypestis_Nepal516_2558765_2599661 25421 . T 15460 0 15445 1 -1 Ypestis_CO92_2052326_2093190 Ypestis_Nepal516_2558765_2599661 25421 . T 15461 0 15445 1 -1 Ypestis_CO92_2052326_2093190 Ypestis_Nepal516_2558765_2599661 25421 . C 15462 0 15445 1 -1 Ypestis_CO92_2052326_2093190 Ypestis_Nepal516_2558765_2599661 25421 . C 15463 0 15445 1 -1 Ypestis_CO92_2052326_2093190 Ypestis_Nepal516_2558765_2599661 25421 . A 15464 0 15445 1 -1 Ypestis_CO92_2052326_2093190 Ypestis_Nepal516_2558765_2599661 25421 . T 15465 0 15445 1 -1 Ypestis_CO92_2052326_2093190 Ypestis_Nepal516_2558765_2599661 25421 . T 15466 0 15445 1 -1 Ypestis_CO92_2052326_2093190 Ypestis_Nepal516_2558765_2599661 25421 . A 15467 0 15445 1 -1 Ypestis_CO92_2052326_2093190 Ypestis_Nepal516_2558765_2599661 25421 . G 15468 0 15445 1 -1 Ypestis_CO92_2052326_2093190 Ypestis_Nepal516_2558765_2599661 25421 . C 15469 0 15445 1 -1 Ypestis_CO92_2052326_2093190 Ypestis_Nepal516_2558765_2599661 25421 . A 15470 0 15445 1 -1 Ypestis_CO92_2052326_2093190 Ypestis_Nepal516_2558765_2599661 25421 . T 15471 0 15445 1 -1 Ypestis_CO92_2052326_2093190 Ypestis_Nepal516_2558765_2599661 25421 . A 15472 0 15445 1 -1 Ypestis_CO92_2052326_2093190 Ypestis_Nepal516_2558765_2599661 25421 . C 15473 0 15445 1 -1 Ypestis_CO92_2052326_2093190 Ypestis_Nepal516_2558765_2599661 25421 . G 15474 0 15445 1 -1 Ypestis_CO92_2052326_2093190 Ypestis_Nepal516_2558765_2599661 25421 . G 15475 0 15445 1 -1 Ypestis_CO92_2052326_2093190 Ypestis_Nepal516_2558765_2599661 29775 C T 11090 4354 11090 1 -1 Ypestis_CO92_2052326_2093190 Ypestis_Nepal516_2558765_2599661 465 A . 21205 465 465 1 -1 Ypestis_CO92_2093362_2115032 Ypestis_Nepal516_2536924_2558593 5267 T C 16404 4802 5267 1 -1 Ypestis_CO92_2093362_2115032 Ypestis_Nepal516_2536924_2558593 2801 . T 6387 0 2801 1 -1 Ypestis_CO92_2115110_2135454 Ypestis_Nepal516_2527641_2536846 2801 . C 6388 0 2801 1 -1 Ypestis_CO92_2115110_2135454 Ypestis_Nepal516_2527641_2536846 2801 . C 6389 0 2801 1 -1 Ypestis_CO92_2115110_2135454 Ypestis_Nepal516_2527641_2536846 2801 . G 6390 0 2801 1 -1 Ypestis_CO92_2115110_2135454 Ypestis_Nepal516_2527641_2536846 2801 . T 6391 0 2801 1 -1 Ypestis_CO92_2115110_2135454 Ypestis_Nepal516_2527641_2536846 2801 . G 6392 0 2801 1 -1 Ypestis_CO92_2115110_2135454 Ypestis_Nepal516_2527641_2536846 2801 . T 6393 0 2801 1 -1 Ypestis_CO92_2115110_2135454 Ypestis_Nepal516_2527641_2536846 2801 . A 6394 0 2801 1 -1 Ypestis_CO92_2115110_2135454 Ypestis_Nepal516_2527641_2536846 2801 . G 6395 0 2801 1 -1 Ypestis_CO92_2115110_2135454 Ypestis_Nepal516_2527641_2536846 2801 . T 6396 0 2801 1 -1 Ypestis_CO92_2115110_2135454 Ypestis_Nepal516_2527641_2536846 2801 . C 6397 0 2801 1 -1 Ypestis_CO92_2115110_2135454 Ypestis_Nepal516_2527641_2536846 2801 . C 6398 0 2801 1 -1 Ypestis_CO92_2115110_2135454 Ypestis_Nepal516_2527641_2536846 2801 . G 6399 0 2801 1 -1 Ypestis_CO92_2115110_2135454 Ypestis_Nepal516_2527641_2536846 2801 . T 6400 0 2801 1 -1 Ypestis_CO92_2115110_2135454 Ypestis_Nepal516_2527641_2536846 2801 . G 6401 0 2801 1 -1 Ypestis_CO92_2115110_2135454 Ypestis_Nepal516_2527641_2536846 2801 . T 6402 0 2801 1 -1 Ypestis_CO92_2115110_2135454 Ypestis_Nepal516_2527641_2536846 2801 . A 6403 0 2801 1 -1 Ypestis_CO92_2115110_2135454 Ypestis_Nepal516_2527641_2536846 2801 . G 6404 0 2801 1 -1 Ypestis_CO92_2115110_2135454 Ypestis_Nepal516_2527641_2536846 13910 C . 6429 1 4486 1 -1 Ypestis_CO92_2115110_2135454 Ypestis_Nepal516_2516490_2527403 13911 G . 6429 1 4486 1 -1 Ypestis_CO92_2115110_2135454 Ypestis_Nepal516_2516490_2527403 13912 C . 6429 1 4486 1 -1 Ypestis_CO92_2115110_2135454 Ypestis_Nepal516_2516490_2527403 13913 C . 6429 1 4486 1 -1 Ypestis_CO92_2115110_2135454 Ypestis_Nepal516_2516490_2527403 13914 A . 6429 1 4486 1 -1 Ypestis_CO92_2115110_2135454 Ypestis_Nepal516_2516490_2527403 13915 T . 6429 1 4486 1 -1 Ypestis_CO92_2115110_2135454 Ypestis_Nepal516_2516490_2527403 278 A . 278 1 278 1 1 Ypestis_CO92_2238218_2257234 Ypestis_Nepal516_1649546_1668519 279 T . 278 1 278 1 1 Ypestis_CO92_2238218_2257234 Ypestis_Nepal516_1649546_1668519 280 A . 278 1 278 1 1 Ypestis_CO92_2238218_2257234 Ypestis_Nepal516_1649546_1668519 281 G . 278 1 278 1 1 Ypestis_CO92_2238218_2257234 Ypestis_Nepal516_1649546_1668519 282 A . 278 1 278 1 1 Ypestis_CO92_2238218_2257234 Ypestis_Nepal516_1649546_1668519 283 A . 278 1 278 1 1 Ypestis_CO92_2238218_2257234 Ypestis_Nepal516_1649546_1668519 284 A . 278 1 278 1 1 Ypestis_CO92_2238218_2257234 Ypestis_Nepal516_1649546_1668519 285 G . 278 1 278 1 1 Ypestis_CO92_2238218_2257234 Ypestis_Nepal516_1649546_1668519 286 A . 278 1 278 1 1 Ypestis_CO92_2238218_2257234 Ypestis_Nepal516_1649546_1668519 287 T . 278 1 278 1 1 Ypestis_CO92_2238218_2257234 Ypestis_Nepal516_1649546_1668519 288 A . 278 1 278 1 1 Ypestis_CO92_2238218_2257234 Ypestis_Nepal516_1649546_1668519 289 G . 278 1 278 1 1 Ypestis_CO92_2238218_2257234 Ypestis_Nepal516_1649546_1668519 290 A . 278 1 278 1 1 Ypestis_CO92_2238218_2257234 Ypestis_Nepal516_1649546_1668519 291 A . 278 1 278 1 1 Ypestis_CO92_2238218_2257234 Ypestis_Nepal516_1649546_1668519 292 A . 278 1 278 1 1 Ypestis_CO92_2238218_2257234 Ypestis_Nepal516_1649546_1668519 293 G . 278 1 278 1 1 Ypestis_CO92_2238218_2257234 Ypestis_Nepal516_1649546_1668519 294 A . 278 1 278 1 1 Ypestis_CO92_2238218_2257234 Ypestis_Nepal516_1649546_1668519 295 T . 278 1 278 1 1 Ypestis_CO92_2238218_2257234 Ypestis_Nepal516_1649546_1668519 296 A . 278 1 278 1 1 Ypestis_CO92_2238218_2257234 Ypestis_Nepal516_1649546_1668519 297 G . 278 1 278 1 1 Ypestis_CO92_2238218_2257234 Ypestis_Nepal516_1649546_1668519 298 A . 278 1 278 1 1 Ypestis_CO92_2238218_2257234 Ypestis_Nepal516_1649546_1668519 299 A . 278 1 278 1 1 Ypestis_CO92_2238218_2257234 Ypestis_Nepal516_1649546_1668519 300 A . 278 1 278 1 1 Ypestis_CO92_2238218_2257234 Ypestis_Nepal516_1649546_1668519 301 G . 278 1 278 1 1 Ypestis_CO92_2238218_2257234 Ypestis_Nepal516_1649546_1668519 465 A . 441 1 441 1 1 Ypestis_CO92_2238218_2257234 Ypestis_Nepal516_1649546_1668519 466 T . 441 1 441 1 1 Ypestis_CO92_2238218_2257234 Ypestis_Nepal516_1649546_1668519 467 C . 441 1 441 1 1 Ypestis_CO92_2238218_2257234 Ypestis_Nepal516_1649546_1668519 468 A . 441 1 441 1 1 Ypestis_CO92_2238218_2257234 Ypestis_Nepal516_1649546_1668519 469 A . 441 1 441 1 1 Ypestis_CO92_2238218_2257234 Ypestis_Nepal516_1649546_1668519 470 G . 441 1 441 1 1 Ypestis_CO92_2238218_2257234 Ypestis_Nepal516_1649546_1668519 471 T . 441 1 441 1 1 Ypestis_CO92_2238218_2257234 Ypestis_Nepal516_1649546_1668519 472 A . 441 1 441 1 1 Ypestis_CO92_2238218_2257234 Ypestis_Nepal516_1649546_1668519 7656 G . 7624 1 7624 1 1 Ypestis_CO92_2238218_2257234 Ypestis_Nepal516_1649546_1668519 7657 T . 7624 1 7624 1 1 Ypestis_CO92_2238218_2257234 Ypestis_Nepal516_1649546_1668519 7658 G . 7624 1 7624 1 1 Ypestis_CO92_2238218_2257234 Ypestis_Nepal516_1649546_1668519 7659 T . 7624 1 7624 1 1 Ypestis_CO92_2238218_2257234 Ypestis_Nepal516_1649546_1668519 7660 A . 7624 1 7624 1 1 Ypestis_CO92_2238218_2257234 Ypestis_Nepal516_1649546_1668519 7661 G . 7624 1 7624 1 1 Ypestis_CO92_2238218_2257234 Ypestis_Nepal516_1649546_1668519 7662 G . 7624 1 7624 1 1 Ypestis_CO92_2238218_2257234 Ypestis_Nepal516_1649546_1668519 7663 T . 7624 1 7624 1 1 Ypestis_CO92_2238218_2257234 Ypestis_Nepal516_1649546_1668519 7664 G . 7624 1 7624 1 1 Ypestis_CO92_2238218_2257234 Ypestis_Nepal516_1649546_1668519 7665 T . 7624 1 7624 1 1 Ypestis_CO92_2238218_2257234 Ypestis_Nepal516_1649546_1668519 7666 A . 7624 1 7624 1 1 Ypestis_CO92_2238218_2257234 Ypestis_Nepal516_1649546_1668519 7667 G . 7624 1 7624 1 1 Ypestis_CO92_2238218_2257234 Ypestis_Nepal516_1649546_1668519 4024 T G 4023 4023 4023 1 1 Ypestis_CO92_2258554_2293502 Ypestis_Nepal516_1669840_1704787 15063 G C 15062 3967 15062 1 1 Ypestis_CO92_2258554_2293502 Ypestis_Nepal516_1669840_1704787 19030 G A 19029 734 15920 1 1 Ypestis_CO92_2258554_2293502 Ypestis_Nepal516_1669840_1704787 19764 A G 19763 734 15186 1 1 Ypestis_CO92_2258554_2293502 Ypestis_Nepal516_1669840_1704787 1645 T G 1645 1645 1645 1 1 Ypestis_CO92_2299015_2303881 Ypestis_Nepal516_1707631_1712497 8605 . A 8606 0 8605 1 1 Ypestis_CO92_2307425_2330570 Ypestis_Nepal516_1716041_1739182 8605 . C 8607 0 8605 1 1 Ypestis_CO92_2307425_2330570 Ypestis_Nepal516_1716041_1739182 8605 . T 8608 0 8605 1 1 Ypestis_CO92_2307425_2330570 Ypestis_Nepal516_1716041_1739182 8605 . A 8609 0 8605 1 1 Ypestis_CO92_2307425_2330570 Ypestis_Nepal516_1716041_1739182 8605 . A 8610 0 8605 1 1 Ypestis_CO92_2307425_2330570 Ypestis_Nepal516_1716041_1739182 8605 . T 8611 0 8605 1 1 Ypestis_CO92_2307425_2330570 Ypestis_Nepal516_1716041_1739182 8605 . C 8612 0 8605 1 1 Ypestis_CO92_2307425_2330570 Ypestis_Nepal516_1716041_1739182 8605 . A 8613 0 8605 1 1 Ypestis_CO92_2307425_2330570 Ypestis_Nepal516_1716041_1739182 13679 G T 13687 3102 9456 1 1 Ypestis_CO92_2307425_2330570 Ypestis_Nepal516_1716041_1739182 16781 C A 16789 1100 6354 1 1 Ypestis_CO92_2307425_2330570 Ypestis_Nepal516_1716041_1739182 17881 T . 17888 1 5255 1 1 Ypestis_CO92_2307425_2330570 Ypestis_Nepal516_1716041_1739182 17882 T . 17888 1 5255 1 1 Ypestis_CO92_2307425_2330570 Ypestis_Nepal516_1716041_1739182 17883 G . 17888 1 5255 1 1 Ypestis_CO92_2307425_2330570 Ypestis_Nepal516_1716041_1739182 17884 T . 17888 1 5255 1 1 Ypestis_CO92_2307425_2330570 Ypestis_Nepal516_1716041_1739182 17885 T . 17888 1 5255 1 1 Ypestis_CO92_2307425_2330570 Ypestis_Nepal516_1716041_1739182 17886 T . 17888 1 5255 1 1 Ypestis_CO92_2307425_2330570 Ypestis_Nepal516_1716041_1739182 17887 G . 17888 1 5255 1 1 Ypestis_CO92_2307425_2330570 Ypestis_Nepal516_1716041_1739182 17888 T . 17888 1 5255 1 1 Ypestis_CO92_2307425_2330570 Ypestis_Nepal516_1716041_1739182 17889 T . 17888 1 5255 1 1 Ypestis_CO92_2307425_2330570 Ypestis_Nepal516_1716041_1739182 17890 T . 17888 1 5255 1 1 Ypestis_CO92_2307425_2330570 Ypestis_Nepal516_1716041_1739182 17891 G . 17888 1 5255 1 1 Ypestis_CO92_2307425_2330570 Ypestis_Nepal516_1716041_1739182 17892 T . 17888 1 5255 1 1 Ypestis_CO92_2307425_2330570 Ypestis_Nepal516_1716041_1739182 2003 T A 2003 2003 2003 1 1 Ypestis_CO92_2354001_2364235 Ypestis_Nepal516_1762613_1772848 10463 . T 10464 10463 10463 1 1 Ypestis_CO92_2404569_2440322 Ypestis_Nepal516_1813182_1848936 5912 . T 5913 0 1907 1 1 Ypestis_CO92_2442377_2450194 Ypestis_Nepal516_1850991_1858818 5912 . G 5914 0 1907 1 1 Ypestis_CO92_2442377_2450194 Ypestis_Nepal516_1850991_1858818 5912 . C 5915 0 1907 1 1 Ypestis_CO92_2442377_2450194 Ypestis_Nepal516_1850991_1858818 5912 . A 5916 0 1907 1 1 Ypestis_CO92_2442377_2450194 Ypestis_Nepal516_1850991_1858818 5912 . G 5917 0 1907 1 1 Ypestis_CO92_2442377_2450194 Ypestis_Nepal516_1850991_1858818 5912 . C 5918 0 1907 1 1 Ypestis_CO92_2442377_2450194 Ypestis_Nepal516_1850991_1858818 5912 . A 5919 0 1907 1 1 Ypestis_CO92_2442377_2450194 Ypestis_Nepal516_1850991_1858818 5912 . C 5920 0 1907 1 1 Ypestis_CO92_2442377_2450194 Ypestis_Nepal516_1850991_1858818 5912 . G 5921 0 1907 1 1 Ypestis_CO92_2442377_2450194 Ypestis_Nepal516_1850991_1858818 1295 A G 1298 271 1295 1 1 Ypestis_CO92_2452160_2466307 Ypestis_Nepal516_1860780_1874930 1566 T G 1569 271 1566 1 1 Ypestis_CO92_2452160_2466307 Ypestis_Nepal516_1860780_1874930 441 . G 442 0 441 1 1 Ypestis_CO92_2466482_2470173 Ypestis_Nepal516_1875105_1878803 441 . C 443 0 441 1 1 Ypestis_CO92_2466482_2470173 Ypestis_Nepal516_1875105_1878803 441 . G 444 0 441 1 1 Ypestis_CO92_2466482_2470173 Ypestis_Nepal516_1875105_1878803 441 . G 445 0 441 1 1 Ypestis_CO92_2466482_2470173 Ypestis_Nepal516_1875105_1878803 441 . A 446 0 441 1 1 Ypestis_CO92_2466482_2470173 Ypestis_Nepal516_1875105_1878803 441 . T 447 0 441 1 1 Ypestis_CO92_2466482_2470173 Ypestis_Nepal516_1875105_1878803 441 . A 448 0 441 1 1 Ypestis_CO92_2466482_2470173 Ypestis_Nepal516_1875105_1878803 9245 G T 9245 5511 9245 1 1 Ypestis_CO92_2471492_2588358 Ypestis_Nepal516_1880122_1950814 14756 . T 14757 0 14756 1 1 Ypestis_CO92_2471492_2588358 Ypestis_Nepal516_1880122_1950814 14756 . A 14758 0 14756 1 1 Ypestis_CO92_2471492_2588358 Ypestis_Nepal516_1880122_1950814 14756 . T 14759 0 14756 1 1 Ypestis_CO92_2471492_2588358 Ypestis_Nepal516_1880122_1950814 14756 . C 14760 0 14756 1 1 Ypestis_CO92_2471492_2588358 Ypestis_Nepal516_1880122_1950814 14756 . G 14761 0 14756 1 1 Ypestis_CO92_2471492_2588358 Ypestis_Nepal516_1880122_1950814 14756 . G 14762 0 14756 1 1 Ypestis_CO92_2471492_2588358 Ypestis_Nepal516_1880122_1950814 14756 . T 14763 0 14756 1 1 Ypestis_CO92_2471492_2588358 Ypestis_Nepal516_1880122_1950814 14756 . T 14764 0 14756 1 1 Ypestis_CO92_2471492_2588358 Ypestis_Nepal516_1880122_1950814 14756 . T 14765 0 14756 1 1 Ypestis_CO92_2471492_2588358 Ypestis_Nepal516_1880122_1950814 14756 . G 14766 0 14756 1 1 Ypestis_CO92_2471492_2588358 Ypestis_Nepal516_1880122_1950814 14756 . T 14767 0 14756 1 1 Ypestis_CO92_2471492_2588358 Ypestis_Nepal516_1880122_1950814 14756 . T 14768 0 14756 1 1 Ypestis_CO92_2471492_2588358 Ypestis_Nepal516_1880122_1950814 14756 . A 14769 0 14756 1 1 Ypestis_CO92_2471492_2588358 Ypestis_Nepal516_1880122_1950814 14756 . A 14770 0 14756 1 1 Ypestis_CO92_2471492_2588358 Ypestis_Nepal516_1880122_1950814 14756 . A 14771 0 14756 1 1 Ypestis_CO92_2471492_2588358 Ypestis_Nepal516_1880122_1950814 14756 . T 14772 0 14756 1 1 Ypestis_CO92_2471492_2588358 Ypestis_Nepal516_1880122_1950814 14756 . C 14773 0 14756 1 1 Ypestis_CO92_2471492_2588358 Ypestis_Nepal516_1880122_1950814 22404 C T 22421 7648 22404 1 1 Ypestis_CO92_2471492_2588358 Ypestis_Nepal516_1880122_1950814 36898 T C 36915 4735 33779 1 1 Ypestis_CO92_2471492_2588358 Ypestis_Nepal516_1880122_1950814 41633 . G 41651 0 29043 1 1 Ypestis_CO92_2471492_2588358 Ypestis_Nepal516_1880122_1950814 41633 . C 41652 0 29042 1 1 Ypestis_CO92_2471492_2588358 Ypestis_Nepal516_1880122_1950814 41633 . C 41653 0 29041 1 1 Ypestis_CO92_2471492_2588358 Ypestis_Nepal516_1880122_1950814 41633 . A 41654 0 29040 1 1 Ypestis_CO92_2471492_2588358 Ypestis_Nepal516_1880122_1950814 41633 . G 41655 0 29039 1 1 Ypestis_CO92_2471492_2588358 Ypestis_Nepal516_1880122_1950814 41633 . G 41656 0 29038 1 1 Ypestis_CO92_2471492_2588358 Ypestis_Nepal516_1880122_1950814 41633 . C 41657 0 29037 1 1 Ypestis_CO92_2471492_2588358 Ypestis_Nepal516_1880122_1950814 41633 . A 41658 0 29036 1 1 Ypestis_CO92_2471492_2588358 Ypestis_Nepal516_1880122_1950814 41633 . G 41659 0 29035 1 1 Ypestis_CO92_2471492_2588358 Ypestis_Nepal516_1880122_1950814 41633 . T 41660 0 29034 1 1 Ypestis_CO92_2471492_2588358 Ypestis_Nepal516_1880122_1950814 41633 . G 41661 0 29033 1 1 Ypestis_CO92_2471492_2588358 Ypestis_Nepal516_1880122_1950814 41633 . C 41662 0 29032 1 1 Ypestis_CO92_2471492_2588358 Ypestis_Nepal516_1880122_1950814 41633 . C 41663 0 29031 1 1 Ypestis_CO92_2471492_2588358 Ypestis_Nepal516_1880122_1950814 41633 . A 41664 0 29030 1 1 Ypestis_CO92_2471492_2588358 Ypestis_Nepal516_1880122_1950814 41633 . G 41665 0 29029 1 1 Ypestis_CO92_2471492_2588358 Ypestis_Nepal516_1880122_1950814 41633 . G 41666 0 29028 1 1 Ypestis_CO92_2471492_2588358 Ypestis_Nepal516_1880122_1950814 41633 . C 41667 0 29027 1 1 Ypestis_CO92_2471492_2588358 Ypestis_Nepal516_1880122_1950814 41633 . A 41668 0 29026 1 1 Ypestis_CO92_2471492_2588358 Ypestis_Nepal516_1880122_1950814 41633 . G 41669 0 29025 1 1 Ypestis_CO92_2471492_2588358 Ypestis_Nepal516_1880122_1950814 41633 . T 41670 0 29024 1 1 Ypestis_CO92_2471492_2588358 Ypestis_Nepal516_1880122_1950814 59797 C A 59951 7184 10743 1 1 Ypestis_CO92_2471492_2588358 Ypestis_Nepal516_1880122_1950814 66981 A . 67134 1 3560 1 1 Ypestis_CO92_2471492_2588358 Ypestis_Nepal516_1880122_1950814 66982 T . 67134 1 3560 1 1 Ypestis_CO92_2471492_2588358 Ypestis_Nepal516_1880122_1950814 77060 G T 6518 958 6518 1 1 Ypestis_CO92_2471492_2588358 Ypestis_Nepal516_1952139_1990139 78018 A . 7475 1 7475 1 1 Ypestis_CO92_2471492_2588358 Ypestis_Nepal516_1952139_1990139 78019 G . 7475 1 7475 1 1 Ypestis_CO92_2471492_2588358 Ypestis_Nepal516_1952139_1990139 78020 G . 7475 1 7475 1 1 Ypestis_CO92_2471492_2588358 Ypestis_Nepal516_1952139_1990139 78021 C . 7475 1 7475 1 1 Ypestis_CO92_2471492_2588358 Ypestis_Nepal516_1952139_1990139 78022 A . 7475 1 7475 1 1 Ypestis_CO92_2471492_2588358 Ypestis_Nepal516_1952139_1990139 78023 C . 7475 1 7475 1 1 Ypestis_CO92_2471492_2588358 Ypestis_Nepal516_1952139_1990139 78024 G . 7475 1 7475 1 1 Ypestis_CO92_2471492_2588358 Ypestis_Nepal516_1952139_1990139 78025 A . 7475 1 7475 1 1 Ypestis_CO92_2471492_2588358 Ypestis_Nepal516_1952139_1990139 81092 T . 10230 1 10230 1 1 Ypestis_CO92_2471492_2588358 Ypestis_Nepal516_1952139_1990139 81093 T . 10230 1 10230 1 1 Ypestis_CO92_2471492_2588358 Ypestis_Nepal516_1952139_1990139 81094 T . 10230 1 10230 1 1 Ypestis_CO92_2471492_2588358 Ypestis_Nepal516_1952139_1990139 81095 C . 10230 1 10230 1 1 Ypestis_CO92_2471492_2588358 Ypestis_Nepal516_1952139_1990139 81096 A . 10230 1 10230 1 1 Ypestis_CO92_2471492_2588358 Ypestis_Nepal516_1952139_1990139 81097 A . 10230 1 10230 1 1 Ypestis_CO92_2471492_2588358 Ypestis_Nepal516_1952139_1990139 81098 G . 10230 1 10230 1 1 Ypestis_CO92_2471492_2588358 Ypestis_Nepal516_1952139_1990139 81099 C . 10230 1 10230 1 1 Ypestis_CO92_2471492_2588358 Ypestis_Nepal516_1952139_1990139 81100 T . 10230 1 10230 1 1 Ypestis_CO92_2471492_2588358 Ypestis_Nepal516_1952139_1990139 81101 G . 10230 1 10230 1 1 Ypestis_CO92_2471492_2588358 Ypestis_Nepal516_1952139_1990139 81102 A . 10230 1 10230 1 1 Ypestis_CO92_2471492_2588358 Ypestis_Nepal516_1952139_1990139 81103 A . 10230 1 10230 1 1 Ypestis_CO92_2471492_2588358 Ypestis_Nepal516_1952139_1990139 81104 T . 10230 1 10230 1 1 Ypestis_CO92_2471492_2588358 Ypestis_Nepal516_1952139_1990139 81105 G . 10230 1 10230 1 1 Ypestis_CO92_2471492_2588358 Ypestis_Nepal516_1952139_1990139 81106 T . 10230 1 10230 1 1 Ypestis_CO92_2471492_2588358 Ypestis_Nepal516_1952139_1990139 81107 G . 10230 1 10230 1 1 Ypestis_CO92_2471492_2588358 Ypestis_Nepal516_1952139_1990139 81108 T . 10230 1 10230 1 1 Ypestis_CO92_2471492_2588358 Ypestis_Nepal516_1952139_1990139 81109 G . 10230 1 10230 1 1 Ypestis_CO92_2471492_2588358 Ypestis_Nepal516_1952139_1990139 103661 G A 24852 417 13150 1 1 Ypestis_CO92_2471492_2588358 Ypestis_Nepal516_1952139_1990139 106195 A G 27321 327 10673 1 1 Ypestis_CO92_2471492_2588358 Ypestis_Nepal516_1952139_1990139 106522 A G 27648 25 10346 1 1 Ypestis_CO92_2471492_2588358 Ypestis_Nepal516_1952139_1990139 106547 . C 27674 0 10321 1 1 Ypestis_CO92_2471492_2588358 Ypestis_Nepal516_1952139_1990139 106547 . T 27675 0 10321 1 1 Ypestis_CO92_2471492_2588358 Ypestis_Nepal516_1952139_1990139 106547 . A 27676 0 10321 1 1 Ypestis_CO92_2471492_2588358 Ypestis_Nepal516_1952139_1990139 106547 . T 27677 0 10321 1 1 Ypestis_CO92_2471492_2588358 Ypestis_Nepal516_1952139_1990139 106547 . C 27678 0 10321 1 1 Ypestis_CO92_2471492_2588358 Ypestis_Nepal516_1952139_1990139 106547 . A 27679 0 10321 1 1 Ypestis_CO92_2471492_2588358 Ypestis_Nepal516_1952139_1990139 106547 . C 27680 0 10321 1 1 Ypestis_CO92_2471492_2588358 Ypestis_Nepal516_1952139_1990139 111167 . C 32301 4620 5701 1 1 Ypestis_CO92_2471492_2588358 Ypestis_Nepal516_1952139_1990139 116756 C T 37890 112 112 1 1 Ypestis_CO92_2471492_2588358 Ypestis_Nepal516_1952139_1990139 14882 C A 11014 3909 11014 1 -1 Ypestis_CO92_247683_273577 Ypestis_Nepal516_3871338_3897236 18791 . G 7104 3909 7104 1 -1 Ypestis_CO92_247683_273577 Ypestis_Nepal516_3871338_3897236 1893 . C 5491 0 1893 1 1 Ypestis_CO92_2604424_2637090 Ypestis_Nepal516_2002929_2039240 1893 . A 5492 0 1893 1 1 Ypestis_CO92_2604424_2637090 Ypestis_Nepal516_2002929_2039240 1893 . G 5493 0 1893 1 1 Ypestis_CO92_2604424_2637090 Ypestis_Nepal516_2002929_2039240 1893 . C 5494 0 1893 1 1 Ypestis_CO92_2604424_2637090 Ypestis_Nepal516_2002929_2039240 1893 . A 5495 0 1893 1 1 Ypestis_CO92_2604424_2637090 Ypestis_Nepal516_2002929_2039240 1893 . C 5496 0 1893 1 1 Ypestis_CO92_2604424_2637090 Ypestis_Nepal516_2002929_2039240 1893 . C 5497 0 1893 1 1 Ypestis_CO92_2604424_2637090 Ypestis_Nepal516_2002929_2039240 1893 . A 5498 0 1893 1 1 Ypestis_CO92_2604424_2637090 Ypestis_Nepal516_2002929_2039240 1893 . G 5499 0 1893 1 1 Ypestis_CO92_2604424_2637090 Ypestis_Nepal516_2002929_2039240 1893 . C 5500 0 1893 1 1 Ypestis_CO92_2604424_2637090 Ypestis_Nepal516_2002929_2039240 1893 . A 5501 0 1893 1 1 Ypestis_CO92_2604424_2637090 Ypestis_Nepal516_2002929_2039240 1893 . C 5502 0 1893 1 1 Ypestis_CO92_2604424_2637090 Ypestis_Nepal516_2002929_2039240 1893 . C 5503 0 1893 1 1 Ypestis_CO92_2604424_2637090 Ypestis_Nepal516_2002929_2039240 1893 . A 5504 0 1893 1 1 Ypestis_CO92_2604424_2637090 Ypestis_Nepal516_2002929_2039240 1893 . G 5505 0 1893 1 1 Ypestis_CO92_2604424_2637090 Ypestis_Nepal516_2002929_2039240 1893 . C 5506 0 1893 1 1 Ypestis_CO92_2604424_2637090 Ypestis_Nepal516_2002929_2039240 1893 . A 5507 0 1893 1 1 Ypestis_CO92_2604424_2637090 Ypestis_Nepal516_2002929_2039240 1893 . C 5508 0 1893 1 1 Ypestis_CO92_2604424_2637090 Ypestis_Nepal516_2002929_2039240 1893 . C 5509 0 1893 1 1 Ypestis_CO92_2604424_2637090 Ypestis_Nepal516_2002929_2039240 1893 . A 5510 0 1893 1 1 Ypestis_CO92_2604424_2637090 Ypestis_Nepal516_2002929_2039240 1893 . G 5511 0 1893 1 1 Ypestis_CO92_2604424_2637090 Ypestis_Nepal516_2002929_2039240 1893 . C 5512 0 1893 1 1 Ypestis_CO92_2604424_2637090 Ypestis_Nepal516_2002929_2039240 1893 . A 5513 0 1893 1 1 Ypestis_CO92_2604424_2637090 Ypestis_Nepal516_2002929_2039240 1893 . C 5514 0 1893 1 1 Ypestis_CO92_2604424_2637090 Ypestis_Nepal516_2002929_2039240 1893 . C 5515 0 1893 1 1 Ypestis_CO92_2604424_2637090 Ypestis_Nepal516_2002929_2039240 1893 . A 5516 0 1893 1 1 Ypestis_CO92_2604424_2637090 Ypestis_Nepal516_2002929_2039240 1893 . G 5517 0 1893 1 1 Ypestis_CO92_2604424_2637090 Ypestis_Nepal516_2002929_2039240 1893 . C 5518 0 1893 1 1 Ypestis_CO92_2604424_2637090 Ypestis_Nepal516_2002929_2039240 1893 . A 5519 0 1893 1 1 Ypestis_CO92_2604424_2637090 Ypestis_Nepal516_2002929_2039240 1893 . C 5520 0 1893 1 1 Ypestis_CO92_2604424_2637090 Ypestis_Nepal516_2002929_2039240 12025 . G 15653 0 12025 1 1 Ypestis_CO92_2604424_2637090 Ypestis_Nepal516_2002929_2039240 12025 . T 15654 0 12025 1 1 Ypestis_CO92_2604424_2637090 Ypestis_Nepal516_2002929_2039240 12025 . G 15655 0 12025 1 1 Ypestis_CO92_2604424_2637090 Ypestis_Nepal516_2002929_2039240 12025 . C 15656 0 12025 1 1 Ypestis_CO92_2604424_2637090 Ypestis_Nepal516_2002929_2039240 12025 . A 15657 0 12025 1 1 Ypestis_CO92_2604424_2637090 Ypestis_Nepal516_2002929_2039240 12025 . G 15658 0 12025 1 1 Ypestis_CO92_2604424_2637090 Ypestis_Nepal516_2002929_2039240 12025 . T 15659 0 12025 1 1 Ypestis_CO92_2604424_2637090 Ypestis_Nepal516_2002929_2039240 12025 . A 15660 0 12025 1 1 Ypestis_CO92_2604424_2637090 Ypestis_Nepal516_2002929_2039240 12025 . A 15661 0 12025 1 1 Ypestis_CO92_2604424_2637090 Ypestis_Nepal516_2002929_2039240 12025 . T 15662 0 12025 1 1 Ypestis_CO92_2604424_2637090 Ypestis_Nepal516_2002929_2039240 12025 . G 15663 0 12025 1 1 Ypestis_CO92_2604424_2637090 Ypestis_Nepal516_2002929_2039240 12025 . A 15664 0 12025 1 1 Ypestis_CO92_2604424_2637090 Ypestis_Nepal516_2002929_2039240 12025 . A 15665 0 12025 1 1 Ypestis_CO92_2604424_2637090 Ypestis_Nepal516_2002929_2039240 12025 . C 15666 0 12025 1 1 Ypestis_CO92_2604424_2637090 Ypestis_Nepal516_2002929_2039240 12025 . T 15667 0 12025 1 1 Ypestis_CO92_2604424_2637090 Ypestis_Nepal516_2002929_2039240 12025 . A 15668 0 12025 1 1 Ypestis_CO92_2604424_2637090 Ypestis_Nepal516_2002929_2039240 12025 . C 15669 0 12025 1 1 Ypestis_CO92_2604424_2637090 Ypestis_Nepal516_2002929_2039240 12025 . A 15670 0 12025 1 1 Ypestis_CO92_2604424_2637090 Ypestis_Nepal516_2002929_2039240 15188 T G 18833 3163 15188 1 1 Ypestis_CO92_2604424_2637090 Ypestis_Nepal516_2002929_2039240 1730 . T 1731 1730 1730 1 1 Ypestis_CO92_2637821_2646238 Ypestis_Nepal516_2039971_2048389 324 C . 323 1 323 1 1 Ypestis_CO92_2646967_2658022 Ypestis_Nepal516_2049118_2076093 325 A . 323 1 323 1 1 Ypestis_CO92_2646967_2658022 Ypestis_Nepal516_2049118_2076093 326 C . 323 1 323 1 1 Ypestis_CO92_2646967_2658022 Ypestis_Nepal516_2049118_2076093 327 A . 323 1 323 1 1 Ypestis_CO92_2646967_2658022 Ypestis_Nepal516_2049118_2076093 328 C . 323 1 323 1 1 Ypestis_CO92_2646967_2658022 Ypestis_Nepal516_2049118_2076093 329 A . 323 1 323 1 1 Ypestis_CO92_2646967_2658022 Ypestis_Nepal516_2049118_2076093 330 T . 323 1 323 1 1 Ypestis_CO92_2646967_2658022 Ypestis_Nepal516_2049118_2076093 6978 A G 6978 3984 3984 1 1 Ypestis_CO92_2677816_2688776 Ypestis_Nepal516_2076269_2087229 44513 C A 44891 5784 6372 1 1 Ypestis_CO92_2694637_2745525 Ypestis_Nepal516_2092713_2143974 50297 A G 50675 588 588 1 1 Ypestis_CO92_2694637_2745525 Ypestis_Nepal516_2092713_2143974 9012 G A 28257 3766 9012 1 -1 Ypestis_CO92_273751_300392 Ypestis_Nepal516_3833896_3871164 12778 T A 24491 3766 12778 1 -1 Ypestis_CO92_273751_300392 Ypestis_Nepal516_3833896_3871164 17701 . A 17702 454 17701 1 1 Ypestis_CO92_2746842_2784906 Ypestis_Nepal516_2309103_2346759 18155 T G 18156 454 18155 1 1 Ypestis_CO92_2746842_2784906 Ypestis_Nepal516_2309103_2346759 24642 . G 24223 0 13424 1 1 Ypestis_CO92_2746842_2784906 Ypestis_Nepal516_2309103_2346759 24642 . G 24224 0 13424 1 1 Ypestis_CO92_2746842_2784906 Ypestis_Nepal516_2309103_2346759 24642 . A 24225 0 13424 1 1 Ypestis_CO92_2746842_2784906 Ypestis_Nepal516_2309103_2346759 24642 . T 24226 0 13424 1 1 Ypestis_CO92_2746842_2784906 Ypestis_Nepal516_2309103_2346759 24642 . G 24227 0 13424 1 1 Ypestis_CO92_2746842_2784906 Ypestis_Nepal516_2309103_2346759 24642 . A 24228 0 13424 1 1 Ypestis_CO92_2746842_2784906 Ypestis_Nepal516_2309103_2346759 24642 . G 24229 0 13424 1 1 Ypestis_CO92_2746842_2784906 Ypestis_Nepal516_2309103_2346759 24642 . G 24230 0 13424 1 1 Ypestis_CO92_2746842_2784906 Ypestis_Nepal516_2309103_2346759 24642 . A 24231 0 13424 1 1 Ypestis_CO92_2746842_2784906 Ypestis_Nepal516_2309103_2346759 24642 . T 24232 0 13424 1 1 Ypestis_CO92_2746842_2784906 Ypestis_Nepal516_2309103_2346759 24642 . G 24233 0 13424 1 1 Ypestis_CO92_2746842_2784906 Ypestis_Nepal516_2309103_2346759 24642 . A 24234 0 13424 1 1 Ypestis_CO92_2746842_2784906 Ypestis_Nepal516_2309103_2346759 7591 T C 7591 267 4845 1 1 Ypestis_CO92_2792062_2804565 Ypestis_Nepal516_2353915_2366349 7858 . A 7859 179 4577 1 1 Ypestis_CO92_2792062_2804565 Ypestis_Nepal516_2353915_2366349 8037 C A 8038 179 4398 1 1 Ypestis_CO92_2792062_2804565 Ypestis_Nepal516_2353915_2366349 4583 G A 4583 4583 4583 1 1 Ypestis_CO92_2830827_2846304 Ypestis_Nepal516_2392611_2408088 1214 C T 1214 1214 1214 1 1 Ypestis_CO92_2846479_2851214 Ypestis_Nepal516_2408263_2412998 1958 . A 1959 0 1958 1 1 Ypestis_CO92_2851392_2883269 Ypestis_Nepal516_2413176_2445083 1958 . C 1960 0 1958 1 1 Ypestis_CO92_2851392_2883269 Ypestis_Nepal516_2413176_2445083 1958 . A 1961 0 1958 1 1 Ypestis_CO92_2851392_2883269 Ypestis_Nepal516_2413176_2445083 1958 . G 1962 0 1958 1 1 Ypestis_CO92_2851392_2883269 Ypestis_Nepal516_2413176_2445083 1958 . A 1963 0 1958 1 1 Ypestis_CO92_2851392_2883269 Ypestis_Nepal516_2413176_2445083 1958 . T 1964 0 1958 1 1 Ypestis_CO92_2851392_2883269 Ypestis_Nepal516_2413176_2445083 1958 . G 1965 0 1958 1 1 Ypestis_CO92_2851392_2883269 Ypestis_Nepal516_2413176_2445083 1958 . A 1966 0 1958 1 1 Ypestis_CO92_2851392_2883269 Ypestis_Nepal516_2413176_2445083 1958 . C 1967 0 1958 1 1 Ypestis_CO92_2851392_2883269 Ypestis_Nepal516_2413176_2445083 1958 . A 1968 0 1958 1 1 Ypestis_CO92_2851392_2883269 Ypestis_Nepal516_2413176_2445083 1958 . G 1969 0 1958 1 1 Ypestis_CO92_2851392_2883269 Ypestis_Nepal516_2413176_2445083 1958 . A 1970 0 1958 1 1 Ypestis_CO92_2851392_2883269 Ypestis_Nepal516_2413176_2445083 1958 . T 1971 0 1958 1 1 Ypestis_CO92_2851392_2883269 Ypestis_Nepal516_2413176_2445083 1958 . G 1972 0 1958 1 1 Ypestis_CO92_2851392_2883269 Ypestis_Nepal516_2413176_2445083 1958 . A 1973 0 1958 1 1 Ypestis_CO92_2851392_2883269 Ypestis_Nepal516_2413176_2445083 1958 . C 1974 0 1958 1 1 Ypestis_CO92_2851392_2883269 Ypestis_Nepal516_2413176_2445083 1958 . A 1975 0 1958 1 1 Ypestis_CO92_2851392_2883269 Ypestis_Nepal516_2413176_2445083 1958 . G 1976 0 1958 1 1 Ypestis_CO92_2851392_2883269 Ypestis_Nepal516_2413176_2445083 1958 . A 1977 0 1958 1 1 Ypestis_CO92_2851392_2883269 Ypestis_Nepal516_2413176_2445083 1958 . T 1978 0 1958 1 1 Ypestis_CO92_2851392_2883269 Ypestis_Nepal516_2413176_2445083 1958 . G 1979 0 1958 1 1 Ypestis_CO92_2851392_2883269 Ypestis_Nepal516_2413176_2445083 1958 . A 1980 0 1958 1 1 Ypestis_CO92_2851392_2883269 Ypestis_Nepal516_2413176_2445083 1958 . T 1981 0 1958 1 1 Ypestis_CO92_2851392_2883269 Ypestis_Nepal516_2413176_2445083 1958 . G 1982 0 1958 1 1 Ypestis_CO92_2851392_2883269 Ypestis_Nepal516_2413176_2445083 1958 . A 1983 0 1958 1 1 Ypestis_CO92_2851392_2883269 Ypestis_Nepal516_2413176_2445083 1958 . T 1984 0 1958 1 1 Ypestis_CO92_2851392_2883269 Ypestis_Nepal516_2413176_2445083 1958 . T 1985 0 1958 1 1 Ypestis_CO92_2851392_2883269 Ypestis_Nepal516_2413176_2445083 1958 . G 1986 0 1958 1 1 Ypestis_CO92_2851392_2883269 Ypestis_Nepal516_2413176_2445083 1958 . T 1987 0 1958 1 1 Ypestis_CO92_2851392_2883269 Ypestis_Nepal516_2413176_2445083 1958 . T 1988 0 1958 1 1 Ypestis_CO92_2851392_2883269 Ypestis_Nepal516_2413176_2445083 31063 T C 31093 816 816 1 1 Ypestis_CO92_2851392_2883269 Ypestis_Nepal516_2413176_2445083 7612 T C 6716 609 6716 1 1 Ypestis_CO92_2887092_2946104 Ypestis_Nepal516_1214069_1272147 9549 . C 8593 0 8593 1 1 Ypestis_CO92_2887092_2946104 Ypestis_Nepal516_1214069_1272147 9549 . T 8594 0 8594 1 1 Ypestis_CO92_2887092_2946104 Ypestis_Nepal516_1214069_1272147 9549 . A 8595 0 8595 1 1 Ypestis_CO92_2887092_2946104 Ypestis_Nepal516_1214069_1272147 9549 . A 8596 0 8596 1 1 Ypestis_CO92_2887092_2946104 Ypestis_Nepal516_1214069_1272147 9549 . T 8597 0 8597 1 1 Ypestis_CO92_2887092_2946104 Ypestis_Nepal516_1214069_1272147 9549 . A 8598 0 8598 1 1 Ypestis_CO92_2887092_2946104 Ypestis_Nepal516_1214069_1272147 9549 . C 8599 0 8599 1 1 Ypestis_CO92_2887092_2946104 Ypestis_Nepal516_1214069_1272147 9549 . C 8600 0 8600 1 1 Ypestis_CO92_2887092_2946104 Ypestis_Nepal516_1214069_1272147 9549 . T 8601 0 8601 1 1 Ypestis_CO92_2887092_2946104 Ypestis_Nepal516_1214069_1272147 9549 . C 8602 0 8602 1 1 Ypestis_CO92_2887092_2946104 Ypestis_Nepal516_1214069_1272147 9549 . A 8603 0 8603 1 1 Ypestis_CO92_2887092_2946104 Ypestis_Nepal516_1214069_1272147 9549 . A 8604 0 8604 1 1 Ypestis_CO92_2887092_2946104 Ypestis_Nepal516_1214069_1272147 9549 . T 8605 0 8605 1 1 Ypestis_CO92_2887092_2946104 Ypestis_Nepal516_1214069_1272147 9549 . C 8606 0 8606 1 1 Ypestis_CO92_2887092_2946104 Ypestis_Nepal516_1214069_1272147 9549 . A 8607 0 8607 1 1 Ypestis_CO92_2887092_2946104 Ypestis_Nepal516_1214069_1272147 9549 . T 8608 0 8608 1 1 Ypestis_CO92_2887092_2946104 Ypestis_Nepal516_1214069_1272147 9549 . C 8609 0 8609 1 1 Ypestis_CO92_2887092_2946104 Ypestis_Nepal516_1214069_1272147 9549 . T 8610 0 8610 1 1 Ypestis_CO92_2887092_2946104 Ypestis_Nepal516_1214069_1272147 9549 . A 8611 0 8611 1 1 Ypestis_CO92_2887092_2946104 Ypestis_Nepal516_1214069_1272147 9549 . A 8612 0 8612 1 1 Ypestis_CO92_2887092_2946104 Ypestis_Nepal516_1214069_1272147 9549 . T 8613 0 8613 1 1 Ypestis_CO92_2887092_2946104 Ypestis_Nepal516_1214069_1272147 9549 . A 8614 0 8614 1 1 Ypestis_CO92_2887092_2946104 Ypestis_Nepal516_1214069_1272147 9549 . C 8615 0 8615 1 1 Ypestis_CO92_2887092_2946104 Ypestis_Nepal516_1214069_1272147 9549 . C 8616 0 8616 1 1 Ypestis_CO92_2887092_2946104 Ypestis_Nepal516_1214069_1272147 9549 . T 8617 0 8617 1 1 Ypestis_CO92_2887092_2946104 Ypestis_Nepal516_1214069_1272147 9549 . C 8618 0 8618 1 1 Ypestis_CO92_2887092_2946104 Ypestis_Nepal516_1214069_1272147 9549 . A 8619 0 8619 1 1 Ypestis_CO92_2887092_2946104 Ypestis_Nepal516_1214069_1272147 9549 . G 8620 0 8620 1 1 Ypestis_CO92_2887092_2946104 Ypestis_Nepal516_1214069_1272147 9549 . T 8621 0 8621 1 1 Ypestis_CO92_2887092_2946104 Ypestis_Nepal516_1214069_1272147 9549 . C 8622 0 8622 1 1 Ypestis_CO92_2887092_2946104 Ypestis_Nepal516_1214069_1272147 9549 . A 8623 0 8623 1 1 Ypestis_CO92_2887092_2946104 Ypestis_Nepal516_1214069_1272147 9549 . T 8624 0 8624 1 1 Ypestis_CO92_2887092_2946104 Ypestis_Nepal516_1214069_1272147 16791 T G 15866 7242 15866 1 1 Ypestis_CO92_2887092_2946104 Ypestis_Nepal516_1214069_1272147 29127 C . 28201 1 28201 1 1 Ypestis_CO92_2887092_2946104 Ypestis_Nepal516_1214069_1272147 29128 G . 28201 1 28201 1 1 Ypestis_CO92_2887092_2946104 Ypestis_Nepal516_1214069_1272147 29129 A . 28201 1 28201 1 1 Ypestis_CO92_2887092_2946104 Ypestis_Nepal516_1214069_1272147 29130 C . 28201 1 28201 1 1 Ypestis_CO92_2887092_2946104 Ypestis_Nepal516_1214069_1272147 29131 T . 28201 1 28201 1 1 Ypestis_CO92_2887092_2946104 Ypestis_Nepal516_1214069_1272147 29132 A . 28201 1 28201 1 1 Ypestis_CO92_2887092_2946104 Ypestis_Nepal516_1214069_1272147 29133 T . 28201 1 28201 1 1 Ypestis_CO92_2887092_2946104 Ypestis_Nepal516_1214069_1272147 29134 C . 28201 1 28201 1 1 Ypestis_CO92_2887092_2946104 Ypestis_Nepal516_1214069_1272147 29135 A . 28201 1 28201 1 1 Ypestis_CO92_2887092_2946104 Ypestis_Nepal516_1214069_1272147 29136 C . 28201 1 28201 1 1 Ypestis_CO92_2887092_2946104 Ypestis_Nepal516_1214069_1272147 29658 . A 28724 522 28724 1 1 Ypestis_CO92_2887092_2946104 Ypestis_Nepal516_1214069_1272147 47773 C T 46839 108 11241 1 1 Ypestis_CO92_2887092_2946104 Ypestis_Nepal516_1214069_1272147 47881 C G 46947 108 11133 1 1 Ypestis_CO92_2887092_2946104 Ypestis_Nepal516_1214069_1272147 49177 G A 48243 1296 9837 1 1 Ypestis_CO92_2887092_2946104 Ypestis_Nepal516_1214069_1272147 4459 G A 4459 3618 4459 1 1 Ypestis_CO92_2946496_2955545 Ypestis_Nepal516_1272709_1281758 8077 C T 8077 974 974 1 1 Ypestis_CO92_2946496_2955545 Ypestis_Nepal516_1272709_1281758 2054 C T 2054 2054 2054 1 1 Ypestis_CO92_2956274_2968861 Ypestis_Nepal516_1282487_1295075 12152 A G 12152 437 437 1 1 Ypestis_CO92_2956274_2968861 Ypestis_Nepal516_1282487_1295075 5171 . T 5172 0 5171 1 1 Ypestis_CO92_2971759_2982276 Ypestis_Nepal516_1297973_1362164 5171 . A 5173 0 5171 1 1 Ypestis_CO92_2971759_2982276 Ypestis_Nepal516_1297973_1362164 5171 . C 5174 0 5171 1 1 Ypestis_CO92_2971759_2982276 Ypestis_Nepal516_1297973_1362164 5171 . C 5175 0 5171 1 1 Ypestis_CO92_2971759_2982276 Ypestis_Nepal516_1297973_1362164 5171 . G 5176 0 5171 1 1 Ypestis_CO92_2971759_2982276 Ypestis_Nepal516_1297973_1362164 5171 . T 5177 0 5171 1 1 Ypestis_CO92_2971759_2982276 Ypestis_Nepal516_1297973_1362164 5171 . A 5178 0 5171 1 1 Ypestis_CO92_2971759_2982276 Ypestis_Nepal516_1297973_1362164 5171 . A 5179 0 5171 1 1 Ypestis_CO92_2971759_2982276 Ypestis_Nepal516_1297973_1362164 5171 . A 5180 0 5171 1 1 Ypestis_CO92_2971759_2982276 Ypestis_Nepal516_1297973_1362164 5171 . C 5181 0 5171 1 1 Ypestis_CO92_2971759_2982276 Ypestis_Nepal516_1297973_1362164 5171 . A 5182 0 5171 1 1 Ypestis_CO92_2971759_2982276 Ypestis_Nepal516_1297973_1362164 5171 . G 5183 0 5171 1 1 Ypestis_CO92_2971759_2982276 Ypestis_Nepal516_1297973_1362164 5171 . A 5184 0 5171 1 1 Ypestis_CO92_2971759_2982276 Ypestis_Nepal516_1297973_1362164 5171 . A 5185 0 5171 1 1 Ypestis_CO92_2971759_2982276 Ypestis_Nepal516_1297973_1362164 5171 . A 5186 0 5171 1 1 Ypestis_CO92_2971759_2982276 Ypestis_Nepal516_1297973_1362164 5171 . A 5187 0 5171 1 1 Ypestis_CO92_2971759_2982276 Ypestis_Nepal516_1297973_1362164 5171 . G 5188 0 5171 1 1 Ypestis_CO92_2971759_2982276 Ypestis_Nepal516_1297973_1362164 5171 . T 5189 0 5171 1 1 Ypestis_CO92_2971759_2982276 Ypestis_Nepal516_1297973_1362164 8323 C . 8340 1 2196 1 1 Ypestis_CO92_2971759_2982276 Ypestis_Nepal516_1297973_1362164 8324 T . 8340 1 2195 1 1 Ypestis_CO92_2971759_2982276 Ypestis_Nepal516_1297973_1362164 8325 A . 8340 1 2194 1 1 Ypestis_CO92_2971759_2982276 Ypestis_Nepal516_1297973_1362164 8326 G . 8340 1 2193 1 1 Ypestis_CO92_2971759_2982276 Ypestis_Nepal516_1297973_1362164 8327 A . 8340 1 2192 1 1 Ypestis_CO92_2971759_2982276 Ypestis_Nepal516_1297973_1362164 8328 T . 8340 1 2191 1 1 Ypestis_CO92_2971759_2982276 Ypestis_Nepal516_1297973_1362164 8329 C . 8340 1 2190 1 1 Ypestis_CO92_2971759_2982276 Ypestis_Nepal516_1297973_1362164 8330 A . 8340 1 2189 1 1 Ypestis_CO92_2971759_2982276 Ypestis_Nepal516_1297973_1362164 8331 A . 8340 1 2188 1 1 Ypestis_CO92_2971759_2982276 Ypestis_Nepal516_1297973_1362164 8332 A . 8340 1 2187 1 1 Ypestis_CO92_2971759_2982276 Ypestis_Nepal516_1297973_1362164 8333 A . 8340 1 2186 1 1 Ypestis_CO92_2971759_2982276 Ypestis_Nepal516_1297973_1362164 8334 C . 8340 1 2185 1 1 Ypestis_CO92_2971759_2982276 Ypestis_Nepal516_1297973_1362164 8335 A . 8340 1 2184 1 1 Ypestis_CO92_2971759_2982276 Ypestis_Nepal516_1297973_1362164 8336 T . 8340 1 2183 1 1 Ypestis_CO92_2971759_2982276 Ypestis_Nepal516_1297973_1362164 8337 T . 8340 1 2182 1 1 Ypestis_CO92_2971759_2982276 Ypestis_Nepal516_1297973_1362164 8338 G . 8340 1 2181 1 1 Ypestis_CO92_2971759_2982276 Ypestis_Nepal516_1297973_1362164 8339 A . 8340 1 2180 1 1 Ypestis_CO92_2971759_2982276 Ypestis_Nepal516_1297973_1362164 1073 T . 11583 1 1073 1 1 Ypestis_CO92_2983592_3037333 Ypestis_Nepal516_1297973_1362164 1074 G . 11583 1 1074 1 1 Ypestis_CO92_2983592_3037333 Ypestis_Nepal516_1297973_1362164 1075 T . 11583 1 1075 1 1 Ypestis_CO92_2983592_3037333 Ypestis_Nepal516_1297973_1362164 1076 C . 11583 1 1076 1 1 Ypestis_CO92_2983592_3037333 Ypestis_Nepal516_1297973_1362164 1077 A . 11583 1 1077 1 1 Ypestis_CO92_2983592_3037333 Ypestis_Nepal516_1297973_1362164 1078 C . 11583 1 1078 1 1 Ypestis_CO92_2983592_3037333 Ypestis_Nepal516_1297973_1362164 1079 C . 11583 1 1079 1 1 Ypestis_CO92_2983592_3037333 Ypestis_Nepal516_1297973_1362164 1080 T . 11583 1 1080 1 1 Ypestis_CO92_2983592_3037333 Ypestis_Nepal516_1297973_1362164 1081 G . 11583 1 1081 1 1 Ypestis_CO92_2983592_3037333 Ypestis_Nepal516_1297973_1362164 1082 T . 11583 1 1082 1 1 Ypestis_CO92_2983592_3037333 Ypestis_Nepal516_1297973_1362164 1083 C . 11583 1 1083 1 1 Ypestis_CO92_2983592_3037333 Ypestis_Nepal516_1297973_1362164 1084 A . 11583 1 1084 1 1 Ypestis_CO92_2983592_3037333 Ypestis_Nepal516_1297973_1362164 1085 C . 11583 1 1085 1 1 Ypestis_CO92_2983592_3037333 Ypestis_Nepal516_1297973_1362164 1086 C . 11583 1 1086 1 1 Ypestis_CO92_2983592_3037333 Ypestis_Nepal516_1297973_1362164 1087 T . 11583 1 1087 1 1 Ypestis_CO92_2983592_3037333 Ypestis_Nepal516_1297973_1362164 1088 G . 11583 1 1088 1 1 Ypestis_CO92_2983592_3037333 Ypestis_Nepal516_1297973_1362164 1089 T . 11583 1 1089 1 1 Ypestis_CO92_2983592_3037333 Ypestis_Nepal516_1297973_1362164 1090 C . 11583 1 1090 1 1 Ypestis_CO92_2983592_3037333 Ypestis_Nepal516_1297973_1362164 1091 A . 11583 1 1091 1 1 Ypestis_CO92_2983592_3037333 Ypestis_Nepal516_1297973_1362164 1092 C . 11583 1 1092 1 1 Ypestis_CO92_2983592_3037333 Ypestis_Nepal516_1297973_1362164 1093 C . 11583 1 1093 1 1 Ypestis_CO92_2983592_3037333 Ypestis_Nepal516_1297973_1362164 1094 T . 11583 1 1094 1 1 Ypestis_CO92_2983592_3037333 Ypestis_Nepal516_1297973_1362164 1095 G . 11583 1 1095 1 1 Ypestis_CO92_2983592_3037333 Ypestis_Nepal516_1297973_1362164 1096 T . 11583 1 1096 1 1 Ypestis_CO92_2983592_3037333 Ypestis_Nepal516_1297973_1362164 1097 C . 11583 1 1097 1 1 Ypestis_CO92_2983592_3037333 Ypestis_Nepal516_1297973_1362164 1098 A . 11583 1 1098 1 1 Ypestis_CO92_2983592_3037333 Ypestis_Nepal516_1297973_1362164 1099 C . 11583 1 1099 1 1 Ypestis_CO92_2983592_3037333 Ypestis_Nepal516_1297973_1362164 1100 C . 11583 1 1100 1 1 Ypestis_CO92_2983592_3037333 Ypestis_Nepal516_1297973_1362164 1101 T . 11583 1 1101 1 1 Ypestis_CO92_2983592_3037333 Ypestis_Nepal516_1297973_1362164 1102 G . 11583 1 1102 1 1 Ypestis_CO92_2983592_3037333 Ypestis_Nepal516_1297973_1362164 1103 T . 11583 1 1103 1 1 Ypestis_CO92_2983592_3037333 Ypestis_Nepal516_1297973_1362164 1104 C . 11583 1 1104 1 1 Ypestis_CO92_2983592_3037333 Ypestis_Nepal516_1297973_1362164 1105 A . 11583 1 1105 1 1 Ypestis_CO92_2983592_3037333 Ypestis_Nepal516_1297973_1362164 1106 C . 11583 1 1106 1 1 Ypestis_CO92_2983592_3037333 Ypestis_Nepal516_1297973_1362164 1107 C . 11583 1 1107 1 1 Ypestis_CO92_2983592_3037333 Ypestis_Nepal516_1297973_1362164 1108 T . 11583 1 1108 1 1 Ypestis_CO92_2983592_3037333 Ypestis_Nepal516_1297973_1362164 1109 A . 11583 1 1109 1 1 Ypestis_CO92_2983592_3037333 Ypestis_Nepal516_1297973_1362164 1110 C . 11583 1 1110 1 1 Ypestis_CO92_2983592_3037333 Ypestis_Nepal516_1297973_1362164 1111 C . 11583 1 1111 1 1 Ypestis_CO92_2983592_3037333 Ypestis_Nepal516_1297973_1362164 1112 A . 11583 1 1112 1 1 Ypestis_CO92_2983592_3037333 Ypestis_Nepal516_1297973_1362164 1113 C . 11583 1 1113 1 1 Ypestis_CO92_2983592_3037333 Ypestis_Nepal516_1297973_1362164 1114 C . 11583 1 1114 1 1 Ypestis_CO92_2983592_3037333 Ypestis_Nepal516_1297973_1362164 1115 T . 11583 1 1115 1 1 Ypestis_CO92_2983592_3037333 Ypestis_Nepal516_1297973_1362164 1116 A . 11583 1 1116 1 1 Ypestis_CO92_2983592_3037333 Ypestis_Nepal516_1297973_1362164 1117 C . 11583 1 1117 1 1 Ypestis_CO92_2983592_3037333 Ypestis_Nepal516_1297973_1362164 1118 C . 11583 1 1118 1 1 Ypestis_CO92_2983592_3037333 Ypestis_Nepal516_1297973_1362164 1119 A . 11583 1 1119 1 1 Ypestis_CO92_2983592_3037333 Ypestis_Nepal516_1297973_1362164 1120 C . 11583 1 1120 1 1 Ypestis_CO92_2983592_3037333 Ypestis_Nepal516_1297973_1362164 1121 C . 11583 1 1121 1 1 Ypestis_CO92_2983592_3037333 Ypestis_Nepal516_1297973_1362164 1122 T . 11583 1 1122 1 1 Ypestis_CO92_2983592_3037333 Ypestis_Nepal516_1297973_1362164 1123 A . 11583 1 1123 1 1 Ypestis_CO92_2983592_3037333 Ypestis_Nepal516_1297973_1362164 1124 C . 11583 1 1124 1 1 Ypestis_CO92_2983592_3037333 Ypestis_Nepal516_1297973_1362164 1125 C . 11583 1 1125 1 1 Ypestis_CO92_2983592_3037333 Ypestis_Nepal516_1297973_1362164 1126 A . 11583 1 1126 1 1 Ypestis_CO92_2983592_3037333 Ypestis_Nepal516_1297973_1362164 1127 C . 11583 1 1127 1 1 Ypestis_CO92_2983592_3037333 Ypestis_Nepal516_1297973_1362164 1128 C . 11583 1 1128 1 1 Ypestis_CO92_2983592_3037333 Ypestis_Nepal516_1297973_1362164 1129 T . 11583 1 1129 1 1 Ypestis_CO92_2983592_3037333 Ypestis_Nepal516_1297973_1362164 1130 A . 11583 1 1130 1 1 Ypestis_CO92_2983592_3037333 Ypestis_Nepal516_1297973_1362164 1131 C . 11583 1 1131 1 1 Ypestis_CO92_2983592_3037333 Ypestis_Nepal516_1297973_1362164 1132 C . 11583 1 1132 1 1 Ypestis_CO92_2983592_3037333 Ypestis_Nepal516_1297973_1362164 1133 A . 11583 1 1133 1 1 Ypestis_CO92_2983592_3037333 Ypestis_Nepal516_1297973_1362164 1134 C . 11583 1 1134 1 1 Ypestis_CO92_2983592_3037333 Ypestis_Nepal516_1297973_1362164 1135 C . 11583 1 1135 1 1 Ypestis_CO92_2983592_3037333 Ypestis_Nepal516_1297973_1362164 1136 T . 11583 1 1136 1 1 Ypestis_CO92_2983592_3037333 Ypestis_Nepal516_1297973_1362164 1137 A . 11583 1 1137 1 1 Ypestis_CO92_2983592_3037333 Ypestis_Nepal516_1297973_1362164 1138 C . 11583 1 1138 1 1 Ypestis_CO92_2983592_3037333 Ypestis_Nepal516_1297973_1362164 1139 C . 11583 1 1139 1 1 Ypestis_CO92_2983592_3037333 Ypestis_Nepal516_1297973_1362164 1140 A . 11583 1 1140 1 1 Ypestis_CO92_2983592_3037333 Ypestis_Nepal516_1297973_1362164 1141 C . 11583 1 1141 1 1 Ypestis_CO92_2983592_3037333 Ypestis_Nepal516_1297973_1362164 1142 C . 11583 1 1142 1 1 Ypestis_CO92_2983592_3037333 Ypestis_Nepal516_1297973_1362164 1154 A . 11594 1 1154 1 1 Ypestis_CO92_2983592_3037333 Ypestis_Nepal516_1297973_1362164 1155 C . 11594 1 1155 1 1 Ypestis_CO92_2983592_3037333 Ypestis_Nepal516_1297973_1362164 1156 C . 11594 1 1156 1 1 Ypestis_CO92_2983592_3037333 Ypestis_Nepal516_1297973_1362164 1157 T . 11594 1 1157 1 1 Ypestis_CO92_2983592_3037333 Ypestis_Nepal516_1297973_1362164 1158 A . 11594 1 1158 1 1 Ypestis_CO92_2983592_3037333 Ypestis_Nepal516_1297973_1362164 1159 C . 11594 1 1159 1 1 Ypestis_CO92_2983592_3037333 Ypestis_Nepal516_1297973_1362164 1160 A . 11594 1 1160 1 1 Ypestis_CO92_2983592_3037333 Ypestis_Nepal516_1297973_1362164 7109 T . 17542 5949 7109 1 1 Ypestis_CO92_2983592_3037333 Ypestis_Nepal516_1297973_1362164 7106 A G 33105 6 25 1 -1 Ypestis_CO92_3050897_3058026 Ypestis_Nepal516_2474313_2514523 7112 A G 33099 3 19 1 -1 Ypestis_CO92_3050897_3058026 Ypestis_Nepal516_2474313_2514523 7115 G A 33096 3 16 1 -1 Ypestis_CO92_3050897_3058026 Ypestis_Nepal516_2474313_2514523 3368 G . 19384 3368 3368 1 -1 Ypestis_CO92_3068468_3091140 Ypestis_Nepal516_2474313_2514523 13114 . T 9619 0 9560 1 -1 Ypestis_CO92_3068468_3091140 Ypestis_Nepal516_2474313_2514523 13114 . T 9620 0 9560 1 -1 Ypestis_CO92_3068468_3091140 Ypestis_Nepal516_2474313_2514523 13114 . C 9621 0 9560 1 -1 Ypestis_CO92_3068468_3091140 Ypestis_Nepal516_2474313_2514523 13114 . G 9622 0 9560 1 -1 Ypestis_CO92_3068468_3091140 Ypestis_Nepal516_2474313_2514523 13114 . G 9623 0 9560 1 -1 Ypestis_CO92_3068468_3091140 Ypestis_Nepal516_2474313_2514523 13114 . T 9624 0 9560 1 -1 Ypestis_CO92_3068468_3091140 Ypestis_Nepal516_2474313_2514523 13114 . T 9625 0 9560 1 -1 Ypestis_CO92_3068468_3091140 Ypestis_Nepal516_2474313_2514523 13114 . A 9626 0 9560 1 -1 Ypestis_CO92_3068468_3091140 Ypestis_Nepal516_2474313_2514523 13114 . T 9627 0 9560 1 -1 Ypestis_CO92_3068468_3091140 Ypestis_Nepal516_2474313_2514523 13114 . T 9628 0 9560 1 -1 Ypestis_CO92_3068468_3091140 Ypestis_Nepal516_2474313_2514523 13114 . C 9629 0 9560 1 -1 Ypestis_CO92_3068468_3091140 Ypestis_Nepal516_2474313_2514523 13114 . G 9630 0 9560 1 -1 Ypestis_CO92_3068468_3091140 Ypestis_Nepal516_2474313_2514523 13114 . G 9631 0 9560 1 -1 Ypestis_CO92_3068468_3091140 Ypestis_Nepal516_2474313_2514523 13114 . T 9632 0 9560 1 -1 Ypestis_CO92_3068468_3091140 Ypestis_Nepal516_2474313_2514523 13114 . T 9633 0 9560 1 -1 Ypestis_CO92_3068468_3091140 Ypestis_Nepal516_2474313_2514523 13114 . A 9634 0 9560 1 -1 Ypestis_CO92_3068468_3091140 Ypestis_Nepal516_2474313_2514523 13114 . T 9635 0 9560 1 -1 Ypestis_CO92_3068468_3091140 Ypestis_Nepal516_2474313_2514523 13114 . T 9636 0 9560 1 -1 Ypestis_CO92_3068468_3091140 Ypestis_Nepal516_2474313_2514523 13114 . C 9637 0 9560 1 -1 Ypestis_CO92_3068468_3091140 Ypestis_Nepal516_2474313_2514523 13114 . G 9638 0 9560 1 -1 Ypestis_CO92_3068468_3091140 Ypestis_Nepal516_2474313_2514523 13115 . G 9614 0 9559 1 -1 Ypestis_CO92_3068468_3091140 Ypestis_Nepal516_2474313_2514523 13115 . G 9615 0 9559 1 -1 Ypestis_CO92_3068468_3091140 Ypestis_Nepal516_2474313_2514523 13115 . T 9616 0 9559 1 -1 Ypestis_CO92_3068468_3091140 Ypestis_Nepal516_2474313_2514523 13115 . T 9617 0 9559 1 -1 Ypestis_CO92_3068468_3091140 Ypestis_Nepal516_2474313_2514523 13122 . T 9603 0 9552 1 -1 Ypestis_CO92_3068468_3091140 Ypestis_Nepal516_2474313_2514523 13122 . T 9604 0 9552 1 -1 Ypestis_CO92_3068468_3091140 Ypestis_Nepal516_2474313_2514523 13122 . C 9605 0 9552 1 -1 Ypestis_CO92_3068468_3091140 Ypestis_Nepal516_2474313_2514523 13122 . G 9606 0 9552 1 -1 Ypestis_CO92_3068468_3091140 Ypestis_Nepal516_2474313_2514523 13123 . G 9598 0 9551 1 -1 Ypestis_CO92_3068468_3091140 Ypestis_Nepal516_2474313_2514523 13123 . G 9599 0 9551 1 -1 Ypestis_CO92_3068468_3091140 Ypestis_Nepal516_2474313_2514523 13123 . T 9600 0 9551 1 -1 Ypestis_CO92_3068468_3091140 Ypestis_Nepal516_2474313_2514523 13123 . T 9601 0 9551 1 -1 Ypestis_CO92_3068468_3091140 Ypestis_Nepal516_2474313_2514523 13130 . T 9587 0 9544 1 -1 Ypestis_CO92_3068468_3091140 Ypestis_Nepal516_2474313_2514523 13130 . T 9588 0 9544 1 -1 Ypestis_CO92_3068468_3091140 Ypestis_Nepal516_2474313_2514523 13130 . C 9589 0 9544 1 -1 Ypestis_CO92_3068468_3091140 Ypestis_Nepal516_2474313_2514523 13130 . G 9590 0 9544 1 -1 Ypestis_CO92_3068468_3091140 Ypestis_Nepal516_2474313_2514523 13131 . G 9582 0 9543 1 -1 Ypestis_CO92_3068468_3091140 Ypestis_Nepal516_2474313_2514523 13131 . G 9583 0 9543 1 -1 Ypestis_CO92_3068468_3091140 Ypestis_Nepal516_2474313_2514523 13131 . T 9584 0 9543 1 -1 Ypestis_CO92_3068468_3091140 Ypestis_Nepal516_2474313_2514523 13131 . T 9585 0 9543 1 -1 Ypestis_CO92_3068468_3091140 Ypestis_Nepal516_2474313_2514523 13138 . T 9571 0 9536 1 -1 Ypestis_CO92_3068468_3091140 Ypestis_Nepal516_2474313_2514523 13138 . T 9572 0 9536 1 -1 Ypestis_CO92_3068468_3091140 Ypestis_Nepal516_2474313_2514523 13138 . C 9573 0 9536 1 -1 Ypestis_CO92_3068468_3091140 Ypestis_Nepal516_2474313_2514523 13138 . G 9574 0 9536 1 -1 Ypestis_CO92_3068468_3091140 Ypestis_Nepal516_2474313_2514523 13139 . G 9566 0 9535 1 -1 Ypestis_CO92_3068468_3091140 Ypestis_Nepal516_2474313_2514523 13139 . G 9567 0 9535 1 -1 Ypestis_CO92_3068468_3091140 Ypestis_Nepal516_2474313_2514523 13139 . T 9568 0 9535 1 -1 Ypestis_CO92_3068468_3091140 Ypestis_Nepal516_2474313_2514523 13139 . T 9569 0 9535 1 -1 Ypestis_CO92_3068468_3091140 Ypestis_Nepal516_2474313_2514523 13146 . T 9555 0 9528 1 -1 Ypestis_CO92_3068468_3091140 Ypestis_Nepal516_2474313_2514523 13146 . T 9556 0 9528 1 -1 Ypestis_CO92_3068468_3091140 Ypestis_Nepal516_2474313_2514523 13146 . C 9557 0 9528 1 -1 Ypestis_CO92_3068468_3091140 Ypestis_Nepal516_2474313_2514523 13146 . G 9558 0 9528 1 -1 Ypestis_CO92_3068468_3091140 Ypestis_Nepal516_2474313_2514523 13147 . G 9550 0 9527 1 -1 Ypestis_CO92_3068468_3091140 Ypestis_Nepal516_2474313_2514523 13147 . G 9551 0 9527 1 -1 Ypestis_CO92_3068468_3091140 Ypestis_Nepal516_2474313_2514523 13147 . T 9552 0 9527 1 -1 Ypestis_CO92_3068468_3091140 Ypestis_Nepal516_2474313_2514523 13147 . T 9553 0 9527 1 -1 Ypestis_CO92_3068468_3091140 Ypestis_Nepal516_2474313_2514523 13154 . T 9539 0 9520 1 -1 Ypestis_CO92_3068468_3091140 Ypestis_Nepal516_2474313_2514523 13154 . T 9540 0 9520 1 -1 Ypestis_CO92_3068468_3091140 Ypestis_Nepal516_2474313_2514523 13154 . C 9541 0 9520 1 -1 Ypestis_CO92_3068468_3091140 Ypestis_Nepal516_2474313_2514523 13154 . G 9542 0 9520 1 -1 Ypestis_CO92_3068468_3091140 Ypestis_Nepal516_2474313_2514523 13155 . G 9534 0 9519 1 -1 Ypestis_CO92_3068468_3091140 Ypestis_Nepal516_2474313_2514523 13155 . G 9535 0 9519 1 -1 Ypestis_CO92_3068468_3091140 Ypestis_Nepal516_2474313_2514523 13155 . T 9536 0 9519 1 -1 Ypestis_CO92_3068468_3091140 Ypestis_Nepal516_2474313_2514523 13155 . T 9537 0 9519 1 -1 Ypestis_CO92_3068468_3091140 Ypestis_Nepal516_2474313_2514523 13162 . T 9523 0 9512 1 -1 Ypestis_CO92_3068468_3091140 Ypestis_Nepal516_2474313_2514523 13162 . T 9524 0 9512 1 -1 Ypestis_CO92_3068468_3091140 Ypestis_Nepal516_2474313_2514523 13162 . C 9525 0 9512 1 -1 Ypestis_CO92_3068468_3091140 Ypestis_Nepal516_2474313_2514523 13162 . G 9526 0 9512 1 -1 Ypestis_CO92_3068468_3091140 Ypestis_Nepal516_2474313_2514523 13163 . G 9518 0 9511 1 -1 Ypestis_CO92_3068468_3091140 Ypestis_Nepal516_2474313_2514523 13163 . G 9519 0 9511 1 -1 Ypestis_CO92_3068468_3091140 Ypestis_Nepal516_2474313_2514523 13163 . T 9520 0 9511 1 -1 Ypestis_CO92_3068468_3091140 Ypestis_Nepal516_2474313_2514523 13163 . T 9521 0 9511 1 -1 Ypestis_CO92_3068468_3091140 Ypestis_Nepal516_2474313_2514523 13170 . T 9507 0 9504 1 -1 Ypestis_CO92_3068468_3091140 Ypestis_Nepal516_2474313_2514523 13170 . T 9508 0 9504 1 -1 Ypestis_CO92_3068468_3091140 Ypestis_Nepal516_2474313_2514523 13170 . C 9509 0 9504 1 -1 Ypestis_CO92_3068468_3091140 Ypestis_Nepal516_2474313_2514523 13170 . G 9510 0 9504 1 -1 Ypestis_CO92_3068468_3091140 Ypestis_Nepal516_2474313_2514523 13171 . G 9502 0 9502 1 -1 Ypestis_CO92_3068468_3091140 Ypestis_Nepal516_2474313_2514523 13171 . G 9503 0 9503 1 -1 Ypestis_CO92_3068468_3091140 Ypestis_Nepal516_2474313_2514523 13171 . T 9504 0 9503 1 -1 Ypestis_CO92_3068468_3091140 Ypestis_Nepal516_2474313_2514523 13171 . T 9505 0 9503 1 -1 Ypestis_CO92_3068468_3091140 Ypestis_Nepal516_2474313_2514523 16612 A G 6061 3441 6061 1 -1 Ypestis_CO92_3068468_3091140 Ypestis_Nepal516_2474313_2514523 2811 T G 15414 1037 2811 1 -1 Ypestis_CO92_3099028_3117253 Ypestis_Nepal516_2448912_2474131 3848 G A 14377 1037 3848 1 -1 Ypestis_CO92_3099028_3117253 Ypestis_Nepal516_2448912_2474131 15499 T . 2726 2727 2726 1 -1 Ypestis_CO92_3099028_3117253 Ypestis_Nepal516_2448912_2474131 4174 C A 6476 4174 4174 1 -1 Ypestis_CO92_3129779_3140420 Ypestis_Nepal516_1190615_1201263 10434 G A 216 209 209 1 -1 Ypestis_CO92_3129779_3140420 Ypestis_Nepal516_1190615_1201263 8069 . C 26463 0 8069 1 -1 Ypestis_CO92_314185_348752 Ypestis_Nepal516_3796882_3831441 8069 . G 26464 0 8069 1 -1 Ypestis_CO92_314185_348752 Ypestis_Nepal516_3796882_3831441 8069 . T 26465 0 8069 1 -1 Ypestis_CO92_314185_348752 Ypestis_Nepal516_3796882_3831441 8069 . T 26466 0 8069 1 -1 Ypestis_CO92_314185_348752 Ypestis_Nepal516_3796882_3831441 8069 . T 26467 0 8069 1 -1 Ypestis_CO92_314185_348752 Ypestis_Nepal516_3796882_3831441 8069 . T 26468 0 8069 1 -1 Ypestis_CO92_314185_348752 Ypestis_Nepal516_3796882_3831441 8069 . T 26469 0 8069 1 -1 Ypestis_CO92_314185_348752 Ypestis_Nepal516_3796882_3831441 8069 . C 26470 0 8069 1 -1 Ypestis_CO92_314185_348752 Ypestis_Nepal516_3796882_3831441 8069 . G 26471 0 8069 1 -1 Ypestis_CO92_314185_348752 Ypestis_Nepal516_3796882_3831441 8069 . T 26472 0 8069 1 -1 Ypestis_CO92_314185_348752 Ypestis_Nepal516_3796882_3831441 8069 . T 26473 0 8069 1 -1 Ypestis_CO92_314185_348752 Ypestis_Nepal516_3796882_3831441 8069 . T 26474 0 8069 1 -1 Ypestis_CO92_314185_348752 Ypestis_Nepal516_3796882_3831441 8069 . T 26475 0 8069 1 -1 Ypestis_CO92_314185_348752 Ypestis_Nepal516_3796882_3831441 8069 . T 26476 0 8069 1 -1 Ypestis_CO92_314185_348752 Ypestis_Nepal516_3796882_3831441 8069 . C 26477 0 8069 1 -1 Ypestis_CO92_314185_348752 Ypestis_Nepal516_3796882_3831441 8069 . G 26478 0 8069 1 -1 Ypestis_CO92_314185_348752 Ypestis_Nepal516_3796882_3831441 8069 . T 26479 0 8069 1 -1 Ypestis_CO92_314185_348752 Ypestis_Nepal516_3796882_3831441 8069 . T 26480 0 8069 1 -1 Ypestis_CO92_314185_348752 Ypestis_Nepal516_3796882_3831441 8069 . T 26481 0 8069 1 -1 Ypestis_CO92_314185_348752 Ypestis_Nepal516_3796882_3831441 8069 . T 26482 0 8069 1 -1 Ypestis_CO92_314185_348752 Ypestis_Nepal516_3796882_3831441 8069 . T 26483 0 8069 1 -1 Ypestis_CO92_314185_348752 Ypestis_Nepal516_3796882_3831441 8069 . C 26484 0 8069 1 -1 Ypestis_CO92_314185_348752 Ypestis_Nepal516_3796882_3831441 8069 . G 26485 0 8069 1 -1 Ypestis_CO92_314185_348752 Ypestis_Nepal516_3796882_3831441 8069 . T 26486 0 8069 1 -1 Ypestis_CO92_314185_348752 Ypestis_Nepal516_3796882_3831441 8069 . T 26487 0 8069 1 -1 Ypestis_CO92_314185_348752 Ypestis_Nepal516_3796882_3831441 8069 . T 26488 0 8069 1 -1 Ypestis_CO92_314185_348752 Ypestis_Nepal516_3796882_3831441 8069 . T 26489 0 8069 1 -1 Ypestis_CO92_314185_348752 Ypestis_Nepal516_3796882_3831441 8069 . T 26490 0 8069 1 -1 Ypestis_CO92_314185_348752 Ypestis_Nepal516_3796882_3831441 11652 T C 22880 3583 11652 1 -1 Ypestis_CO92_314185_348752 Ypestis_Nepal516_3796882_3831441 21144 G . 13388 1 13388 1 -1 Ypestis_CO92_314185_348752 Ypestis_Nepal516_3796882_3831441 21145 T . 13388 1 13388 1 -1 Ypestis_CO92_314185_348752 Ypestis_Nepal516_3796882_3831441 21146 T . 13388 1 13388 1 -1 Ypestis_CO92_314185_348752 Ypestis_Nepal516_3796882_3831441 21147 T . 13388 1 13388 1 -1 Ypestis_CO92_314185_348752 Ypestis_Nepal516_3796882_3831441 21148 T . 13388 1 13388 1 -1 Ypestis_CO92_314185_348752 Ypestis_Nepal516_3796882_3831441 21149 A . 13388 1 13388 1 -1 Ypestis_CO92_314185_348752 Ypestis_Nepal516_3796882_3831441 21150 G . 13388 1 13388 1 -1 Ypestis_CO92_314185_348752 Ypestis_Nepal516_3796882_3831441 21151 A . 13388 1 13388 1 -1 Ypestis_CO92_314185_348752 Ypestis_Nepal516_3796882_3831441 21152 T . 13388 1 13388 1 -1 Ypestis_CO92_314185_348752 Ypestis_Nepal516_3796882_3831441 21153 G . 13388 1 13388 1 -1 Ypestis_CO92_314185_348752 Ypestis_Nepal516_3796882_3831441 21154 T . 13388 1 13388 1 -1 Ypestis_CO92_314185_348752 Ypestis_Nepal516_3796882_3831441 21155 C . 13388 1 13388 1 -1 Ypestis_CO92_314185_348752 Ypestis_Nepal516_3796882_3831441 21156 A . 13388 1 13388 1 -1 Ypestis_CO92_314185_348752 Ypestis_Nepal516_3796882_3831441 21157 G . 13388 1 13388 1 -1 Ypestis_CO92_314185_348752 Ypestis_Nepal516_3796882_3831441 21158 A . 13388 1 13388 1 -1 Ypestis_CO92_314185_348752 Ypestis_Nepal516_3796882_3831441 21159 T . 13388 1 13388 1 -1 Ypestis_CO92_314185_348752 Ypestis_Nepal516_3796882_3831441 21160 T . 13388 1 13388 1 -1 Ypestis_CO92_314185_348752 Ypestis_Nepal516_3796882_3831441 21161 A . 13388 1 13388 1 -1 Ypestis_CO92_314185_348752 Ypestis_Nepal516_3796882_3831441 21162 G . 13388 1 13388 1 -1 Ypestis_CO92_314185_348752 Ypestis_Nepal516_3796882_3831441 21163 T . 13388 1 13388 1 -1 Ypestis_CO92_314185_348752 Ypestis_Nepal516_3796882_3831441 21164 T . 13388 1 13388 1 -1 Ypestis_CO92_314185_348752 Ypestis_Nepal516_3796882_3831441 21165 T . 13388 1 13388 1 -1 Ypestis_CO92_314185_348752 Ypestis_Nepal516_3796882_3831441 21166 T . 13388 1 13388 1 -1 Ypestis_CO92_314185_348752 Ypestis_Nepal516_3796882_3831441 21167 A . 13388 1 13388 1 -1 Ypestis_CO92_314185_348752 Ypestis_Nepal516_3796882_3831441 21168 G . 13388 1 13388 1 -1 Ypestis_CO92_314185_348752 Ypestis_Nepal516_3796882_3831441 21169 A . 13388 1 13388 1 -1 Ypestis_CO92_314185_348752 Ypestis_Nepal516_3796882_3831441 21170 C . 13388 1 13388 1 -1 Ypestis_CO92_314185_348752 Ypestis_Nepal516_3796882_3831441 21171 G . 13388 1 13388 1 -1 Ypestis_CO92_314185_348752 Ypestis_Nepal516_3796882_3831441 21172 T . 13388 1 13388 1 -1 Ypestis_CO92_314185_348752 Ypestis_Nepal516_3796882_3831441 21173 C . 13388 1 13388 1 -1 Ypestis_CO92_314185_348752 Ypestis_Nepal516_3796882_3831441 21174 A . 13388 1 13388 1 -1 Ypestis_CO92_314185_348752 Ypestis_Nepal516_3796882_3831441 21175 G . 13388 1 13388 1 -1 Ypestis_CO92_314185_348752 Ypestis_Nepal516_3796882_3831441 21176 A . 13388 1 13388 1 -1 Ypestis_CO92_314185_348752 Ypestis_Nepal516_3796882_3831441 21177 T . 13388 1 13388 1 -1 Ypestis_CO92_314185_348752 Ypestis_Nepal516_3796882_3831441 21178 T . 13388 1 13388 1 -1 Ypestis_CO92_314185_348752 Ypestis_Nepal516_3796882_3831441 21179 A . 13388 1 13388 1 -1 Ypestis_CO92_314185_348752 Ypestis_Nepal516_3796882_3831441 21649 C T 12919 470 12919 1 -1 Ypestis_CO92_314185_348752 Ypestis_Nepal516_3796882_3831441 3138 A C 7572 3138 3138 1 -1 Ypestis_CO92_3142386_3153096 Ypestis_Nepal516_1177948_1188659 8277 . C 36146 8277 8277 1 -1 Ypestis_CO92_3153820_3198222 Ypestis_Nepal516_1451726_1496149 36580 A G 7843 3923 7824 1 -1 Ypestis_CO92_3153820_3198222 Ypestis_Nepal516_1451726_1496149 40503 . T 3900 0 3900 1 -1 Ypestis_CO92_3153820_3198222 Ypestis_Nepal516_1451726_1496149 40503 . G 3901 0 3901 1 -1 Ypestis_CO92_3153820_3198222 Ypestis_Nepal516_1451726_1496149 40503 . A 3902 0 3901 1 -1 Ypestis_CO92_3153820_3198222 Ypestis_Nepal516_1451726_1496149 40503 . G 3903 0 3901 1 -1 Ypestis_CO92_3153820_3198222 Ypestis_Nepal516_1451726_1496149 40503 . A 3904 0 3901 1 -1 Ypestis_CO92_3153820_3198222 Ypestis_Nepal516_1451726_1496149 40503 . C 3905 0 3901 1 -1 Ypestis_CO92_3153820_3198222 Ypestis_Nepal516_1451726_1496149 40503 . A 3906 0 3901 1 -1 Ypestis_CO92_3153820_3198222 Ypestis_Nepal516_1451726_1496149 40503 . A 3907 0 3901 1 -1 Ypestis_CO92_3153820_3198222 Ypestis_Nepal516_1451726_1496149 40503 . A 3908 0 3901 1 -1 Ypestis_CO92_3153820_3198222 Ypestis_Nepal516_1451726_1496149 40503 . G 3909 0 3901 1 -1 Ypestis_CO92_3153820_3198222 Ypestis_Nepal516_1451726_1496149 40503 . T 3910 0 3901 1 -1 Ypestis_CO92_3153820_3198222 Ypestis_Nepal516_1451726_1496149 40503 . A 3911 0 3901 1 -1 Ypestis_CO92_3153820_3198222 Ypestis_Nepal516_1451726_1496149 40503 . A 3912 0 3901 1 -1 Ypestis_CO92_3153820_3198222 Ypestis_Nepal516_1451726_1496149 40503 . A 3913 0 3901 1 -1 Ypestis_CO92_3153820_3198222 Ypestis_Nepal516_1451726_1496149 40503 . A 3914 0 3901 1 -1 Ypestis_CO92_3153820_3198222 Ypestis_Nepal516_1451726_1496149 40503 . A 3915 0 3901 1 -1 Ypestis_CO92_3153820_3198222 Ypestis_Nepal516_1451726_1496149 40503 . T 3916 0 3901 1 -1 Ypestis_CO92_3153820_3198222 Ypestis_Nepal516_1451726_1496149 40503 . A 3917 0 3901 1 -1 Ypestis_CO92_3153820_3198222 Ypestis_Nepal516_1451726_1496149 40503 . G 3918 0 3901 1 -1 Ypestis_CO92_3153820_3198222 Ypestis_Nepal516_1451726_1496149 40503 . A 3919 0 3901 1 -1 Ypestis_CO92_3153820_3198222 Ypestis_Nepal516_1451726_1496149 4827 A . 23478 1 4827 1 -1 Ypestis_CO92_3203392_3231858 Ypestis_Nepal516_1418252_1446556 4828 G . 23478 1 4828 1 -1 Ypestis_CO92_3203392_3231858 Ypestis_Nepal516_1418252_1446556 4829 T . 23478 1 4828 1 -1 Ypestis_CO92_3203392_3231858 Ypestis_Nepal516_1418252_1446556 4830 G . 23478 1 4828 1 -1 Ypestis_CO92_3203392_3231858 Ypestis_Nepal516_1418252_1446556 4831 A . 23478 1 4828 1 -1 Ypestis_CO92_3203392_3231858 Ypestis_Nepal516_1418252_1446556 4832 C . 23478 1 4828 1 -1 Ypestis_CO92_3203392_3231858 Ypestis_Nepal516_1418252_1446556 4833 G . 23478 1 4828 1 -1 Ypestis_CO92_3203392_3231858 Ypestis_Nepal516_1418252_1446556 4834 C . 23478 1 4828 1 -1 Ypestis_CO92_3203392_3231858 Ypestis_Nepal516_1418252_1446556 4835 A . 23478 1 4828 1 -1 Ypestis_CO92_3203392_3231858 Ypestis_Nepal516_1418252_1446556 4836 G . 23478 1 4828 1 -1 Ypestis_CO92_3203392_3231858 Ypestis_Nepal516_1418252_1446556 4837 T . 23478 1 4828 1 -1 Ypestis_CO92_3203392_3231858 Ypestis_Nepal516_1418252_1446556 4838 G . 23478 1 4828 1 -1 Ypestis_CO92_3203392_3231858 Ypestis_Nepal516_1418252_1446556 4839 A . 23478 1 4828 1 -1 Ypestis_CO92_3203392_3231858 Ypestis_Nepal516_1418252_1446556 4840 C . 23478 1 4828 1 -1 Ypestis_CO92_3203392_3231858 Ypestis_Nepal516_1418252_1446556 4841 G . 23478 1 4828 1 -1 Ypestis_CO92_3203392_3231858 Ypestis_Nepal516_1418252_1446556 4842 C . 23478 1 4828 1 -1 Ypestis_CO92_3203392_3231858 Ypestis_Nepal516_1418252_1446556 19785 T C 8536 186 8536 1 -1 Ypestis_CO92_3203392_3231858 Ypestis_Nepal516_1418252_1446556 19971 . A 8336 0 8336 1 -1 Ypestis_CO92_3203392_3231858 Ypestis_Nepal516_1418252_1446556 19971 . C 8337 0 8337 1 -1 Ypestis_CO92_3203392_3231858 Ypestis_Nepal516_1418252_1446556 19971 . A 8338 0 8338 1 -1 Ypestis_CO92_3203392_3231858 Ypestis_Nepal516_1418252_1446556 19971 . A 8339 0 8339 1 -1 Ypestis_CO92_3203392_3231858 Ypestis_Nepal516_1418252_1446556 19971 . A 8340 0 8340 1 -1 Ypestis_CO92_3203392_3231858 Ypestis_Nepal516_1418252_1446556 19971 . A 8341 0 8341 1 -1 Ypestis_CO92_3203392_3231858 Ypestis_Nepal516_1418252_1446556 19971 . A 8342 0 8342 1 -1 Ypestis_CO92_3203392_3231858 Ypestis_Nepal516_1418252_1446556 19971 . G 8343 0 8343 1 -1 Ypestis_CO92_3203392_3231858 Ypestis_Nepal516_1418252_1446556 19971 . T 8344 0 8344 1 -1 Ypestis_CO92_3203392_3231858 Ypestis_Nepal516_1418252_1446556 19971 . A 8345 0 8345 1 -1 Ypestis_CO92_3203392_3231858 Ypestis_Nepal516_1418252_1446556 19971 . T 8346 0 8346 1 -1 Ypestis_CO92_3203392_3231858 Ypestis_Nepal516_1418252_1446556 19971 . A 8347 0 8347 1 -1 Ypestis_CO92_3203392_3231858 Ypestis_Nepal516_1418252_1446556 19971 . A 8348 0 8348 1 -1 Ypestis_CO92_3203392_3231858 Ypestis_Nepal516_1418252_1446556 19971 . G 8349 0 8349 1 -1 Ypestis_CO92_3203392_3231858 Ypestis_Nepal516_1418252_1446556 852 A G 8814 852 852 1 -1 Ypestis_CO92_3243353_3259634 Ypestis_Nepal516_1397804_1418072 2299 . C 7352 0 2299 1 -1 Ypestis_CO92_3243353_3259634 Ypestis_Nepal516_1397804_1418072 2299 . G 7353 0 2299 1 -1 Ypestis_CO92_3243353_3259634 Ypestis_Nepal516_1397804_1418072 2299 . T 7354 0 2299 1 -1 Ypestis_CO92_3243353_3259634 Ypestis_Nepal516_1397804_1418072 2299 . T 7355 0 2299 1 -1 Ypestis_CO92_3243353_3259634 Ypestis_Nepal516_1397804_1418072 2299 . T 7356 0 2299 1 -1 Ypestis_CO92_3243353_3259634 Ypestis_Nepal516_1397804_1418072 2299 . C 7357 0 2299 1 -1 Ypestis_CO92_3243353_3259634 Ypestis_Nepal516_1397804_1418072 2299 . A 7358 0 2299 1 -1 Ypestis_CO92_3243353_3259634 Ypestis_Nepal516_1397804_1418072 2299 . A 7359 0 2299 1 -1 Ypestis_CO92_3243353_3259634 Ypestis_Nepal516_1397804_1418072 2299 . C 7360 0 2299 1 -1 Ypestis_CO92_3243353_3259634 Ypestis_Nepal516_1397804_1418072 2299 . T 7361 0 2299 1 -1 Ypestis_CO92_3243353_3259634 Ypestis_Nepal516_1397804_1418072 2299 . A 7362 0 2299 1 -1 Ypestis_CO92_3243353_3259634 Ypestis_Nepal516_1397804_1418072 2299 . A 7363 0 2299 1 -1 Ypestis_CO92_3243353_3259634 Ypestis_Nepal516_1397804_1418072 2299 . C 7364 0 2299 1 -1 Ypestis_CO92_3243353_3259634 Ypestis_Nepal516_1397804_1418072 2299 . A 7365 0 2299 1 -1 Ypestis_CO92_3243353_3259634 Ypestis_Nepal516_1397804_1418072 2299 . G 7366 0 2299 1 -1 Ypestis_CO92_3243353_3259634 Ypestis_Nepal516_1397804_1418072 4895 A G 4756 2589 4756 1 -1 Ypestis_CO92_3243353_3259634 Ypestis_Nepal516_1397804_1418072 7484 G A 2167 2167 2167 1 -1 Ypestis_CO92_3243353_3259634 Ypestis_Nepal516_1397804_1418072 3840 A G 5963 3840 3840 1 -1 Ypestis_CO92_3263279_3273081 Ypestis_Nepal516_1375767_1385569 10838 G T 20140 3096 10838 1 -1 Ypestis_CO92_3285820_3316768 Ypestis_Nepal516_1607836_1638813 13934 . T 17026 0 13934 1 -1 Ypestis_CO92_3285820_3316768 Ypestis_Nepal516_1607836_1638813 13934 . G 17027 0 13934 1 -1 Ypestis_CO92_3285820_3316768 Ypestis_Nepal516_1607836_1638813 13934 . A 17028 0 13934 1 -1 Ypestis_CO92_3285820_3316768 Ypestis_Nepal516_1607836_1638813 13934 . T 17029 0 13934 1 -1 Ypestis_CO92_3285820_3316768 Ypestis_Nepal516_1607836_1638813 13934 . A 17030 0 13934 1 -1 Ypestis_CO92_3285820_3316768 Ypestis_Nepal516_1607836_1638813 13934 . T 17031 0 13934 1 -1 Ypestis_CO92_3285820_3316768 Ypestis_Nepal516_1607836_1638813 13934 . A 17032 0 13934 1 -1 Ypestis_CO92_3285820_3316768 Ypestis_Nepal516_1607836_1638813 13934 . A 17033 0 13934 1 -1 Ypestis_CO92_3285820_3316768 Ypestis_Nepal516_1607836_1638813 13934 . C 17034 0 13934 1 -1 Ypestis_CO92_3285820_3316768 Ypestis_Nepal516_1607836_1638813 13934 . C 17035 0 13934 1 -1 Ypestis_CO92_3285820_3316768 Ypestis_Nepal516_1607836_1638813 13934 . G 17036 0 13934 1 -1 Ypestis_CO92_3285820_3316768 Ypestis_Nepal516_1607836_1638813 13934 . G 17037 0 13934 1 -1 Ypestis_CO92_3285820_3316768 Ypestis_Nepal516_1607836_1638813 13934 . A 17038 0 13934 1 -1 Ypestis_CO92_3285820_3316768 Ypestis_Nepal516_1607836_1638813 13934 . G 17039 0 13934 1 -1 Ypestis_CO92_3285820_3316768 Ypestis_Nepal516_1607836_1638813 13934 . T 17040 0 13934 1 -1 Ypestis_CO92_3285820_3316768 Ypestis_Nepal516_1607836_1638813 13934 . C 17041 0 13934 1 -1 Ypestis_CO92_3285820_3316768 Ypestis_Nepal516_1607836_1638813 13934 . T 17042 0 13934 1 -1 Ypestis_CO92_3285820_3316768 Ypestis_Nepal516_1607836_1638813 13934 . A 17043 0 13934 1 -1 Ypestis_CO92_3285820_3316768 Ypestis_Nepal516_1607836_1638813 17365 . C 13588 0 13585 1 -1 Ypestis_CO92_3285820_3316768 Ypestis_Nepal516_1607836_1638813 17365 . A 13589 0 13585 1 -1 Ypestis_CO92_3285820_3316768 Ypestis_Nepal516_1607836_1638813 17365 . A 13590 0 13585 1 -1 Ypestis_CO92_3285820_3316768 Ypestis_Nepal516_1607836_1638813 17365 . A 13591 0 13585 1 -1 Ypestis_CO92_3285820_3316768 Ypestis_Nepal516_1607836_1638813 17365 . A 13592 0 13585 1 -1 Ypestis_CO92_3285820_3316768 Ypestis_Nepal516_1607836_1638813 17365 . G 13593 0 13585 1 -1 Ypestis_CO92_3285820_3316768 Ypestis_Nepal516_1607836_1638813 17365 . T 13594 0 13585 1 -1 Ypestis_CO92_3285820_3316768 Ypestis_Nepal516_1607836_1638813 17804 . T 13145 0 13145 1 -1 Ypestis_CO92_3285820_3316768 Ypestis_Nepal516_1607836_1638813 17804 . T 13146 0 13146 1 -1 Ypestis_CO92_3285820_3316768 Ypestis_Nepal516_1607836_1638813 17804 . A 13147 0 13146 1 -1 Ypestis_CO92_3285820_3316768 Ypestis_Nepal516_1607836_1638813 17804 . T 13148 0 13146 1 -1 Ypestis_CO92_3285820_3316768 Ypestis_Nepal516_1607836_1638813 28194 G T 2755 2755 2755 1 -1 Ypestis_CO92_3285820_3316768 Ypestis_Nepal516_1607836_1638813 4926 A G 10594 10 4926 1 -1 Ypestis_CO92_3317135_3332619 Ypestis_Nepal516_1591950_1607469 4936 C T 10584 9 4936 1 -1 Ypestis_CO92_3317135_3332619 Ypestis_Nepal516_1591950_1607469 4945 G A 10575 9 4945 1 -1 Ypestis_CO92_3317135_3332619 Ypestis_Nepal516_1591950_1607469 4964 . G 10537 0 4964 1 -1 Ypestis_CO92_3317135_3332619 Ypestis_Nepal516_1591950_1607469 4964 . T 10538 0 4964 1 -1 Ypestis_CO92_3317135_3332619 Ypestis_Nepal516_1591950_1607469 4964 . T 10539 0 4964 1 -1 Ypestis_CO92_3317135_3332619 Ypestis_Nepal516_1591950_1607469 4964 . T 10540 0 4964 1 -1 Ypestis_CO92_3317135_3332619 Ypestis_Nepal516_1591950_1607469 4964 . T 10541 0 4964 1 -1 Ypestis_CO92_3317135_3332619 Ypestis_Nepal516_1591950_1607469 4964 . A 10542 0 4964 1 -1 Ypestis_CO92_3317135_3332619 Ypestis_Nepal516_1591950_1607469 4964 . C 10543 0 4964 1 -1 Ypestis_CO92_3317135_3332619 Ypestis_Nepal516_1591950_1607469 4964 . G 10544 0 4964 1 -1 Ypestis_CO92_3317135_3332619 Ypestis_Nepal516_1591950_1607469 4964 . T 10545 0 4964 1 -1 Ypestis_CO92_3317135_3332619 Ypestis_Nepal516_1591950_1607469 4964 . C 10546 0 4964 1 -1 Ypestis_CO92_3317135_3332619 Ypestis_Nepal516_1591950_1607469 4964 . G 10547 0 4964 1 -1 Ypestis_CO92_3317135_3332619 Ypestis_Nepal516_1591950_1607469 4964 . A 10548 0 4964 1 -1 Ypestis_CO92_3317135_3332619 Ypestis_Nepal516_1591950_1607469 4964 . G 10549 0 4964 1 -1 Ypestis_CO92_3317135_3332619 Ypestis_Nepal516_1591950_1607469 4964 . A 10550 0 4964 1 -1 Ypestis_CO92_3317135_3332619 Ypestis_Nepal516_1591950_1607469 4964 . T 10551 0 4964 1 -1 Ypestis_CO92_3317135_3332619 Ypestis_Nepal516_1591950_1607469 4964 . A 10552 0 4964 1 -1 Ypestis_CO92_3317135_3332619 Ypestis_Nepal516_1591950_1607469 4964 . G 10553 0 4964 1 -1 Ypestis_CO92_3317135_3332619 Ypestis_Nepal516_1591950_1607469 4964 . T 10554 0 4964 1 -1 Ypestis_CO92_3317135_3332619 Ypestis_Nepal516_1591950_1607469 4964 . G 10555 0 4964 1 -1 Ypestis_CO92_3317135_3332619 Ypestis_Nepal516_1591950_1607469 7825 A G 7676 2861 7661 1 -1 Ypestis_CO92_3317135_3332619 Ypestis_Nepal516_1591950_1607469 13728 . A 1757 0 1757 1 -1 Ypestis_CO92_3317135_3332619 Ypestis_Nepal516_1591950_1607469 13728 . T 1758 0 1758 1 -1 Ypestis_CO92_3317135_3332619 Ypestis_Nepal516_1591950_1607469 13728 . C 1759 0 1758 1 -1 Ypestis_CO92_3317135_3332619 Ypestis_Nepal516_1591950_1607469 13728 . A 1760 0 1758 1 -1 Ypestis_CO92_3317135_3332619 Ypestis_Nepal516_1591950_1607469 13728 . A 1761 0 1758 1 -1 Ypestis_CO92_3317135_3332619 Ypestis_Nepal516_1591950_1607469 13728 . T 1762 0 1758 1 -1 Ypestis_CO92_3317135_3332619 Ypestis_Nepal516_1591950_1607469 13728 . A 1763 0 1758 1 -1 Ypestis_CO92_3317135_3332619 Ypestis_Nepal516_1591950_1607469 13728 . T 1764 0 1758 1 -1 Ypestis_CO92_3317135_3332619 Ypestis_Nepal516_1591950_1607469 13728 . T 1765 0 1758 1 -1 Ypestis_CO92_3317135_3332619 Ypestis_Nepal516_1591950_1607469 13728 . T 1766 0 1758 1 -1 Ypestis_CO92_3317135_3332619 Ypestis_Nepal516_1591950_1607469 13728 . A 1767 0 1758 1 -1 Ypestis_CO92_3317135_3332619 Ypestis_Nepal516_1591950_1607469 13728 . C 1768 0 1758 1 -1 Ypestis_CO92_3317135_3332619 Ypestis_Nepal516_1591950_1607469 13728 . T 1769 0 1758 1 -1 Ypestis_CO92_3317135_3332619 Ypestis_Nepal516_1591950_1607469 13728 . A 1770 0 1758 1 -1 Ypestis_CO92_3317135_3332619 Ypestis_Nepal516_1591950_1607469 13728 . C 1771 0 1758 1 -1 Ypestis_CO92_3317135_3332619 Ypestis_Nepal516_1591950_1607469 13728 . C 1772 0 1758 1 -1 Ypestis_CO92_3317135_3332619 Ypestis_Nepal516_1591950_1607469 10644 C G 3263 3263 3263 1 -1 Ypestis_CO92_3346736_3360642 Ypestis_Nepal516_1563927_1577833 1771 A G 54897 1771 1771 1 -1 Ypestis_CO92_3360821_3417495 Ypestis_Nepal516_1507081_1563748 14811 C . 41857 756 14811 1 -1 Ypestis_CO92_3360821_3417495 Ypestis_Nepal516_1507081_1563748 15567 A G 41102 756 15567 1 -1 Ypestis_CO92_3360821_3417495 Ypestis_Nepal516_1507081_1563748 26727 C . 29942 1 26727 1 -1 Ypestis_CO92_3360821_3417495 Ypestis_Nepal516_1507081_1563748 26728 C . 29942 1 26727 1 -1 Ypestis_CO92_3360821_3417495 Ypestis_Nepal516_1507081_1563748 26729 C . 29942 1 26727 1 -1 Ypestis_CO92_3360821_3417495 Ypestis_Nepal516_1507081_1563748 26730 T . 29942 1 26727 1 -1 Ypestis_CO92_3360821_3417495 Ypestis_Nepal516_1507081_1563748 26731 T . 29942 1 26727 1 -1 Ypestis_CO92_3360821_3417495 Ypestis_Nepal516_1507081_1563748 26732 C . 29942 1 26727 1 -1 Ypestis_CO92_3360821_3417495 Ypestis_Nepal516_1507081_1563748 36220 A G 20455 9488 20455 1 -1 Ypestis_CO92_3360821_3417495 Ypestis_Nepal516_1507081_1563748 3097 A G 6361 3097 3097 1 -1 Ypestis_CO92_3418239_3427700 Ypestis_Nepal516_1496880_1506337 14190 A T 1830 1830 1830 1 -1 Ypestis_CO92_3428428_3444447 Ypestis_Nepal516_1160493_1171607 8068 T G 151 151 151 1 -1 Ypestis_CO92_3446698_3482485 Ypestis_Nepal516_1150024_1158242 12024 T . 74041 1 3813 1 -1 Ypestis_CO92_3446698_3482485 Ypestis_Nepal516_1070854_1148706 12025 A . 74041 1 3813 1 -1 Ypestis_CO92_3446698_3482485 Ypestis_Nepal516_1070854_1148706 12026 G . 74041 1 3813 1 -1 Ypestis_CO92_3446698_3482485 Ypestis_Nepal516_1070854_1148706 12027 C . 74041 1 3813 1 -1 Ypestis_CO92_3446698_3482485 Ypestis_Nepal516_1070854_1148706 12028 A . 74041 1 3813 1 -1 Ypestis_CO92_3446698_3482485 Ypestis_Nepal516_1070854_1148706 12029 A . 74041 1 3813 1 -1 Ypestis_CO92_3446698_3482485 Ypestis_Nepal516_1070854_1148706 12030 A . 74041 1 3813 1 -1 Ypestis_CO92_3446698_3482485 Ypestis_Nepal516_1070854_1148706 12797 . C 73274 767 4580 1 -1 Ypestis_CO92_3446698_3482485 Ypestis_Nepal516_1070854_1148706 17273 A G 68798 4476 9056 1 -1 Ypestis_CO92_3446698_3482485 Ypestis_Nepal516_1070854_1148706 24747 G . 61324 7474 11042 1 -1 Ypestis_CO92_3446698_3482485 Ypestis_Nepal516_1070854_1148706 5158 G . 45108 5158 5158 1 -1 Ypestis_CO92_3484461_3541710 Ypestis_Nepal516_1070854_1148706 55249 C T 2001 2001 2001 1 -1 Ypestis_CO92_3484461_3541710 Ypestis_Nepal516_1061912_1068891 2968 T G 26235 2968 2968 1 -1 Ypestis_CO92_348854_366835 Ypestis_Nepal516_3767578_3796780 10021 C A 19182 7053 7962 1 -1 Ypestis_CO92_348854_366835 Ypestis_Nepal516_3767578_3796780 1832 A C 69411 1832 1832 1 -1 Ypestis_CO92_3549258_3556628 Ypestis_Nepal516_982411_1053653 6653 C T 57186 6653 6653 1 -1 Ypestis_CO92_3557374_3574421 Ypestis_Nepal516_982411_1053653 14158 A G 49681 2890 2891 1 -1 Ypestis_CO92_3557374_3574421 Ypestis_Nepal516_982411_1053653 3619 G A 43177 3619 3619 1 -1 Ypestis_CO92_3576376_3623161 Ypestis_Nepal516_982411_1053653 30699 . T 16089 0 16088 1 -1 Ypestis_CO92_3576376_3623161 Ypestis_Nepal516_982411_1053653 30699 . G 16090 0 16088 1 -1 Ypestis_CO92_3576376_3623161 Ypestis_Nepal516_982411_1053653 30699 . A 16091 0 16088 1 -1 Ypestis_CO92_3576376_3623161 Ypestis_Nepal516_982411_1053653 30699 . C 16092 0 16088 1 -1 Ypestis_CO92_3576376_3623161 Ypestis_Nepal516_982411_1053653 30699 . C 16093 0 16088 1 -1 Ypestis_CO92_3576376_3623161 Ypestis_Nepal516_982411_1053653 30699 . G 16094 0 16088 1 -1 Ypestis_CO92_3576376_3623161 Ypestis_Nepal516_982411_1053653 30699 . A 16095 0 16088 1 -1 Ypestis_CO92_3576376_3623161 Ypestis_Nepal516_982411_1053653 30699 . G 16096 0 16088 1 -1 Ypestis_CO92_3576376_3623161 Ypestis_Nepal516_982411_1053653 32557 T C 14231 1858 14230 1 -1 Ypestis_CO92_3576376_3623161 Ypestis_Nepal516_982411_1053653 40358 A G 6430 2767 6429 1 -1 Ypestis_CO92_3576376_3623161 Ypestis_Nepal516_982411_1053653 43125 . C 3661 0 3661 1 -1 Ypestis_CO92_3576376_3623161 Ypestis_Nepal516_982411_1053653 43125 . C 3662 0 3662 1 -1 Ypestis_CO92_3576376_3623161 Ypestis_Nepal516_982411_1053653 223 G . 23232 1 223 1 -1 Ypestis_CO92_3623340_3625255 Ypestis_Nepal516_958778_982232 224 G . 23232 1 224 1 -1 Ypestis_CO92_3623340_3625255 Ypestis_Nepal516_958778_982232 225 G . 23232 1 224 1 -1 Ypestis_CO92_3623340_3625255 Ypestis_Nepal516_958778_982232 226 A . 23232 1 224 1 -1 Ypestis_CO92_3623340_3625255 Ypestis_Nepal516_958778_982232 227 C . 23232 1 224 1 -1 Ypestis_CO92_3623340_3625255 Ypestis_Nepal516_958778_982232 228 G . 23232 1 224 1 -1 Ypestis_CO92_3623340_3625255 Ypestis_Nepal516_958778_982232 229 A . 23232 1 224 1 -1 Ypestis_CO92_3623340_3625255 Ypestis_Nepal516_958778_982232 230 A . 23232 1 224 1 -1 Ypestis_CO92_3623340_3625255 Ypestis_Nepal516_958778_982232 231 G . 23232 1 224 1 -1 Ypestis_CO92_3623340_3625255 Ypestis_Nepal516_958778_982232 17938 C G 3612 2716 3612 1 -1 Ypestis_CO92_3627214_3648895 Ypestis_Nepal516_958778_982232 20654 C T 896 896 896 1 -1 Ypestis_CO92_3627214_3648895 Ypestis_Nepal516_958778_982232 1000 T C 5303 1000 1000 1 -1 Ypestis_CO92_3654610_3660911 Ypestis_Nepal516_946629_952931 886 C T 6701 168 168 1 -1 Ypestis_CO92_3661634_3662686 Ypestis_Nepal516_938321_945901 3155 A G 3373 3155 3155 1 -1 Ypestis_CO92_3664652_3671179 Ypestis_Nepal516_938321_945901 607 T . 3175 607 607 1 -1 Ypestis_CO92_3678648_3682221 Ypestis_Nepal516_925111_928892 13995 A . 17261 1 13995 1 -1 Ypestis_CO92_3682816_3714074 Ypestis_Nepal516_893486_924741 13996 G . 17261 1 13996 1 -1 Ypestis_CO92_3682816_3714074 Ypestis_Nepal516_893486_924741 13997 T . 17261 1 13996 1 -1 Ypestis_CO92_3682816_3714074 Ypestis_Nepal516_893486_924741 13998 T . 17261 1 13996 1 -1 Ypestis_CO92_3682816_3714074 Ypestis_Nepal516_893486_924741 13999 C . 17261 1 13996 1 -1 Ypestis_CO92_3682816_3714074 Ypestis_Nepal516_893486_924741 10748 T C 31691 1181 10748 1 -1 Ypestis_CO92_3714798_3757212 Ypestis_Nepal516_850326_892764 11929 A G 30510 1181 11929 1 -1 Ypestis_CO92_3714798_3757212 Ypestis_Nepal516_850326_892764 18122 A G 24317 6193 18122 1 -1 Ypestis_CO92_3714798_3757212 Ypestis_Nepal516_850326_892764 3653 . A 55188 0 3653 1 -1 Ypestis_CO92_3757394_3816213 Ypestis_Nepal516_791286_850144 3653 . A 55189 0 3653 1 -1 Ypestis_CO92_3757394_3816213 Ypestis_Nepal516_791286_850144 3653 . T 55190 0 3653 1 -1 Ypestis_CO92_3757394_3816213 Ypestis_Nepal516_791286_850144 3653 . A 55191 0 3653 1 -1 Ypestis_CO92_3757394_3816213 Ypestis_Nepal516_791286_850144 3653 . T 55192 0 3653 1 -1 Ypestis_CO92_3757394_3816213 Ypestis_Nepal516_791286_850144 3653 . C 55193 0 3653 1 -1 Ypestis_CO92_3757394_3816213 Ypestis_Nepal516_791286_850144 3653 . G 55194 0 3653 1 -1 Ypestis_CO92_3757394_3816213 Ypestis_Nepal516_791286_850144 3653 . A 55195 0 3653 1 -1 Ypestis_CO92_3757394_3816213 Ypestis_Nepal516_791286_850144 3653 . G 55196 0 3653 1 -1 Ypestis_CO92_3757394_3816213 Ypestis_Nepal516_791286_850144 3653 . G 55197 0 3653 1 -1 Ypestis_CO92_3757394_3816213 Ypestis_Nepal516_791286_850144 3653 . T 55198 0 3653 1 -1 Ypestis_CO92_3757394_3816213 Ypestis_Nepal516_791286_850144 3653 . T 55199 0 3653 1 -1 Ypestis_CO92_3757394_3816213 Ypestis_Nepal516_791286_850144 3653 . G 55200 0 3653 1 -1 Ypestis_CO92_3757394_3816213 Ypestis_Nepal516_791286_850144 3653 . T 55201 0 3653 1 -1 Ypestis_CO92_3757394_3816213 Ypestis_Nepal516_791286_850144 3653 . G 55202 0 3653 1 -1 Ypestis_CO92_3757394_3816213 Ypestis_Nepal516_791286_850144 3653 . T 55203 0 3653 1 -1 Ypestis_CO92_3757394_3816213 Ypestis_Nepal516_791286_850144 3653 . T 55204 0 3653 1 -1 Ypestis_CO92_3757394_3816213 Ypestis_Nepal516_791286_850144 3653 . A 55205 0 3653 1 -1 Ypestis_CO92_3757394_3816213 Ypestis_Nepal516_791286_850144 16409 . C 42423 0 16409 1 -1 Ypestis_CO92_3757394_3816213 Ypestis_Nepal516_791286_850144 16409 . G 42424 0 16409 1 -1 Ypestis_CO92_3757394_3816213 Ypestis_Nepal516_791286_850144 16409 . A 42425 0 16409 1 -1 Ypestis_CO92_3757394_3816213 Ypestis_Nepal516_791286_850144 16409 . C 42426 0 16409 1 -1 Ypestis_CO92_3757394_3816213 Ypestis_Nepal516_791286_850144 16409 . A 42427 0 16409 1 -1 Ypestis_CO92_3757394_3816213 Ypestis_Nepal516_791286_850144 16409 . T 42428 0 16409 1 -1 Ypestis_CO92_3757394_3816213 Ypestis_Nepal516_791286_850144 16409 . C 42429 0 16409 1 -1 Ypestis_CO92_3757394_3816213 Ypestis_Nepal516_791286_850144 16409 . T 42430 0 16409 1 -1 Ypestis_CO92_3757394_3816213 Ypestis_Nepal516_791286_850144 16409 . A 42431 0 16409 1 -1 Ypestis_CO92_3757394_3816213 Ypestis_Nepal516_791286_850144 22644 . A 36171 0 22644 1 -1 Ypestis_CO92_3757394_3816213 Ypestis_Nepal516_791286_850144 22644 . A 36172 0 22644 1 -1 Ypestis_CO92_3757394_3816213 Ypestis_Nepal516_791286_850144 22644 . T 36173 0 22644 1 -1 Ypestis_CO92_3757394_3816213 Ypestis_Nepal516_791286_850144 22644 . T 36174 0 22644 1 -1 Ypestis_CO92_3757394_3816213 Ypestis_Nepal516_791286_850144 22644 . T 36175 0 22644 1 -1 Ypestis_CO92_3757394_3816213 Ypestis_Nepal516_791286_850144 22644 . T 36176 0 22644 1 -1 Ypestis_CO92_3757394_3816213 Ypestis_Nepal516_791286_850144 22644 . G 36177 0 22644 1 -1 Ypestis_CO92_3757394_3816213 Ypestis_Nepal516_791286_850144 22644 . A 36178 0 22644 1 -1 Ypestis_CO92_3757394_3816213 Ypestis_Nepal516_791286_850144 22644 . T 36179 0 22644 1 -1 Ypestis_CO92_3757394_3816213 Ypestis_Nepal516_791286_850144 22644 . T 36180 0 22644 1 -1 Ypestis_CO92_3757394_3816213 Ypestis_Nepal516_791286_850144 22644 . T 36181 0 22644 1 -1 Ypestis_CO92_3757394_3816213 Ypestis_Nepal516_791286_850144 22644 . C 36182 0 22644 1 -1 Ypestis_CO92_3757394_3816213 Ypestis_Nepal516_791286_850144 22644 . G 36183 0 22644 1 -1 Ypestis_CO92_3757394_3816213 Ypestis_Nepal516_791286_850144 22644 . T 36184 0 22644 1 -1 Ypestis_CO92_3757394_3816213 Ypestis_Nepal516_791286_850144 22644 . A 36185 0 22644 1 -1 Ypestis_CO92_3757394_3816213 Ypestis_Nepal516_791286_850144 22644 . G 36186 0 22644 1 -1 Ypestis_CO92_3757394_3816213 Ypestis_Nepal516_791286_850144 22644 . C 36187 0 22644 1 -1 Ypestis_CO92_3757394_3816213 Ypestis_Nepal516_791286_850144 45495 . T 13319 3789 13319 1 -1 Ypestis_CO92_3757394_3816213 Ypestis_Nepal516_791286_850144 49284 C T 9530 3789 9530 1 -1 Ypestis_CO92_3757394_3816213 Ypestis_Nepal516_791286_850144 3657 C T 15247 3654 3654 1 -1 Ypestis_CO92_379513_398416 Ypestis_Nepal516_3747884_3766783 9624 . G 9753 0 9624 1 -1 Ypestis_CO92_3816941_3836317 Ypestis_Nepal516_771161_790548 9624 . G 9754 0 9624 1 -1 Ypestis_CO92_3816941_3836317 Ypestis_Nepal516_771161_790548 9624 . G 9755 0 9624 1 -1 Ypestis_CO92_3816941_3836317 Ypestis_Nepal516_771161_790548 9624 . T 9756 0 9624 1 -1 Ypestis_CO92_3816941_3836317 Ypestis_Nepal516_771161_790548 9624 . T 9757 0 9624 1 -1 Ypestis_CO92_3816941_3836317 Ypestis_Nepal516_771161_790548 9624 . G 9758 0 9624 1 -1 Ypestis_CO92_3816941_3836317 Ypestis_Nepal516_771161_790548 9624 . T 9759 0 9624 1 -1 Ypestis_CO92_3816941_3836317 Ypestis_Nepal516_771161_790548 9624 . A 9760 0 9624 1 -1 Ypestis_CO92_3816941_3836317 Ypestis_Nepal516_771161_790548 9624 . A 9761 0 9624 1 -1 Ypestis_CO92_3816941_3836317 Ypestis_Nepal516_771161_790548 9624 . C 9762 0 9624 1 -1 Ypestis_CO92_3816941_3836317 Ypestis_Nepal516_771161_790548 9624 . C 9763 0 9624 1 -1 Ypestis_CO92_3816941_3836317 Ypestis_Nepal516_771161_790548 9624 . G 9764 0 9624 1 -1 Ypestis_CO92_3816941_3836317 Ypestis_Nepal516_771161_790548 9624 . A 9765 0 9624 1 -1 Ypestis_CO92_3816941_3836317 Ypestis_Nepal516_771161_790548 9624 . T 9766 0 9623 1 -1 Ypestis_CO92_3816941_3836317 Ypestis_Nepal516_771161_790548 9624 . G 9767 0 9622 1 -1 Ypestis_CO92_3816941_3836317 Ypestis_Nepal516_771161_790548 13042 C T 6335 3418 6335 1 -1 Ypestis_CO92_3816941_3836317 Ypestis_Nepal516_771161_790548 10459 C . 28531 5003 10403 1 -1 Ypestis_CO92_3855157_3894147 Ypestis_Nepal516_712976_751908 31683 T C 7308 7308 7308 1 -1 Ypestis_CO92_3855157_3894147 Ypestis_Nepal516_712976_751908 5868 G A 636 636 636 1 -1 Ypestis_CO92_3894321_3900824 Ypestis_Nepal516_706299_712802 4202 . G 4203 0 2520 1 1 Ypestis_CO92_3902283_3909003 Ypestis_Nepal516_3695176_3701920 4202 . C 4204 0 2520 1 1 Ypestis_CO92_3902283_3909003 Ypestis_Nepal516_3695176_3701920 4202 . T 4205 0 2520 1 1 Ypestis_CO92_3902283_3909003 Ypestis_Nepal516_3695176_3701920 4202 . C 4206 0 2520 1 1 Ypestis_CO92_3902283_3909003 Ypestis_Nepal516_3695176_3701920 4202 . T 4207 0 2520 1 1 Ypestis_CO92_3902283_3909003 Ypestis_Nepal516_3695176_3701920 4202 . T 4208 0 2520 1 1 Ypestis_CO92_3902283_3909003 Ypestis_Nepal516_3695176_3701920 4202 . C 4209 0 2520 1 1 Ypestis_CO92_3902283_3909003 Ypestis_Nepal516_3695176_3701920 4202 . C 4210 0 2520 1 1 Ypestis_CO92_3902283_3909003 Ypestis_Nepal516_3695176_3701920 4202 . G 4211 0 2520 1 1 Ypestis_CO92_3902283_3909003 Ypestis_Nepal516_3695176_3701920 4202 . C 4212 0 2520 1 1 Ypestis_CO92_3902283_3909003 Ypestis_Nepal516_3695176_3701920 4202 . T 4213 0 2520 1 1 Ypestis_CO92_3902283_3909003 Ypestis_Nepal516_3695176_3701920 4202 . T 4214 0 2520 1 1 Ypestis_CO92_3902283_3909003 Ypestis_Nepal516_3695176_3701920 4202 . C 4215 0 2520 1 1 Ypestis_CO92_3902283_3909003 Ypestis_Nepal516_3695176_3701920 4202 . A 4216 0 2520 1 1 Ypestis_CO92_3902283_3909003 Ypestis_Nepal516_3695176_3701920 4202 . C 4217 0 2520 1 1 Ypestis_CO92_3902283_3909003 Ypestis_Nepal516_3695176_3701920 4202 . G 4218 0 2520 1 1 Ypestis_CO92_3902283_3909003 Ypestis_Nepal516_3695176_3701920 4202 . C 4219 0 2520 1 1 Ypestis_CO92_3902283_3909003 Ypestis_Nepal516_3695176_3701920 4202 . T 4220 0 2520 1 1 Ypestis_CO92_3902283_3909003 Ypestis_Nepal516_3695176_3701920 4202 . G 4221 0 2520 1 1 Ypestis_CO92_3902283_3909003 Ypestis_Nepal516_3695176_3701920 4202 . T 4222 0 2520 1 1 Ypestis_CO92_3902283_3909003 Ypestis_Nepal516_3695176_3701920 4202 . G 4223 0 2520 1 1 Ypestis_CO92_3902283_3909003 Ypestis_Nepal516_3695176_3701920 4202 . C 4224 0 2520 1 1 Ypestis_CO92_3902283_3909003 Ypestis_Nepal516_3695176_3701920 4202 . C 4225 0 2520 1 1 Ypestis_CO92_3902283_3909003 Ypestis_Nepal516_3695176_3701920 4202 . T 4226 0 2520 1 1 Ypestis_CO92_3902283_3909003 Ypestis_Nepal516_3695176_3701920 803 . A 804 803 803 1 1 Ypestis_CO92_3952336_3955243 Ypestis_Nepal516_3909024_3936763 10697 G A 14018 4113 10697 1 1 Ypestis_CO92_3955769_3980196 Ypestis_Nepal516_3909024_3936763 14810 A . 18130 1 9611 1 1 Ypestis_CO92_3955769_3980196 Ypestis_Nepal516_3909024_3936763 14811 C . 18130 1 9611 1 1 Ypestis_CO92_3955769_3980196 Ypestis_Nepal516_3909024_3936763 14812 C . 18130 1 9611 1 1 Ypestis_CO92_3955769_3980196 Ypestis_Nepal516_3909024_3936763 14813 C . 18130 1 9611 1 1 Ypestis_CO92_3955769_3980196 Ypestis_Nepal516_3909024_3936763 14814 G . 18130 1 9611 1 1 Ypestis_CO92_3955769_3980196 Ypestis_Nepal516_3909024_3936763 14815 T . 18130 1 9611 1 1 Ypestis_CO92_3955769_3980196 Ypestis_Nepal516_3909024_3936763 14816 G . 18130 1 9611 1 1 Ypestis_CO92_3955769_3980196 Ypestis_Nepal516_3909024_3936763 14817 A . 18130 1 9611 1 1 Ypestis_CO92_3955769_3980196 Ypestis_Nepal516_3909024_3936763 14818 A . 18130 1 9611 1 1 Ypestis_CO92_3955769_3980196 Ypestis_Nepal516_3909024_3936763 17978 C T 21290 3160 6451 1 1 Ypestis_CO92_3955769_3980196 Ypestis_Nepal516_3909024_3936763 14242 . A 3252 0 3252 1 -1 Ypestis_CO92_4028209_4045702 Ypestis_Nepal516_4044410_4061918 14242 . A 3253 0 3253 1 -1 Ypestis_CO92_4028209_4045702 Ypestis_Nepal516_4044410_4061918 14242 . C 3254 0 3253 1 -1 Ypestis_CO92_4028209_4045702 Ypestis_Nepal516_4044410_4061918 14242 . T 3255 0 3253 1 -1 Ypestis_CO92_4028209_4045702 Ypestis_Nepal516_4044410_4061918 14242 . T 3256 0 3253 1 -1 Ypestis_CO92_4028209_4045702 Ypestis_Nepal516_4044410_4061918 14242 . C 3257 0 3253 1 -1 Ypestis_CO92_4028209_4045702 Ypestis_Nepal516_4044410_4061918 14242 . T 3258 0 3253 1 -1 Ypestis_CO92_4028209_4045702 Ypestis_Nepal516_4044410_4061918 14242 . A 3259 0 3253 1 -1 Ypestis_CO92_4028209_4045702 Ypestis_Nepal516_4044410_4061918 14242 . C 3260 0 3253 1 -1 Ypestis_CO92_4028209_4045702 Ypestis_Nepal516_4044410_4061918 14242 . T 3261 0 3253 1 -1 Ypestis_CO92_4028209_4045702 Ypestis_Nepal516_4044410_4061918 14242 . A 3262 0 3253 1 -1 Ypestis_CO92_4028209_4045702 Ypestis_Nepal516_4044410_4061918 14242 . C 3263 0 3253 1 -1 Ypestis_CO92_4028209_4045702 Ypestis_Nepal516_4044410_4061918 14242 . C 3264 0 3253 1 -1 Ypestis_CO92_4028209_4045702 Ypestis_Nepal516_4044410_4061918 14242 . G 3265 0 3253 1 -1 Ypestis_CO92_4028209_4045702 Ypestis_Nepal516_4044410_4061918 14242 . A 3266 0 3253 1 -1 Ypestis_CO92_4028209_4045702 Ypestis_Nepal516_4044410_4061918 4581 T C 16955 974 4581 1 -1 Ypestis_CO92_4077982_4099517 Ypestis_Nepal516_3990595_4012130 5555 A G 15981 974 5555 1 -1 Ypestis_CO92_4077982_4099517 Ypestis_Nepal516_3990595_4012130 711 . C 199 0 199 1 -1 Ypestis_CO92_4101464_4102373 Ypestis_Nepal516_3987730_3988648 711 . A 200 0 200 1 -1 Ypestis_CO92_4101464_4102373 Ypestis_Nepal516_3987730_3988648 711 . A 201 0 200 1 -1 Ypestis_CO92_4101464_4102373 Ypestis_Nepal516_3987730_3988648 711 . G 202 0 200 1 -1 Ypestis_CO92_4101464_4102373 Ypestis_Nepal516_3987730_3988648 711 . A 203 0 200 1 -1 Ypestis_CO92_4101464_4102373 Ypestis_Nepal516_3987730_3988648 711 . A 204 0 200 1 -1 Ypestis_CO92_4101464_4102373 Ypestis_Nepal516_3987730_3988648 711 . G 205 0 200 1 -1 Ypestis_CO92_4101464_4102373 Ypestis_Nepal516_3987730_3988648 711 . G 206 0 200 1 -1 Ypestis_CO92_4101464_4102373 Ypestis_Nepal516_3987730_3988648 711 . C 207 0 200 1 -1 Ypestis_CO92_4101464_4102373 Ypestis_Nepal516_3987730_3988648 8210 . T 40084 8104 8210 1 -1 Ypestis_CO92_4104320_4134756 Ypestis_Nepal516_3937489_3985783 16314 G A 31980 8056 14124 1 -1 Ypestis_CO92_4104320_4134756 Ypestis_Nepal516_3937489_3985783 24370 . T 23908 0 6068 1 -1 Ypestis_CO92_4104320_4134756 Ypestis_Nepal516_3937489_3985783 24370 . A 23909 0 6068 1 -1 Ypestis_CO92_4104320_4134756 Ypestis_Nepal516_3937489_3985783 24370 . C 23910 0 6068 1 -1 Ypestis_CO92_4104320_4134756 Ypestis_Nepal516_3937489_3985783 24370 . G 23911 0 6068 1 -1 Ypestis_CO92_4104320_4134756 Ypestis_Nepal516_3937489_3985783 24370 . T 23912 0 6068 1 -1 Ypestis_CO92_4104320_4134756 Ypestis_Nepal516_3937489_3985783 24370 . C 23913 0 6068 1 -1 Ypestis_CO92_4104320_4134756 Ypestis_Nepal516_3937489_3985783 24370 . T 23914 0 6068 1 -1 Ypestis_CO92_4104320_4134756 Ypestis_Nepal516_3937489_3985783 24370 . C 23915 0 6068 1 -1 Ypestis_CO92_4104320_4134756 Ypestis_Nepal516_3937489_3985783 24370 . T 23916 0 6068 1 -1 Ypestis_CO92_4104320_4134756 Ypestis_Nepal516_3937489_3985783 24370 . A 23917 0 6068 1 -1 Ypestis_CO92_4104320_4134756 Ypestis_Nepal516_3937489_3985783 24370 . C 23918 0 6068 1 -1 Ypestis_CO92_4104320_4134756 Ypestis_Nepal516_3937489_3985783 24370 . G 23919 0 6068 1 -1 Ypestis_CO92_4104320_4134756 Ypestis_Nepal516_3937489_3985783 24370 . T 23920 0 6068 1 -1 Ypestis_CO92_4104320_4134756 Ypestis_Nepal516_3937489_3985783 24370 . C 23921 0 6068 1 -1 Ypestis_CO92_4104320_4134756 Ypestis_Nepal516_3937489_3985783 24370 . T 23922 0 6068 1 -1 Ypestis_CO92_4104320_4134756 Ypestis_Nepal516_3937489_3985783 24370 . C 23923 0 6068 1 -1 Ypestis_CO92_4104320_4134756 Ypestis_Nepal516_3937489_3985783 15327 T . 15326 1 9545 1 1 Ypestis_CO92_412199_437075 Ypestis_Nepal516_331407_356276 15328 G . 15326 1 9545 1 1 Ypestis_CO92_412199_437075 Ypestis_Nepal516_331407_356276 15329 T . 15326 1 9545 1 1 Ypestis_CO92_412199_437075 Ypestis_Nepal516_331407_356276 15330 T . 15326 1 9545 1 1 Ypestis_CO92_412199_437075 Ypestis_Nepal516_331407_356276 15331 G . 15326 1 9545 1 1 Ypestis_CO92_412199_437075 Ypestis_Nepal516_331407_356276 15332 G . 15326 1 9545 1 1 Ypestis_CO92_412199_437075 Ypestis_Nepal516_331407_356276 15333 G . 15326 1 9545 1 1 Ypestis_CO92_412199_437075 Ypestis_Nepal516_331407_356276 9791 . G 22069 0 9791 1 -1 Ypestis_CO92_4137900_4169755 Ypestis_Nepal516_22908_54791 9791 . A 22070 0 9791 1 -1 Ypestis_CO92_4137900_4169755 Ypestis_Nepal516_22908_54791 9791 . C 22071 0 9791 1 -1 Ypestis_CO92_4137900_4169755 Ypestis_Nepal516_22908_54791 9791 . C 22072 0 9791 1 -1 Ypestis_CO92_4137900_4169755 Ypestis_Nepal516_22908_54791 9791 . A 22073 0 9791 1 -1 Ypestis_CO92_4137900_4169755 Ypestis_Nepal516_22908_54791 9791 . A 22074 0 9791 1 -1 Ypestis_CO92_4137900_4169755 Ypestis_Nepal516_22908_54791 9791 . T 22075 0 9791 1 -1 Ypestis_CO92_4137900_4169755 Ypestis_Nepal516_22908_54791 9791 . A 22076 0 9791 1 -1 Ypestis_CO92_4137900_4169755 Ypestis_Nepal516_22908_54791 9791 . A 22077 0 9791 1 -1 Ypestis_CO92_4137900_4169755 Ypestis_Nepal516_22908_54791 9791 . T 22078 0 9791 1 -1 Ypestis_CO92_4137900_4169755 Ypestis_Nepal516_22908_54791 9791 . G 22079 0 9791 1 -1 Ypestis_CO92_4137900_4169755 Ypestis_Nepal516_22908_54791 9791 . G 22080 0 9791 1 -1 Ypestis_CO92_4137900_4169755 Ypestis_Nepal516_22908_54791 9791 . A 22081 0 9791 1 -1 Ypestis_CO92_4137900_4169755 Ypestis_Nepal516_22908_54791 9791 . A 22082 0 9791 1 -1 Ypestis_CO92_4137900_4169755 Ypestis_Nepal516_22908_54791 9791 . A 22083 0 9791 1 -1 Ypestis_CO92_4137900_4169755 Ypestis_Nepal516_22908_54791 9791 . T 22084 0 9791 1 -1 Ypestis_CO92_4137900_4169755 Ypestis_Nepal516_22908_54791 9791 . A 22085 0 9791 1 -1 Ypestis_CO92_4137900_4169755 Ypestis_Nepal516_22908_54791 9791 . A 22086 0 9791 1 -1 Ypestis_CO92_4137900_4169755 Ypestis_Nepal516_22908_54791 9791 . T 22087 0 9791 1 -1 Ypestis_CO92_4137900_4169755 Ypestis_Nepal516_22908_54791 9791 . G 22088 0 9791 1 -1 Ypestis_CO92_4137900_4169755 Ypestis_Nepal516_22908_54791 9791 . C 22089 0 9791 1 -1 Ypestis_CO92_4137900_4169755 Ypestis_Nepal516_22908_54791 9791 . G 22090 0 9791 1 -1 Ypestis_CO92_4137900_4169755 Ypestis_Nepal516_22908_54791 9791 . A 22091 0 9791 1 -1 Ypestis_CO92_4137900_4169755 Ypestis_Nepal516_22908_54791 9791 . C 22092 0 9791 1 -1 Ypestis_CO92_4137900_4169755 Ypestis_Nepal516_22908_54791 9791 . T 22093 0 9791 1 -1 Ypestis_CO92_4137900_4169755 Ypestis_Nepal516_22908_54791 9791 . G 22094 0 9791 1 -1 Ypestis_CO92_4137900_4169755 Ypestis_Nepal516_22908_54791 18665 . C 13191 0 13191 1 -1 Ypestis_CO92_4137900_4169755 Ypestis_Nepal516_22908_54791 18665 . C 13192 0 13192 1 -1 Ypestis_CO92_4137900_4169755 Ypestis_Nepal516_22908_54791 18665 . C 13193 0 13192 1 -1 Ypestis_CO92_4137900_4169755 Ypestis_Nepal516_22908_54791 18665 . C 13194 0 13192 1 -1 Ypestis_CO92_4137900_4169755 Ypestis_Nepal516_22908_54791 3184 A . 2143 38 2143 1 -1 Ypestis_CO92_4169928_4175255 Ypestis_Nepal516_17409_22735 3222 A C 2106 38 2106 1 -1 Ypestis_CO92_4169928_4175255 Ypestis_Nepal516_17409_22735 13926 G A 1923 1923 1923 1 -1 Ypestis_CO92_4180675_4196523 Ypestis_Nepal516_277177_292872 12718 . A 1421 2 1421 1 -1 Ypestis_CO92_4197250_4211388 Ypestis_Nepal516_262311_276450 12720 T A 1419 2 1419 1 -1 Ypestis_CO92_4197250_4211388 Ypestis_Nepal516_262311_276450 5069 A T 32462 5069 5069 1 -1 Ypestis_CO92_4238755_4276305 Ypestis_Nepal516_197413_234951 17852 . C 19678 11724 17852 1 -1 Ypestis_CO92_4238755_4276305 Ypestis_Nepal516_197413_234951 29576 A C 7954 21 7954 1 -1 Ypestis_CO92_4238755_4276305 Ypestis_Nepal516_197413_234951 29597 C . 7933 1 7933 1 -1 Ypestis_CO92_4238755_4276305 Ypestis_Nepal516_197413_234951 29598 G . 7933 1 7933 1 -1 Ypestis_CO92_4238755_4276305 Ypestis_Nepal516_197413_234951 29599 T . 7933 1 7933 1 -1 Ypestis_CO92_4238755_4276305 Ypestis_Nepal516_197413_234951 29600 T . 7933 1 7933 1 -1 Ypestis_CO92_4238755_4276305 Ypestis_Nepal516_197413_234951 29601 A . 7933 1 7933 1 -1 Ypestis_CO92_4238755_4276305 Ypestis_Nepal516_197413_234951 29603 T . 7932 1 7932 1 -1 Ypestis_CO92_4238755_4276305 Ypestis_Nepal516_197413_234951 29604 C . 7932 1 7932 1 -1 Ypestis_CO92_4238755_4276305 Ypestis_Nepal516_197413_234951 29611 C . 7926 1 7926 1 -1 Ypestis_CO92_4238755_4276305 Ypestis_Nepal516_197413_234951 29612 G . 7926 1 7926 1 -1 Ypestis_CO92_4238755_4276305 Ypestis_Nepal516_197413_234951 29613 T . 7926 1 7926 1 -1 Ypestis_CO92_4238755_4276305 Ypestis_Nepal516_197413_234951 29614 T . 7926 1 7926 1 -1 Ypestis_CO92_4238755_4276305 Ypestis_Nepal516_197413_234951 29615 A . 7926 1 7926 1 -1 Ypestis_CO92_4238755_4276305 Ypestis_Nepal516_197413_234951 29617 T . 7925 1 7925 1 -1 Ypestis_CO92_4238755_4276305 Ypestis_Nepal516_197413_234951 29618 C . 7925 1 7925 1 -1 Ypestis_CO92_4238755_4276305 Ypestis_Nepal516_197413_234951 29625 C . 7919 1 7919 1 -1 Ypestis_CO92_4238755_4276305 Ypestis_Nepal516_197413_234951 29626 G . 7919 1 7919 1 -1 Ypestis_CO92_4238755_4276305 Ypestis_Nepal516_197413_234951 29627 T . 7919 1 7919 1 -1 Ypestis_CO92_4238755_4276305 Ypestis_Nepal516_197413_234951 29628 T . 7919 1 7919 1 -1 Ypestis_CO92_4238755_4276305 Ypestis_Nepal516_197413_234951 29629 A . 7919 1 7919 1 -1 Ypestis_CO92_4238755_4276305 Ypestis_Nepal516_197413_234951 29631 T . 7918 1 7918 1 -1 Ypestis_CO92_4238755_4276305 Ypestis_Nepal516_197413_234951 29632 C . 7918 1 7918 1 -1 Ypestis_CO92_4238755_4276305 Ypestis_Nepal516_197413_234951 3828 C . 35538 1 3828 1 -1 Ypestis_CO92_4277050_4316409 Ypestis_Nepal516_157303_196668 3829 T . 35538 1 3829 1 -1 Ypestis_CO92_4277050_4316409 Ypestis_Nepal516_157303_196668 3830 T . 35538 1 3829 1 -1 Ypestis_CO92_4277050_4316409 Ypestis_Nepal516_157303_196668 3831 C . 35538 1 3829 1 -1 Ypestis_CO92_4277050_4316409 Ypestis_Nepal516_157303_196668 3832 A . 35538 1 3829 1 -1 Ypestis_CO92_4277050_4316409 Ypestis_Nepal516_157303_196668 3833 A . 35538 1 3829 1 -1 Ypestis_CO92_4277050_4316409 Ypestis_Nepal516_157303_196668 3834 C . 35538 1 3829 1 -1 Ypestis_CO92_4277050_4316409 Ypestis_Nepal516_157303_196668 3835 T . 35538 1 3829 1 -1 Ypestis_CO92_4277050_4316409 Ypestis_Nepal516_157303_196668 3836 T . 35538 1 3829 1 -1 Ypestis_CO92_4277050_4316409 Ypestis_Nepal516_157303_196668 3837 C . 35538 1 3829 1 -1 Ypestis_CO92_4277050_4316409 Ypestis_Nepal516_157303_196668 3838 T . 35538 1 3829 1 -1 Ypestis_CO92_4277050_4316409 Ypestis_Nepal516_157303_196668 3839 T . 35538 1 3829 1 -1 Ypestis_CO92_4277050_4316409 Ypestis_Nepal516_157303_196668 3840 C . 35538 1 3829 1 -1 Ypestis_CO92_4277050_4316409 Ypestis_Nepal516_157303_196668 3841 A . 35538 1 3829 1 -1 Ypestis_CO92_4277050_4316409 Ypestis_Nepal516_157303_196668 3842 A . 35538 1 3829 1 -1 Ypestis_CO92_4277050_4316409 Ypestis_Nepal516_157303_196668 3843 C . 35538 1 3829 1 -1 Ypestis_CO92_4277050_4316409 Ypestis_Nepal516_157303_196668 3844 T . 35538 1 3829 1 -1 Ypestis_CO92_4277050_4316409 Ypestis_Nepal516_157303_196668 3845 T . 35538 1 3829 1 -1 Ypestis_CO92_4277050_4316409 Ypestis_Nepal516_157303_196668 34869 C T 4491 4491 4491 1 -1 Ypestis_CO92_4277050_4316409 Ypestis_Nepal516_157303_196668 442 G A 258 258 258 1 -1 Ypestis_CO92_4324540_4325239 Ypestis_Nepal516_148473_149175 20020 . T 4957 4957 4957 1 -1 Ypestis_CO92_4325485_4350461 Ypestis_Nepal516_123250_148227 3888 A G 12534 3888 3888 1 -1 Ypestis_CO92_4367999_4384420 Ypestis_Nepal516_89332_105753 9192 T A 7230 5304 7230 1 -1 Ypestis_CO92_4367999_4384420 Ypestis_Nepal516_89332_105753 3414 C T 3414 1784 3414 1 1 Ypestis_CO92_437242_447361 Ypestis_Nepal516_356443_366562 5198 T C 5198 1234 4923 1 1 Ypestis_CO92_437242_447361 Ypestis_Nepal516_356443_366562 6432 G T 6432 1234 3689 1 1 Ypestis_CO92_437242_447361 Ypestis_Nepal516_356443_366562 2435 T C 2543 56 2435 1 1 Ypestis_CO92_4419199_4468358 Ypestis_Nepal516_4090815_4143853 2491 A G 2599 56 2491 1 1 Ypestis_CO92_4419199_4468358 Ypestis_Nepal516_4090815_4143853 6205 C T 6313 2 6205 1 1 Ypestis_CO92_4419199_4468358 Ypestis_Nepal516_4090815_4143853 6207 C T 6315 2 6207 1 1 Ypestis_CO92_4419199_4468358 Ypestis_Nepal516_4090815_4143853 6212 A G 6320 5 6212 1 1 Ypestis_CO92_4419199_4468358 Ypestis_Nepal516_4090815_4143853 23819 G A 27698 2737 23819 1 1 Ypestis_CO92_4419199_4468358 Ypestis_Nepal516_4090815_4143853 41526 . C 41521 7048 7048 1 1 Ypestis_CO92_4469105_4517677 Ypestis_Nepal516_4144600_4193167 639 G A 639 639 639 1 1 Ypestis_CO92_4517763_4520040 Ypestis_Nepal516_4193253_4195531 5480 A G 5480 5480 5480 1 1 Ypestis_CO92_4522004_4563974 Ypestis_Nepal516_4197494_4239553 20639 A G 20639 304 20639 1 1 Ypestis_CO92_4522004_4563974 Ypestis_Nepal516_4197494_4239553 41758 T . 41853 1 208 1 1 Ypestis_CO92_4522004_4563974 Ypestis_Nepal516_4197494_4239553 41759 T . 41853 1 208 1 1 Ypestis_CO92_4522004_4563974 Ypestis_Nepal516_4197494_4239553 41760 A . 41853 1 208 1 1 Ypestis_CO92_4522004_4563974 Ypestis_Nepal516_4197494_4239553 41761 T . 41853 1 208 1 1 Ypestis_CO92_4522004_4563974 Ypestis_Nepal516_4197494_4239553 41762 C . 41853 1 208 1 1 Ypestis_CO92_4522004_4563974 Ypestis_Nepal516_4197494_4239553 41763 T . 41853 1 208 1 1 Ypestis_CO92_4522004_4563974 Ypestis_Nepal516_4197494_4239553 41764 G . 41853 1 208 1 1 Ypestis_CO92_4522004_4563974 Ypestis_Nepal516_4197494_4239553 1667 . T 1668 0 1667 1 1 Ypestis_CO92_455256_509599 Ypestis_Nepal516_374457_428802 1667 . G 1669 0 1667 1 1 Ypestis_CO92_455256_509599 Ypestis_Nepal516_374457_428802 1667 . A 1670 0 1667 1 1 Ypestis_CO92_455256_509599 Ypestis_Nepal516_374457_428802 1667 . T 1671 0 1667 1 1 Ypestis_CO92_455256_509599 Ypestis_Nepal516_374457_428802 1667 . T 1672 0 1667 1 1 Ypestis_CO92_455256_509599 Ypestis_Nepal516_374457_428802 1667 . G 1673 0 1667 1 1 Ypestis_CO92_455256_509599 Ypestis_Nepal516_374457_428802 1667 . G 1674 0 1667 1 1 Ypestis_CO92_455256_509599 Ypestis_Nepal516_374457_428802 1667 . T 1675 0 1667 1 1 Ypestis_CO92_455256_509599 Ypestis_Nepal516_374457_428802 16448 T . 16455 1 16448 1 1 Ypestis_CO92_455256_509599 Ypestis_Nepal516_374457_428802 16449 A . 16455 1 16449 1 1 Ypestis_CO92_455256_509599 Ypestis_Nepal516_374457_428802 16450 G . 16455 1 16450 1 1 Ypestis_CO92_455256_509599 Ypestis_Nepal516_374457_428802 16451 A . 16455 1 16451 1 1 Ypestis_CO92_455256_509599 Ypestis_Nepal516_374457_428802 16452 T . 16455 1 16452 1 1 Ypestis_CO92_455256_509599 Ypestis_Nepal516_374457_428802 16453 T . 16455 1 16453 1 1 Ypestis_CO92_455256_509599 Ypestis_Nepal516_374457_428802 16454 G . 16455 1 16454 1 1 Ypestis_CO92_455256_509599 Ypestis_Nepal516_374457_428802 16455 G . 16455 1 16455 1 1 Ypestis_CO92_455256_509599 Ypestis_Nepal516_374457_428802 16456 T . 16455 1 16455 1 1 Ypestis_CO92_455256_509599 Ypestis_Nepal516_374457_428802 16457 T . 16455 1 16455 1 1 Ypestis_CO92_455256_509599 Ypestis_Nepal516_374457_428802 16458 T . 16455 1 16455 1 1 Ypestis_CO92_455256_509599 Ypestis_Nepal516_374457_428802 16459 T . 16455 1 16455 1 1 Ypestis_CO92_455256_509599 Ypestis_Nepal516_374457_428802 16460 T . 16455 1 16455 1 1 Ypestis_CO92_455256_509599 Ypestis_Nepal516_374457_428802 16461 T . 16455 1 16455 1 1 Ypestis_CO92_455256_509599 Ypestis_Nepal516_374457_428802 16462 A . 16455 1 16455 1 1 Ypestis_CO92_455256_509599 Ypestis_Nepal516_374457_428802 16463 T . 16455 1 16455 1 1 Ypestis_CO92_455256_509599 Ypestis_Nepal516_374457_428802 16464 C . 16455 1 16455 1 1 Ypestis_CO92_455256_509599 Ypestis_Nepal516_374457_428802 16465 G . 16455 1 16455 1 1 Ypestis_CO92_455256_509599 Ypestis_Nepal516_374457_428802 16466 T . 16455 1 16455 1 1 Ypestis_CO92_455256_509599 Ypestis_Nepal516_374457_428802 16467 G . 16455 1 16455 1 1 Ypestis_CO92_455256_509599 Ypestis_Nepal516_374457_428802 16468 T . 16455 1 16455 1 1 Ypestis_CO92_455256_509599 Ypestis_Nepal516_374457_428802 16469 T . 16455 1 16455 1 1 Ypestis_CO92_455256_509599 Ypestis_Nepal516_374457_428802 16470 C . 16455 1 16455 1 1 Ypestis_CO92_455256_509599 Ypestis_Nepal516_374457_428802 16471 A . 16455 1 16455 1 1 Ypestis_CO92_455256_509599 Ypestis_Nepal516_374457_428802 22689 . C 22674 0 22674 1 1 Ypestis_CO92_455256_509599 Ypestis_Nepal516_374457_428802 22689 . T 22675 0 22675 1 1 Ypestis_CO92_455256_509599 Ypestis_Nepal516_374457_428802 22689 . A 22676 0 22676 1 1 Ypestis_CO92_455256_509599 Ypestis_Nepal516_374457_428802 22689 . T 22677 0 22677 1 1 Ypestis_CO92_455256_509599 Ypestis_Nepal516_374457_428802 22689 . T 22678 0 22678 1 1 Ypestis_CO92_455256_509599 Ypestis_Nepal516_374457_428802 22689 . G 22679 0 22679 1 1 Ypestis_CO92_455256_509599 Ypestis_Nepal516_374457_428802 22689 . T 22680 0 22680 1 1 Ypestis_CO92_455256_509599 Ypestis_Nepal516_374457_428802 22689 . T 22681 0 22681 1 1 Ypestis_CO92_455256_509599 Ypestis_Nepal516_374457_428802 22689 . T 22682 0 22682 1 1 Ypestis_CO92_455256_509599 Ypestis_Nepal516_374457_428802 22689 . T 22683 0 22683 1 1 Ypestis_CO92_455256_509599 Ypestis_Nepal516_374457_428802 22689 . G 22684 0 22684 1 1 Ypestis_CO92_455256_509599 Ypestis_Nepal516_374457_428802 22689 . A 22685 0 22685 1 1 Ypestis_CO92_455256_509599 Ypestis_Nepal516_374457_428802 22689 . T 22686 0 22686 1 1 Ypestis_CO92_455256_509599 Ypestis_Nepal516_374457_428802 22689 . C 22687 0 22687 1 1 Ypestis_CO92_455256_509599 Ypestis_Nepal516_374457_428802 22689 . G 22688 0 22688 1 1 Ypestis_CO92_455256_509599 Ypestis_Nepal516_374457_428802 22689 . A 22689 0 22689 1 1 Ypestis_CO92_455256_509599 Ypestis_Nepal516_374457_428802 22689 . T 22690 0 22689 1 1 Ypestis_CO92_455256_509599 Ypestis_Nepal516_374457_428802 22689 . A 22691 0 22689 1 1 Ypestis_CO92_455256_509599 Ypestis_Nepal516_374457_428802 22689 . C 22692 0 22689 1 1 Ypestis_CO92_455256_509599 Ypestis_Nepal516_374457_428802 40970 T . 40972 13375 13375 1 1 Ypestis_CO92_455256_509599 Ypestis_Nepal516_374457_428802 5584 C . 5583 5584 5583 1 1 Ypestis_CO92_4565717_4589822 Ypestis_Nepal516_4241296_4265400 13467 A G 13466 7883 10640 1 1 Ypestis_CO92_4565717_4589822 Ypestis_Nepal516_4241296_4265400 3828 C T 3828 3608 3828 1 1 Ypestis_CO92_4591174_4610627 Ypestis_Nepal516_4266752_4286205 7436 G A 7436 3608 7436 1 1 Ypestis_CO92_4591174_4610627 Ypestis_Nepal516_4266752_4286205 14663 G A 14663 4792 4792 1 1 Ypestis_CO92_4591174_4610627 Ypestis_Nepal516_4266752_4286205 11735 C G 11812 5105 5105 1 1 Ypestis_CO92_4612401_4629239 Ypestis_Nepal516_4493186_4510101 4877 A G 4877 4877 4877 1 1 Ypestis_CO92_4629411_4653729 Ypestis_Nepal516_4510273_4534591 14256 G C 42591 12854 14256 1 -1 Ypestis_CO92_47430_103336 Ypestis_Nepal516_4309522_4366368 27110 C T 29737 12854 27110 1 -1 Ypestis_CO92_47430_103336 Ypestis_Nepal516_4309522_4366368 49797 G A 7050 3046 6111 1 -1 Ypestis_CO92_47430_103336 Ypestis_Nepal516_4309522_4366368 25117 T C 25117 7437 11242 1 1 Ypestis_CO92_520372_556729 Ypestis_Nepal516_439575_475933 32554 . G 32555 3805 3805 1 1 Ypestis_CO92_520372_556729 Ypestis_Nepal516_439575_475933 2288 . A 2289 0 2288 1 1 Ypestis_CO92_579111_586290 Ypestis_Nepal516_496356_503574 2288 . C 2290 0 2288 1 1 Ypestis_CO92_579111_586290 Ypestis_Nepal516_496356_503574 2288 . T 2291 0 2288 1 1 Ypestis_CO92_579111_586290 Ypestis_Nepal516_496356_503574 2288 . G 2292 0 2288 1 1 Ypestis_CO92_579111_586290 Ypestis_Nepal516_496356_503574 2288 . A 2293 0 2288 1 1 Ypestis_CO92_579111_586290 Ypestis_Nepal516_496356_503574 2288 . T 2294 0 2288 1 1 Ypestis_CO92_579111_586290 Ypestis_Nepal516_496356_503574 2288 . T 2295 0 2288 1 1 Ypestis_CO92_579111_586290 Ypestis_Nepal516_496356_503574 2288 . G 2296 0 2288 1 1 Ypestis_CO92_579111_586290 Ypestis_Nepal516_496356_503574 2288 . T 2297 0 2288 1 1 Ypestis_CO92_579111_586290 Ypestis_Nepal516_496356_503574 2288 . T 2298 0 2288 1 1 Ypestis_CO92_579111_586290 Ypestis_Nepal516_496356_503574 2288 . T 2299 0 2288 1 1 Ypestis_CO92_579111_586290 Ypestis_Nepal516_496356_503574 2288 . T 2300 0 2288 1 1 Ypestis_CO92_579111_586290 Ypestis_Nepal516_496356_503574 2288 . T 2301 0 2288 1 1 Ypestis_CO92_579111_586290 Ypestis_Nepal516_496356_503574 2288 . C 2302 0 2288 1 1 Ypestis_CO92_579111_586290 Ypestis_Nepal516_496356_503574 2288 . G 2303 0 2288 1 1 Ypestis_CO92_579111_586290 Ypestis_Nepal516_496356_503574 2288 . G 2304 0 2288 1 1 Ypestis_CO92_579111_586290 Ypestis_Nepal516_496356_503574 2288 . A 2305 0 2288 1 1 Ypestis_CO92_579111_586290 Ypestis_Nepal516_496356_503574 2299 . T 2317 0 2299 1 1 Ypestis_CO92_579111_586290 Ypestis_Nepal516_496356_503574 2299 . T 2318 0 2299 1 1 Ypestis_CO92_579111_586290 Ypestis_Nepal516_496356_503574 2299 . C 2319 0 2299 1 1 Ypestis_CO92_579111_586290 Ypestis_Nepal516_496356_503574 2299 . G 2320 0 2299 1 1 Ypestis_CO92_579111_586290 Ypestis_Nepal516_496356_503574 2299 . G 2321 0 2299 1 1 Ypestis_CO92_579111_586290 Ypestis_Nepal516_496356_503574 2299 . A 2322 0 2299 1 1 Ypestis_CO92_579111_586290 Ypestis_Nepal516_496356_503574 2299 . A 2323 0 2299 1 1 Ypestis_CO92_579111_586290 Ypestis_Nepal516_496356_503574 2299 . C 2324 0 2299 1 1 Ypestis_CO92_579111_586290 Ypestis_Nepal516_496356_503574 2299 . T 2325 0 2299 1 1 Ypestis_CO92_579111_586290 Ypestis_Nepal516_496356_503574 2299 . G 2326 0 2299 1 1 Ypestis_CO92_579111_586290 Ypestis_Nepal516_496356_503574 2300 . T 2328 0 2300 1 1 Ypestis_CO92_579111_586290 Ypestis_Nepal516_496356_503574 2300 . T 2329 0 2300 1 1 Ypestis_CO92_579111_586290 Ypestis_Nepal516_496356_503574 2300 . G 2330 0 2300 1 1 Ypestis_CO92_579111_586290 Ypestis_Nepal516_496356_503574 2300 . T 2331 0 2300 1 1 Ypestis_CO92_579111_586290 Ypestis_Nepal516_496356_503574 2300 . T 2332 0 2300 1 1 Ypestis_CO92_579111_586290 Ypestis_Nepal516_496356_503574 2300 . T 2333 0 2300 1 1 Ypestis_CO92_579111_586290 Ypestis_Nepal516_496356_503574 2300 . T 2334 0 2300 1 1 Ypestis_CO92_579111_586290 Ypestis_Nepal516_496356_503574 2304 A G 2338 4 2304 1 1 Ypestis_CO92_579111_586290 Ypestis_Nepal516_496356_503574 2424 . T 2459 0 2424 1 1 Ypestis_CO92_579111_586290 Ypestis_Nepal516_496356_503574 2424 . T 2460 0 2424 1 1 Ypestis_CO92_579111_586290 Ypestis_Nepal516_496356_503574 2424 . C 2461 0 2424 1 1 Ypestis_CO92_579111_586290 Ypestis_Nepal516_496356_503574 2424 . A 2462 0 2424 1 1 Ypestis_CO92_579111_586290 Ypestis_Nepal516_496356_503574 2424 . A 2463 0 2424 1 1 Ypestis_CO92_579111_586290 Ypestis_Nepal516_496356_503574 3792 G T 3792 3792 3792 1 1 Ypestis_CO92_589517_612128 Ypestis_Nepal516_506801_529412 9576 T A 35999 1 9576 1 1 Ypestis_CO92_661265_693710 Ypestis_Nepal516_546376_605181 9577 C T 36000 1 9577 1 1 Ypestis_CO92_661265_693710 Ypestis_Nepal516_546376_605181 10284 A G 36707 707 10284 1 1 Ypestis_CO92_661265_693710 Ypestis_Nepal516_546376_605181 22834 T . 49256 1 9551 1 1 Ypestis_CO92_661265_693710 Ypestis_Nepal516_546376_605181 22835 G . 49256 1 9551 1 1 Ypestis_CO92_661265_693710 Ypestis_Nepal516_546376_605181 22836 A . 49256 1 9551 1 1 Ypestis_CO92_661265_693710 Ypestis_Nepal516_546376_605181 22837 T . 49256 1 9551 1 1 Ypestis_CO92_661265_693710 Ypestis_Nepal516_546376_605181 1299 A G 1299 153 1299 1 1 Ypestis_CO92_698196_716957 Ypestis_Nepal516_607767_626528 1452 T C 1452 153 1452 1 1 Ypestis_CO92_698196_716957 Ypestis_Nepal516_607767_626528 12714 C T 12714 6049 6049 1 1 Ypestis_CO92_698196_716957 Ypestis_Nepal516_607767_626528 1668 A . 1667 1 1161 1 1 Ypestis_CO92_717138_719998 Ypestis_Nepal516_626709_629535 1669 A . 1667 1 1161 1 1 Ypestis_CO92_717138_719998 Ypestis_Nepal516_626709_629535 1670 T . 1667 1 1161 1 1 Ypestis_CO92_717138_719998 Ypestis_Nepal516_626709_629535 1671 A . 1667 1 1161 1 1 Ypestis_CO92_717138_719998 Ypestis_Nepal516_626709_629535 1672 T . 1667 1 1161 1 1 Ypestis_CO92_717138_719998 Ypestis_Nepal516_626709_629535 1673 C . 1667 1 1161 1 1 Ypestis_CO92_717138_719998 Ypestis_Nepal516_626709_629535 1674 A . 1667 1 1161 1 1 Ypestis_CO92_717138_719998 Ypestis_Nepal516_626709_629535 1675 T . 1667 1 1161 1 1 Ypestis_CO92_717138_719998 Ypestis_Nepal516_626709_629535 1676 A . 1667 1 1161 1 1 Ypestis_CO92_717138_719998 Ypestis_Nepal516_626709_629535 1677 G . 1667 1 1161 1 1 Ypestis_CO92_717138_719998 Ypestis_Nepal516_626709_629535 1678 G . 1667 1 1161 1 1 Ypestis_CO92_717138_719998 Ypestis_Nepal516_626709_629535 1679 C . 1667 1 1161 1 1 Ypestis_CO92_717138_719998 Ypestis_Nepal516_626709_629535 1680 T . 1667 1 1161 1 1 Ypestis_CO92_717138_719998 Ypestis_Nepal516_626709_629535 1681 T . 1667 1 1161 1 1 Ypestis_CO92_717138_719998 Ypestis_Nepal516_626709_629535 1682 G . 1667 1 1161 1 1 Ypestis_CO92_717138_719998 Ypestis_Nepal516_626709_629535 1683 T . 1667 1 1161 1 1 Ypestis_CO92_717138_719998 Ypestis_Nepal516_626709_629535 1684 T . 1667 1 1161 1 1 Ypestis_CO92_717138_719998 Ypestis_Nepal516_626709_629535 1685 A . 1667 1 1161 1 1 Ypestis_CO92_717138_719998 Ypestis_Nepal516_626709_629535 1686 A . 1667 1 1161 1 1 Ypestis_CO92_717138_719998 Ypestis_Nepal516_626709_629535 1687 T . 1667 1 1161 1 1 Ypestis_CO92_717138_719998 Ypestis_Nepal516_626709_629535 1688 A . 1667 1 1161 1 1 Ypestis_CO92_717138_719998 Ypestis_Nepal516_626709_629535 1689 T . 1667 1 1161 1 1 Ypestis_CO92_717138_719998 Ypestis_Nepal516_626709_629535 1690 T . 1667 1 1161 1 1 Ypestis_CO92_717138_719998 Ypestis_Nepal516_626709_629535 1691 G . 1667 1 1161 1 1 Ypestis_CO92_717138_719998 Ypestis_Nepal516_626709_629535 1692 C . 1667 1 1161 1 1 Ypestis_CO92_717138_719998 Ypestis_Nepal516_626709_629535 1693 T . 1667 1 1161 1 1 Ypestis_CO92_717138_719998 Ypestis_Nepal516_626709_629535 1694 G . 1667 1 1161 1 1 Ypestis_CO92_717138_719998 Ypestis_Nepal516_626709_629535 1695 G . 1667 1 1161 1 1 Ypestis_CO92_717138_719998 Ypestis_Nepal516_626709_629535 1696 C . 1667 1 1161 1 1 Ypestis_CO92_717138_719998 Ypestis_Nepal516_626709_629535 1697 T . 1667 1 1161 1 1 Ypestis_CO92_717138_719998 Ypestis_Nepal516_626709_629535 1698 G . 1667 1 1161 1 1 Ypestis_CO92_717138_719998 Ypestis_Nepal516_626709_629535 1699 G . 1667 1 1161 1 1 Ypestis_CO92_717138_719998 Ypestis_Nepal516_626709_629535 1700 T . 1667 1 1161 1 1 Ypestis_CO92_717138_719998 Ypestis_Nepal516_626709_629535 1701 T . 1667 1 1161 1 1 Ypestis_CO92_717138_719998 Ypestis_Nepal516_626709_629535 27565 . G 27566 5247 8818 1 1 Ypestis_CO92_720367_756750 Ypestis_Nepal516_629904_666286 32812 T . 32812 3572 3572 1 1 Ypestis_CO92_720367_756750 Ypestis_Nepal516_629904_666286 1600 G T 1600 1600 1600 1 1 Ypestis_CO92_758198_785293 Ypestis_Nepal516_667025_704848 14913 T C 14949 6474 12184 1 1 Ypestis_CO92_758198_785293 Ypestis_Nepal516_667025_704848 10059 . A 37263 0 203 1 1 Ypestis_CO92_786022_796282 Ypestis_Nepal516_667025_704848 10059 . G 37264 0 203 1 1 Ypestis_CO92_786022_796282 Ypestis_Nepal516_667025_704848 10059 . G 37265 0 203 1 1 Ypestis_CO92_786022_796282 Ypestis_Nepal516_667025_704848 10059 . G 37266 0 203 1 1 Ypestis_CO92_786022_796282 Ypestis_Nepal516_667025_704848 10059 . G 37267 0 203 1 1 Ypestis_CO92_786022_796282 Ypestis_Nepal516_667025_704848 10059 . G 37268 0 203 1 1 Ypestis_CO92_786022_796282 Ypestis_Nepal516_667025_704848 10059 . G 37269 0 203 1 1 Ypestis_CO92_786022_796282 Ypestis_Nepal516_667025_704848 10059 . T 37270 0 203 1 1 Ypestis_CO92_786022_796282 Ypestis_Nepal516_667025_704848 10059 . A 37271 0 203 1 1 Ypestis_CO92_786022_796282 Ypestis_Nepal516_667025_704848 2745 . C 2746 0 2745 1 1 Ypestis_CO92_811233_856928 Ypestis_Nepal516_3604885_3618718 2745 . C 2747 0 2745 1 1 Ypestis_CO92_811233_856928 Ypestis_Nepal516_3604885_3618718 2745 . T 2748 0 2745 1 1 Ypestis_CO92_811233_856928 Ypestis_Nepal516_3604885_3618718 2745 . G 2749 0 2745 1 1 Ypestis_CO92_811233_856928 Ypestis_Nepal516_3604885_3618718 2745 . G 2750 0 2745 1 1 Ypestis_CO92_811233_856928 Ypestis_Nepal516_3604885_3618718 2745 . C 2751 0 2745 1 1 Ypestis_CO92_811233_856928 Ypestis_Nepal516_3604885_3618718 2745 . C 2752 0 2745 1 1 Ypestis_CO92_811233_856928 Ypestis_Nepal516_3604885_3618718 2745 . A 2753 0 2745 1 1 Ypestis_CO92_811233_856928 Ypestis_Nepal516_3604885_3618718 2745 . T 2754 0 2745 1 1 Ypestis_CO92_811233_856928 Ypestis_Nepal516_3604885_3618718 5495 . A 5505 0 5495 1 1 Ypestis_CO92_811233_856928 Ypestis_Nepal516_3604885_3618718 5495 . T 5506 0 5495 1 1 Ypestis_CO92_811233_856928 Ypestis_Nepal516_3604885_3618718 5495 . A 5507 0 5495 1 1 Ypestis_CO92_811233_856928 Ypestis_Nepal516_3604885_3618718 5495 . A 5508 0 5495 1 1 Ypestis_CO92_811233_856928 Ypestis_Nepal516_3604885_3618718 5495 . T 5509 0 5495 1 1 Ypestis_CO92_811233_856928 Ypestis_Nepal516_3604885_3618718 5495 . T 5510 0 5495 1 1 Ypestis_CO92_811233_856928 Ypestis_Nepal516_3604885_3618718 5495 . T 5511 0 5495 1 1 Ypestis_CO92_811233_856928 Ypestis_Nepal516_3604885_3618718 5495 . A 5512 0 5495 1 1 Ypestis_CO92_811233_856928 Ypestis_Nepal516_3604885_3618718 5495 . A 5513 0 5495 1 1 Ypestis_CO92_811233_856928 Ypestis_Nepal516_3604885_3618718 5495 . T 5514 0 5495 1 1 Ypestis_CO92_811233_856928 Ypestis_Nepal516_3604885_3618718 5495 . A 5515 0 5495 1 1 Ypestis_CO92_811233_856928 Ypestis_Nepal516_3604885_3618718 5495 . A 5516 0 5495 1 1 Ypestis_CO92_811233_856928 Ypestis_Nepal516_3604885_3618718 5495 . T 5517 0 5495 1 1 Ypestis_CO92_811233_856928 Ypestis_Nepal516_3604885_3618718 5495 . T 5518 0 5495 1 1 Ypestis_CO92_811233_856928 Ypestis_Nepal516_3604885_3618718 5495 . T 5519 0 5495 1 1 Ypestis_CO92_811233_856928 Ypestis_Nepal516_3604885_3618718 5495 . A 5520 0 5495 1 1 Ypestis_CO92_811233_856928 Ypestis_Nepal516_3604885_3618718 30845 C . 14612 1 14612 1 1 Ypestis_CO92_811233_856928 Ypestis_Nepal516_3625304_3654736 30846 C . 14612 1 14612 1 1 Ypestis_CO92_811233_856928 Ypestis_Nepal516_3625304_3654736 30847 C . 14612 1 14612 1 1 Ypestis_CO92_811233_856928 Ypestis_Nepal516_3625304_3654736 30848 C . 14612 1 14612 1 1 Ypestis_CO92_811233_856928 Ypestis_Nepal516_3625304_3654736 30849 C . 14612 1 14612 1 1 Ypestis_CO92_811233_856928 Ypestis_Nepal516_3625304_3654736 30850 C . 14612 1 14612 1 1 Ypestis_CO92_811233_856928 Ypestis_Nepal516_3625304_3654736 31540 C . 15301 1 14133 1 1 Ypestis_CO92_811233_856928 Ypestis_Nepal516_3625304_3654736 31541 C . 15301 1 14133 1 1 Ypestis_CO92_811233_856928 Ypestis_Nepal516_3625304_3654736 31542 A . 15301 1 14133 1 1 Ypestis_CO92_811233_856928 Ypestis_Nepal516_3625304_3654736 31543 C . 15301 1 14133 1 1 Ypestis_CO92_811233_856928 Ypestis_Nepal516_3625304_3654736 31544 C . 15301 1 14133 1 1 Ypestis_CO92_811233_856928 Ypestis_Nepal516_3625304_3654736 31545 A . 15301 1 14133 1 1 Ypestis_CO92_811233_856928 Ypestis_Nepal516_3625304_3654736 31546 A . 15301 1 14133 1 1 Ypestis_CO92_811233_856928 Ypestis_Nepal516_3625304_3654736 32460 C . 16214 1 13220 1 1 Ypestis_CO92_811233_856928 Ypestis_Nepal516_3625304_3654736 32461 C . 16214 1 13220 1 1 Ypestis_CO92_811233_856928 Ypestis_Nepal516_3625304_3654736 32462 C . 16214 1 13220 1 1 Ypestis_CO92_811233_856928 Ypestis_Nepal516_3625304_3654736 32463 G . 16214 1 13220 1 1 Ypestis_CO92_811233_856928 Ypestis_Nepal516_3625304_3654736 32464 A . 16214 1 13220 1 1 Ypestis_CO92_811233_856928 Ypestis_Nepal516_3625304_3654736 32465 T . 16214 1 13220 1 1 Ypestis_CO92_811233_856928 Ypestis_Nepal516_3625304_3654736 32466 C . 16214 1 13220 1 1 Ypestis_CO92_811233_856928 Ypestis_Nepal516_3625304_3654736 32467 T . 16214 1 13220 1 1 Ypestis_CO92_811233_856928 Ypestis_Nepal516_3625304_3654736 32468 T . 16214 1 13220 1 1 Ypestis_CO92_811233_856928 Ypestis_Nepal516_3625304_3654736 32469 T . 16214 1 13220 1 1 Ypestis_CO92_811233_856928 Ypestis_Nepal516_3625304_3654736 32470 C . 16214 1 13220 1 1 Ypestis_CO92_811233_856928 Ypestis_Nepal516_3625304_3654736 32471 T . 16214 1 13220 1 1 Ypestis_CO92_811233_856928 Ypestis_Nepal516_3625304_3654736 32472 T . 16214 1 13220 1 1 Ypestis_CO92_811233_856928 Ypestis_Nepal516_3625304_3654736 32473 T . 16214 1 13220 1 1 Ypestis_CO92_811233_856928 Ypestis_Nepal516_3625304_3654736 32474 C . 16214 1 13220 1 1 Ypestis_CO92_811233_856928 Ypestis_Nepal516_3625304_3654736 32475 A . 16214 1 13220 1 1 Ypestis_CO92_811233_856928 Ypestis_Nepal516_3625304_3654736 32476 A . 16214 1 13220 1 1 Ypestis_CO92_811233_856928 Ypestis_Nepal516_3625304_3654736 32477 A . 16214 1 13220 1 1 Ypestis_CO92_811233_856928 Ypestis_Nepal516_3625304_3654736 34164 . G 17902 0 11532 1 1 Ypestis_CO92_811233_856928 Ypestis_Nepal516_3625304_3654736 34164 . T 17903 0 11531 1 1 Ypestis_CO92_811233_856928 Ypestis_Nepal516_3625304_3654736 34164 . G 17904 0 11530 1 1 Ypestis_CO92_811233_856928 Ypestis_Nepal516_3625304_3654736 34164 . T 17905 0 11529 1 1 Ypestis_CO92_811233_856928 Ypestis_Nepal516_3625304_3654736 34164 . G 17906 0 11528 1 1 Ypestis_CO92_811233_856928 Ypestis_Nepal516_3625304_3654736 34164 . G 17907 0 11527 1 1 Ypestis_CO92_811233_856928 Ypestis_Nepal516_3625304_3654736 34164 . T 17908 0 11526 1 1 Ypestis_CO92_811233_856928 Ypestis_Nepal516_3625304_3654736 34164 . T 17909 0 11525 1 1 Ypestis_CO92_811233_856928 Ypestis_Nepal516_3625304_3654736 34164 . G 17910 0 11524 1 1 Ypestis_CO92_811233_856928 Ypestis_Nepal516_3625304_3654736 34164 . G 17911 0 11523 1 1 Ypestis_CO92_811233_856928 Ypestis_Nepal516_3625304_3654736 34164 . T 17912 0 11522 1 1 Ypestis_CO92_811233_856928 Ypestis_Nepal516_3625304_3654736 34164 . G 17913 0 11521 1 1 Ypestis_CO92_811233_856928 Ypestis_Nepal516_3625304_3654736 34164 . T 17914 0 11520 1 1 Ypestis_CO92_811233_856928 Ypestis_Nepal516_3625304_3654736 34164 . G 17915 0 11519 1 1 Ypestis_CO92_811233_856928 Ypestis_Nepal516_3625304_3654736 34164 . G 17916 0 11518 1 1 Ypestis_CO92_811233_856928 Ypestis_Nepal516_3625304_3654736 34164 . C 17917 0 11517 1 1 Ypestis_CO92_811233_856928 Ypestis_Nepal516_3625304_3654736 34164 . T 17918 0 11516 1 1 Ypestis_CO92_811233_856928 Ypestis_Nepal516_3625304_3654736 34164 . T 17919 0 11515 1 1 Ypestis_CO92_811233_856928 Ypestis_Nepal516_3625304_3654736 34164 . G 17920 0 11514 1 1 Ypestis_CO92_811233_856928 Ypestis_Nepal516_3625304_3654736 34164 . T 17921 0 11513 1 1 Ypestis_CO92_811233_856928 Ypestis_Nepal516_3625304_3654736 34164 . G 17922 0 11512 1 1 Ypestis_CO92_811233_856928 Ypestis_Nepal516_3625304_3654736 34164 . T 17923 0 11511 1 1 Ypestis_CO92_811233_856928 Ypestis_Nepal516_3625304_3654736 34164 . G 17924 0 11510 1 1 Ypestis_CO92_811233_856928 Ypestis_Nepal516_3625304_3654736 34164 . G 17925 0 11509 1 1 Ypestis_CO92_811233_856928 Ypestis_Nepal516_3625304_3654736 34164 . T 17926 0 11508 1 1 Ypestis_CO92_811233_856928 Ypestis_Nepal516_3625304_3654736 34164 . T 17927 0 11507 1 1 Ypestis_CO92_811233_856928 Ypestis_Nepal516_3625304_3654736 34164 . G 17928 0 11506 1 1 Ypestis_CO92_811233_856928 Ypestis_Nepal516_3625304_3654736 34164 . G 17929 0 11505 1 1 Ypestis_CO92_811233_856928 Ypestis_Nepal516_3625304_3654736 34164 . T 17930 0 11504 1 1 Ypestis_CO92_811233_856928 Ypestis_Nepal516_3625304_3654736 34164 . G 17931 0 11503 1 1 Ypestis_CO92_811233_856928 Ypestis_Nepal516_3625304_3654736 34164 . T 17932 0 11502 1 1 Ypestis_CO92_811233_856928 Ypestis_Nepal516_3625304_3654736 34164 . G 17933 0 11501 1 1 Ypestis_CO92_811233_856928 Ypestis_Nepal516_3625304_3654736 34164 . G 17934 0 11500 1 1 Ypestis_CO92_811233_856928 Ypestis_Nepal516_3625304_3654736 34164 . T 17935 0 11499 1 1 Ypestis_CO92_811233_856928 Ypestis_Nepal516_3625304_3654736 34164 . T 17936 0 11498 1 1 Ypestis_CO92_811233_856928 Ypestis_Nepal516_3625304_3654736 34164 . G 17937 0 11497 1 1 Ypestis_CO92_811233_856928 Ypestis_Nepal516_3625304_3654736 34191 G T 17964 3 11470 1 1 Ypestis_CO92_811233_856928 Ypestis_Nepal516_3625304_3654736 34194 G A 17967 2 11467 1 1 Ypestis_CO92_811233_856928 Ypestis_Nepal516_3625304_3654736 34196 G A 17969 2 11465 1 1 Ypestis_CO92_811233_856928 Ypestis_Nepal516_3625304_3654736 34198 T C 17971 2 11463 1 1 Ypestis_CO92_811233_856928 Ypestis_Nepal516_3625304_3654736 34200 G T 17973 2 11461 1 1 Ypestis_CO92_811233_856928 Ypestis_Nepal516_3625304_3654736 34207 C T 17980 6 11454 1 1 Ypestis_CO92_811233_856928 Ypestis_Nepal516_3625304_3654736 34213 T C 17986 2 11448 1 1 Ypestis_CO92_811233_856928 Ypestis_Nepal516_3625304_3654736 34215 G A 17988 2 11446 1 1 Ypestis_CO92_811233_856928 Ypestis_Nepal516_3625304_3654736 34222 C T 17995 2 11439 1 1 Ypestis_CO92_811233_856928 Ypestis_Nepal516_3625304_3654736 34224 A G 17997 1 11437 1 1 Ypestis_CO92_811233_856928 Ypestis_Nepal516_3625304_3654736 34225 T C 17998 1 11436 1 1 Ypestis_CO92_811233_856928 Ypestis_Nepal516_3625304_3654736 34231 T C 18004 1 11430 1 1 Ypestis_CO92_811233_856928 Ypestis_Nepal516_3625304_3654736 34232 A G 18005 1 11429 1 1 Ypestis_CO92_811233_856928 Ypestis_Nepal516_3625304_3654736 34234 C T 18007 2 11427 1 1 Ypestis_CO92_811233_856928 Ypestis_Nepal516_3625304_3654736 34240 C T 18013 6 11421 1 1 Ypestis_CO92_811233_856928 Ypestis_Nepal516_3625304_3654736 34267 T C 18040 12 11394 1 1 Ypestis_CO92_811233_856928 Ypestis_Nepal516_3625304_3654736 34279 T C 18052 12 11382 1 1 Ypestis_CO92_811233_856928 Ypestis_Nepal516_3625304_3654736 34294 C T 18067 15 11367 1 1 Ypestis_CO92_811233_856928 Ypestis_Nepal516_3625304_3654736 34364 T . 18136 1 11298 1 1 Ypestis_CO92_811233_856928 Ypestis_Nepal516_3625304_3654736 34365 G . 18136 1 11298 1 1 Ypestis_CO92_811233_856928 Ypestis_Nepal516_3625304_3654736 34366 C . 18136 1 11298 1 1 Ypestis_CO92_811233_856928 Ypestis_Nepal516_3625304_3654736 34367 G . 18136 1 11298 1 1 Ypestis_CO92_811233_856928 Ypestis_Nepal516_3625304_3654736 34368 A . 18136 1 11298 1 1 Ypestis_CO92_811233_856928 Ypestis_Nepal516_3625304_3654736 34369 T . 18136 1 11298 1 1 Ypestis_CO92_811233_856928 Ypestis_Nepal516_3625304_3654736 34370 T . 18136 1 11298 1 1 Ypestis_CO92_811233_856928 Ypestis_Nepal516_3625304_3654736 34371 T . 18136 1 11298 1 1 Ypestis_CO92_811233_856928 Ypestis_Nepal516_3625304_3654736 34372 G . 18136 1 11298 1 1 Ypestis_CO92_811233_856928 Ypestis_Nepal516_3625304_3654736 34373 T . 18136 1 11298 1 1 Ypestis_CO92_811233_856928 Ypestis_Nepal516_3625304_3654736 34374 G . 18136 1 11298 1 1 Ypestis_CO92_811233_856928 Ypestis_Nepal516_3625304_3654736 34375 T . 18136 1 11298 1 1 Ypestis_CO92_811233_856928 Ypestis_Nepal516_3625304_3654736 34376 G . 18136 1 11298 1 1 Ypestis_CO92_811233_856928 Ypestis_Nepal516_3625304_3654736 34377 G . 18136 1 11298 1 1 Ypestis_CO92_811233_856928 Ypestis_Nepal516_3625304_3654736 34378 C . 18136 1 11298 1 1 Ypestis_CO92_811233_856928 Ypestis_Nepal516_3625304_3654736 34379 T . 18136 1 11298 1 1 Ypestis_CO92_811233_856928 Ypestis_Nepal516_3625304_3654736 34380 T . 18136 1 11298 1 1 Ypestis_CO92_811233_856928 Ypestis_Nepal516_3625304_3654736 34381 G . 18136 1 11298 1 1 Ypestis_CO92_811233_856928 Ypestis_Nepal516_3625304_3654736 35838 T . 19592 1 9842 1 1 Ypestis_CO92_811233_856928 Ypestis_Nepal516_3625304_3654736 35839 C . 19592 1 9842 1 1 Ypestis_CO92_811233_856928 Ypestis_Nepal516_3625304_3654736 35840 A . 19592 1 9842 1 1 Ypestis_CO92_811233_856928 Ypestis_Nepal516_3625304_3654736 35841 A . 19592 1 9842 1 1 Ypestis_CO92_811233_856928 Ypestis_Nepal516_3625304_3654736 35842 T . 19592 1 9842 1 1 Ypestis_CO92_811233_856928 Ypestis_Nepal516_3625304_3654736 35843 A . 19592 1 9842 1 1 Ypestis_CO92_811233_856928 Ypestis_Nepal516_3625304_3654736 35844 C . 19592 1 9842 1 1 Ypestis_CO92_811233_856928 Ypestis_Nepal516_3625304_3654736 35845 A . 19592 1 9842 1 1 Ypestis_CO92_811233_856928 Ypestis_Nepal516_3625304_3654736 35846 C . 19592 1 9842 1 1 Ypestis_CO92_811233_856928 Ypestis_Nepal516_3625304_3654736 35847 T . 19592 1 9842 1 1 Ypestis_CO92_811233_856928 Ypestis_Nepal516_3625304_3654736 35848 C . 19592 1 9842 1 1 Ypestis_CO92_811233_856928 Ypestis_Nepal516_3625304_3654736 35849 A . 19592 1 9842 1 1 Ypestis_CO92_811233_856928 Ypestis_Nepal516_3625304_3654736 35850 A . 19592 1 9842 1 1 Ypestis_CO92_811233_856928 Ypestis_Nepal516_3625304_3654736 35851 T . 19592 1 9842 1 1 Ypestis_CO92_811233_856928 Ypestis_Nepal516_3625304_3654736 35852 A . 19592 1 9842 1 1 Ypestis_CO92_811233_856928 Ypestis_Nepal516_3625304_3654736 35853 C . 19592 1 9842 1 1 Ypestis_CO92_811233_856928 Ypestis_Nepal516_3625304_3654736 35854 T . 19592 1 9842 1 1 Ypestis_CO92_811233_856928 Ypestis_Nepal516_3625304_3654736 35855 G . 19592 1 9842 1 1 Ypestis_CO92_811233_856928 Ypestis_Nepal516_3625304_3654736 574 G . 17502 1 574 1 1 Ypestis_CO92_858892_867043 Ypestis_Nepal516_3339762_3364906 575 G . 17502 1 575 1 1 Ypestis_CO92_858892_867043 Ypestis_Nepal516_3339762_3364906 576 T . 17502 1 576 1 1 Ypestis_CO92_858892_867043 Ypestis_Nepal516_3339762_3364906 577 A . 17502 1 577 1 1 Ypestis_CO92_858892_867043 Ypestis_Nepal516_3339762_3364906 578 A . 17502 1 578 1 1 Ypestis_CO92_858892_867043 Ypestis_Nepal516_3339762_3364906 579 A . 17502 1 579 1 1 Ypestis_CO92_858892_867043 Ypestis_Nepal516_3339762_3364906 580 G . 17502 1 580 1 1 Ypestis_CO92_858892_867043 Ypestis_Nepal516_3339762_3364906 581 A . 17502 1 581 1 1 Ypestis_CO92_858892_867043 Ypestis_Nepal516_3339762_3364906 6843 . C 23765 0 1310 1 1 Ypestis_CO92_858892_867043 Ypestis_Nepal516_3339762_3364906 6843 . T 23766 0 1310 1 1 Ypestis_CO92_858892_867043 Ypestis_Nepal516_3339762_3364906 6843 . G 23767 0 1310 1 1 Ypestis_CO92_858892_867043 Ypestis_Nepal516_3339762_3364906 6843 . A 23768 0 1310 1 1 Ypestis_CO92_858892_867043 Ypestis_Nepal516_3339762_3364906 6843 . T 23769 0 1310 1 1 Ypestis_CO92_858892_867043 Ypestis_Nepal516_3339762_3364906 6843 . A 23770 0 1310 1 1 Ypestis_CO92_858892_867043 Ypestis_Nepal516_3339762_3364906 6843 . C 23771 0 1310 1 1 Ypestis_CO92_858892_867043 Ypestis_Nepal516_3339762_3364906 6843 . T 23772 0 1310 1 1 Ypestis_CO92_858892_867043 Ypestis_Nepal516_3339762_3364906 6843 . T 23773 0 1310 1 1 Ypestis_CO92_858892_867043 Ypestis_Nepal516_3339762_3364906 6843 . T 23774 0 1310 1 1 Ypestis_CO92_858892_867043 Ypestis_Nepal516_3339762_3364906 6843 . A 23775 0 1310 1 1 Ypestis_CO92_858892_867043 Ypestis_Nepal516_3339762_3364906 6843 . T 23776 0 1310 1 1 Ypestis_CO92_858892_867043 Ypestis_Nepal516_3339762_3364906 6843 . A 23777 0 1310 1 1 Ypestis_CO92_858892_867043 Ypestis_Nepal516_3339762_3364906 6843 . T 23778 0 1310 1 1 Ypestis_CO92_858892_867043 Ypestis_Nepal516_3339762_3364906 6843 . C 23779 0 1310 1 1 Ypestis_CO92_858892_867043 Ypestis_Nepal516_3339762_3364906 6843 . T 23780 0 1310 1 1 Ypestis_CO92_858892_867043 Ypestis_Nepal516_3339762_3364906 6843 . C 23781 0 1310 1 1 Ypestis_CO92_858892_867043 Ypestis_Nepal516_3339762_3364906 6843 . G 23782 0 1310 1 1 Ypestis_CO92_858892_867043 Ypestis_Nepal516_3339762_3364906 6843 . C 23783 0 1310 1 1 Ypestis_CO92_858892_867043 Ypestis_Nepal516_3339762_3364906 6843 . T 23784 0 1310 1 1 Ypestis_CO92_858892_867043 Ypestis_Nepal516_3339762_3364906 6843 . G 23785 0 1310 1 1 Ypestis_CO92_858892_867043 Ypestis_Nepal516_3339762_3364906 6843 . A 23786 0 1310 1 1 Ypestis_CO92_858892_867043 Ypestis_Nepal516_3339762_3364906 6843 . T 23787 0 1310 1 1 Ypestis_CO92_858892_867043 Ypestis_Nepal516_3339762_3364906 6843 . A 23788 0 1310 1 1 Ypestis_CO92_858892_867043 Ypestis_Nepal516_3339762_3364906 6843 . C 23789 0 1310 1 1 Ypestis_CO92_858892_867043 Ypestis_Nepal516_3339762_3364906 6843 . T 23790 0 1310 1 1 Ypestis_CO92_858892_867043 Ypestis_Nepal516_3339762_3364906 6843 . T 23791 0 1310 1 1 Ypestis_CO92_858892_867043 Ypestis_Nepal516_3339762_3364906 6843 . T 23792 0 1310 1 1 Ypestis_CO92_858892_867043 Ypestis_Nepal516_3339762_3364906 6843 . A 23793 0 1310 1 1 Ypestis_CO92_858892_867043 Ypestis_Nepal516_3339762_3364906 6843 . T 23794 0 1310 1 1 Ypestis_CO92_858892_867043 Ypestis_Nepal516_3339762_3364906 6843 . A 23795 0 1310 1 1 Ypestis_CO92_858892_867043 Ypestis_Nepal516_3339762_3364906 6843 . T 23796 0 1310 1 1 Ypestis_CO92_858892_867043 Ypestis_Nepal516_3339762_3364906 6843 . C 23797 0 1310 1 1 Ypestis_CO92_858892_867043 Ypestis_Nepal516_3339762_3364906 6843 . T 23798 0 1310 1 1 Ypestis_CO92_858892_867043 Ypestis_Nepal516_3339762_3364906 6843 . C 23799 0 1310 1 1 Ypestis_CO92_858892_867043 Ypestis_Nepal516_3339762_3364906 6843 . G 23800 0 1310 1 1 Ypestis_CO92_858892_867043 Ypestis_Nepal516_3339762_3364906 6843 . C 23801 0 1310 1 1 Ypestis_CO92_858892_867043 Ypestis_Nepal516_3339762_3364906 6843 . T 23802 0 1310 1 1 Ypestis_CO92_858892_867043 Ypestis_Nepal516_3339762_3364906 6843 . G 23803 0 1310 1 1 Ypestis_CO92_858892_867043 Ypestis_Nepal516_3339762_3364906 6843 . A 23804 0 1310 1 1 Ypestis_CO92_858892_867043 Ypestis_Nepal516_3339762_3364906 6843 . T 23805 0 1310 1 1 Ypestis_CO92_858892_867043 Ypestis_Nepal516_3339762_3364906 6843 . A 23806 0 1310 1 1 Ypestis_CO92_858892_867043 Ypestis_Nepal516_3339762_3364906 6843 . C 23807 0 1310 1 1 Ypestis_CO92_858892_867043 Ypestis_Nepal516_3339762_3364906 6843 . T 23808 0 1310 1 1 Ypestis_CO92_858892_867043 Ypestis_Nepal516_3339762_3364906 6843 . T 23809 0 1310 1 1 Ypestis_CO92_858892_867043 Ypestis_Nepal516_3339762_3364906 6843 . T 23810 0 1310 1 1 Ypestis_CO92_858892_867043 Ypestis_Nepal516_3339762_3364906 6843 . A 23811 0 1310 1 1 Ypestis_CO92_858892_867043 Ypestis_Nepal516_3339762_3364906 6843 . T 23812 0 1310 1 1 Ypestis_CO92_858892_867043 Ypestis_Nepal516_3339762_3364906 6843 . A 23813 0 1310 1 1 Ypestis_CO92_858892_867043 Ypestis_Nepal516_3339762_3364906 6843 . T 23814 0 1310 1 1 Ypestis_CO92_858892_867043 Ypestis_Nepal516_3339762_3364906 6843 . C 23815 0 1310 1 1 Ypestis_CO92_858892_867043 Ypestis_Nepal516_3339762_3364906 6843 . T 23816 0 1310 1 1 Ypestis_CO92_858892_867043 Ypestis_Nepal516_3339762_3364906 6843 . C 23817 0 1310 1 1 Ypestis_CO92_858892_867043 Ypestis_Nepal516_3339762_3364906 6843 . G 23818 0 1310 1 1 Ypestis_CO92_858892_867043 Ypestis_Nepal516_3339762_3364906 6843 . C 23819 0 1310 1 1 Ypestis_CO92_858892_867043 Ypestis_Nepal516_3339762_3364906 6843 . T 23820 0 1310 1 1 Ypestis_CO92_858892_867043 Ypestis_Nepal516_3339762_3364906 6843 . G 23821 0 1310 1 1 Ypestis_CO92_858892_867043 Ypestis_Nepal516_3339762_3364906 6843 . A 23822 0 1310 1 1 Ypestis_CO92_858892_867043 Ypestis_Nepal516_3339762_3364906 6843 . T 23823 0 1310 1 1 Ypestis_CO92_858892_867043 Ypestis_Nepal516_3339762_3364906 6843 . G 23824 0 1310 1 1 Ypestis_CO92_858892_867043 Ypestis_Nepal516_3339762_3364906 6843 . C 23825 0 1310 1 1 Ypestis_CO92_858892_867043 Ypestis_Nepal516_3339762_3364906 6843 . T 23826 0 1310 1 1 Ypestis_CO92_858892_867043 Ypestis_Nepal516_3339762_3364906 6843 . T 23827 0 1310 1 1 Ypestis_CO92_858892_867043 Ypestis_Nepal516_3339762_3364906 6843 . T 23828 0 1310 1 1 Ypestis_CO92_858892_867043 Ypestis_Nepal516_3339762_3364906 6843 . A 23829 0 1310 1 1 Ypestis_CO92_858892_867043 Ypestis_Nepal516_3339762_3364906 6843 . T 23830 0 1310 1 1 Ypestis_CO92_858892_867043 Ypestis_Nepal516_3339762_3364906 6843 . A 23831 0 1310 1 1 Ypestis_CO92_858892_867043 Ypestis_Nepal516_3339762_3364906 6843 . T 23832 0 1310 1 1 Ypestis_CO92_858892_867043 Ypestis_Nepal516_3339762_3364906 6843 . C 23833 0 1310 1 1 Ypestis_CO92_858892_867043 Ypestis_Nepal516_3339762_3364906 6843 . T 23834 0 1310 1 1 Ypestis_CO92_858892_867043 Ypestis_Nepal516_3339762_3364906 6843 . C 23835 0 1310 1 1 Ypestis_CO92_858892_867043 Ypestis_Nepal516_3339762_3364906 6843 . A 23836 0 1310 1 1 Ypestis_CO92_858892_867043 Ypestis_Nepal516_3339762_3364906 3925 C . 3924 3925 3924 1 1 Ypestis_CO92_867210_905965 Ypestis_Nepal516_3365073_3403827 10049 T C 10048 6124 10048 1 1 Ypestis_CO92_867210_905965 Ypestis_Nepal516_3365073_3403827 21991 G T 21990 5871 16766 1 1 Ypestis_CO92_867210_905965 Ypestis_Nepal516_3365073_3403827 27862 T C 27861 5871 10895 1 1 Ypestis_CO92_867210_905965 Ypestis_Nepal516_3365073_3403827 8351 A G 8351 8351 8351 1 1 Ypestis_CO92_908805_932466 Ypestis_Nepal516_3406667_3430328 87 T . 86 1 86 1 1 Ypestis_CO92_932652_958152 Ypestis_Nepal516_3430514_3456004 88 G . 86 1 86 1 1 Ypestis_CO92_932652_958152 Ypestis_Nepal516_3430514_3456004 89 T . 86 1 86 1 1 Ypestis_CO92_932652_958152 Ypestis_Nepal516_3430514_3456004 90 T . 86 1 86 1 1 Ypestis_CO92_932652_958152 Ypestis_Nepal516_3430514_3456004 91 T . 86 1 86 1 1 Ypestis_CO92_932652_958152 Ypestis_Nepal516_3430514_3456004 92 A . 86 1 86 1 1 Ypestis_CO92_932652_958152 Ypestis_Nepal516_3430514_3456004 93 T . 86 1 86 1 1 Ypestis_CO92_932652_958152 Ypestis_Nepal516_3430514_3456004 94 G . 86 1 86 1 1 Ypestis_CO92_932652_958152 Ypestis_Nepal516_3430514_3456004 95 G . 86 1 86 1 1 Ypestis_CO92_932652_958152 Ypestis_Nepal516_3430514_3456004 96 T . 86 1 86 1 1 Ypestis_CO92_932652_958152 Ypestis_Nepal516_3430514_3456004 97 T . 86 1 86 1 1 Ypestis_CO92_932652_958152 Ypestis_Nepal516_3430514_3456004 98 C . 86 1 86 1 1 Ypestis_CO92_932652_958152 Ypestis_Nepal516_3430514_3456004 99 A . 86 1 86 1 1 Ypestis_CO92_932652_958152 Ypestis_Nepal516_3430514_3456004 100 A . 86 1 86 1 1 Ypestis_CO92_932652_958152 Ypestis_Nepal516_3430514_3456004 101 C . 86 1 86 1 1 Ypestis_CO92_932652_958152 Ypestis_Nepal516_3430514_3456004 102 T . 86 1 86 1 1 Ypestis_CO92_932652_958152 Ypestis_Nepal516_3430514_3456004 11515 . C 11500 0 11500 1 1 Ypestis_CO92_932652_958152 Ypestis_Nepal516_3430514_3456004 11515 . C 11501 0 11501 1 1 Ypestis_CO92_932652_958152 Ypestis_Nepal516_3430514_3456004 11515 . G 11502 0 11502 1 1 Ypestis_CO92_932652_958152 Ypestis_Nepal516_3430514_3456004 11515 . T 11503 0 11503 1 1 Ypestis_CO92_932652_958152 Ypestis_Nepal516_3430514_3456004 11515 . G 11504 0 11504 1 1 Ypestis_CO92_932652_958152 Ypestis_Nepal516_3430514_3456004 11515 . A 11505 0 11505 1 1 Ypestis_CO92_932652_958152 Ypestis_Nepal516_3430514_3456004 2755 . T 2756 0 2755 1 1 Ypestis_CO92_958518_991082 Ypestis_Nepal516_3456370_3488937 2755 . A 2757 0 2755 1 1 Ypestis_CO92_958518_991082 Ypestis_Nepal516_3456370_3488937 2755 . A 2758 0 2755 1 1 Ypestis_CO92_958518_991082 Ypestis_Nepal516_3456370_3488937 10299 A G 10299 1392 1392 1 1 Ypestis_CO92_991255_1002944 Ypestis_Nepal516_3489110_3500799