/users/252891/scratch/edge/database/yersinia/results/Ypestis_CO92_norepeats.fna /users/252891/scratch/edge/database/yersinia/results/Ypestis_Antiqua_norepeats.fna NUCMER [S1] [E1] [S2] [E2] [LEN 1] [LEN 2] [% IDY] [LEN R] [LEN Q] [COV R] [COV Q] [TAGS] 1 4644 4644 1 4644 4644 100.00 6451 4645 71.99 99.98 Ypestis_CO92_1003117_1009567 Ypestis_Antiqua_411092_415736 4652 6450 1799 1 1799 1799 100.00 6451 1799 27.89 100.00 Ypestis_CO92_1003117_1009567 Ypestis_Antiqua_407326_409124 1 3743 3743 1 3743 3743 100.00 3766 3744 99.39 99.97 Ypestis_CO92_1009744_1013509 Ypestis_Antiqua_403406_407149 1 3430 3430 1 3430 3430 99.97 3431 3431 99.97 99.97 Ypestis_CO92_1016182_1019612 Ypestis_Antiqua_399241_402671 1 493 493 1 493 493 100.00 44122 494 1.12 99.80 Ypestis_CO92_1019783_1063904 Ypestis_Antiqua_398577_399070 511 43643 43593 479 43133 43115 99.95 44122 43593 97.76 98.90 Ypestis_CO92_1019783_1063904 Ypestis_Antiqua_354257_397849 23634 44121 20470 1 20488 20470 99.91 44122 43593 46.43 46.96 Ypestis_CO92_1019783_1063904 Ypestis_Antiqua_354257_397849 1 1493 4502 3010 1493 1493 100.00 1493 4503 100.00 33.16 Ypestis_CO92_104085_105577 Ypestis_Antiqua_3849635_3854137 1 617 617 1 617 617 100.00 618 618 99.84 99.84 Ypestis_CO92_1064006_1064623 Ypestis_Antiqua_353538_354155 1 722 722 1 722 722 100.00 723 723 99.86 99.86 Ypestis_CO92_1065232_1065954 Ypestis_Antiqua_352207_352929 1 1621 1621 1 1621 1621 100.00 1622 1622 99.94 99.94 Ypestis_CO92_1066587_1068208 Ypestis_Antiqua_349953_351574 1 614 614 1 614 614 100.00 615 615 99.84 99.84 Ypestis_CO92_1070335_1070949 Ypestis_Antiqua_347212_347826 1 3140 3159 1 3140 3159 99.40 8391 3160 37.42 99.97 Ypestis_CO92_1071581_1079971 Ypestis_Antiqua_343421_346580 3700 8390 4691 1 4691 4691 99.98 8391 4691 55.91 100.00 Ypestis_CO92_1071581_1079971 Ypestis_Antiqua_338171_342861 1 3011 3011 1 3011 3011 100.00 19541 4503 15.41 66.87 Ypestis_CO92_107536_127076 Ypestis_Antiqua_3849635_3854137 3015 19541 1 16491 16527 16491 99.78 19541 16491 84.58 100.00 Ypestis_CO92_107536_127076 Ypestis_Antiqua_292719_309209 1 20605 20600 1 20605 20600 99.97 20607 20672 99.99 99.65 Ypestis_CO92_1086850_1107456 Ypestis_Antiqua_310692_331363 1 25602 1 25603 25602 25603 99.99 36984 25603 69.22 100.00 Ypestis_CO92_1108940_1145923 Ypestis_Antiqua_3701064_3726666 25618 36984 1 11367 11367 11367 100.00 36984 11367 30.73 100.00 Ypestis_CO92_1108940_1145923 Ypestis_Antiqua_3727393_3738759 1 16922 8214 25135 16922 16922 99.99 16922 25135 100.00 67.32 Ypestis_CO92_1147889_1164810 Ypestis_Antiqua_553757_578891 1 121 1 121 121 121 100.00 121 121 100.00 100.00 Ypestis_CO92_1164890_1165010 Ypestis_Antiqua_578971_579091 1 7454 1 7454 7454 7454 100.00 7454 7454 100.00 100.00 Ypestis_CO92_1165091_1172544 Ypestis_Antiqua_579172_586625 1 149 1 149 149 149 100.00 4628 149 3.22 100.00 Ypestis_CO92_1172722_1177349 Ypestis_Antiqua_586803_586951 154 4628 1 4475 4475 4475 100.00 4628 4475 96.69 100.00 Ypestis_CO92_1172722_1177349 Ypestis_Antiqua_588916_593390 1 9029 1 9029 9029 9029 99.98 39117 9029 23.08 100.00 Ypestis_CO92_1178077_1217193 Ypestis_Antiqua_594118_603146 9043 39117 1 30060 30075 30060 99.94 39117 30060 76.88 100.00 Ypestis_CO92_1178077_1217193 Ypestis_Antiqua_603870_633929 1 9455 1 9455 9455 9455 100.00 9455 9455 100.00 100.00 Ypestis_CO92_1222819_1232273 Ypestis_Antiqua_639554_649008 2 199 1 198 198 198 100.00 199 198 99.50 100.00 Ypestis_CO92_1234244_1234442 Ypestis_Antiqua_650980_651177 1 10268 1 10269 10268 10269 99.99 10268 10269 100.00 100.00 Ypestis_CO92_1234525_1244792 Ypestis_Antiqua_651260_661528 1 27456 1 27456 27456 27456 99.99 27456 27456 100.00 100.00 Ypestis_CO92_1245590_1273045 Ypestis_Antiqua_662326_689781 1 4833 1 4833 4833 4833 100.00 4833 4833 100.00 100.00 Ypestis_CO92_1273227_1278059 Ypestis_Antiqua_689963_694795 1 10183 8 10190 10183 10183 99.98 30006 29975 33.94 33.97 Ypestis_CO92_1280030_1310035 Ypestis_Antiqua_1193018_1222992 154 30006 161 29975 29853 29815 99.78 30006 29975 99.49 99.47 Ypestis_CO92_1280030_1310035 Ypestis_Antiqua_1193018_1222992 1 61407 62128 722 61407 61407 99.93 61407 62129 100.00 98.84 Ypestis_CO92_128641_190047 Ypestis_Antiqua_3635410_3697538 1 10347 1 10374 10347 10374 99.74 10347 10374 100.00 100.00 Ypestis_CO92_1310774_1321120 Ypestis_Antiqua_1223731_1234104 1 22023 1 22023 22023 22023 99.87 61471 33473 35.83 65.79 Ypestis_CO92_1321848_1383318 Ypestis_Antiqua_1022596_1056068 21930 33456 21965 33473 11527 11509 99.78 61471 33473 18.75 34.38 Ypestis_CO92_1321848_1383318 Ypestis_Antiqua_1022596_1056068 33469 61471 1 28003 28003 28003 100.00 61471 28007 45.55 99.99 Ypestis_CO92_1321848_1383318 Ypestis_Antiqua_1058040_1086046 1 410 9 418 410 410 100.00 410 418 100.00 98.09 Ypestis_CO92_1384056_1384465 Ypestis_Antiqua_1086753_1087170 1 19279 1 19293 19279 19293 99.70 19279 19293 100.00 100.00 Ypestis_CO92_1384539_1403817 Ypestis_Antiqua_1087244_1106536 1 9769 1 9769 9769 9769 100.00 9769 9769 100.00 100.00 Ypestis_CO92_1403989_1413757 Ypestis_Antiqua_1106708_1116476 1 1056 1 1056 1056 1056 100.00 1477 1056 71.50 100.00 Ypestis_CO92_1413876_1415352 Ypestis_Antiqua_1116595_1117650 1062 1477 1 416 416 416 100.00 1477 416 28.17 100.00 Ypestis_CO92_1413876_1415352 Ypestis_Antiqua_1119615_1120030 57 4178 1 4122 4122 4122 100.00 4178 4122 98.66 100.00 Ypestis_CO92_1415847_1420024 Ypestis_Antiqua_1120581_1124702 3 27425 1 27408 27423 27408 99.94 81972 27408 33.45 100.00 Ypestis_CO92_1420759_1502730 Ypestis_Antiqua_1125439_1152846 27434 64190 1 36745 36757 36745 99.97 81972 36745 44.84 100.00 Ypestis_CO92_1420759_1502730 Ypestis_Antiqua_1154300_1191044 64216 81972 1 17757 17757 17757 100.00 81972 34744 21.66 51.11 Ypestis_CO92_1420759_1502730 Ypestis_Antiqua_696770_731513 1 16976 17769 34744 16976 16976 100.00 16976 34744 100.00 48.86 Ypestis_CO92_1504701_1521676 Ypestis_Antiqua_696770_731513 1 16002 1 16002 16002 16002 100.00 16002 16002 100.00 100.00 Ypestis_CO92_1521771_1537772 Ypestis_Antiqua_731608_747609 1 41656 1 41614 41656 41614 99.89 54538 42269 76.38 98.45 Ypestis_CO92_1538501_1593038 Ypestis_Antiqua_748338_790606 41609 42248 41630 42269 640 640 100.00 54538 42269 1.17 1.51 Ypestis_CO92_1538501_1593038 Ypestis_Antiqua_748338_790606 42253 54538 1 12286 12286 12286 100.00 54538 12286 22.53 100.00 Ypestis_CO92_1538501_1593038 Ypestis_Antiqua_792570_804855 1 3700 1 3700 3700 3700 100.00 3700 3700 100.00 100.00 Ypestis_CO92_1593772_1597471 Ypestis_Antiqua_805589_809288 1 21051 1 21070 21051 21070 99.91 21051 21070 100.00 100.00 Ypestis_CO92_1597647_1618697 Ypestis_Antiqua_809464_830533 1 974 1 974 974 974 100.00 974 974 100.00 100.00 Ypestis_CO92_1619435_1620408 Ypestis_Antiqua_831271_832244 1 4055 1 4055 4055 4055 100.00 4055 4055 100.00 100.00 Ypestis_CO92_1622378_1626432 Ypestis_Antiqua_834214_838268 1 6687 1 6687 6687 6687 99.96 28780 28915 23.23 23.13 Ypestis_CO92_1627177_1655956 Ypestis_Antiqua_839013_867927 6675 28780 6744 28849 22106 22106 100.00 28780 28915 76.81 76.45 Ypestis_CO92_1627177_1655956 Ypestis_Antiqua_839013_867927 1 4661 1 4661 4661 4661 100.00 4661 4661 100.00 100.00 Ypestis_CO92_1662841_1667501 Ypestis_Antiqua_876705_881365 1 24293 1 24293 24293 24293 99.99 24293 24300 100.00 99.97 Ypestis_CO92_1669628_1693920 Ypestis_Antiqua_883492_907791 1 26105 2 26091 26105 26090 99.93 31193 31179 83.69 83.68 Ypestis_CO92_1695250_1726442 Ypestis_Antiqua_909113_940291 6103 31193 6104 31179 25091 25076 99.93 31193 31179 80.44 80.43 Ypestis_CO92_1695250_1726442 Ypestis_Antiqua_909113_940291 1 37940 1 37975 37940 37975 99.90 37940 37975 100.00 100.00 Ypestis_CO92_1729129_1767068 Ypestis_Antiqua_941019_978993 169 347 179 1 179 179 100.00 348 179 51.44 100.00 Ypestis_CO92_17486_17833 Ypestis_Antiqua_3942039_3942217 1 10624 1 10629 10624 10629 99.95 10624 10629 100.00 100.00 Ypestis_CO92_1767156_1777779 Ypestis_Antiqua_979081_989709 1 18474 1 18475 18474 18475 99.99 18474 18475 100.00 100.00 Ypestis_CO92_1779098_1797571 Ypestis_Antiqua_991028_1009502 1 9317 1 9317 9317 9317 99.99 9317 9317 100.00 100.00 Ypestis_CO92_1797676_1806992 Ypestis_Antiqua_1009607_1018923 1 3091 3091 1 3091 3091 99.97 3092 3092 99.97 99.97 Ypestis_CO92_1808313_1811404 Ypestis_Antiqua_2172951_2176042 1 5284 5284 1 5284 5284 100.00 5285 5285 99.98 99.98 Ypestis_CO92_1812731_1818015 Ypestis_Antiqua_2166342_2171626 1 6985 6985 1 6985 6985 100.00 6986 6986 99.99 99.99 Ypestis_CO92_1818748_1825733 Ypestis_Antiqua_2158624_2165609 5 1144 1140 1 1140 1140 100.00 1145 1140 99.56 100.00 Ypestis_CO92_1826462_1827606 Ypestis_Antiqua_2156751_2157890 53 5353 5301 1 5301 5301 100.00 5354 5334 99.01 99.38 Ypestis_CO92_1827777_1833130 Ypestis_Antiqua_2151247_2156580 1 8565 8565 1 8565 8565 100.00 8565 8566 100.00 99.99 Ypestis_CO92_1833861_1842425 Ypestis_Antiqua_2139992_2148557 1 278 37710 37433 278 278 100.00 279 37711 99.64 0.74 Ypestis_CO92_1843745_1844023 Ypestis_Antiqua_2100963_2138673 1 32931 37432 4487 32931 32946 99.95 58495 37711 56.30 87.36 Ypestis_CO92_1845983_1904477 Ypestis_Antiqua_2100963_2138673 12921 37417 24512 1 24497 24512 99.93 58495 37711 41.88 65.00 Ypestis_CO92_1845983_1904477 Ypestis_Antiqua_2100963_2138673 37427 58494 21049 1 21068 21049 99.91 58495 21049 36.02 100.00 Ypestis_CO92_1845983_1904477 Ypestis_Antiqua_2077946_2098994 1 1673 1673 1 1673 1673 100.00 22265 1674 7.51 99.94 Ypestis_CO92_1906606_1928870 Ypestis_Antiqua_2074144_2075817 1841 22262 20418 1 20422 20418 99.87 22265 20418 91.72 100.00 Ypestis_CO92_1906606_1928870 Ypestis_Antiqua_2053400_2073817 1 6821 6821 1 6821 6821 100.00 6822 6822 99.99 99.99 Ypestis_CO92_19154_25975 Ypestis_Antiqua_3933897_3940718 1 715 715 1 715 715 100.00 716 62129 99.86 1.15 Ypestis_CO92_192013_192728 Ypestis_Antiqua_3635410_3697538 1 26767 26746 1 26767 26746 99.92 26768 26747 100.00 100.00 Ypestis_CO92_192907_219674 Ypestis_Antiqua_3608485_3635231 1 20653 38085 17460 20653 20626 99.85 41281 38085 50.03 54.16 Ypestis_CO92_1930830_1972110 Ypestis_Antiqua_2013353_2051437 658 38113 37429 1 37456 37429 99.92 41281 38085 90.73 98.28 Ypestis_CO92_1930830_1972110 Ypestis_Antiqua_2013353_2051437 38118 41280 3163 1 3163 3163 100.00 41281 3163 7.66 100.00 Ypestis_CO92_1930830_1972110 Ypestis_Antiqua_2008227_2011389 1 1243 1 1243 1243 1243 100.00 1245 1243 99.84 100.00 Ypestis_CO92_1973434_1974678 Ypestis_Antiqua_1254566_1255808 2 15915 1 15897 15914 15897 99.84 15915 49727 99.99 31.97 Ypestis_CO92_1976639_1992553 Ypestis_Antiqua_1257772_1307498 1 33844 15902 49727 33844 33826 99.93 45052 49727 75.12 68.02 Ypestis_CO92_1994517_2039568 Ypestis_Antiqua_1257772_1307498 33858 45052 1 11206 11195 11206 99.90 45052 11218 24.85 99.89 Ypestis_CO92_1994517_2039568 Ypestis_Antiqua_1309471_1320688 1 5465 1 5464 5465 5464 99.93 11817 5464 46.25 100.00 Ypestis_CO92_1_11817 Ypestis_Antiqua_1_5464 5466 11817 1 6355 6352 6355 99.95 11817 6355 53.75 100.00 Ypestis_CO92_1_11817 Ypestis_Antiqua_7424_13778 1 11325 1 11325 11325 11325 100.00 11325 11325 100.00 100.00 Ypestis_CO92_2040309_2051633 Ypestis_Antiqua_1321417_1332741 1 40865 1 40876 40865 40876 99.87 40865 40876 100.00 100.00 Ypestis_CO92_2052326_2093190 Ypestis_Antiqua_1333434_1374309 1 1223 1 1223 1223 1223 100.00 21671 1223 5.64 100.00 Ypestis_CO92_2093362_2115032 Ypestis_Antiqua_1374481_1375703 1224 21671 1 20449 20448 20449 99.99 21671 20449 94.36 100.00 Ypestis_CO92_2093362_2115032 Ypestis_Antiqua_1377663_1398111 1 20343 1 20343 20343 20343 99.99 20345 20343 99.99 100.00 Ypestis_CO92_2115110_2135454 Ypestis_Antiqua_1398189_1418531 2 33872 1 33871 33871 33871 99.99 33872 33871 100.00 100.00 Ypestis_CO92_2137416_2171287 Ypestis_Antiqua_1420496_1454366 1 17978 1 17976 17978 17976 99.98 30029 17976 59.87 100.00 Ypestis_CO92_2171392_2201420 Ypestis_Antiqua_1454471_1472446 17979 30029 1 12051 12051 12051 99.99 30029 12051 40.13 100.00 Ypestis_CO92_2171392_2201420 Ypestis_Antiqua_1474405_1486455 1 34672 1 34665 34672 34665 99.97 34672 34665 100.00 100.00 Ypestis_CO92_2201591_2236262 Ypestis_Antiqua_1486626_1521290 1 25296 25296 1 25296 25296 99.99 25302 25357 99.98 99.76 Ypestis_CO92_220424_245725 Ypestis_Antiqua_3580480_3605836 1 19017 1 18985 19017 18985 99.83 19017 18985 100.00 100.00 Ypestis_CO92_2238218_2257234 Ypestis_Antiqua_1523249_1542233 1 34949 1 34948 34949 34948 99.99 34949 34948 100.00 100.00 Ypestis_CO92_2258554_2293502 Ypestis_Antiqua_1543553_1578500 1 277 34 310 277 277 100.00 439 310 63.10 89.35 Ypestis_CO92_2294422_2294860 Ypestis_Antiqua_1578677_1578986 293 439 1 147 147 147 100.00 439 2250 33.49 6.53 Ypestis_CO92_2294422_2294860 Ypestis_Antiqua_1580961_1583210 1 2100 151 2250 2100 2100 100.00 2100 2250 100.00 93.33 Ypestis_CO92_2296823_2298922 Ypestis_Antiqua_1580961_1583210 1 4867 1 4867 4867 4867 99.98 4867 4867 100.00 100.00 Ypestis_CO92_2299015_2303881 Ypestis_Antiqua_1583303_1588169 1 2729 1 2729 2729 2729 100.00 2729 2729 100.00 100.00 Ypestis_CO92_2304604_2307332 Ypestis_Antiqua_1588892_1591620 1 23146 1 23171 23146 23171 99.89 23146 23171 100.00 100.00 Ypestis_CO92_2307425_2330570 Ypestis_Antiqua_1591713_1614883 1 4411 1 4411 4411 4411 100.00 11736 4411 37.59 100.00 Ypestis_CO92_2331034_2342769 Ypestis_Antiqua_1615347_1619757 4426 11736 1 7311 7311 7311 100.00 11736 7311 62.30 100.00 Ypestis_CO92_2331034_2342769 Ypestis_Antiqua_1620483_1627793 1 10945 1 10945 10945 10945 100.00 10945 10945 100.00 100.00 Ypestis_CO92_2342939_2353883 Ypestis_Antiqua_1627963_1638907 1 10234 1 10234 10234 10234 99.99 10235 10234 99.99 100.00 Ypestis_CO92_2354001_2364235 Ypestis_Antiqua_1639025_1649258 2289 13294 1 11006 11006 11006 100.00 13295 11006 82.78 100.00 Ypestis_CO92_2376974_2390268 Ypestis_Antiqua_1651222_1662227 1 12248 1 12248 12248 12248 100.00 12248 12248 100.00 100.00 Ypestis_CO92_2390998_2403245 Ypestis_Antiqua_1662959_1675206 1 35754 2 35756 35754 35755 99.99 35754 35756 100.00 100.00 Ypestis_CO92_2404569_2440322 Ypestis_Antiqua_1676529_1712284 1 209 1 209 209 209 100.00 209 209 100.00 100.00 Ypestis_CO92_2440851_2441059 Ypestis_Antiqua_1712813_1713021 1 7815 3 7817 7815 7815 100.00 7818 7817 99.96 99.97 Ypestis_CO92_2442377_2450194 Ypestis_Antiqua_1714337_1722153 1 14148 3 14150 14148 14148 100.00 14148 14150 100.00 99.99 Ypestis_CO92_2452160_2466307 Ypestis_Antiqua_1724120_1738269 1 3692 1 3699 3692 3699 99.78 3692 3699 100.00 100.00 Ypestis_CO92_2466482_2470173 Ypestis_Antiqua_1738444_1742142 1 24739 2 24723 24739 24722 99.92 116867 82835 21.17 29.84 Ypestis_CO92_2471492_2588358 Ypestis_Antiqua_1743460_1826294 4731 51623 4732 51616 46893 46885 99.93 116867 82835 40.13 56.60 Ypestis_CO92_2471492_2588358 Ypestis_Antiqua_1743460_1826294 31629 81257 31613 81223 49629 49611 99.91 116867 82835 42.47 59.89 Ypestis_CO92_2471492_2588358 Ypestis_Antiqua_1743460_1826294 82509 82687 81223 81401 179 179 100.00 116867 82835 0.15 0.22 Ypestis_CO92_2471492_2588358 Ypestis_Antiqua_1743460_1826294 91391 92642 81363 82614 1252 1252 99.52 116867 82835 1.07 1.51 Ypestis_CO92_2471492_2588358 Ypestis_Antiqua_1743460_1826294 94704 94929 82610 82835 226 226 100.00 116867 82835 0.19 0.27 Ypestis_CO92_2471492_2588358 Ypestis_Antiqua_1743460_1826294 94933 106548 1 11616 11616 11616 99.96 116867 21984 9.94 52.84 Ypestis_CO92_2471492_2588358 Ypestis_Antiqua_1828257_1850240 106500 116867 11617 21984 10368 10368 99.98 116867 21984 8.87 47.16 Ypestis_CO92_2471492_2588358 Ypestis_Antiqua_1828257_1850240 3 25894 25892 1 25892 25892 100.00 25895 25892 99.99 100.00 Ypestis_CO92_247683_273577 Ypestis_Antiqua_4519270_4545161 1 10575 1 10575 10575 10575 99.99 10575 10575 100.00 100.00 Ypestis_CO92_2588531_2599105 Ypestis_Antiqua_1850413_1860987 1 4420 3 4422 4420 4420 100.00 4420 4422 100.00 99.95 Ypestis_CO92_2599826_2604245 Ypestis_Antiqua_1861706_1866127 127 6250 12 6135 6124 6124 100.00 32667 6135 18.75 99.82 Ypestis_CO92_2604424_2637090 Ypestis_Antiqua_1866306_1872440 6265 32667 1 26390 26403 26390 99.81 32667 26390 80.82 100.00 Ypestis_CO92_2604424_2637090 Ypestis_Antiqua_1874414_1900803 1 8418 1 8418 8418 8418 99.99 8418 8418 100.00 100.00 Ypestis_CO92_2637821_2646238 Ypestis_Antiqua_1901534_1909951 1 10982 1 10976 10982 10976 99.93 11056 28126 99.33 39.02 Ypestis_CO92_2646967_2658022 Ypestis_Antiqua_1910680_1938805 505 17657 10974 28126 17153 17153 99.98 17657 28126 97.15 60.99 Ypestis_CO92_2659984_2677640 Ypestis_Antiqua_1910680_1938805 1 6286 6286 1 6286 6286 100.00 12565 6289 50.03 99.95 Ypestis_CO92_26702_39266 Ypestis_Antiqua_3926884_3933172 6323 12552 6230 1 6230 6230 100.00 12565 6230 49.58 100.00 Ypestis_CO92_26702_39266 Ypestis_Antiqua_3919908_3926137 1 1261 1 1261 1261 1261 100.00 10961 1261 11.50 100.00 Ypestis_CO92_2677816_2688776 Ypestis_Antiqua_1938981_1940241 1497 10961 1 9465 9465 9465 99.98 10961 9465 86.35 100.00 Ypestis_CO92_2677816_2688776 Ypestis_Antiqua_1940714_1950178 1 2565 1 2565 2565 2565 100.00 2565 2565 100.00 100.00 Ypestis_CO92_2688988_2691552 Ypestis_Antiqua_1950390_1952954 1 373 7 379 373 373 100.00 373 379 100.00 98.42 Ypestis_CO92_2692300_2692672 Ypestis_Antiqua_1953697_1954075 1 26052 2 26034 26052 26033 99.93 50889 50870 51.19 51.18 Ypestis_CO92_2694637_2745525 Ypestis_Antiqua_1956039_2006908 6059 50889 6060 50870 44831 44811 99.95 50889 50870 88.10 88.09 Ypestis_CO92_2694637_2745525 Ypestis_Antiqua_1956039_2006908 1 26642 37268 10627 26642 26642 99.99 26642 37269 100.00 71.49 Ypestis_CO92_273751_300392 Ypestis_Antiqua_4481828_4519096 1 1810 1 1810 1810 1810 100.00 38065 1810 4.76 100.00 Ypestis_CO92_2746842_2784906 Ypestis_Antiqua_2177359_2179168 1806 22841 1 21008 21036 21008 99.67 38065 36135 55.26 58.14 Ypestis_CO92_2746842_2784906 Ypestis_Antiqua_2180487_2216621 22693 38065 20798 36135 15373 15338 99.09 38065 36135 40.39 42.45 Ypestis_CO92_2746842_2784906 Ypestis_Antiqua_2180487_2216621 1 2022 1 2022 2022 2022 100.00 2022 2022 100.00 100.00 Ypestis_CO92_2785155_2787176 Ypestis_Antiqua_2216870_2218891 1 2229 1 2229 2229 2229 100.00 2229 2229 100.00 100.00 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Ypestis_CO92_3335663_3335833 Ypestis_Antiqua_2440855_2451023 1 9925 246 10169 9925 9924 99.99 9925 10169 100.00 97.59 Ypestis_CO92_3336061_3345985 Ypestis_Antiqua_2440855_2451023 1 13907 1 13899 13907 13899 99.94 13907 13899 100.00 100.00 Ypestis_CO92_3346736_3360642 Ypestis_Antiqua_2451774_2465672 1 28599 1 28592 28599 28592 99.97 56675 28592 50.46 100.00 Ypestis_CO92_3360821_3417495 Ypestis_Antiqua_2465851_2494442 28603 56675 1 28073 28073 28073 99.99 56675 28073 49.53 100.00 Ypestis_CO92_3360821_3417495 Ypestis_Antiqua_2496405_2524477 1 9458 1 9458 9458 9458 99.99 9462 9458 99.96 100.00 Ypestis_CO92_3418239_3427700 Ypestis_Antiqua_2525221_2534678 1 16020 2 16021 16020 16020 99.99 16020 16021 100.00 99.99 Ypestis_CO92_3428428_3444447 Ypestis_Antiqua_2860092_2876112 1 1675 1 1675 1675 1675 100.00 1675 1675 100.00 100.00 Ypestis_CO92_3444856_3446530 Ypestis_Antiqua_2876521_2878195 1 35788 1 35795 35788 35795 99.97 35788 38790 100.00 92.28 Ypestis_CO92_3446698_3482485 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100.00 8340 8340 100.00 100.00 Ypestis_CO92_3843494_3851833 Ypestis_Antiqua_3275944_3284283 1 2731 1 2730 2731 2730 99.96 2731 2730 100.00 100.00 Ypestis_CO92_3852243_3854973 Ypestis_Antiqua_3284693_3287422 1 38991 1 38991 38991 38991 99.99 38991 38991 100.00 100.00 Ypestis_CO92_3855157_3894147 Ypestis_Antiqua_3287606_3326596 1 6504 1 6504 6504 6504 100.00 6504 6504 100.00 100.00 Ypestis_CO92_3894321_3900824 Ypestis_Antiqua_3326770_3333273 1 6721 1 6721 6721 6721 99.97 6721 6721 100.00 100.00 Ypestis_CO92_3902283_3909003 Ypestis_Antiqua_58207_64927 1 18236 1 18236 18236 18236 100.00 18236 18236 100.00 100.00 Ypestis_CO92_3909083_3927318 Ypestis_Antiqua_65007_83242 1 19623 1 19622 19623 19622 99.99 19623 19622 100.00 100.00 Ypestis_CO92_3927503_3947125 Ypestis_Antiqua_83427_103048 1 2510 1 2510 2510 2510 100.00 2514 2510 99.84 100.00 Ypestis_CO92_3947864_3950377 Ypestis_Antiqua_103787_106296 1 2907 2908 1 2907 2908 99.97 2908 2908 99.97 100.00 Ypestis_CO92_3952336_3955243 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100.00 Ypestis_CO92_4227010_4236787 Ypestis_Antiqua_3837897_3847670 1 29659 35468 5810 29659 29659 99.97 37551 35474 78.98 83.61 Ypestis_CO92_4238755_4276305 Ypestis_Antiqua_255282_290755 29555 35349 5816 1 5795 5816 99.64 37551 35474 15.43 16.40 Ypestis_CO92_4238755_4276305 Ypestis_Antiqua_255282_290755 35361 37551 2191 1 2191 2191 100.00 37551 2191 5.83 100.00 Ypestis_CO92_4238755_4276305 Ypestis_Antiqua_251121_253311 1 39359 39379 1 39359 39379 99.81 39360 39380 100.00 100.00 Ypestis_CO92_4277050_4316409 Ypestis_Antiqua_210998_250377 1 7228 7228 1 7228 7228 99.99 7229 7229 99.99 99.99 Ypestis_CO92_4316580_4323808 Ypestis_Antiqua_203599_210827 1 699 699 1 699 699 100.00 700 703 99.86 99.43 Ypestis_CO92_4324540_4325239 Ypestis_Antiqua_200209_200911 1 74 74 1 74 74 100.00 75 75 98.67 98.67 Ypestis_CO92_4325324_4325398 Ypestis_Antiqua_200050_200124 1 24976 24977 1 24976 24977 99.99 24977 24978 100.00 100.00 Ypestis_CO92_4325485_4350461 Ypestis_Antiqua_174986_199963 1 15007 32101 17095 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74.68 Ypestis_CO92_4469105_4517677 Ypestis_Antiqua_4269585_4318103 1 7638 7638 1 7638 7638 100.00 7639 7639 99.99 99.99 Ypestis_CO92_447448_455086 Ypestis_Antiqua_4336998_4344636 1 2278 1 2278 2278 2278 99.96 2278 2279 100.00 99.96 Ypestis_CO92_4517763_4520040 Ypestis_Antiqua_4318947_4321225 1 14351 1 14351 14351 14351 99.99 41971 14351 34.19 100.00 Ypestis_CO92_4522004_4563974 Ypestis_Antiqua_4615125_4629475 14354 20942 1 6589 6589 6589 99.98 41971 27770 15.70 23.73 Ypestis_CO92_4522004_4563974 Ypestis_Antiqua_4631437_4659206 20918 41971 6717 27770 21054 21054 99.99 41971 27770 50.16 75.82 Ypestis_CO92_4522004_4563974 Ypestis_Antiqua_4631437_4659206 1 13623 13637 1 13623 13637 99.87 54344 13638 25.07 99.99 Ypestis_CO92_455256_509599 Ypestis_Antiqua_4323191_4336828 13631 54344 1 40713 40714 40713 99.99 54344 40858 74.92 99.65 Ypestis_CO92_455256_509599 Ypestis_Antiqua_4547124_4587981 1 16749 16747 1 16749 16747 99.98 24106 16748 69.48 99.99 Ypestis_CO92_4565717_4589822 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99.99 Ypestis_CO92_698196_716957 Ypestis_Antiqua_3476484_3495245 1 2860 2860 1 2860 2860 100.00 2861 2861 99.97 99.97 Ypestis_CO92_717138_719998 Ypestis_Antiqua_3473443_3476303 1 36382 36408 1 36382 36408 99.92 36384 36409 99.99 100.00 Ypestis_CO92_720367_756750 Ypestis_Antiqua_3436666_3473074 1 18776 18776 1 18776 18776 99.98 27096 18777 69.29 99.99 Ypestis_CO92_758198_785293 Ypestis_Antiqua_3417151_3435927 18774 21661 18636 15749 2888 2888 100.00 27096 18636 10.66 15.50 Ypestis_CO92_758198_785293 Ypestis_Antiqua_3396559_3415194 21649 27096 15707 10260 5448 5448 99.98 27096 18636 20.11 29.23 Ypestis_CO92_758198_785293 Ypestis_Antiqua_3396559_3415194 1 10260 10242 1 10260 10242 99.82 10261 18636 99.99 54.96 Ypestis_CO92_786022_796282 Ypestis_Antiqua_3396559_3415194 1 1332 1332 1 1332 1332 100.00 1333 1333 99.92 99.92 Ypestis_CO92_796664_797996 Ypestis_Antiqua_3394845_3396177 1 1107 1107 1 1107 1107 100.00 1108 1108 99.91 99.91 Ypestis_CO92_798377_799484 Ypestis_Antiqua_3393357_3394464 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