/users/252891/scratch/edge/database/yersinia/results/Ypestis_CO92_norepeats.fna /users/252891/scratch/edge/database/yersinia/results/Ypseudotuberculosis_IP_31758_norepeats.fna NUCMER [S1] [E1] [S2] [E2] [LEN 1] [LEN 2] [% IDY] [LEN R] [LEN Q] [COV R] [COV Q] [TAGS] 1 6451 6440 7 6451 6434 99.47 6451 6441 100.00 99.89 Ypestis_CO92_1003117_1009567 Ypseudotuberculosis_IP_31758_1029820_1036260 1 3759 7182 3424 3759 3759 99.60 3766 7186 99.81 52.31 Ypestis_CO92_1009744_1013509 Ypseudotuberculosis_IP_31758_1022283_1029468 1 3430 3413 1 3430 3413 98.69 3431 7186 99.97 47.50 Ypestis_CO92_1016182_1019612 Ypseudotuberculosis_IP_31758_1022283_1029468 1 32393 32446 1 32393 32446 98.27 44122 32446 73.42 100.00 Ypestis_CO92_1019783_1063904 Ypseudotuberculosis_IP_31758_989666_1022111 32500 37183 11755 7072 4684 4684 99.64 44122 11755 10.62 39.85 Ypestis_CO92_1019783_1063904 Ypseudotuberculosis_IP_31758_977681_989435 37187 44121 6960 1 6935 6960 98.86 44122 11755 15.72 59.21 Ypestis_CO92_1019783_1063904 Ypseudotuberculosis_IP_31758_977681_989435 1 1493 66538 68016 1493 1479 98.93 1493 114840 100.00 1.29 Ypestis_CO92_104085_105577 Ypseudotuberculosis_IP_31758_44504_159343 1 1621 1621 1 1621 1621 99.94 1622 1622 99.94 99.94 Ypestis_CO92_1066587_1068208 Ypseudotuberculosis_IP_31758_905765_907386 1 8021 43571 35625 8021 7947 96.36 8391 43572 95.59 18.24 Ypestis_CO92_1071581_1079971 Ypseudotuberculosis_IP_31758_858711_902282 5406 8296 2999 109 2891 2891 87.01 8391 2999 34.45 96.40 Ypestis_CO92_1071581_1079971 Ypseudotuberculosis_IP_31758_939530_942528 1 13162 68015 81185 13162 13171 99.39 19541 114840 67.36 11.47 Ypestis_CO92_107536_127076 Ypseudotuberculosis_IP_31758_44504_159343 13131 19541 81100 87502 6411 6403 99.45 19541 114840 32.81 5.58 Ypestis_CO92_107536_127076 Ypseudotuberculosis_IP_31758_44504_159343 1 20607 28494 7865 20607 20630 98.99 20607 43572 100.00 47.35 Ypestis_CO92_1086850_1107456 Ypseudotuberculosis_IP_31758_858711_902282 1 7681 53704 61390 7681 7687 97.65 36984 82033 20.77 9.37 Ypestis_CO92_1108940_1145923 Ypseudotuberculosis_IP_31758_719675_801707 7681 10941 62550 65775 3261 3226 92.56 36984 82033 8.82 3.93 Ypestis_CO92_1108940_1145923 Ypseudotuberculosis_IP_31758_719675_801707 12795 18121 67836 73177 5327 5342 94.76 36984 82033 14.40 6.51 Ypestis_CO92_1108940_1145923 Ypseudotuberculosis_IP_31758_719675_801707 13497 22269 70359 79145 8773 8787 95.55 36984 82033 23.72 10.71 Ypestis_CO92_1108940_1145923 Ypseudotuberculosis_IP_31758_719675_801707 22050 22414 81442 81802 365 361 90.16 36984 82033 0.99 0.44 Ypestis_CO92_1108940_1145923 Ypseudotuberculosis_IP_31758_719675_801707 23054 23513 79172 79631 460 460 85.22 36984 82033 1.24 0.56 Ypestis_CO92_1108940_1145923 Ypseudotuberculosis_IP_31758_719675_801707 23131 24193 80427 81490 1063 1064 87.82 36984 82033 2.87 1.30 Ypestis_CO92_1108940_1145923 Ypseudotuberculosis_IP_31758_719675_801707 27200 29773 998 3568 2574 2571 93.91 36984 40521 6.96 6.34 Ypestis_CO92_1108940_1145923 Ypseudotuberculosis_IP_31758_801811_842331 29733 36984 3981 11226 7252 7246 96.81 36984 40521 19.61 17.88 Ypestis_CO92_1108940_1145923 Ypseudotuberculosis_IP_31758_801811_842331 1 16920 8259 25193 16920 16935 99.70 16922 25193 99.99 67.22 Ypestis_CO92_1147889_1164810 Ypseudotuberculosis_IP_31758_1170409_1195601 2 121 44 163 120 120 98.33 121 163 99.17 73.62 Ypestis_CO92_1164890_1165010 Ypseudotuberculosis_IP_31758_1195822_1195984 1 4273 1 4284 4273 4284 98.86 7454 7503 57.32 57.10 Ypestis_CO92_1165091_1172544 Ypseudotuberculosis_IP_31758_1196065_1203567 4259 7454 4308 7503 3196 3196 99.91 7454 7503 42.88 42.60 Ypestis_CO92_1165091_1172544 Ypseudotuberculosis_IP_31758_1196065_1203567 1 4628 3 4630 4628 4628 99.61 4628 43783 100.00 10.57 Ypestis_CO92_1172722_1177349 Ypseudotuberculosis_IP_31758_1203743_1247525 1 39117 4664 43783 39117 39120 99.72 39117 43783 100.00 89.35 Ypestis_CO92_1178077_1217193 Ypseudotuberculosis_IP_31758_1203743_1247525 1 84 1 84 84 84 100.00 9455 75278 0.89 0.11 Ypestis_CO92_1222819_1232273 Ypseudotuberculosis_IP_31758_1253151_1328428 68 9455 145 9506 9388 9362 99.62 9455 75278 99.29 12.44 Ypestis_CO92_1222819_1232273 Ypseudotuberculosis_IP_31758_1253151_1328428 2 199 17992 17784 198 209 87.62 199 39718 99.50 0.53 Ypestis_CO92_1234244_1234442 Ypseudotuberculosis_IP_31758_3246644_3286361 1 17692 17701 1 17692 17701 99.84 27456 39718 64.44 44.57 Ypestis_CO92_1245590_1273045 Ypseudotuberculosis_IP_31758_3246644_3286361 17698 27455 9759 1 9758 9759 99.83 27456 9759 35.54 100.00 Ypestis_CO92_1245590_1273045 Ypseudotuberculosis_IP_31758_3236170_3245928 1 4833 124102 119252 4833 4851 99.36 4833 124604 100.00 3.89 Ypestis_CO92_1273227_1278059 Ypseudotuberculosis_IP_31758_3111179_3235782 1 27896 119240 91363 27896 27878 99.04 30006 124604 92.97 22.37 Ypestis_CO92_1280030_1310035 Ypseudotuberculosis_IP_31758_3111179_3235782 27817 30006 91318 89129 2190 2190 99.54 30006 124604 7.30 1.76 Ypestis_CO92_1280030_1310035 Ypseudotuberculosis_IP_31758_3111179_3235782 12 9940 9929 1 9929 9929 99.75 61407 9929 16.17 100.00 Ypestis_CO92_128641_190047 Ypseudotuberculosis_IP_31758_4476085_4486013 10193 22189 84940 72945 11997 11996 99.17 61407 84940 19.54 14.12 Ypestis_CO92_128641_190047 Ypseudotuberculosis_IP_31758_4390901_4475840 22137 61407 72897 33659 39271 39239 99.12 61407 84940 63.95 46.20 Ypestis_CO92_128641_190047 Ypseudotuberculosis_IP_31758_4390901_4475840 1 10347 89101 78718 10347 10384 99.08 10347 124604 100.00 8.33 Ypestis_CO92_1310774_1321120 Ypseudotuberculosis_IP_31758_3111179_3235782 1 48802 63087 14305 48802 48783 99.32 61471 124604 79.39 39.15 Ypestis_CO92_1321848_1383318 Ypseudotuberculosis_IP_31758_3111179_3235782 48788 61471 14281 1578 12684 12704 99.61 61471 124604 20.63 10.20 Ypestis_CO92_1321848_1383318 Ypseudotuberculosis_IP_31758_3111179_3235782 172 409 239 1 238 239 98.74 410 124604 58.05 0.19 Ypestis_CO92_1384056_1384465 Ypseudotuberculosis_IP_31758_3111179_3235782 1 13786 134249 120431 13786 13819 99.23 19279 134250 71.51 10.29 Ypestis_CO92_1384539_1403817 Ypseudotuberculosis_IP_31758_2976856_3111105 14091 19279 120482 115294 5189 5189 99.65 19279 134250 26.92 3.87 Ypestis_CO92_1384539_1403817 Ypseudotuberculosis_IP_31758_2976856_3111105 1 9769 115107 105341 9769 9767 99.36 9769 134250 100.00 7.28 Ypestis_CO92_1403989_1413757 Ypseudotuberculosis_IP_31758_2976856_3111105 1 1477 105222 103746 1477 1477 99.46 1477 134250 100.00 1.10 Ypestis_CO92_1413876_1415352 Ypseudotuberculosis_IP_31758_2976856_3111105 1 4178 103251 99074 4178 4178 99.52 4178 134250 100.00 3.11 Ypestis_CO92_1415847_1420024 Ypseudotuberculosis_IP_31758_2976856_3111105 1 81972 99049 16898 81972 82152 99.22 81972 134250 100.00 61.19 Ypestis_CO92_1420759_1502730 Ypseudotuberculosis_IP_31758_2976856_3111105 1 725 16886 16163 725 724 99.59 16976 134250 4.27 0.54 Ypestis_CO92_1504701_1521676 Ypseudotuberculosis_IP_31758_2976856_3111105 768 6818 16169 10116 6051 6054 99.29 16976 134250 35.64 4.51 Ypestis_CO92_1504701_1521676 Ypseudotuberculosis_IP_31758_2976856_3111105 6836 16975 10140 1 10140 10140 99.64 16976 134250 59.73 7.55 Ypestis_CO92_1504701_1521676 Ypseudotuberculosis_IP_31758_2976856_3111105 1 16002 74375 58360 16002 16016 99.41 16002 74389 100.00 21.53 Ypestis_CO92_1521771_1537772 Ypseudotuberculosis_IP_31758_2902292_2976680 1 54538 58341 3724 54538 54618 99.35 54538 74389 100.00 73.42 Ypestis_CO92_1538501_1593038 Ypseudotuberculosis_IP_31758_2902292_2976680 1 3700 3700 1 3700 3700 99.84 3700 74389 100.00 4.97 Ypestis_CO92_1593772_1597471 Ypseudotuberculosis_IP_31758_2902292_2976680 2 9447 26161 16718 9446 9444 99.31 21051 26161 44.87 36.10 Ypestis_CO92_1597647_1618697 Ypseudotuberculosis_IP_31758_2875955_2902115 9413 21051 16707 5069 11639 11639 99.79 21051 26161 55.29 44.49 Ypestis_CO92_1597647_1618697 Ypseudotuberculosis_IP_31758_2875955_2902115 1 974 5042 4069 974 974 99.59 974 26161 100.00 3.72 Ypestis_CO92_1619435_1620408 Ypseudotuberculosis_IP_31758_2875955_2902115 1 4055 4058 4 4055 4055 99.95 4055 26161 100.00 15.50 Ypestis_CO92_1622378_1626432 Ypseudotuberculosis_IP_31758_2875955_2902115 1 1222 41314 40093 1222 1222 100.00 28780 41336 4.25 2.96 Ypestis_CO92_1627177_1655956 Ypseudotuberculosis_IP_31758_2833900_2875235 1214 14569 38763 25340 13356 13424 99.25 28780 41336 46.41 32.48 Ypestis_CO92_1627177_1655956 Ypseudotuberculosis_IP_31758_2833900_2875235 14891 28780 25339 11451 13890 13889 99.82 28780 41336 48.26 33.60 Ypestis_CO92_1627177_1655956 Ypseudotuberculosis_IP_31758_2833900_2875235 112 276 1 164 165 164 92.12 4661 2999 3.54 5.47 Ypestis_CO92_1662841_1667501 Ypseudotuberculosis_IP_31758_939530_942528 346 4660 4315 1 4315 4315 96.41 4661 41336 92.58 10.44 Ypestis_CO92_1662841_1667501 Ypseudotuberculosis_IP_31758_2833900_2875235 1 3441 96822 93382 3441 3441 99.85 24293 96823 14.16 3.55 Ypestis_CO92_1669628_1693920 Ypseudotuberculosis_IP_31758_2734951_2831773 3994 11682 93388 85699 7689 7690 98.86 24293 96823 31.65 7.94 Ypestis_CO92_1669628_1693920 Ypseudotuberculosis_IP_31758_2734951_2831773 7001 18875 3880 15778 11875 11899 91.08 24293 28176 48.88 42.23 Ypestis_CO92_1669628_1693920 Ypseudotuberculosis_IP_31758_949409_977584 15032 24293 78472 69222 9262 9251 97.45 24293 96823 38.13 9.55 Ypestis_CO92_1669628_1693920 Ypseudotuberculosis_IP_31758_2734951_2831773 1 31193 69215 38030 31193 31186 99.48 31193 96823 100.00 32.21 Ypestis_CO92_1695250_1726442 Ypseudotuberculosis_IP_31758_2734951_2831773 1 7132 38013 30882 7132 7132 99.83 37940 96823 18.80 7.37 Ypestis_CO92_1729129_1767068 Ypseudotuberculosis_IP_31758_2734951_2831773 7093 37928 30869 1 30836 30869 98.97 37940 96823 81.28 31.88 Ypestis_CO92_1729129_1767068 Ypseudotuberculosis_IP_31758_2734951_2831773 1 348 1 348 348 348 99.43 348 351 100.00 99.15 Ypestis_CO92_17486_17833 Ypseudotuberculosis_IP_31758_17221_17571 68 6700 30435 23802 6633 6634 98.62 10624 30435 62.43 21.80 Ypestis_CO92_1767156_1777779 Ypseudotuberculosis_IP_31758_2704337_2734771 6499 10624 22623 18498 4126 4126 96.81 10624 30435 38.84 13.56 Ypestis_CO92_1767156_1777779 Ypseudotuberculosis_IP_31758_2704337_2734771 1 18440 18502 48 18440 18455 99.56 18474 30435 99.82 60.64 Ypestis_CO92_1779098_1797571 Ypseudotuberculosis_IP_31758_2704337_2734771 1 9317 10910 1608 9317 9303 99.59 9317 10911 100.00 85.26 Ypestis_CO92_1797676_1806992 Ypseudotuberculosis_IP_31758_2693319_2704229 1 3092 51187 54278 3092 3092 99.68 3092 172401 100.00 1.79 Ypestis_CO92_1808313_1811404 Ypseudotuberculosis_IP_31758_1771639_1944039 1 5285 54282 59551 5285 5270 98.57 5285 172401 100.00 3.06 Ypestis_CO92_1812731_1818015 Ypseudotuberculosis_IP_31758_1771639_1944039 1 6986 59574 66560 6986 6987 99.63 6986 172401 100.00 4.05 Ypestis_CO92_1818748_1825733 Ypseudotuberculosis_IP_31758_1771639_1944039 2 1145 66578 67720 1144 1143 96.50 1145 172401 99.91 0.66 Ypestis_CO92_1826462_1827606 Ypseudotuberculosis_IP_31758_1771639_1944039 1 5354 67719 73071 5354 5353 98.34 5354 172401 100.00 3.10 Ypestis_CO92_1827777_1833130 Ypseudotuberculosis_IP_31758_1771639_1944039 1 7077 73091 80167 7077 7077 99.56 8565 172401 82.63 4.10 Ypestis_CO92_1833861_1842425 Ypseudotuberculosis_IP_31758_1771639_1944039 7028 8565 80244 81778 1538 1535 99.35 8565 172401 17.96 0.89 Ypestis_CO92_1833861_1842425 Ypseudotuberculosis_IP_31758_1771639_1944039 1 278 81775 82052 278 278 100.00 279 172401 99.64 0.16 Ypestis_CO92_1843745_1844023 Ypseudotuberculosis_IP_31758_1771639_1944039 1 52589 82053 134627 52589 52575 99.00 58495 172401 89.90 30.50 Ypestis_CO92_1845983_1904477 Ypseudotuberculosis_IP_31758_1771639_1944039 128 22265 134845 156953 22138 22109 98.70 22265 172401 99.43 12.82 Ypestis_CO92_1906606_1928870 Ypseudotuberculosis_IP_31758_1771639_1944039 1 6822 6 6837 6822 6832 99.69 6822 25453 100.00 26.84 Ypestis_CO92_19154_25975 Ypseudotuberculosis_IP_31758_18884_44336 1 716 33652 32937 716 716 99.02 716 84940 100.00 0.84 Ypestis_CO92_192013_192728 Ypseudotuberculosis_IP_31758_4390901_4475840 4 26768 32936 6200 26765 26737 99.23 26768 84940 99.99 31.48 Ypestis_CO92_192907_219674 Ypseudotuberculosis_IP_31758_4390901_4475840 1 4997 156954 161951 4997 4998 99.70 41281 172401 12.10 2.90 Ypestis_CO92_1930830_1972110 Ypseudotuberculosis_IP_31758_1771639_1944039 5077 15564 161912 172401 10488 10490 99.77 41281 172401 25.41 6.08 Ypestis_CO92_1930830_1972110 Ypseudotuberculosis_IP_31758_1771639_1944039 15576 41281 1 25739 25706 25739 99.31 41281 49316 62.27 52.19 Ypestis_CO92_1930830_1972110 Ypseudotuberculosis_IP_31758_1944762_1994077 1 1245 1604 360 1245 1245 99.84 1245 10911 100.00 11.41 Ypestis_CO92_1973434_1974678 Ypseudotuberculosis_IP_31758_2693319_2704229 1 343 358 1 343 358 95.25 15915 10911 2.16 3.28 Ypestis_CO92_1976639_1992553 Ypseudotuberculosis_IP_31758_2693319_2704229 445 15915 72361 56873 15471 15489 99.66 15915 72361 97.21 21.41 Ypestis_CO92_1976639_1992553 Ypseudotuberculosis_IP_31758_2620857_2693217 1 14951 56868 41827 14951 15042 98.73 45052 72361 33.19 20.79 Ypestis_CO92_1994517_2039568 Ypseudotuberculosis_IP_31758_2620857_2693217 14941 45052 41768 11606 30112 30163 99.40 45052 72361 66.84 41.68 Ypestis_CO92_1994517_2039568 Ypseudotuberculosis_IP_31758_2620857_2693217 1 250 24320 24568 250 249 97.60 11817 24568 2.12 1.01 Ypestis_CO92_1_11817 Ypseudotuberculosis_IP_31758_4698739_4723307 251 11817 1 11552 11567 11552 99.74 11817 11552 97.88 100.00 Ypestis_CO92_1_11817 Ypseudotuberculosis_IP_31758_1_11552 1 7705 11576 3872 7705 7705 99.11 11325 72361 68.04 10.65 Ypestis_CO92_2040309_2051633 Ypseudotuberculosis_IP_31758_2620857_2693217 7704 11321 3618 1 3618 3618 99.78 11325 72361 31.95 5.00 Ypestis_CO92_2040309_2051633 Ypseudotuberculosis_IP_31758_2620857_2693217 6 25427 41019 15578 25422 25442 99.35 40865 41065 62.21 61.96 Ypestis_CO92_2052326_2093190 Ypseudotuberculosis_IP_31758_2579316_2620380 25398 40864 15479 1 15467 15479 99.31 40865 41065 37.85 37.69 Ypestis_CO92_2052326_2093190 Ypseudotuberculosis_IP_31758_2579316_2620380 3 1120 21735 20619 1118 1117 99.73 21671 21735 5.16 5.14 Ypestis_CO92_2093362_2115032 Ypseudotuberculosis_IP_31758_2557407_2579141 1090 21669 20601 1 20580 20601 99.53 21671 21735 94.97 94.78 Ypestis_CO92_2093362_2115032 Ypseudotuberculosis_IP_31758_2557407_2579141 1 165 165 1 165 165 100.00 20345 166 0.81 99.40 Ypestis_CO92_2115110_2135454 Ypseudotuberculosis_IP_31758_2557163_2557328 352 1101 12182 11431 750 752 96.54 20345 12246 3.69 6.14 Ypestis_CO92_2115110_2135454 Ypseudotuberculosis_IP_31758_2544796_2557041 1097 2373 6748 5467 1277 1282 97.82 20345 12246 6.28 10.47 Ypestis_CO92_2115110_2135454 Ypseudotuberculosis_IP_31758_2544796_2557041 2374 3421 5078 4069 1048 1010 94.10 20345 12246 5.15 8.25 Ypestis_CO92_2115110_2135454 Ypseudotuberculosis_IP_31758_2544796_2557041 5037 10492 5437 1 5456 5437 99.01 20345 12467 26.82 43.61 Ypestis_CO92_2115110_2135454 Ypseudotuberculosis_IP_31758_2503740_2516206 12178 19813 7637 1 7636 7637 98.49 20345 7637 37.53 100.00 Ypestis_CO92_2115110_2135454 Ypseudotuberculosis_IP_31758_2494418_2502054 1 5292 30161 24865 5292 5297 99.51 30029 30162 17.62 17.56 Ypestis_CO92_2171392_2201420 Ypseudotuberculosis_IP_31758_2464149_2494310 5285 30024 24785 1 24740 24785 99.26 30029 30162 82.39 82.17 Ypestis_CO92_2171392_2201420 Ypseudotuberculosis_IP_31758_2464149_2494310 1 34672 86612 51878 34672 34735 99.43 34672 86613 100.00 40.10 Ypestis_CO92_2201591_2236262 Ypseudotuberculosis_IP_31758_2377362_2463974 1 6160 6160 1 6160 6160 99.89 25302 84940 24.35 7.25 Ypestis_CO92_220424_245725 Ypseudotuberculosis_IP_31758_4390901_4475840 6164 25302 19334 196 19139 19139 99.97 25302 19334 75.64 98.99 Ypestis_CO92_220424_245725 Ypseudotuberculosis_IP_31758_4370853_4390186 1 291 51879 51588 291 292 99.32 19017 86613 1.53 0.34 Ypestis_CO92_2238218_2257234 Ypseudotuberculosis_IP_31758_2377362_2463974 337 19017 51228 32541 18681 18688 99.16 19017 86613 98.23 21.58 Ypestis_CO92_2238218_2257234 Ypseudotuberculosis_IP_31758_2377362_2463974 1 17832 32544 14712 17832 17833 99.65 34949 86613 51.02 20.59 Ypestis_CO92_2258554_2293502 Ypseudotuberculosis_IP_31758_2377362_2463974 20303 21672 14712 13343 1370 1370 99.64 34949 86613 3.92 1.58 Ypestis_CO92_2258554_2293502 Ypseudotuberculosis_IP_31758_2377362_2463974 21665 34948 13284 1 13284 13284 99.52 34949 86613 38.01 15.34 Ypestis_CO92_2258554_2293502 Ypseudotuberculosis_IP_31758_2377362_2463974 1 439 2549 2111 439 439 99.77 439 2581 100.00 17.01 Ypestis_CO92_2294422_2294860 Ypseudotuberculosis_IP_31758_2374603_2377183 1 2099 2107 1 2099 2107 97.41 2100 2581 99.95 81.64 Ypestis_CO92_2296823_2298922 Ypseudotuberculosis_IP_31758_2374603_2377183 1 4867 7556 2690 4867 4867 99.49 4867 7557 100.00 64.40 Ypestis_CO92_2299015_2303881 Ypseudotuberculosis_IP_31758_2366954_2374510 1 2728 2677 1 2728 2677 97.80 2729 7557 99.96 35.42 Ypestis_CO92_2304604_2307332 Ypseudotuberculosis_IP_31758_2366954_2374510 1 8551 35186 26601 8551 8586 98.84 23146 35187 36.94 24.40 Ypestis_CO92_2307425_2330570 Ypseudotuberculosis_IP_31758_2331675_2366861 8740 12992 26519 22261 4253 4259 85.25 23146 35187 18.37 12.10 Ypestis_CO92_2307425_2330570 Ypseudotuberculosis_IP_31758_2331675_2366861 15646 23146 19566 12123 7501 7444 98.44 23146 35187 32.41 21.16 Ypestis_CO92_2307425_2330570 Ypseudotuberculosis_IP_31758_2331675_2366861 1 11722 11783 1 11722 11783 99.14 11736 35187 99.88 33.49 Ypestis_CO92_2331034_2342769 Ypseudotuberculosis_IP_31758_2331675_2366861 5 10944 10913 1 10940 10913 99.52 10945 10913 99.95 100.00 Ypestis_CO92_2342939_2353883 Ypseudotuberculosis_IP_31758_2320580_2331492 1 8990 44701 35712 8990 8990 99.86 10235 44702 87.84 20.11 Ypestis_CO92_2354001_2364235 Ypseudotuberculosis_IP_31758_2275761_2320462 116 35754 35742 98 35639 35645 99.52 35754 44702 99.68 79.74 Ypestis_CO92_2404569_2440322 Ypseudotuberculosis_IP_31758_2275761_2320462 4 209 5915 5711 206 205 98.54 209 5915 98.56 3.47 Ypestis_CO92_2440851_2441059 Ypseudotuberculosis_IP_31758_2269608_2275522 1 5716 5716 1 5716 5716 99.91 7818 5915 73.11 96.64 Ypestis_CO92_2442377_2450194 Ypseudotuberculosis_IP_31758_2269608_2275522 5728 7818 16291 14192 2091 2100 99.57 7818 16291 26.75 12.89 Ypestis_CO92_2442377_2450194 Ypseudotuberculosis_IP_31758_2252596_2268886 1 14147 14185 1 14147 14185 99.53 14148 16291 99.99 87.07 Ypestis_CO92_2452160_2466307 Ypseudotuberculosis_IP_31758_2252596_2268886 1 3692 147328 143604 3692 3725 98.18 3692 147329 100.00 2.53 Ypestis_CO92_2466482_2470173 Ypseudotuberculosis_IP_31758_2105093_2252421 1 48969 143608 94628 48969 48981 99.07 116867 147329 41.90 33.25 Ypestis_CO92_2471492_2588358 Ypseudotuberculosis_IP_31758_2105093_2252421 48801 54645 94562 88718 5845 5845 99.54 116867 147329 5.00 3.97 Ypestis_CO92_2471492_2588358 Ypseudotuberculosis_IP_31758_2105093_2252421 54645 69670 88629 73548 15026 15082 99.00 116867 147329 12.86 10.24 Ypestis_CO92_2471492_2588358 Ypseudotuberculosis_IP_31758_2105093_2252421 70437 82502 69368 57344 12066 12025 99.24 116867 147329 10.32 8.16 Ypestis_CO92_2471492_2588358 Ypseudotuberculosis_IP_31758_2105093_2252421 82500 82687 48757 48570 188 188 97.34 116867 147329 0.16 0.13 Ypestis_CO92_2471492_2588358 Ypseudotuberculosis_IP_31758_2105093_2252421 91391 91801 48608 48176 411 433 93.32 116867 147329 0.35 0.29 Ypestis_CO92_2471492_2588358 Ypseudotuberculosis_IP_31758_2105093_2252421 91800 94153 45387 43034 2354 2354 99.75 116867 147329 2.01 1.60 Ypestis_CO92_2471492_2588358 Ypseudotuberculosis_IP_31758_2105093_2252421 94153 96684 38643 36112 2532 2532 99.61 116867 147329 2.17 1.72 Ypestis_CO92_2471492_2588358 Ypseudotuberculosis_IP_31758_2105093_2252421 96676 108600 35308 23339 11925 11970 99.15 116867 147329 10.20 8.12 Ypestis_CO92_2471492_2588358 Ypseudotuberculosis_IP_31758_2105093_2252421 108584 116867 23310 14993 8284 8318 99.06 116867 147329 7.09 5.65 Ypestis_CO92_2471492_2588358 Ypseudotuberculosis_IP_31758_2105093_2252421 1 25894 25948 1 25894 25948 98.88 25895 26872 100.00 96.56 Ypestis_CO92_247683_273577 Ypseudotuberculosis_IP_31758_4296556_4323427 1 10575 15004 4431 10575 10574 99.68 10575 147329 100.00 7.18 Ypestis_CO92_2588531_2599105 Ypseudotuberculosis_IP_31758_2105093_2252421 1 4420 4421 2 4420 4420 99.34 4420 147329 100.00 3.00 Ypestis_CO92_2599826_2604245 Ypseudotuberculosis_IP_31758_2105093_2252421 1 32667 58940 26143 32667 32798 99.27 32667 58941 100.00 55.65 Ypestis_CO92_2604424_2637090 Ypseudotuberculosis_IP_31758_2045976_2104916 1 8418 26123 17704 8418 8420 99.68 8418 58941 100.00 14.29 Ypestis_CO92_2637821_2646238 Ypseudotuberculosis_IP_31758_2045976_2104916 1 11056 17685 6627 11056 11059 99.54 11056 58941 100.00 18.76 Ypestis_CO92_2646967_2658022 Ypseudotuberculosis_IP_31758_2045976_2104916 1 6624 6624 1 6624 6624 99.70 17657 58941 37.51 11.24 Ypestis_CO92_2659984_2677640 Ypseudotuberculosis_IP_31758_2045976_2104916 6633 13062 8436 1985 6430 6452 99.26 17657 8436 36.42 76.48 Ypestis_CO92_2659984_2677640 Ypseudotuberculosis_IP_31758_2036822_2045257 16321 17651 1331 1 1331 1331 99.77 17657 8436 7.54 15.78 Ypestis_CO92_2659984_2677640 Ypseudotuberculosis_IP_31758_2036822_2045257 1 12565 6853 19417 12565 12565 99.82 12565 25453 100.00 49.37 Ypestis_CO92_26702_39266 Ypseudotuberculosis_IP_31758_18884_44336 1 10960 10958 1 10960 10958 99.06 10961 10960 99.99 99.98 Ypestis_CO92_2677816_2688776 Ypseudotuberculosis_IP_31758_2025681_2036640 1 2565 30447 27884 2565 2564 99.96 2565 30675 100.00 8.36 Ypestis_CO92_2688988_2691552 Ypseudotuberculosis_IP_31758_1994795_2025469 1 373 27847 27475 373 373 99.73 373 30675 100.00 1.22 Ypestis_CO92_2692300_2692672 Ypseudotuberculosis_IP_31758_1994795_2025469 1 27380 27469 1 27380 27469 99.10 50889 30675 53.80 89.55 Ypestis_CO92_2694637_2745525 Ypseudotuberculosis_IP_31758_1994795_2025469 27387 50763 49316 25940 23377 23377 99.80 50889 49316 45.94 47.40 Ypestis_CO92_2694637_2745525 Ypseudotuberculosis_IP_31758_1944762_1994077 50706 50889 25917 25734 184 184 98.91 50889 49316 0.36 0.37 Ypestis_CO92_2694637_2745525 Ypseudotuberculosis_IP_31758_1944762_1994077 1 26642 37270 10618 26642 26653 99.54 26642 37271 100.00 71.51 Ypestis_CO92_273751_300392 Ypseudotuberculosis_IP_31758_4259115_4296385 1 6203 51193 45021 6203 6173 99.39 38065 172401 16.30 3.58 Ypestis_CO92_2746842_2784906 Ypseudotuberculosis_IP_31758_1771639_1944039 6202 16883 32553 21873 10682 10681 99.21 38065 172401 28.06 6.20 Ypestis_CO92_2746842_2784906 Ypseudotuberculosis_IP_31758_1771639_1944039 17195 17409 21561 21347 215 215 99.07 38065 172401 0.56 0.12 Ypestis_CO92_2746842_2784906 Ypseudotuberculosis_IP_31758_1771639_1944039 17829 22961 21179 16047 5133 5133 95.95 38065 172401 13.48 2.98 Ypestis_CO92_2746842_2784906 Ypseudotuberculosis_IP_31758_1771639_1944039 22633 38065 15411 3 15433 15409 98.80 38065 172401 40.54 8.94 Ypestis_CO92_2746842_2784906 Ypseudotuberculosis_IP_31758_1771639_1944039 1637 2020 395 12 384 384 85.68 2022 1394 18.99 27.55 Ypestis_CO92_2785155_2787176 Ypseudotuberculosis_IP_31758_611897_613290 332 692 362 2 361 361 98.61 12504 362 2.89 99.72 Ypestis_CO92_2792062_2804565 Ypseudotuberculosis_IP_31758_1767371_1767732 946 12503 11570 1 11558 11570 98.87 12504 11573 92.43 99.97 Ypestis_CO92_2792062_2804565 Ypseudotuberculosis_IP_31758_1755549_1767121 1 2342 2342 1 2342 2342 99.15 21426 2343 10.93 99.96 Ypestis_CO92_2804747_2826172 Ypseudotuberculosis_IP_31758_1753025_1755367 2339 8828 19327 12804 6490 6524 98.90 21426 19327 30.29 33.76 Ypestis_CO92_2804747_2826172 Ypseudotuberculosis_IP_31758_1733577_1752903 10248 21426 11282 104 11179 11179 98.94 21426 19327 52.17 57.84 Ypestis_CO92_2804747_2826172 Ypseudotuberculosis_IP_31758_1733577_1752903 1 96 99 4 96 96 100.00 104 19327 92.31 0.50 Ypestis_CO92_2828136_2828239 Ypseudotuberculosis_IP_31758_1733577_1752903 5 2239 2263 1 2235 2263 97.30 2241 2263 99.73 100.00 Ypestis_CO92_2828410_2830650 Ypseudotuberculosis_IP_31758_1731135_1733397 1 13267 18553 5278 13267 13276 98.92 15478 18554 85.72 71.55 Ypestis_CO92_2830827_2846304 Ypseudotuberculosis_IP_31758_1712404_1730957 13736 13924 5277 5089 189 189 97.35 15478 18554 1.22 1.02 Ypestis_CO92_2830827_2846304 Ypseudotuberculosis_IP_31758_1712404_1730957 15111 15478 5089 4722 368 368 99.46 15478 18554 2.38 1.98 Ypestis_CO92_2830827_2846304 Ypseudotuberculosis_IP_31758_1712404_1730957 1 4731 4730 1 4731 4730 98.86 4736 18554 99.89 25.49 Ypestis_CO92_2846479_2851214 Ypseudotuberculosis_IP_31758_1712404_1730957 1 23639 32351 8702 23639 23650 98.94 31878 32352 74.15 73.10 Ypestis_CO92_2851392_2883269 Ypseudotuberculosis_IP_31758_1679871_1712222 23638 31876 8331 1 8239 8331 98.27 31878 32352 25.85 25.75 Ypestis_CO92_2851392_2883269 Ypseudotuberculosis_IP_31758_1679871_1712222 1 2323 25045 22723 2323 2323 99.61 2323 25046 100.00 9.27 Ypestis_CO92_2883444_2885766 Ypseudotuberculosis_IP_31758_1654650_1679695 1 7261 72155 64877 7261 7279 98.91 59013 79953 12.30 9.10 Ypestis_CO92_2887092_2946104 Ypseudotuberculosis_IP_31758_3286911_3366863 8495 41286 64753 31999 32792 32755 98.61 59013 79953 55.57 40.97 Ypestis_CO92_2887092_2946104 Ypseudotuberculosis_IP_31758_3286911_3366863 41262 59012 17802 1 17751 17802 99.37 59013 79953 30.08 22.27 Ypestis_CO92_2887092_2946104 Ypseudotuberculosis_IP_31758_3286911_3366863 101 218 118 1 118 118 100.00 219 118 53.88 100.00 Ypestis_CO92_2946191_2946409 Ypseudotuberculosis_IP_31758_3286448_3286565 1 9050 39717 30669 9050 9049 99.61 9050 39718 100.00 22.78 Ypestis_CO92_2946496_2955545 Ypseudotuberculosis_IP_31758_3246644_3286361 1 12588 30650 17999 12588 12652 98.98 12588 39718 100.00 31.85 Ypestis_CO92_2956274_2968861 Ypseudotuberculosis_IP_31758_3246644_3286361 1 763 9516 10278 763 763 100.00 763 75278 100.00 1.01 Ypestis_CO92_2970824_2971586 Ypseudotuberculosis_IP_31758_1253151_1328428 1 10518 10282 20783 10518 10502 99.41 10518 75278 100.00 13.95 Ypestis_CO92_2971759_2982276 Ypseudotuberculosis_IP_31758_1253151_1328428 1 1059 20776 21834 1059 1059 99.24 53742 75278 1.97 1.41 Ypestis_CO92_2983592_3037333 Ypseudotuberculosis_IP_31758_1253151_1328428 1157 13957 21834 34642 12801 12809 99.29 53742 75278 23.82 17.02 Ypestis_CO92_2983592_3037333 Ypseudotuberculosis_IP_31758_1253151_1328428 13936 29943 34808 50805 16008 15998 99.23 53742 75278 29.79 21.25 Ypestis_CO92_2983592_3037333 Ypseudotuberculosis_IP_31758_1253151_1328428 29774 53742 51274 75278 23969 24005 99.30 53742 75278 44.60 31.89 Ypestis_CO92_2983592_3037333 Ypseudotuberculosis_IP_31758_1253151_1328428 1 10598 10589 1 10598 10589 99.51 10599 37271 99.99 28.41 Ypestis_CO92_301132_311730 Ypseudotuberculosis_IP_31758_4259115_4296385 1 11422 1 11422 11422 11422 99.89 11424 52163 99.98 21.90 Ypestis_CO92_3037508_3048931 Ypseudotuberculosis_IP_31758_1328603_1380765 1 13082 2971 16128 13082 13158 99.29 22673 25585 57.70 51.43 Ypestis_CO92_3068468_3091140 Ypseudotuberculosis_IP_31758_1626262_1651846 13221 22673 16133 25585 9453 9453 99.80 22673 25585 41.69 36.95 Ypestis_CO92_3068468_3091140 Ypseudotuberculosis_IP_31758_1626262_1651846 3 2447 1 2444 2445 2444 99.02 6979 2444 35.03 100.00 Ypestis_CO92_3091322_3098300 Ypseudotuberculosis_IP_31758_1652030_1654473 2438 6979 1 4500 4542 4500 97.82 6979 25046 65.08 17.97 Ypestis_CO92_3091322_3098300 Ypseudotuberculosis_IP_31758_1654650_1679695 1 15619 4517 20146 15619 15630 99.34 18226 25046 85.70 62.41 Ypestis_CO92_3099028_3117253 Ypseudotuberculosis_IP_31758_1654650_1679695 15619 18226 20110 22717 2608 2608 99.92 18226 25046 14.31 10.41 Ypestis_CO92_3099028_3117253 Ypseudotuberculosis_IP_31758_1654650_1679695 1 3914 72152 76072 3914 3921 98.90 8429 79953 46.43 4.90 Ypestis_CO92_3118577_3127005 Ypseudotuberculosis_IP_31758_3286911_3366863 4020 8429 75536 79953 4410 4418 97.69 8429 79953 52.32 5.53 Ypestis_CO92_3118577_3127005 Ypseudotuberculosis_IP_31758_3286911_3366863 1 115 115 1 115 115 100.00 146 116 78.77 99.14 Ypestis_CO92_311911_312056 Ypseudotuberculosis_IP_31758_4258819_4258934 3 1285 1 1267 1283 1267 98.52 1285 41745 99.84 3.04 Ypestis_CO92_3127176_3128460 Ypseudotuberculosis_IP_31758_3367036_3408780 1 10642 3250 13888 10642 10639 99.08 10642 41745 100.00 25.49 Ypestis_CO92_3129779_3140420 Ypseudotuberculosis_IP_31758_3367036_3408780 23 20145 20154 1 20123 20154 99.44 34568 20229 58.21 99.63 Ypestis_CO92_314185_348752 Ypseudotuberculosis_IP_31758_4236458_4256686 20281 34568 19160 4883 14288 14278 99.25 34568 19160 41.33 74.52 Ypestis_CO92_314185_348752 Ypseudotuberculosis_IP_31758_4217022_4236181 1 665 13895 14559 665 665 100.00 10711 41745 6.21 1.59 Ypestis_CO92_3142386_3153096 Ypseudotuberculosis_IP_31758_3367036_3408780 725 10711 15639 25637 9987 9999 99.47 10711 41745 93.24 23.95 Ypestis_CO92_3142386_3153096 Ypseudotuberculosis_IP_31758_3367036_3408780 1 944 48073 47130 944 944 99.36 44403 90289 2.13 1.05 Ypestis_CO92_3153820_3198222 Ypseudotuberculosis_IP_31758_1409895_1500183 909 13908 47127 34095 13000 13033 99.21 44403 90289 29.28 14.43 Ypestis_CO92_3153820_3198222 Ypseudotuberculosis_IP_31758_1409895_1500183 13897 43597 34053 4256 29701 29798 98.82 44403 90289 66.89 33.00 Ypestis_CO92_3153820_3198222 Ypseudotuberculosis_IP_31758_1409895_1500183 43600 44403 3351 2539 804 813 93.36 44403 90289 1.81 0.90 Ypestis_CO92_3153820_3198222 Ypseudotuberculosis_IP_31758_1409895_1500183 1 1577 2522 951 1577 1572 96.70 2972 90289 53.06 1.74 Ypestis_CO92_3199543_3202514 Ypseudotuberculosis_IP_31758_1409895_1500183 1372 2972 1610 15 1601 1596 92.03 2972 90289 53.87 1.77 Ypestis_CO92_3199543_3202514 Ypseudotuberculosis_IP_31758_1409895_1500183 23 20429 28617 8131 20407 20487 97.76 28467 28617 71.69 71.59 Ypestis_CO92_3203392_3231858 Ypseudotuberculosis_IP_31758_1380947_1409563 21093 22566 7479 6066 1474 1414 86.77 28467 28617 5.18 4.94 Ypestis_CO92_3203392_3231858 Ypseudotuberculosis_IP_31758_1380947_1409563 22231 25657 6077 2651 3427 3427 95.65 28467 28617 12.04 11.98 Ypestis_CO92_3203392_3231858 Ypseudotuberculosis_IP_31758_1380947_1409563 25855 26664 2453 1644 810 810 94.94 28467 28617 2.85 2.83 Ypestis_CO92_3203392_3231858 Ypseudotuberculosis_IP_31758_1380947_1409563 26677 28466 1793 1 1790 1793 97.44 28467 28617 6.29 6.27 Ypestis_CO92_3203392_3231858 Ypseudotuberculosis_IP_31758_1380947_1409563 1 10585 52162 41630 10585 10533 98.93 10585 52163 100.00 20.19 Ypestis_CO92_3232040_3242624 Ypseudotuberculosis_IP_31758_1328603_1380765 1 16282 41611 25301 16282 16311 99.25 16282 52163 100.00 31.27 Ypestis_CO92_3243353_3259634 Ypseudotuberculosis_IP_31758_1328603_1380765 1 2739 25279 22525 2739 2755 98.66 2739 52163 100.00 5.28 Ypestis_CO92_3260368_3263106 Ypseudotuberculosis_IP_31758_1328603_1380765 1 9803 22538 12718 9803 9821 99.40 9803 52163 100.00 18.83 Ypestis_CO92_3263279_3273081 Ypseudotuberculosis_IP_31758_1328603_1380765 1 1265 12698 11434 1265 1265 99.76 1265 52163 100.00 2.43 Ypestis_CO92_3273811_3275075 Ypseudotuberculosis_IP_31758_1328603_1380765 2891 7455 35607 31035 4565 4573 98.27 7455 35607 61.23 12.84 Ypestis_CO92_3277047_3284501 Ypseudotuberculosis_IP_31758_1570145_1605751 1 25225 31039 5805 25225 25235 97.98 30949 35607 81.51 70.87 Ypestis_CO92_3285820_3316768 Ypseudotuberculosis_IP_31758_1570145_1605751 25415 30948 5534 1 5534 5534 97.47 30949 35607 17.88 15.54 Ypestis_CO92_3285820_3316768 Ypseudotuberculosis_IP_31758_1570145_1605751 1 15134 15148 1 15134 15148 99.39 15485 15149 97.73 99.99 Ypestis_CO92_3317135_3332619 Ypseudotuberculosis_IP_31758_1554506_1569654 15138 15412 587 313 275 275 99.64 15485 587 1.78 46.85 Ypestis_CO92_3317135_3332619 Ypseudotuberculosis_IP_31758_1553733_1554319 15311 15482 172 1 172 172 98.84 15485 587 1.11 29.30 Ypestis_CO92_3317135_3332619 Ypseudotuberculosis_IP_31758_1553733_1554319 1 197 197 1 197 197 99.49 198 198 99.49 99.49 Ypestis_CO92_3332698_3332895 Ypseudotuberculosis_IP_31758_1553455_1553652 1 158 158 1 158 158 100.00 159 159 99.37 99.37 Ypestis_CO92_3332969_3333127 Ypseudotuberculosis_IP_31758_1553223_1553381 1 1716 1922 207 1716 1716 99.88 1716 1923 100.00 89.24 Ypestis_CO92_3333201_3334916 Ypseudotuberculosis_IP_31758_1551227_1553149 1 170 170 1 170 170 99.41 171 1923 99.42 8.84 Ypestis_CO92_3335663_3335833 Ypseudotuberculosis_IP_31758_1551227_1553149 1 78 78 1 78 78 100.00 79 79 98.73 98.73 Ypestis_CO92_3335908_3335986 Ypseudotuberculosis_IP_31758_1551074_1551152 1 9925 23902 13963 9925 9940 99.42 9925 23903 100.00 41.58 Ypestis_CO92_3336061_3345985 Ypseudotuberculosis_IP_31758_1527097_1550999 1 13906 13923 1 13906 13923 99.24 13907 23903 99.99 58.25 Ypestis_CO92_3346736_3360642 Ypseudotuberculosis_IP_31758_1527097_1550999 1 2305 20495 18191 2305 2305 99.87 56675 20497 4.07 11.25 Ypestis_CO92_3360821_3417495 Ypseudotuberculosis_IP_31758_1506423_1526919 4155 14116 18006 8021 9962 9986 99.01 56675 20497 17.58 48.72 Ypestis_CO92_3360821_3417495 Ypseudotuberculosis_IP_31758_1506423_1526919 15432 23213 7804 1 7782 7804 98.94 56675 20497 13.73 38.07 Ypestis_CO92_3360821_3417495 Ypseudotuberculosis_IP_31758_1506423_1526919 23727 25661 1934 1 1935 1934 99.17 56675 1934 3.41 100.00 Ypestis_CO92_3360821_3417495 Ypseudotuberculosis_IP_31758_1500578_1502511 25662 25782 120 3 121 118 97.52 56675 120 0.21 98.33 Ypestis_CO92_3360821_3417495 Ypseudotuberculosis_IP_31758_1500321_1500440 25785 28261 90289 87819 2477 2471 99.27 56675 90289 4.37 2.74 Ypestis_CO92_3360821_3417495 Ypseudotuberculosis_IP_31758_1409895_1500183 28263 56675 87554 59137 28413 28418 99.59 56675 90289 50.13 31.47 Ypestis_CO92_3360821_3417495 Ypseudotuberculosis_IP_31758_1409895_1500183 1 9462 59103 49635 9462 9469 99.49 9462 90289 100.00 10.49 Ypestis_CO92_3418239_3427700 Ypseudotuberculosis_IP_31758_1409895_1500183 54 16017 25685 41683 15964 15999 97.52 16020 41745 99.65 38.33 Ypestis_CO92_3428428_3444447 Ypseudotuberculosis_IP_31758_3367036_3408780 1 1671 21 1690 1671 1670 96.59 1675 1690 99.76 98.82 Ypestis_CO92_3444856_3446530 Ypseudotuberculosis_IP_31758_3408862_3410551 1 18185 2 18163 18185 18162 99.27 35788 106852 50.81 17.00 Ypestis_CO92_3446698_3482485 Ypseudotuberculosis_IP_31758_3410722_3517573 18178 20282 18218 20322 2105 2105 93.12 35788 106852 5.88 1.97 Ypestis_CO92_3446698_3482485 Ypseudotuberculosis_IP_31758_3410722_3517573 20282 35788 20447 35951 15507 15505 99.57 35788 106852 43.33 14.51 Ypestis_CO92_3446698_3482485 Ypseudotuberculosis_IP_31758_3410722_3517573 1 57250 35970 93308 57250 57339 99.52 57250 106852 100.00 53.66 Ypestis_CO92_3484461_3541710 Ypseudotuberculosis_IP_31758_3410722_3517573 1 15481 15467 1 15481 15467 99.56 17982 15468 86.09 99.99 Ypestis_CO92_348854_366835 Ypseudotuberculosis_IP_31758_4141695_4157162 15469 17982 14365 11852 2514 2514 99.84 17982 14365 13.98 17.50 Ypestis_CO92_348854_366835 Ypseudotuberculosis_IP_31758_4127156_4141520 1 6098 93326 99406 6098 6081 99.34 6098 106852 100.00 5.69 Ypestis_CO92_3542438_3548535 Ypseudotuberculosis_IP_31758_3410722_3517573 1 6528 99418 105946 6528 6529 99.79 7371 106852 88.56 6.11 Ypestis_CO92_3549258_3556628 Ypseudotuberculosis_IP_31758_3410722_3517573 6455 7371 105913 106829 917 917 99.67 7371 106852 12.44 0.86 Ypestis_CO92_3549258_3556628 Ypseudotuberculosis_IP_31758_3410722_3517573 1 17047 6 17090 17047 17085 98.77 17048 63741 99.99 26.80 Ypestis_CO92_3557374_3574421 Ypseudotuberculosis_IP_31758_3518290_3582030 1 525 17087 17602 525 516 94.56 46786 63741 1.12 0.81 Ypestis_CO92_3576376_3623161 Ypseudotuberculosis_IP_31758_3518290_3582030 298 46786 17251 63741 46489 46491 99.02 46786 63741 99.37 72.94 Ypestis_CO92_3576376_3623161 Ypseudotuberculosis_IP_31758_3518290_3582030 1 206 1 206 206 206 88.35 1916 30244 10.75 0.68 Ypestis_CO92_3623340_3625255 Ypseudotuberculosis_IP_31758_3582209_3612452 140 1916 6935 8714 1777 1780 95.77 1916 30244 92.75 5.89 Ypestis_CO92_3623340_3625255 Ypseudotuberculosis_IP_31758_3582209_3612452 1 21478 8713 30244 21478 21532 99.15 21682 30244 99.06 71.19 Ypestis_CO92_3627214_3648895 Ypseudotuberculosis_IP_31758_3582209_3612452 1 6302 1 6308 6302 6308 99.65 6302 13919 100.00 45.32 Ypestis_CO92_3654610_3660911 Ypseudotuberculosis_IP_31758_3618307_3632225 1 1053 6321 7373 1053 1053 99.72 1053 13919 100.00 7.57 Ypestis_CO92_3661634_3662686 Ypseudotuberculosis_IP_31758_3618307_3632225 1 6528 7380 13910 6528 6531 99.60 6528 13919 100.00 46.92 Ypestis_CO92_3664652_3671179 Ypseudotuberculosis_IP_31758_3618307_3632225 1 6009 3 6011 6009 6009 99.67 6009 9856 100.00 60.97 Ypestis_CO92_3671912_3677920 Ypseudotuberculosis_IP_31758_3632948_3642803 1 4868 11834 6967 4868 4868 99.77 11327 14365 42.98 33.89 Ypestis_CO92_367563_378889 Ypseudotuberculosis_IP_31758_4127156_4141520 4817 9480 6877 2214 4664 4664 99.46 11327 14365 41.18 32.47 Ypestis_CO92_367563_378889 Ypseudotuberculosis_IP_31758_4127156_4141520 9264 11327 2307 244 2064 2064 99.37 11327 14365 18.22 14.37 Ypestis_CO92_367563_378889 Ypseudotuberculosis_IP_31758_4127156_4141520 1 3574 6028 9601 3574 3574 99.89 3574 9856 100.00 36.26 Ypestis_CO92_3678648_3682221 Ypseudotuberculosis_IP_31758_3632948_3642803 1 4233 1 4218 4233 4218 99.46 31259 4218 13.54 100.00 Ypestis_CO92_3682816_3714074 Ypseudotuberculosis_IP_31758_3643174_3647391 4295 27597 1 23270 23303 23270 99.02 31259 23274 74.55 99.98 Ypestis_CO92_3682816_3714074 Ypseudotuberculosis_IP_31758_3647949_3671222 27776 31259 9 3492 3484 3484 99.28 31259 45959 11.15 7.58 Ypestis_CO92_3682816_3714074 Ypseudotuberculosis_IP_31758_3671657_3717615 1 9614 3505 13190 9614 9686 98.73 42415 45959 22.67 21.08 Ypestis_CO92_3714798_3757212 Ypseudotuberculosis_IP_31758_3671657_3717615 10002 42415 13499 45958 32414 32460 99.23 42415 45959 76.42 70.63 Ypestis_CO92_3714798_3757212 Ypseudotuberculosis_IP_31758_3671657_3717615 1 25086 3 25042 25086 25040 99.09 58820 78698 42.65 31.82 Ypestis_CO92_3757394_3816213 Ypseudotuberculosis_IP_31758_3717795_3796492 15104 36772 15093 36718 21669 21626 98.85 58820 78698 36.84 27.48 Ypestis_CO92_3757394_3816213 Ypseudotuberculosis_IP_31758_3717795_3796492 36877 58820 36718 58669 21944 21952 99.07 58820 78698 37.31 27.89 Ypestis_CO92_3757394_3816213 Ypseudotuberculosis_IP_31758_3717795_3796492 1 205 205 1 205 205 99.51 206 14365 99.51 1.43 Ypestis_CO92_379230_379435 Ypseudotuberculosis_IP_31758_4127156_4141520 4 18904 18924 1 18901 18924 99.69 18904 18924 99.98 100.00 Ypestis_CO92_379513_398416 Ypseudotuberculosis_IP_31758_4107841_4126764 1 2804 58686 61489 2804 2804 99.93 19377 78698 14.47 3.56 Ypestis_CO92_3816941_3836317 Ypseudotuberculosis_IP_31758_3717795_3796492 2791 19351 61527 78121 16561 16595 99.28 19377 78698 85.47 21.09 Ypestis_CO92_3816941_3836317 Ypseudotuberculosis_IP_31758_3717795_3796492 3209 4396 30255 31442 1188 1188 92.68 4397 40007 27.02 2.97 Ypestis_CO92_3838873_3843269 Ypseudotuberculosis_IP_31758_3968931_4008937 1 8340 31668 40007 8340 8340 99.54 8340 40007 100.00 20.85 Ypestis_CO92_3843494_3851833 Ypseudotuberculosis_IP_31758_3968931_4008937 1 1765 1 1764 1765 1764 98.81 2731 2685 64.63 65.70 Ypestis_CO92_3852243_3854973 Ypseudotuberculosis_IP_31758_4009199_4011883 1806 2731 1761 2685 926 925 99.24 2731 2685 33.91 34.45 Ypestis_CO92_3852243_3854973 Ypseudotuberculosis_IP_31758_4009199_4011883 1 28140 1 28194 28140 28194 99.05 38991 28194 72.17 100.00 Ypestis_CO92_3855157_3894147 Ypseudotuberculosis_IP_31758_4012067_4040260 28218 38991 1 10771 10774 10771 99.58 38991 10774 27.63 99.97 Ypestis_CO92_3855157_3894147 Ypseudotuberculosis_IP_31758_4040338_4051111 1 6504 3 6506 6504 6504 99.89 6504 13265 100.00 49.03 Ypestis_CO92_3894321_3900824 Ypseudotuberculosis_IP_31758_4051280_4064544 1 6721 6521 13265 6721 6745 99.48 6721 13265 100.00 50.85 Ypestis_CO92_3902283_3909003 Ypseudotuberculosis_IP_31758_4051280_4064544 1 18236 1 18236 18236 18236 99.83 18236 18236 100.00 100.00 Ypestis_CO92_3909083_3927318 Ypseudotuberculosis_IP_31758_4064624_4082859 1 19623 1 19626 19623 19626 99.08 19623 24619 100.00 79.72 Ypestis_CO92_3927503_3947125 Ypseudotuberculosis_IP_31758_4083044_4107662 1 2514 19655 22168 2514 2514 99.88 2514 24619 100.00 10.21 Ypestis_CO92_3947864_3950377 Ypseudotuberculosis_IP_31758_4083044_4107662 1 2908 20506 17598 2908 2909 98.87 2908 35160 100.00 8.27 Ypestis_CO92_3952336_3955243 Ypseudotuberculosis_IP_31758_537530_572689 1 17325 17411 62 17325 17350 99.38 24428 35160 70.92 49.35 Ypestis_CO92_3955769_3980196 Ypseudotuberculosis_IP_31758_537530_572689 17340 24428 16056 8968 7089 7089 99.80 24428 16066 29.02 44.12 Ypestis_CO92_3955769_3980196 Ypseudotuberculosis_IP_31758_521362_537427 1 8945 8953 5 8945 8949 99.83 17837 16066 50.15 55.70 Ypestis_CO92_3980922_3998758 Ypseudotuberculosis_IP_31758_521362_537427 9076 17837 42130 33369 8762 8762 99.50 17837 42130 49.12 20.80 Ypestis_CO92_3980922_3998758 Ypseudotuberculosis_IP_31758_478949_521078 1 2447 24618 22172 2447 2447 99.88 2447 24619 100.00 9.94 Ypestis_CO92_398596_401042 Ypseudotuberculosis_IP_31758_4083044_4107662 1 16150 31699 47876 16150 16178 99.14 16150 47876 100.00 33.79 Ypestis_CO92_4000980_4017129 Ypseudotuberculosis_IP_31758_334820_382695 1 685 1 685 685 685 99.56 6739 685 10.16 100.00 Ypestis_CO92_4019390_4026128 Ypseudotuberculosis_IP_31758_384776_385460 5680 6739 1004 2146 1060 1143 91.51 6739 2146 15.73 53.26 Ypestis_CO92_4019390_4026128 Ypseudotuberculosis_IP_31758_395180_397325 1 4968 1 5004 4968 5004 98.56 17494 5967 28.40 83.86 Ypestis_CO92_4028209_4045702 Ypseudotuberculosis_IP_31758_399406_405372 6239 17494 44 11347 11256 11304 98.89 17494 11347 64.34 99.62 Ypestis_CO92_4028209_4045702 Ypseudotuberculosis_IP_31758_405561_416907 1 17001 1 17044 17001 17044 98.91 18415 18505 92.32 92.10 Ypestis_CO92_4045871_4064285 Ypseudotuberculosis_IP_31758_417076_435580 16978 18415 17066 18503 1438 1438 99.51 18415 18505 7.81 7.77 Ypestis_CO92_4045871_4064285 Ypseudotuberculosis_IP_31758_417076_435580 1 68 28 95 68 68 100.00 7540 95 0.90 71.58 Ypestis_CO92_4065017_4072556 Ypseudotuberculosis_IP_31758_435758_435852 775 7540 1 6793 6766 6793 99.12 7540 11961 89.73 56.79 Ypestis_CO92_4065017_4072556 Ypseudotuberculosis_IP_31758_437032_448992 1 4760 7185 11961 4760 4777 99.25 4760 11961 100.00 39.94 Ypestis_CO92_4072924_4077683 Ypseudotuberculosis_IP_31758_437032_448992 1 20449 1 20447 20449 20447 98.95 21536 21567 94.95 94.81 Ypestis_CO92_4077982_4099517 Ypseudotuberculosis_IP_31758_449535_471101 46 907 1 907 862 907 93.27 910 42130 94.73 2.15 Ypestis_CO92_4101464_4102373 Ypseudotuberculosis_IP_31758_478949_521078 1 6977 2857 9875 6977 7019 87.38 30437 42130 22.92 16.66 Ypestis_CO92_4104320_4134756 Ypseudotuberculosis_IP_31758_478949_521078 7194 11898 10092 14796 4705 4705 91.72 30437 42130 15.46 11.17 Ypestis_CO92_4104320_4134756 Ypseudotuberculosis_IP_31758_478949_521078 12330 22779 15384 25816 10450 10433 97.35 30437 42130 34.33 24.76 Ypestis_CO92_4104320_4134756 Ypseudotuberculosis_IP_31758_478949_521078 22904 30437 25816 33365 7534 7550 99.42 30437 42130 24.75 17.92 Ypestis_CO92_4104320_4134756 Ypseudotuberculosis_IP_31758_478949_521078 2650 8071 22479 17038 5422 5442 98.70 24877 40007 21.80 13.60 Ypestis_CO92_412199_437075 Ypseudotuberculosis_IP_31758_3968931_4008937 7857 24876 17032 1 17020 17032 98.69 24877 40007 68.42 42.57 Ypestis_CO92_412199_437075 Ypseudotuberculosis_IP_31758_3968931_4008937 1 6034 19421 25453 6034 6033 98.84 6034 25453 100.00 23.70 Ypestis_CO92_41229_47262 Ypseudotuberculosis_IP_31758_18884_44336 1 18007 31700 13695 18007 18006 99.20 31856 47876 56.53 37.61 Ypestis_CO92_4137900_4169755 Ypseudotuberculosis_IP_31758_334820_382695 18100 22851 13705 9002 4752 4704 93.23 31856 47876 14.92 9.83 Ypestis_CO92_4137900_4169755 Ypseudotuberculosis_IP_31758_334820_382695 23422 31853 8431 1 8432 8431 97.23 31856 47876 26.47 17.61 Ypestis_CO92_4137900_4169755 Ypseudotuberculosis_IP_31758_334820_382695 3 4794 4792 2 4792 4791 99.52 5328 4792 89.94 99.98 Ypestis_CO92_4169928_4175255 Ypseudotuberculosis_IP_31758_329851_334642 4787 5077 290 1 291 290 99.66 5328 292 5.46 99.32 Ypestis_CO92_4169928_4175255 Ypseudotuberculosis_IP_31758_328247_328538 5209 5327 119 1 119 119 100.00 5328 119 2.23 100.00 Ypestis_CO92_4169928_4175255 Ypseudotuberculosis_IP_31758_327997_328115 154 15790 1 15660 15637 15660 99.30 15849 15660 98.66 100.00 Ypestis_CO92_4180675_4196523 Ypseudotuberculosis_IP_31758_4329221_4344880 1 14139 65 14203 14139 14139 99.87 14139 14203 100.00 99.55 Ypestis_CO92_4197250_4211388 Ypseudotuberculosis_IP_31758_4345602_4359804 1 393 1 393 393 393 99.75 393 1059 100.00 37.11 Ypestis_CO92_4211566_4211958 Ypseudotuberculosis_IP_31758_4359982_4361040 1 668 398 1059 668 662 98.95 4129 1059 16.18 62.51 Ypestis_CO92_4213922_4218050 Ypseudotuberculosis_IP_31758_4359982_4361040 673 4129 1 3457 3457 3457 99.94 4129 3457 83.72 100.00 Ypestis_CO92_4213922_4218050 Ypseudotuberculosis_IP_31758_4361755_4365211 1 2511 100666 98156 2511 2511 99.96 2511 100667 100.00 2.49 Ypestis_CO92_4223772_4226282 Ypseudotuberculosis_IP_31758_221678_322344 1 9778 98138 88378 9778 9761 99.75 9778 100667 100.00 9.70 Ypestis_CO92_4227010_4236787 Ypseudotuberculosis_IP_31758_221678_322344 1 7971 88369 80399 7971 7971 99.79 37551 100667 21.23 7.92 Ypestis_CO92_4238755_4276305 Ypseudotuberculosis_IP_31758_221678_322344 7834 10601 80271 77535 2768 2737 96.86 37551 100667 7.37 2.72 Ypestis_CO92_4238755_4276305 Ypseudotuberculosis_IP_31758_221678_322344 10596 37548 77495 50532 26953 26964 98.57 37551 100667 71.78 26.79 Ypestis_CO92_4238755_4276305 Ypseudotuberculosis_IP_31758_221678_322344 1 17252 50495 33305 17252 17191 98.35 39360 100667 43.83 17.08 Ypestis_CO92_4277050_4316409 Ypseudotuberculosis_IP_31758_221678_322344 17386 19985 31876 29245 2600 2632 93.24 39360 100667 6.61 2.61 Ypestis_CO92_4277050_4316409 Ypseudotuberculosis_IP_31758_221678_322344 19996 39288 29123 9792 19293 19332 98.75 39360 100667 49.02 19.20 Ypestis_CO92_4277050_4316409 Ypseudotuberculosis_IP_31758_221678_322344 31 7229 7975 777 7199 7199 99.60 7229 100667 99.58 7.15 Ypestis_CO92_4316580_4323808 Ypseudotuberculosis_IP_31758_221678_322344 1 644 755 112 644 644 100.00 700 100667 92.00 0.64 Ypestis_CO92_4324540_4325239 Ypseudotuberculosis_IP_31758_221678_322344 628 699 72 1 72 72 100.00 700 100667 10.29 0.07 Ypestis_CO92_4324540_4325239 Ypseudotuberculosis_IP_31758_221678_322344 1 72 72 1 72 72 100.00 75 73 96.00 98.63 Ypestis_CO92_4325324_4325398 Ypseudotuberculosis_IP_31758_221521_221593 4 1944 1941 1 1941 1941 99.74 24977 1941 7.77 100.00 Ypestis_CO92_4325485_4350461 Ypseudotuberculosis_IP_31758_219488_221428 2022 16096 14090 1 14075 14090 99.36 24977 14090 56.35 100.00 Ypestis_CO92_4325485_4350461 Ypseudotuberculosis_IP_31758_205321_219410 16109 24976 39480 30611 8868 8870 99.73 24977 39480 35.50 22.47 Ypestis_CO92_4325485_4350461 Ypseudotuberculosis_IP_31758_165118_204597 1 7603 30615 22989 7603 7627 99.50 15007 39480 50.66 19.32 Ypestis_CO92_4351779_4366785 Ypseudotuberculosis_IP_31758_165118_204597 9035 13246 22372 18150 4212 4223 99.48 15007 39480 28.07 10.70 Ypestis_CO92_4351779_4366785 Ypseudotuberculosis_IP_31758_165118_204597 13920 14300 18052 17671 381 382 98.69 15007 39480 2.54 0.97 Ypestis_CO92_4351779_4366785 Ypseudotuberculosis_IP_31758_165118_204597 14300 14635 17712 17377 336 336 99.70 15007 39480 2.24 0.85 Ypestis_CO92_4351779_4366785 Ypseudotuberculosis_IP_31758_165118_204597 14762 15007 17250 17005 246 246 97.15 15007 39480 1.64 0.62 Ypestis_CO92_4351779_4366785 Ypseudotuberculosis_IP_31758_165118_204597 1 408 16873 16466 408 408 94.85 16422 39480 2.48 1.03 Ypestis_CO92_4367999_4384420 Ypseudotuberculosis_IP_31758_165118_204597 361 3985 15972 12348 3625 3625 99.48 16422 39480 22.07 9.18 Ypestis_CO92_4367999_4384420 Ypseudotuberculosis_IP_31758_165118_204597 4097 16421 12342 1 12325 12342 99.66 16422 39480 75.05 31.26 Ypestis_CO92_4367999_4384420 Ypseudotuberculosis_IP_31758_165118_204597 1 10119 10137 1 10119 10137 98.87 10120 10138 99.99 99.99 Ypestis_CO92_437242_447361 Ypseudotuberculosis_IP_31758_3958627_3968764 1 1244 114839 113590 1244 1250 96.88 27237 114840 4.57 1.09 Ypestis_CO92_4390194_4417430 Ypseudotuberculosis_IP_31758_44504_159343 2257 27237 112586 87616 24981 24971 99.22 27237 114840 91.72 21.74 Ypestis_CO92_4390194_4417430 Ypseudotuberculosis_IP_31758_44504_159343 1 453 213 670 453 458 97.60 49160 37757 0.92 1.21 Ypestis_CO92_4419199_4468358 Ypseudotuberculosis_IP_31758_4486323_4524079 456 2079 806 2429 1624 1624 99.38 49160 37757 3.30 4.30 Ypestis_CO92_4419199_4468358 Ypseudotuberculosis_IP_31758_4486323_4524079 2072 20356 2515 20764 18285 18250 95.98 49160 37757 37.19 48.34 Ypestis_CO92_4419199_4468358 Ypseudotuberculosis_IP_31758_4486323_4524079 20550 21163 20667 21280 614 614 89.09 49160 37757 1.25 1.63 Ypestis_CO92_4419199_4468358 Ypseudotuberculosis_IP_31758_4486323_4524079 21071 27420 27536 33891 6350 6356 93.97 49160 37757 12.92 16.83 Ypestis_CO92_4419199_4468358 Ypseudotuberculosis_IP_31758_4486323_4524079 27794 30709 34760 37620 2916 2861 96.78 49160 37757 5.93 7.58 Ypestis_CO92_4419199_4468358 Ypseudotuberculosis_IP_31758_4486323_4524079 30992 31298 953 1259 307 307 97.72 49160 72713 0.62 0.42 Ypestis_CO92_4419199_4468358 Ypseudotuberculosis_IP_31758_4524896_4597608 31292 36908 1411 6999 5617 5589 98.68 49160 72713 11.43 7.69 Ypestis_CO92_4419199_4468358 Ypseudotuberculosis_IP_31758_4524896_4597608 37020 49160 7000 19140 12141 12141 99.15 49160 72713 24.70 16.70 Ypestis_CO92_4419199_4468358 Ypseudotuberculosis_IP_31758_4524896_4597608 1 5540 19177 24712 5540 5536 97.76 48573 72713 11.41 7.61 Ypestis_CO92_4469105_4517677 Ypseudotuberculosis_IP_31758_4524896_4597608 5530 10367 30200 35019 4838 4820 98.53 48573 72713 9.96 6.63 Ypestis_CO92_4469105_4517677 Ypseudotuberculosis_IP_31758_4524896_4597608 10352 14464 35084 39195 4113 4112 97.76 48573 72713 8.47 5.66 Ypestis_CO92_4469105_4517677 Ypseudotuberculosis_IP_31758_4524896_4597608 14997 19904 39154 44055 4908 4902 96.52 48573 72713 10.10 6.74 Ypestis_CO92_4469105_4517677 Ypseudotuberculosis_IP_31758_4524896_4597608 20170 48573 44249 72713 28404 28465 98.13 48573 72713 58.48 39.15 Ypestis_CO92_4469105_4517677 Ypseudotuberculosis_IP_31758_4524896_4597608 1 7638 7639 1 7638 7639 99.15 7639 7640 99.99 99.99 Ypestis_CO92_447448_455086 Ypseudotuberculosis_IP_31758_3950518_3958157 1 2278 1 2278 2278 2278 99.34 2278 39375 100.00 5.79 Ypestis_CO92_4517763_4520040 Ypseudotuberculosis_IP_31758_4597694_4637068 1 19937 2283 22135 19937 19853 99.28 41971 39375 47.50 50.42 Ypestis_CO92_4522004_4563974 Ypseudotuberculosis_IP_31758_4597694_4637068 25619 34753 23085 32219 9135 9135 99.57 41971 39375 21.77 23.20 Ypestis_CO92_4522004_4563974 Ypseudotuberculosis_IP_31758_4597694_4637068 34767 41951 32195 39366 7185 7172 98.16 41971 39375 17.12 18.21 Ypestis_CO92_4522004_4563974 Ypseudotuberculosis_IP_31758_4597694_4637068 1 54344 100128 45707 54344 54422 98.51 54344 100130 100.00 54.35 Ypestis_CO92_455256_509599 Ypseudotuberculosis_IP_31758_3850220_3950349 75 24106 1 24062 24032 24062 99.30 24106 25068 99.69 95.99 Ypestis_CO92_4565717_4589822 Ypseudotuberculosis_IP_31758_4637691_4662758 1 1003 24067 25068 1003 1002 99.50 1003 25068 100.00 4.00 Ypestis_CO92_4589995_4590997 Ypseudotuberculosis_IP_31758_4637691_4662758 3 19454 1 19455 19452 19455 99.19 19454 19487 99.99 99.84 Ypestis_CO92_4591174_4610627 Ypseudotuberculosis_IP_31758_4662937_4682423 1 13820 231 14077 13820 13847 99.46 16839 15850 82.07 87.36 Ypestis_CO92_4612401_4629239 Ypseudotuberculosis_IP_31758_4682721_4698570 15072 16839 14083 15850 1768 1768 99.15 16839 15850 10.50 11.15 Ypestis_CO92_4612401_4629239 Ypseudotuberculosis_IP_31758_4682721_4698570 1 24318 4 24319 24318 24316 99.56 24318 24568 100.00 98.97 Ypestis_CO92_4629411_4653729 Ypseudotuberculosis_IP_31758_4698739_4723307 1 8882 1 8883 8882 8883 99.81 55907 114840 15.89 7.74 Ypestis_CO92_47430_103336 Ypseudotuberculosis_IP_31758_44504_159343 8882 9122 9000 9238 241 239 97.93 55907 114840 0.43 0.21 Ypestis_CO92_47430_103336 Ypseudotuberculosis_IP_31758_44504_159343 9061 25658 18453 35050 16598 16598 99.80 55907 114840 29.69 14.45 Ypestis_CO92_47430_103336 Ypseudotuberculosis_IP_31758_44504_159343 25650 52842 35118 62382 27193 27265 99.28 55907 114840 48.64 23.74 Ypestis_CO92_47430_103336 Ypseudotuberculosis_IP_31758_44504_159343 52831 55907 63343 66499 3077 3157 97.21 55907 114840 5.50 2.75 Ypestis_CO92_47430_103336 Ypseudotuberculosis_IP_31758_44504_159343 1 9167 45543 36383 9167 9161 98.34 9167 100130 100.00 9.15 Ypestis_CO92_510474_519640 Ypseudotuberculosis_IP_31758_3850220_3950349 1 36357 36362 1 36357 36362 99.31 36358 100130 100.00 36.31 Ypestis_CO92_520372_556729 Ypseudotuberculosis_IP_31758_3850220_3950349 1 9796 9798 3 9796 9796 99.59 12900 9799 75.94 99.97 Ypestis_CO92_556903_569802 Ypseudotuberculosis_IP_31758_3840248_3850046 9807 12899 3093 1 3093 3093 99.58 12900 3093 23.98 100.00 Ypestis_CO92_556903_569802 Ypseudotuberculosis_IP_31758_3836436_3839528 42 1080 14940 13902 1039 1039 99.81 1080 14940 96.20 6.95 Ypestis_CO92_570103_571182 Ypseudotuberculosis_IP_31758_3821086_3836025 1 5222 13898 8677 5222 5222 99.52 5222 14940 100.00 34.95 Ypestis_CO92_573145_578366 Ypseudotuberculosis_IP_31758_3821086_3836025 1 7180 8643 1444 7180 7200 99.15 7180 14940 100.00 48.19 Ypestis_CO92_579111_586290 Ypseudotuberculosis_IP_31758_3821086_3836025 1 1426 1426 1 1426 1426 99.58 2324 14940 61.36 9.54 Ypestis_CO92_587019_589342 Ypseudotuberculosis_IP_31758_3821086_3836025 1435 2319 885 1 885 885 99.21 2324 885 38.08 100.00 Ypestis_CO92_587019_589342 Ypseudotuberculosis_IP_31758_3819482_3820366 1 22611 22626 1 22611 22626 99.71 22612 22627 100.00 100.00 Ypestis_CO92_589517_612128 Ypseudotuberculosis_IP_31758_3796677_3819303 1 519 78697 78179 519 519 99.81 519 78698 100.00 0.66 Ypestis_CO92_612313_612831 Ypseudotuberculosis_IP_31758_3717795_3796492 1 13127 20508 33634 13127 13127 99.46 13127 35160 100.00 37.34 Ypestis_CO92_614926_628052 Ypseudotuberculosis_IP_31758_537530_572689 7 1488 33679 35160 1482 1482 98.65 25622 35160 5.78 4.22 Ypestis_CO92_628801_654422 Ypseudotuberculosis_IP_31758_537530_572689 1496 25622 1 24216 24127 24216 98.89 25622 25403 94.17 95.33 Ypestis_CO92_628801_654422 Ypseudotuberculosis_IP_31758_573408_598810 1 398 25006 25403 398 398 97.49 5269 25403 7.55 1.57 Ypestis_CO92_655212_660480 Ypseudotuberculosis_IP_31758_573408_598810 170 31140 13 30985 30971 30973 99.34 32446 52800 95.45 58.66 Ypestis_CO92_661265_693710 Ypseudotuberculosis_IP_31758_614543_667342 31129 32173 31019 32063 1045 1045 98.76 32446 52800 3.22 1.98 Ypestis_CO92_661265_693710 Ypseudotuberculosis_IP_31758_614543_667342 182 601 32069 32488 420 420 99.52 1917 52800 21.91 0.80 Ypestis_CO92_696161_698077 Ypseudotuberculosis_IP_31758_614543_667342 1 18762 34020 52793 18762 18774 99.62 18762 52800 100.00 35.56 Ypestis_CO92_698196_716957 Ypseudotuberculosis_IP_31758_614543_667342 1 2861 1 2845 2861 2845 99.13 2861 42583 100.00 6.68 Ypestis_CO92_717138_719998 Ypseudotuberculosis_IP_31758_667516_710098 1 15513 3214 18722 15513 15509 99.63 36384 42583 42.64 36.42 Ypestis_CO92_720367_756750 Ypseudotuberculosis_IP_31758_667516_710098 15510 24602 19681 28792 9093 9112 99.11 36384 42583 24.99 21.40 Ypestis_CO92_720367_756750 Ypseudotuberculosis_IP_31758_667516_710098 24559 36379 28803 40579 11821 11777 97.68 36384 42583 32.49 27.66 Ypestis_CO92_720367_756750 Ypseudotuberculosis_IP_31758_667516_710098 1 26349 4801 31003 26349 26203 95.98 27096 82033 97.24 31.94 Ypestis_CO92_758198_785293 Ypseudotuberculosis_IP_31758_719675_801707 26513 27096 31134 31717 584 584 95.89 27096 82033 2.16 0.71 Ypestis_CO92_758198_785293 Ypseudotuberculosis_IP_31758_719675_801707 2 9896 31736 41623 9895 9888 92.31 10261 82033 96.43 12.05 Ypestis_CO92_786022_796282 Ypseudotuberculosis_IP_31758_719675_801707 1 108 42347 42454 108 108 99.07 1333 82033 8.10 0.13 Ypestis_CO92_796664_797996 Ypseudotuberculosis_IP_31758_719675_801707 110 1086 42595 43571 977 977 94.48 1333 82033 73.29 1.19 Ypestis_CO92_796664_797996 Ypseudotuberculosis_IP_31758_719675_801707 2 6821 44125 50861 6820 6737 92.66 9894 82033 68.93 8.21 Ypestis_CO92_799805_809698 Ypseudotuberculosis_IP_31758_719675_801707 7232 9894 50861 53584 2663 2724 95.23 9894 82033 26.92 3.32 Ypestis_CO92_799805_809698 Ypseudotuberculosis_IP_31758_719675_801707 1 5566 7854 2280 5566 5575 98.22 45696 43572 12.18 12.79 Ypestis_CO92_811233_856928 Ypseudotuberculosis_IP_31758_858711_902282 6455 16233 12097 2304 9779 9794 98.31 45696 12097 21.40 80.96 Ypestis_CO92_811233_856928 Ypseudotuberculosis_IP_31758_844464_856560 16232 34184 40521 22533 17953 17989 99.08 45696 40521 39.29 44.39 Ypestis_CO92_811233_856928 Ypseudotuberculosis_IP_31758_801811_842331 34357 45696 22531 11175 11340 11357 98.06 45696 40521 24.82 28.03 Ypestis_CO92_811233_856928 Ypseudotuberculosis_IP_31758_801811_842331 1 587 8250 7664 587 587 98.98 8152 25193 7.20 2.33 Ypestis_CO92_858892_867043 Ypseudotuberculosis_IP_31758_1170409_1195601 561 8151 7626 1 7591 7626 98.91 8152 25193 93.12 30.27 Ypestis_CO92_858892_867043 Ypseudotuberculosis_IP_31758_1170409_1195601 1 38736 38772 1 38736 38772 99.07 38756 38773 99.95 100.00 Ypestis_CO92_867210_905965 Ypseudotuberculosis_IP_31758_1131470_1170242 20 11897 11878 1 11878 11878 99.67 23662 11918 50.20 99.66 Ypestis_CO92_908805_932466 Ypseudotuberculosis_IP_31758_1119363_1131280 11882 23662 11790 10 11781 11781 99.43 23662 11790 49.79 99.92 Ypestis_CO92_908805_932466 Ypseudotuberculosis_IP_31758_1107402_1119191 1 16605 16616 1 16605 16616 98.97 25501 16617 65.12 99.99 Ypestis_CO92_932652_958152 Ypseudotuberculosis_IP_31758_1090610_1107226 16614 25501 41986 33062 8888 8925 99.08 25501 41989 34.85 21.26 Ypestis_CO92_932652_958152 Ypseudotuberculosis_IP_31758_1048447_1090435 1 786 32696 31911 786 786 99.87 32565 41989 2.41 1.87 Ypestis_CO92_958518_991082 Ypseudotuberculosis_IP_31758_1048447_1090435 1207 4975 31493 27750 3769 3744 98.91 32565 41989 11.57 8.92 Ypestis_CO92_958518_991082 Ypseudotuberculosis_IP_31758_1048447_1090435 4975 26667 27644 5973 21693 21672 99.21 32565 41989 66.61 51.61 Ypestis_CO92_958518_991082 Ypseudotuberculosis_IP_31758_1048447_1090435 26621 32564 5968 1 5944 5968 99.15 32565 41989 18.25 14.21 Ypestis_CO92_958518_991082 Ypseudotuberculosis_IP_31758_1048447_1090435 8042 11689 3664 1 3648 3664 99.04 11690 11835 31.21 30.96 Ypestis_CO92_991255_1002944 Ypseudotuberculosis_IP_31758_1036433_1048267