/users/252891/scratch/edge/database/yersinia/results/Ypestis_CO92_norepeats.fna /users/252891/scratch/edge/database/yersinia/results/Ypseudotuberculosis_PB1_norepeats.fna NUCMER [S1] [E1] [S2] [E2] [LEN 1] [LEN 2] [% IDY] [LEN R] [LEN Q] [COV R] [COV Q] [TAGS] 1 6451 1 6451 6451 6451 99.75 6451 6451 100.00 100.00 Ypestis_CO92_1003117_1009567 Ypseudotuberculosis_PB1_3664723_3671173 1 3759 1 3759 3759 3759 99.84 3766 39707 99.81 9.47 Ypestis_CO92_1009744_1013509 Ypseudotuberculosis_PB1_3671350_3711056 1 3431 3770 7183 3431 3414 98.60 3431 39707 100.00 8.60 Ypestis_CO92_1016182_1019612 Ypseudotuberculosis_PB1_3671350_3711056 3 6525 7171 13693 6523 6523 99.77 44122 39707 14.78 16.43 Ypestis_CO92_1019783_1063904 Ypseudotuberculosis_PB1_3671350_3711056 6472 27247 13703 34479 20776 20777 97.79 44122 39707 47.09 52.33 Ypestis_CO92_1019783_1063904 Ypseudotuberculosis_PB1_3671350_3711056 27516 32394 34753 39707 4879 4955 97.68 44122 39707 11.06 12.48 Ypestis_CO92_1019783_1063904 Ypseudotuberculosis_PB1_3671350_3711056 32510 37195 1 4704 4686 4704 99.23 44122 11728 10.62 40.11 Ypestis_CO92_1019783_1063904 Ypseudotuberculosis_PB1_3711296_3723023 37158 44122 4739 11728 6965 6990 98.71 44122 11728 15.79 59.60 Ypestis_CO92_1019783_1063904 Ypseudotuberculosis_PB1_3711296_3723023 1 1493 57131 58637 1493 1507 99.00 1493 78228 100.00 1.93 Ypestis_CO92_104085_105577 Ypseudotuberculosis_PB1_39396_117623 1 618 1 618 618 618 99.84 618 618 100.00 100.00 Ypestis_CO92_1064006_1064623 Ypseudotuberculosis_PB1_3723125_3723742 614 723 1 110 110 110 99.09 723 110 15.21 100.00 Ypestis_CO92_1065232_1065954 Ypseudotuberculosis_PB1_3724965_3725074 1 1622 1 1622 1622 1622 99.94 1622 3140 100.00 51.66 Ypestis_CO92_1066587_1068208 Ypseudotuberculosis_PB1_3725707_3728846 1 8391 1 8440 8391 8440 96.59 8391 8440 100.00 100.00 Ypestis_CO92_1071581_1079971 Ypseudotuberculosis_PB1_3730702_3739141 1 19494 58636 78119 19494 19484 99.44 19541 78228 99.76 24.91 Ypestis_CO92_107536_127076 Ypseudotuberculosis_PB1_39396_117623 9483 19541 68117 78198 10059 10082 98.89 19541 78228 51.48 12.89 Ypestis_CO92_107536_127076 Ypseudotuberculosis_PB1_39396_117623 1 20607 3 20618 20607 20616 99.05 20607 28465 100.00 72.43 Ypestis_CO92_1086850_1107456 Ypseudotuberculosis_PB1_3746018_3774482 1 22838 26204 3384 22838 22821 97.72 36984 26205 61.75 87.09 Ypestis_CO92_1108940_1145923 Ypseudotuberculosis_PB1_3831982_3858186 27200 29732 2530 1 2533 2530 95.54 36984 26205 6.85 9.65 Ypestis_CO92_1108940_1145923 Ypseudotuberculosis_PB1_3831982_3858186 29772 36984 48485 41277 7213 7209 96.73 36984 48485 19.50 14.87 Ypestis_CO92_1108940_1145923 Ypseudotuberculosis_PB1_3783097_3831581 1 16921 16908 1 16921 16908 99.76 16922 64009 99.99 26.42 Ypestis_CO92_1147889_1164810 Ypseudotuberculosis_PB1_3476458_3540466 2 120 119 1 119 119 97.48 121 143 98.35 83.22 Ypestis_CO92_1164890_1165010 Ypseudotuberculosis_PB1_3476099_3476241 1 7453 7451 1 7453 7451 99.48 7454 7452 99.99 99.99 Ypestis_CO92_1165091_1172544 Ypseudotuberculosis_PB1_3468567_3476018 1 4628 43735 39108 4628 4628 99.76 4628 43736 100.00 10.58 Ypestis_CO92_1172722_1177349 Ypseudotuberculosis_PB1_3424654_3468389 1 39116 39090 1 39116 39090 99.75 39117 43736 100.00 89.38 Ypestis_CO92_1178077_1217193 Ypseudotuberculosis_PB1_3424654_3468389 1 9455 10218 774 9455 9445 99.56 9455 10219 100.00 92.43 Ypestis_CO92_1222819_1232273 Ypseudotuberculosis_PB1_3408810_3419028 9651 10268 21280 21898 618 619 89.66 10268 23450 6.02 2.64 Ypestis_CO92_1234525_1244792 Ypseudotuberculosis_PB1_1318099_1341548 1 27456 13535 40985 27456 27451 99.83 27456 40985 100.00 66.98 Ypestis_CO92_1245590_1273045 Ypseudotuberculosis_PB1_1343501_1384485 85 4833 1 4767 4749 4767 99.39 4833 125139 98.26 3.81 Ypestis_CO92_1273227_1278059 Ypseudotuberculosis_PB1_1384957_1510095 1 10166 4779 14947 10166 10169 99.66 30006 125139 33.88 8.13 Ypestis_CO92_1280030_1310035 Ypseudotuberculosis_PB1_1384957_1510095 10170 27896 14881 32715 17727 17835 99.09 30006 125139 59.08 14.25 Ypestis_CO92_1280030_1310035 Ypseudotuberculosis_PB1_1384957_1510095 27817 30006 32760 34949 2190 2190 99.59 30006 125139 7.30 1.75 Ypestis_CO92_1280030_1310035 Ypseudotuberculosis_PB1_1384957_1510095 1 10039 21969 11930 10039 10040 99.73 61407 22060 16.35 45.51 Ypestis_CO92_128641_190047 Ypseudotuberculosis_PB1_4397114_4419173 10080 22113 12029 1 12034 12029 99.41 61407 22060 19.60 54.53 Ypestis_CO92_128641_190047 Ypseudotuberculosis_PB1_4397114_4419173 22107 28887 6781 1 6781 6781 99.76 61407 6781 11.04 100.00 Ypestis_CO92_128641_190047 Ypseudotuberculosis_PB1_4390156_4396936 28999 61407 33015 722 32409 32294 99.19 61407 33015 52.78 97.82 Ypestis_CO92_128641_190047 Ypseudotuberculosis_PB1_4356784_4389798 1 10347 34977 45351 10347 10375 99.35 10347 125139 100.00 8.29 Ypestis_CO92_1310774_1321120 Ypseudotuberculosis_PB1_1384957_1510095 1420 13439 64513 76533 12020 12021 99.64 61471 125139 19.55 9.61 Ypestis_CO92_1321848_1383318 Ypseudotuberculosis_PB1_1384957_1510095 13405 22024 76548 85167 8620 8620 99.55 61471 125139 14.02 6.89 Ypestis_CO92_1321848_1383318 Ypseudotuberculosis_PB1_1384957_1510095 21930 48802 85143 111993 26873 26851 99.30 61471 125139 43.72 21.46 Ypestis_CO92_1321848_1383318 Ypseudotuberculosis_PB1_1384957_1510095 48788 61471 112017 124702 12684 12686 99.83 61471 125139 20.63 10.14 Ypestis_CO92_1321848_1383318 Ypseudotuberculosis_PB1_1384957_1510095 1 410 124730 125139 410 410 99.27 410 125139 100.00 0.33 Ypestis_CO92_1384056_1384465 Ypseudotuberculosis_PB1_1384957_1510095 1 13786 1 13856 13786 13856 99.20 19279 18975 71.51 73.02 Ypestis_CO92_1384539_1403817 Ypseudotuberculosis_PB1_1510169_1529143 14091 19279 13805 18975 5189 5171 99.44 19279 18975 26.92 27.25 Ypestis_CO92_1384539_1403817 Ypseudotuberculosis_PB1_1510169_1529143 1 9769 1 9767 9769 9767 99.76 9769 9767 100.00 100.00 Ypestis_CO92_1403989_1413757 Ypseudotuberculosis_PB1_1529315_1539081 1 111 1 111 111 111 98.20 1477 105007 7.52 0.11 Ypestis_CO92_1413876_1415352 Ypseudotuberculosis_PB1_1539200_1644206 1262 1477 1147 1362 216 216 98.15 1477 105007 14.62 0.21 Ypestis_CO92_1413876_1415352 Ypseudotuberculosis_PB1_1539200_1644206 1 4178 1857 6036 4178 4180 99.31 4178 105007 100.00 3.98 Ypestis_CO92_1415847_1420024 Ypseudotuberculosis_PB1_1539200_1644206 1 57310 6061 63486 57310 57426 99.23 81972 105007 69.91 54.69 Ypestis_CO92_1420759_1502730 Ypseudotuberculosis_PB1_1539200_1644206 57378 75072 63431 81135 17695 17705 99.55 81972 105007 21.59 16.86 Ypestis_CO92_1420759_1502730 Ypseudotuberculosis_PB1_1539200_1644206 75041 81972 81146 88049 6932 6904 99.05 81972 105007 8.46 6.57 Ypestis_CO92_1420759_1502730 Ypseudotuberculosis_PB1_1539200_1644206 1 725 88061 88784 725 724 99.31 16976 105007 4.27 0.69 Ypestis_CO92_1504701_1521676 Ypseudotuberculosis_PB1_1539200_1644206 768 16975 88778 105007 16208 16230 99.27 16976 105007 95.48 15.46 Ypestis_CO92_1504701_1521676 Ypseudotuberculosis_PB1_1539200_1644206 2 16002 1 16001 16001 16001 99.88 16002 74425 99.99 21.50 Ypestis_CO92_1521771_1537772 Ypseudotuberculosis_PB1_1644303_1718727 1 41656 16020 57711 41656 41692 99.32 54538 74425 76.38 56.02 Ypestis_CO92_1538501_1593038 Ypseudotuberculosis_PB1_1644303_1718727 41609 54538 57718 70702 12930 12985 99.38 54538 74425 23.71 17.45 Ypestis_CO92_1538501_1593038 Ypseudotuberculosis_PB1_1644303_1718727 1 3700 70726 74425 3700 3700 99.65 3700 74425 100.00 4.97 Ypestis_CO92_1593772_1597471 Ypseudotuberculosis_PB1_1644303_1718727 1 9532 1 9541 9532 9541 98.94 21051 9541 45.28 100.00 Ypestis_CO92_1597647_1618697 Ypseudotuberculosis_PB1_1718903_1728443 9528 21051 1 11506 11524 11506 99.66 21051 11528 54.74 99.81 Ypestis_CO92_1597647_1618697 Ypseudotuberculosis_PB1_1729762_1741289 1 974 6 979 974 974 99.59 974 33580 100.00 2.90 Ypestis_CO92_1619435_1620408 Ypseudotuberculosis_PB1_1741999_1775578 1 4055 990 5044 4055 4055 100.00 4055 33580 100.00 12.08 Ypestis_CO92_1622378_1626432 Ypseudotuberculosis_PB1_1741999_1775578 1 14569 5078 19714 14569 14637 99.27 28780 33580 50.62 43.59 Ypestis_CO92_1627177_1655956 Ypseudotuberculosis_PB1_1741999_1775578 14891 28780 19715 33578 13890 13864 99.54 28780 33580 48.26 41.29 Ypestis_CO92_1627177_1655956 Ypseudotuberculosis_PB1_1741999_1775578 1 4661 1 4661 4661 4661 94.38 4661 101413 100.00 4.60 Ypestis_CO92_1662841_1667501 Ypseudotuberculosis_PB1_1782470_1883882 5349 5620 61640 61369 272 272 94.12 24293 125139 1.12 0.22 Ypestis_CO92_1669628_1693920 Ypseudotuberculosis_PB1_1384957_1510095 7001 24293 13711 31001 17293 17291 98.83 24293 101413 71.19 17.05 Ypestis_CO92_1669628_1693920 Ypseudotuberculosis_PB1_1782470_1883882 1 31193 31008 62208 31193 31201 99.50 31193 101413 100.00 30.77 Ypestis_CO92_1695250_1726442 Ypseudotuberculosis_PB1_1782470_1883882 1 37458 62225 99717 37458 37493 99.58 37940 101413 98.73 36.97 Ypestis_CO92_1729129_1767068 Ypseudotuberculosis_PB1_1782470_1883882 37461 37929 100945 101413 469 469 99.79 37940 101413 1.24 0.46 Ypestis_CO92_1729129_1767068 Ypseudotuberculosis_PB1_1782470_1883882 169 342 21383 21210 174 174 100.00 348 21383 50.00 0.81 Ypestis_CO92_17486_17833 Ypseudotuberculosis_PB1_4622491_4643873 69 6700 1 6649 6632 6649 98.53 10624 29864 62.42 22.26 Ypestis_CO92_1767156_1777779 Ypseudotuberculosis_PB1_1884062_1913925 6497 10624 6989 11117 4128 4129 98.02 10624 29864 38.86 13.83 Ypestis_CO92_1767156_1777779 Ypseudotuberculosis_PB1_1884062_1913925 1 18440 11113 29547 18440 18435 99.37 18474 29864 99.82 61.73 Ypestis_CO92_1779098_1797571 Ypseudotuberculosis_PB1_1884062_1913925 1 5631 7 5637 5631 5631 99.54 9317 10964 60.44 51.36 Ypestis_CO92_1797676_1806992 Ypseudotuberculosis_PB1_1949845_1960808 5596 9317 5642 9362 3722 3721 99.62 9317 10964 39.95 33.94 Ypestis_CO92_1797676_1806992 Ypseudotuberculosis_PB1_1949845_1960808 1 3092 16589 13498 3092 3092 99.68 3092 18456 100.00 16.75 Ypestis_CO92_1808313_1811404 Ypseudotuberculosis_PB1_2830281_2848736 1 1803 13494 11695 1803 1800 96.13 5285 18456 34.12 9.75 Ypestis_CO92_1812731_1818015 Ypseudotuberculosis_PB1_2830281_2848736 1735 5285 11718 8168 3551 3551 99.21 5285 18456 67.19 19.24 Ypestis_CO92_1812731_1818015 Ypseudotuberculosis_PB1_2830281_2848736 1 6986 8145 1160 6986 6986 99.81 6986 18456 100.00 37.85 Ypestis_CO92_1818748_1825733 Ypseudotuberculosis_PB1_2830281_2848736 1 1142 1142 1 1142 1142 99.65 1145 18456 99.74 6.19 Ypestis_CO92_1826462_1827606 Ypseudotuberculosis_PB1_2830281_2848736 1 5354 19378 14025 5354 5354 99.74 5354 19378 100.00 27.63 Ypestis_CO92_1827777_1833130 Ypseudotuberculosis_PB1_2810730_2830107 154 7077 6944 22 6924 6923 99.84 8565 19378 80.84 35.73 Ypestis_CO92_1833861_1842425 Ypseudotuberculosis_PB1_2810730_2830107 7112 8565 172105 170653 1454 1453 99.72 8565 172105 16.98 0.84 Ypestis_CO92_1833861_1842425 Ypseudotuberculosis_PB1_2638291_2810395 1 278 170656 170379 278 278 100.00 279 172105 99.64 0.16 Ypestis_CO92_1843745_1844023 Ypseudotuberculosis_PB1_2638291_2810395 1 52589 170378 117782 52589 52597 99.24 58495 172105 89.90 30.56 Ypestis_CO92_1845983_1904477 Ypseudotuberculosis_PB1_2638291_2810395 128 22265 117564 95444 22138 22121 98.63 22265 172105 99.43 12.85 Ypestis_CO92_1906606_1928870 Ypseudotuberculosis_PB1_2638291_2810395 1 6822 6 6837 6822 6832 99.74 6822 25458 100.00 26.84 Ypestis_CO92_19154_25975 Ypseudotuberculosis_PB1_13770_39227 1 715 715 1 715 715 99.44 716 33015 99.86 2.17 Ypestis_CO92_192013_192728 Ypseudotuberculosis_PB1_4356784_4389798 4 26768 52250 25521 26765 26730 99.44 26768 52254 99.99 51.15 Ypestis_CO92_192907_219674 Ypseudotuberculosis_PB1_4304352_4356605 1 2367 95443 93077 2367 2367 99.70 41281 172105 5.73 1.38 Ypestis_CO92_1930830_1972110 Ypseudotuberculosis_PB1_2638291_2810395 2399 5014 93087 90472 2616 2616 99.27 41281 172105 6.34 1.52 Ypestis_CO92_1930830_1972110 Ypseudotuberculosis_PB1_2638291_2810395 5058 18144 90530 77445 13087 13086 99.53 41281 172105 31.70 7.60 Ypestis_CO92_1930830_1972110 Ypseudotuberculosis_PB1_2638291_2810395 18065 41281 77473 54217 23217 23257 99.58 41281 172105 56.24 13.51 Ypestis_CO92_1930830_1972110 Ypseudotuberculosis_PB1_2638291_2810395 1 1245 9366 10610 1245 1245 99.92 1245 10964 100.00 11.36 Ypestis_CO92_1973434_1974678 Ypseudotuberculosis_PB1_1949845_1960808 1 343 10612 10964 343 353 97.17 15915 10964 2.16 3.22 Ypestis_CO92_1976639_1992553 Ypseudotuberculosis_PB1_1949845_1960808 446 15915 1 15484 15470 15484 99.75 15915 54711 97.20 28.30 Ypestis_CO92_1976639_1992553 Ypseudotuberculosis_PB1_1960911_2015621 1 10023 15489 25543 10023 10055 99.35 45052 54711 22.25 18.38 Ypestis_CO92_1994517_2039568 Ypseudotuberculosis_PB1_1960911_2015621 10015 14951 25624 30564 4937 4941 99.41 45052 54711 10.96 9.03 Ypestis_CO92_1994517_2039568 Ypseudotuberculosis_PB1_1960911_2015621 14941 39047 30623 54711 24107 24089 99.68 45052 54711 53.51 44.03 Ypestis_CO92_1994517_2039568 Ypseudotuberculosis_PB1_1960911_2015621 39041 39482 1 442 442 442 99.77 45052 19615 0.98 2.25 Ypestis_CO92_1994517_2039568 Ypseudotuberculosis_PB1_2016938_2036552 39477 39619 2543 2685 143 143 97.90 45052 19615 0.32 0.73 Ypestis_CO92_1994517_2039568 Ypseudotuberculosis_PB1_2016938_2036552 39774 45052 2717 7995 5279 5279 99.64 45052 19615 11.72 26.91 Ypestis_CO92_1994517_2039568 Ypseudotuberculosis_PB1_2016938_2036552 1 11816 11818 1 11816 11818 99.58 11817 36134 99.99 32.71 Ypestis_CO92_1_11817 Ypseudotuberculosis_PB1_4649778_4685911 1 7705 8025 15743 7705 7719 98.99 11325 19615 68.04 39.35 Ypestis_CO92_2040309_2051633 Ypseudotuberculosis_PB1_2016938_2036552 7704 11322 15997 19615 3619 3619 99.89 11325 19615 31.96 18.45 Ypestis_CO92_2040309_2051633 Ypseudotuberculosis_PB1_2016938_2036552 1 12239 1 12218 12239 12218 99.21 40865 40935 29.95 29.85 Ypestis_CO92_2052326_2093190 Ypseudotuberculosis_PB1_2037391_2078325 13295 25427 13301 25406 12133 12106 99.11 40865 40935 29.69 29.57 Ypestis_CO92_2052326_2093190 Ypseudotuberculosis_PB1_2037391_2078325 25397 40865 25456 40935 15469 15480 99.41 40865 40935 37.85 37.82 Ypestis_CO92_2052326_2093190 Ypseudotuberculosis_PB1_2037391_2078325 1 21670 1 21701 21670 21701 99.64 21671 21701 100.00 100.00 Ypestis_CO92_2093362_2115032 Ypseudotuberculosis_PB1_2078497_2100197 1 167 1 167 167 167 100.00 20345 167 0.82 100.00 Ypestis_CO92_2115110_2135454 Ypseudotuberculosis_PB1_2100276_2100442 352 2806 64 2518 2455 2455 98.86 20345 3279 12.07 74.87 Ypestis_CO92_2115110_2135454 Ypseudotuberculosis_PB1_2135919_2139197 2772 3423 2628 3279 652 652 99.69 20345 3279 3.20 19.88 Ypestis_CO92_2115110_2135454 Ypseudotuberculosis_PB1_2135919_2139197 5037 7176 1 2121 2140 2121 98.64 20345 2121 10.52 100.00 Ypestis_CO92_2115110_2135454 Ypseudotuberculosis_PB1_2150999_2153119 7454 19814 1 12396 12361 12396 99.47 20345 12396 60.76 100.00 Ypestis_CO92_2115110_2135454 Ypseudotuberculosis_PB1_2153397_2165792 19813 20081 29594 29862 269 269 100.00 20345 29864 1.32 0.90 Ypestis_CO92_2115110_2135454 Ypseudotuberculosis_PB1_1884062_1913925 1 33868 4 33865 33868 33862 99.92 33872 33865 99.99 99.99 Ypestis_CO92_2137416_2171287 Ypseudotuberculosis_PB1_1915878_1949742 1 5292 7 5298 5292 5292 99.87 30029 30212 17.62 17.52 Ypestis_CO92_2171392_2201420 Ypseudotuberculosis_PB1_2165894_2196105 5285 30029 5378 30212 24745 24835 99.27 30029 30212 82.40 82.20 Ypestis_CO92_2171392_2201420 Ypseudotuberculosis_PB1_2165894_2196105 1 34475 1 34491 34475 34491 99.59 34672 34492 99.43 100.00 Ypestis_CO92_2201591_2236262 Ypseudotuberculosis_PB1_2196276_2230767 34473 34672 1 200 200 200 100.00 34672 51056 0.58 0.39 Ypestis_CO92_2201591_2236262 Ypseudotuberculosis_PB1_2232724_2283779 1 25302 25481 196 25302 25286 99.88 25302 52254 100.00 48.39 Ypestis_CO92_220424_245725 Ypseudotuberculosis_PB1_4304352_4356605 1 291 199 490 291 292 99.66 19017 51056 1.53 0.57 Ypestis_CO92_2238218_2257234 Ypseudotuberculosis_PB1_2232724_2283779 337 19017 850 19527 18681 18678 99.32 19017 51056 98.23 36.58 Ypestis_CO92_2238218_2257234 Ypseudotuberculosis_PB1_2232724_2283779 1 20002 19524 39510 20002 19987 99.43 34949 51056 57.23 39.15 Ypestis_CO92_2258554_2293502 Ypseudotuberculosis_PB1_2232724_2283779 23494 34882 39405 50793 11389 11389 99.60 34949 51056 32.59 22.31 Ypestis_CO92_2258554_2293502 Ypseudotuberculosis_PB1_2232724_2283779 34835 34949 50942 51056 115 115 100.00 34949 51056 0.33 0.23 Ypestis_CO92_2258554_2293502 Ypseudotuberculosis_PB1_2232724_2283779 1 439 31 469 439 439 100.00 439 2583 100.00 17.00 Ypestis_CO92_2294422_2294860 Ypseudotuberculosis_PB1_2283958_2286540 1 2100 473 2583 2100 2111 99.05 2100 2583 100.00 81.73 Ypestis_CO92_2296823_2298922 Ypseudotuberculosis_PB1_2283958_2286540 1 4867 1 4867 4867 4867 99.71 4867 7607 100.00 63.98 Ypestis_CO92_2299015_2303881 Ypseudotuberculosis_PB1_2286633_2294239 1 2729 4880 7607 2729 2728 99.63 2729 7607 100.00 35.86 Ypestis_CO92_2304604_2307332 Ypseudotuberculosis_PB1_2286633_2294239 1 2675 1 2675 2675 2675 99.78 23146 35124 11.56 7.62 Ypestis_CO92_2307425_2330570 Ypseudotuberculosis_PB1_2294332_2329455 2663 23146 2705 23102 20484 20398 97.19 23146 35124 88.50 58.07 Ypestis_CO92_2307425_2330570 Ypseudotuberculosis_PB1_2294332_2329455 1 11731 23318 35124 11731 11807 99.12 11736 35124 99.96 33.62 Ypestis_CO92_2331034_2342769 Ypseudotuberculosis_PB1_2294332_2329455 5 10945 1 11007 10941 11007 99.16 10945 11010 99.96 99.97 Ypestis_CO92_2342939_2353883 Ypseudotuberculosis_PB1_2329629_2340638 45 8990 1 8945 8946 8945 99.89 10235 44607 87.41 20.05 Ypestis_CO92_2354001_2364235 Ypseudotuberculosis_PB1_2340809_2385415 116 30476 8915 39304 30361 30390 99.49 35754 44607 84.92 68.13 Ypestis_CO92_2404569_2440322 Ypseudotuberculosis_PB1_2340809_2385415 30432 35754 39305 44607 5323 5303 99.38 35754 44607 14.89 11.89 Ypestis_CO92_2404569_2440322 Ypseudotuberculosis_PB1_2340809_2385415 5 209 1 205 205 205 100.00 209 22441 98.09 0.91 Ypestis_CO92_2440851_2441059 Ypseudotuberculosis_PB1_2385924_2408364 1 7818 200 8026 7818 7827 99.82 7818 22441 100.00 34.88 Ypestis_CO92_2442377_2450194 Ypseudotuberculosis_PB1_2385924_2408364 1 3760 8033 11792 3760 3760 99.68 14148 22441 26.58 16.76 Ypestis_CO92_2452160_2466307 Ypseudotuberculosis_PB1_2385924_2408364 3746 14148 12030 22441 10403 10412 99.64 14148 22441 73.53 46.40 Ypestis_CO92_2452160_2466307 Ypseudotuberculosis_PB1_2385924_2408364 1 3692 1 3720 3692 3720 98.18 3692 91283 100.00 4.08 Ypestis_CO92_2466482_2470173 Ypseudotuberculosis_PB1_2408539_2499821 1 48969 3716 52708 48969 48993 99.41 116867 91283 41.90 53.67 Ypestis_CO92_2471492_2588358 Ypseudotuberculosis_PB1_2408539_2499821 48801 54645 52657 58501 5845 5845 99.50 116867 91283 5.00 6.40 Ypestis_CO92_2471492_2588358 Ypseudotuberculosis_PB1_2408539_2499821 54645 69670 58590 73669 15026 15080 99.05 116867 91283 12.86 16.52 Ypestis_CO92_2471492_2588358 Ypseudotuberculosis_PB1_2408539_2499821 70437 82502 78899 90921 12066 12023 99.30 116867 91283 10.32 13.17 Ypestis_CO92_2471492_2588358 Ypseudotuberculosis_PB1_2408539_2499821 91391 91801 6223 6633 411 411 98.06 116867 40027 0.35 1.03 Ypestis_CO92_2471492_2588358 Ypseudotuberculosis_PB1_2505165_2545191 91801 94153 9423 11775 2353 2353 99.87 116867 40027 2.01 5.88 Ypestis_CO92_2471492_2588358 Ypseudotuberculosis_PB1_2505165_2545191 94153 96684 16146 18677 2532 2532 99.68 116867 40027 2.17 6.33 Ypestis_CO92_2471492_2588358 Ypseudotuberculosis_PB1_2505165_2545191 96676 106489 19481 29309 9814 9829 99.45 116867 40027 8.40 24.56 Ypestis_CO92_2471492_2588358 Ypseudotuberculosis_PB1_2505165_2545191 106500 108600 29581 31681 2101 2101 99.43 116867 40027 1.80 5.25 Ypestis_CO92_2471492_2588358 Ypseudotuberculosis_PB1_2505165_2545191 108584 116867 31710 40027 8284 8318 99.13 116867 40027 7.09 20.78 Ypestis_CO92_2471492_2588358 Ypseudotuberculosis_PB1_2505165_2545191 1 25895 275 26187 25895 25913 99.12 25895 63452 100.00 40.84 Ypestis_CO92_247683_273577 Ypseudotuberculosis_PB1_363928_427379 18 10575 1 10541 10558 10541 99.55 10575 14971 99.84 70.41 Ypestis_CO92_2588531_2599105 Ypseudotuberculosis_PB1_2545382_2560352 1 4420 10551 14971 4420 4421 99.62 4420 14971 100.00 29.53 Ypestis_CO92_2599826_2604245 Ypseudotuberculosis_PB1_2545382_2560352 1 1910 1 1910 1910 1910 99.58 32667 66430 5.85 2.88 Ypestis_CO92_2604424_2637090 Ypseudotuberculosis_PB1_2560531_2626960 1894 32667 1948 32771 30774 30824 99.56 32667 66430 94.21 46.40 Ypestis_CO92_2604424_2637090 Ypseudotuberculosis_PB1_2560531_2626960 1 8418 32791 41210 8418 8420 99.73 8418 66430 100.00 12.67 Ypestis_CO92_2637821_2646238 Ypseudotuberculosis_PB1_2560531_2626960 1 11056 41229 52304 11056 11076 99.42 11056 66430 100.00 16.67 Ypestis_CO92_2646967_2658022 Ypseudotuberculosis_PB1_2560531_2626960 1 4179 52307 56485 4179 4179 99.86 17657 66430 23.67 6.29 Ypestis_CO92_2659984_2677640 Ypseudotuberculosis_PB1_2560531_2626960 7727 17657 56486 66430 9931 9945 99.59 17657 66430 56.24 14.97 Ypestis_CO92_2659984_2677640 Ypseudotuberculosis_PB1_2560531_2626960 1 12565 6853 19422 12565 12570 99.86 12565 25458 100.00 49.38 Ypestis_CO92_26702_39266 Ypseudotuberculosis_PB1_13770_39227 1 10961 1 10944 10961 10944 99.39 10961 10944 100.00 100.00 Ypestis_CO92_2677816_2688776 Ypseudotuberculosis_PB1_2627136_2638079 1 2565 228 2791 2565 2564 99.96 2565 172105 100.00 1.49 Ypestis_CO92_2688988_2691552 Ypseudotuberculosis_PB1_2638291_2810395 1 373 2828 3200 373 373 100.00 373 172105 100.00 0.22 Ypestis_CO92_2692300_2692672 Ypseudotuberculosis_PB1_2638291_2810395 1 13471 3206 16677 13471 13472 99.52 50889 172105 26.47 7.83 Ypestis_CO92_2694637_2745525 Ypseudotuberculosis_PB1_2638291_2810395 13473 50889 16769 54222 37417 37454 99.64 50889 172105 73.53 21.76 Ypestis_CO92_2694637_2745525 Ypseudotuberculosis_PB1_2638291_2810395 1 26642 26174 52826 26642 26653 99.67 26642 63452 100.00 42.00 Ypestis_CO92_273751_300392 Ypseudotuberculosis_PB1_363928_427379 1 1874 16583 18456 1874 1874 99.89 38065 18456 4.92 10.15 Ypestis_CO92_2746842_2784906 Ypseudotuberculosis_PB1_2830281_2848736 1870 6203 2 4304 4334 4303 99.15 38065 48666 11.39 8.84 Ypestis_CO92_2746842_2784906 Ypseudotuberculosis_PB1_2850054_2898719 6202 16883 16786 27466 10682 10681 99.13 38065 48666 28.06 21.95 Ypestis_CO92_2746842_2784906 Ypseudotuberculosis_PB1_2850054_2898719 17195 17409 27778 27992 215 215 99.07 38065 48666 0.56 0.44 Ypestis_CO92_2746842_2784906 Ypseudotuberculosis_PB1_2850054_2898719 17829 22962 28160 33236 5134 5077 95.79 38065 48666 13.49 10.43 Ypestis_CO92_2746842_2784906 Ypseudotuberculosis_PB1_2850054_2898719 22633 38065 32967 48375 15433 15409 98.85 38065 48666 40.54 31.66 Ypestis_CO92_2746842_2784906 Ypseudotuberculosis_PB1_2850054_2898719 1637 2020 999 1382 384 384 88.54 2022 2622 18.99 14.65 Ypestis_CO92_2785155_2787176 Ypseudotuberculosis_PB1_4048426_4051047 1 2229 1 2229 2229 2229 99.87 2229 2810 100.00 79.32 Ypestis_CO92_2788505_2790733 Ypseudotuberculosis_PB1_2899467_2902276 1 12504 1 12508 12504 12508 99.13 12504 12508 100.00 100.00 Ypestis_CO92_2792062_2804565 Ypseudotuberculosis_PB1_2903024_2915531 1 2341 1 2340 2341 2340 98.89 21426 21726 10.93 10.77 Ypestis_CO92_2804747_2826172 Ypseudotuberculosis_PB1_2915714_2937439 2339 8828 2464 8949 6490 6486 98.52 21426 21726 30.29 29.85 Ypestis_CO92_2804747_2826172 Ypseudotuberculosis_PB1_2915714_2937439 10173 21426 10386 21621 11254 11236 98.97 21426 21726 52.52 51.72 Ypestis_CO92_2804747_2826172 Ypseudotuberculosis_PB1_2915714_2937439 1 101 21626 21726 101 101 99.01 104 21726 97.12 0.46 Ypestis_CO92_2828136_2828239 Ypseudotuberculosis_PB1_2915714_2937439 2 2241 1 2258 2240 2258 98.10 2241 2259 99.96 99.96 Ypestis_CO92_2828410_2830650 Ypseudotuberculosis_PB1_2937612_2939870 1 15478 1 15544 15478 15544 98.89 15478 15544 100.00 100.00 Ypestis_CO92_2830827_2846304 Ypseudotuberculosis_PB1_2940046_2955589 1 4736 1 4752 4736 4752 98.70 4736 4752 100.00 100.00 Ypestis_CO92_2846479_2851214 Ypseudotuberculosis_PB1_2955764_2960515 1 2636 1 2623 2636 2623 97.84 31878 32389 8.27 8.10 Ypestis_CO92_2851392_2883269 Ypseudotuberculosis_PB1_2960693_2993081 3500 23620 3570 23714 20121 20145 99.16 31878 32389 63.12 62.20 Ypestis_CO92_2851392_2883269 Ypseudotuberculosis_PB1_2960693_2993081 23638 31878 24102 32386 8241 8285 98.97 31878 32389 25.85 25.58 Ypestis_CO92_2851392_2883269 Ypseudotuberculosis_PB1_2960693_2993081 1 2323 1 2323 2323 2323 99.70 2323 27494 100.00 8.45 Ypestis_CO92_2883444_2885766 Ypseudotuberculosis_PB1_2993253_3020746 1 7261 8427 15689 7261 7263 99.05 59013 66488 12.30 10.92 Ypestis_CO92_2887092_2946104 Ypseudotuberculosis_PB1_1251062_1317549 8132 8219 15752 15839 88 88 96.59 59013 66488 0.15 0.13 Ypestis_CO92_2887092_2946104 Ypseudotuberculosis_PB1_1251062_1317549 8433 59013 15810 66488 50581 50679 98.96 59013 66488 85.71 76.22 Ypestis_CO92_2887092_2946104 Ypseudotuberculosis_PB1_1251062_1317549 102 219 1 118 118 118 100.00 219 118 53.88 100.00 Ypestis_CO92_2946191_2946409 Ypseudotuberculosis_PB1_1317895_1318012 1 9050 1 9049 9050 9049 99.56 9050 23450 100.00 38.59 Ypestis_CO92_2946496_2955545 Ypseudotuberculosis_PB1_1318099_1341548 1 12588 9068 21686 12588 12619 99.41 12588 23450 100.00 53.81 Ypestis_CO92_2956274_2968861 Ypseudotuberculosis_PB1_1318099_1341548 1 763 764 2 763 763 99.87 763 10219 100.00 7.47 Ypestis_CO92_2970824_2971586 Ypseudotuberculosis_PB1_3408810_3419028 1 10518 64799 54280 10518 10520 99.72 10518 64800 100.00 16.23 Ypestis_CO92_2971759_2982276 Ypseudotuberculosis_PB1_3343840_3408639 1 13957 54287 40323 13957 13965 98.95 53742 64800 25.97 21.55 Ypestis_CO92_2983592_3037333 Ypseudotuberculosis_PB1_3343840_3408639 13936 29942 40157 24164 16007 15994 99.37 53742 64800 29.78 24.68 Ypestis_CO92_2983592_3037333 Ypseudotuberculosis_PB1_3343840_3408639 29774 53741 24048 1 23968 24048 99.37 53742 64800 44.60 37.11 Ypestis_CO92_2983592_3037333 Ypseudotuberculosis_PB1_3343840_3408639 1 10599 52855 63452 10599 10598 99.74 10599 63452 100.00 16.70 Ypestis_CO92_301132_311730 Ypseudotuberculosis_PB1_363928_427379 1 11422 22538 11117 11422 11422 99.92 11424 22539 99.98 50.68 Ypestis_CO92_3037508_3048931 Ypseudotuberculosis_PB1_3321127_3343665 1 7130 7195 66 7130 7130 99.27 7130 45641 100.00 15.62 Ypestis_CO92_3050897_3058026 Ypseudotuberculosis_PB1_3054277_3099917 1 13116 22788 9577 13116 13212 99.13 22673 22884 57.85 57.73 Ypestis_CO92_3068468_3091140 Ypseudotuberculosis_PB1_3020928_3043811 13172 19090 9625 3724 5919 5902 99.49 22673 22884 26.11 25.79 Ypestis_CO92_3068468_3091140 Ypseudotuberculosis_PB1_3020928_3043811 18962 22672 3711 1 3711 3711 99.62 22673 22884 16.37 16.22 Ypestis_CO92_3068468_3091140 Ypseudotuberculosis_PB1_3020928_3043811 1 6979 27493 20557 6979 6937 98.94 6979 27494 100.00 25.23 Ypestis_CO92_3091322_3098300 Ypseudotuberculosis_PB1_2993253_3020746 1 15619 20540 4900 15619 15641 99.41 18226 27494 85.70 56.89 Ypestis_CO92_3099028_3117253 Ypseudotuberculosis_PB1_2993253_3020746 15619 18226 4936 2329 2608 2608 99.85 18226 27494 14.31 9.49 Ypestis_CO92_3099028_3117253 Ypseudotuberculosis_PB1_2993253_3020746 1 8429 8430 2 8429 8429 99.43 8429 66488 100.00 12.68 Ypestis_CO92_3118577_3127005 Ypseudotuberculosis_PB1_1251062_1317549 1 146 1 146 146 146 100.00 146 22482 100.00 0.65 Ypestis_CO92_311911_312056 Ypseudotuberculosis_PB1_427560_450041 2 1285 40638 39371 1284 1268 98.68 1285 40638 99.92 3.12 Ypestis_CO92_3127176_3128460 Ypseudotuberculosis_PB1_1210254_1250891 1 10642 37472 26873 10642 10600 98.83 10642 40638 100.00 26.08 Ypestis_CO92_3129779_3140420 Ypseudotuberculosis_PB1_1210254_1250891 23 8070 2306 10371 8048 8066 99.39 34568 22482 23.28 35.88 Ypestis_CO92_314185_348752 Ypseudotuberculosis_PB1_427560_450041 8032 20146 10368 22482 12115 12115 99.68 34568 22482 35.05 53.89 Ypestis_CO92_314185_348752 Ypseudotuberculosis_PB1_427560_450041 20145 20282 5 142 138 138 97.83 34568 147 0.40 93.88 Ypestis_CO92_314185_348752 Ypseudotuberculosis_PB1_450160_450306 20282 34568 1 14282 14287 14282 99.06 34568 14282 41.33 100.00 Ypestis_CO92_314185_348752 Ypseudotuberculosis_PB1_450425_464706 1 10711 26866 16144 10711 10723 99.52 10711 40638 100.00 26.39 Ypestis_CO92_3142386_3153096 Ypseudotuberculosis_PB1_1210254_1250891 1 944 44278 45221 944 944 99.79 44403 120673 2.13 0.78 Ypestis_CO92_3153820_3198222 Ypseudotuberculosis_PB1_3170442_3291114 909 13908 45224 58213 13000 12990 99.51 44403 120673 29.28 10.76 Ypestis_CO92_3153820_3198222 Ypseudotuberculosis_PB1_3170442_3291114 13897 44403 58255 88833 30507 30579 99.02 44403 120673 68.70 25.34 Ypestis_CO92_3153820_3198222 Ypseudotuberculosis_PB1_3170442_3291114 1 2972 88850 91821 2972 2972 96.17 2972 120673 100.00 2.46 Ypestis_CO92_3199543_3202514 Ypseudotuberculosis_PB1_3170442_3291114 1 20045 91985 112173 20045 20189 98.17 28467 120673 70.41 16.73 Ypestis_CO92_3203392_3231858 Ypseudotuberculosis_PB1_3170442_3291114 20252 22242 112341 114326 1991 1986 86.57 28467 120673 6.99 1.65 Ypestis_CO92_3203392_3231858 Ypseudotuberculosis_PB1_3170442_3291114 22231 24617 114585 116972 2387 2388 97.36 28467 120673 8.39 1.98 Ypestis_CO92_3203392_3231858 Ypseudotuberculosis_PB1_3170442_3291114 22566 25661 114920 118014 3096 3095 94.65 28467 120673 10.88 2.56 Ypestis_CO92_3203392_3231858 Ypseudotuberculosis_PB1_3170442_3291114 25855 26658 118208 119023 804 816 90.34 28467 120673 2.82 0.68 Ypestis_CO92_3203392_3231858 Ypseudotuberculosis_PB1_3170442_3291114 26677 28467 118880 120673 1791 1794 96.55 28467 120673 6.29 1.49 Ypestis_CO92_3203392_3231858 Ypseudotuberculosis_PB1_3170442_3291114 1 10585 1 10567 10585 10567 99.50 10585 29659 100.00 35.63 Ypestis_CO92_3232040_3242624 Ypseudotuberculosis_PB1_3291296_3320954 1 16282 10586 26893 16282 16308 99.47 16282 29659 100.00 54.99 Ypestis_CO92_3243353_3259634 Ypseudotuberculosis_PB1_3291296_3320954 1 2739 26916 29659 2739 2744 99.31 2739 29659 100.00 9.25 Ypestis_CO92_3260368_3263106 Ypseudotuberculosis_PB1_3291296_3320954 1 9803 1 9821 9803 9821 99.39 9803 22539 100.00 43.57 Ypestis_CO92_3263279_3273081 Ypseudotuberculosis_PB1_3321127_3343665 1 1265 9841 11105 1265 1265 99.68 1265 22539 100.00 5.61 Ypestis_CO92_3273811_3275075 Ypseudotuberculosis_PB1_3321127_3343665 1 7455 7205 14667 7455 7463 98.24 7455 45641 100.00 16.35 Ypestis_CO92_3277047_3284501 Ypseudotuberculosis_PB1_3054277_3099917 1 30949 14663 45641 30949 30979 98.12 30949 45641 100.00 67.88 Ypestis_CO92_3285820_3316768 Ypseudotuberculosis_PB1_3054277_3099917 1 3245 1 3243 3245 3243 98.86 15485 15247 20.96 21.27 Ypestis_CO92_3317135_3332619 Ypseudotuberculosis_PB1_3100284_3115530 3450 15135 3556 15247 11686 11692 99.15 15485 15247 75.47 76.68 Ypestis_CO92_3317135_3332619 Ypseudotuberculosis_PB1_3100284_3115530 15139 15412 1 274 274 274 99.64 15485 587 1.77 46.68 Ypestis_CO92_3317135_3332619 Ypseudotuberculosis_PB1_3115717_3116303 15311 15483 415 587 173 173 98.84 15485 587 1.12 29.47 Ypestis_CO92_3317135_3332619 Ypseudotuberculosis_PB1_3115717_3116303 1 198 1 198 198 198 100.00 198 198 100.00 100.00 Ypestis_CO92_3332698_3332895 Ypseudotuberculosis_PB1_3116384_3116581 1 159 1 159 159 159 100.00 159 159 100.00 100.00 Ypestis_CO92_3332969_3333127 Ypseudotuberculosis_PB1_3116655_3116813 1 1716 1 1716 1716 1716 99.77 1716 1923 100.00 89.24 Ypestis_CO92_3333201_3334916 Ypseudotuberculosis_PB1_3116887_3118809 1 171 1753 1923 171 171 100.00 171 1923 100.00 8.89 Ypestis_CO92_3335663_3335833 Ypseudotuberculosis_PB1_3116887_3118809 1 79 1 79 79 79 100.00 79 79 100.00 100.00 Ypestis_CO92_3335908_3335986 Ypseudotuberculosis_PB1_3118884_3118962 1 9925 1 9923 9925 9923 99.67 9925 23951 100.00 41.43 Ypestis_CO92_3336061_3345985 Ypseudotuberculosis_PB1_3119037_3142987 1 13907 9963 23939 13907 13977 99.13 13907 23951 100.00 58.36 Ypestis_CO92_3346736_3360642 Ypseudotuberculosis_PB1_3119037_3142987 1 23214 1 23324 23214 23324 98.30 56675 23324 40.96 100.00 Ypestis_CO92_3360821_3417495 Ypseudotuberculosis_PB1_3143166_3166489 23728 25739 1 2011 2012 2011 99.16 56675 120673 3.55 1.67 Ypestis_CO92_3360821_3417495 Ypseudotuberculosis_PB1_3170442_3291114 25661 28303 2073 4723 2643 2651 98.42 56675 120673 4.66 2.20 Ypestis_CO92_3360821_3417495 Ypseudotuberculosis_PB1_3170442_3291114 28251 56675 4794 33221 28425 28428 99.58 56675 120673 50.15 23.56 Ypestis_CO92_3360821_3417495 Ypseudotuberculosis_PB1_3170442_3291114 1 9462 33255 42716 9462 9462 99.68 9462 120673 100.00 7.84 Ypestis_CO92_3418239_3427700 Ypseudotuberculosis_PB1_3170442_3291114 1 12421 16129 3689 12421 12441 98.97 16020 40638 77.53 30.61 Ypestis_CO92_3428428_3444447 Ypseudotuberculosis_PB1_1210254_1250891 12424 16019 3596 1 3596 3596 99.83 16020 40638 22.45 8.85 Ypestis_CO92_3428428_3444447 Ypseudotuberculosis_PB1_1210254_1250891 1 1670 1670 1 1670 1670 99.76 1675 1674 99.70 99.76 Ypestis_CO92_3444856_3446530 Ypseudotuberculosis_PB1_1208299_1209972 1 8282 170926 162646 8282 8281 99.76 35788 170927 23.14 4.84 Ypestis_CO92_3446698_3482485 Ypseudotuberculosis_PB1_1037201_1208127 18178 20282 152341 150237 2105 2105 97.53 35788 170927 5.88 1.23 Ypestis_CO92_3446698_3482485 Ypseudotuberculosis_PB1_1037201_1208127 20282 35788 150120 134617 15507 15504 99.65 35788 170927 43.33 9.07 Ypestis_CO92_3446698_3482485 Ypseudotuberculosis_PB1_1037201_1208127 1 57250 134598 77257 57250 57342 99.47 57250 170927 100.00 33.55 Ypestis_CO92_3484461_3541710 Ypseudotuberculosis_PB1_1037201_1208127 1 17982 1 17982 17982 17982 99.71 17982 29450 100.00 61.06 Ypestis_CO92_348854_366835 Ypseudotuberculosis_PB1_464808_494257 1 6098 77239 71141 6098 6099 99.82 6098 170927 100.00 3.57 Ypestis_CO92_3542438_3548535 Ypseudotuberculosis_PB1_1037201_1208127 1 7371 71129 63739 7371 7391 99.59 7371 170927 100.00 4.32 Ypestis_CO92_3549258_3556628 Ypseudotuberculosis_PB1_1037201_1208127 1 17047 63705 46645 17047 17061 99.34 17048 170927 99.99 9.98 Ypestis_CO92_3557374_3574421 Ypseudotuberculosis_PB1_1037201_1208127 1 525 46648 46133 525 516 94.00 46786 170927 1.12 0.30 Ypestis_CO92_3576376_3623161 Ypseudotuberculosis_PB1_1037201_1208127 298 46785 46484 1 46488 46484 99.30 46786 170927 99.36 27.20 Ypestis_CO92_3576376_3623161 Ypseudotuberculosis_PB1_1037201_1208127 1 206 30320 30115 206 206 87.38 1916 30321 10.75 0.68 Ypestis_CO92_3623340_3625255 Ypseudotuberculosis_PB1_1006702_1037022 137 1916 23425 21673 1780 1753 97.75 1916 30321 92.90 5.78 Ypestis_CO92_3623340_3625255 Ypseudotuberculosis_PB1_1006702_1037022 1 21681 21674 3 21681 21672 99.61 21682 30321 100.00 71.48 Ypestis_CO92_3627214_3648895 Ypseudotuberculosis_PB1_1006702_1037022 1 6302 7609 1308 6302 6302 99.81 6302 7610 100.00 82.81 Ypestis_CO92_3654610_3660911 Ypseudotuberculosis_PB1_993313_1000922 1 1053 1295 243 1053 1053 99.81 1053 7610 100.00 13.84 Ypestis_CO92_3661634_3662686 Ypseudotuberculosis_PB1_993313_1000922 1 236 236 1 236 236 100.00 6528 7610 3.62 3.10 Ypestis_CO92_3664652_3671179 Ypseudotuberculosis_PB1_993313_1000922 235 6528 16171 9876 6294 6296 99.51 6528 16173 96.42 38.93 Ypestis_CO92_3664652_3671179 Ypseudotuberculosis_PB1_975185_991357 1 6009 9853 3845 6009 6009 99.72 6009 16173 100.00 37.15 Ypestis_CO92_3671912_3677920 Ypseudotuberculosis_PB1_975185_991357 1 4868 18000 22867 4868 4868 99.75 11327 29450 42.98 16.53 Ypestis_CO92_367563_378889 Ypseudotuberculosis_PB1_464808_494257 4817 11327 22940 29450 6511 6511 99.49 11327 29450 57.48 22.11 Ypestis_CO92_367563_378889 Ypseudotuberculosis_PB1_464808_494257 1 3574 3828 255 3574 3574 99.80 3574 16173 100.00 22.10 Ypestis_CO92_3678648_3682221 Ypseudotuberculosis_PB1_975185_991357 1 4232 4217 1 4232 4217 99.46 31259 4218 13.54 99.98 Ypestis_CO92_3682816_3714074 Ypseudotuberculosis_PB1_970597_974814 4294 31259 69400 42480 26966 26921 99.19 31259 69400 86.27 38.79 Ypestis_CO92_3682816_3714074 Ypseudotuberculosis_PB1_900395_969794 1 3654 42467 38814 3654 3654 99.64 42415 69400 8.61 5.27 Ypestis_CO92_3714798_3757212 Ypseudotuberculosis_PB1_900395_969794 3655 3779 22931 22807 125 125 91.20 42415 29450 0.29 0.42 Ypestis_CO92_3714798_3757212 Ypseudotuberculosis_PB1_464808_494257 3748 26308 38842 16249 22561 22594 99.35 42415 69400 53.19 32.56 Ypestis_CO92_3714798_3757212 Ypseudotuberculosis_PB1_900395_969794 26207 42414 16274 1 16208 16274 98.84 42415 69400 38.21 23.45 Ypestis_CO92_3714798_3757212 Ypseudotuberculosis_PB1_900395_969794 1 5128 74974 69803 5128 5172 98.72 58820 74975 8.72 6.90 Ypestis_CO92_3757394_3816213 Ypseudotuberculosis_PB1_825239_900213 5233 36147 69855 39018 30915 30838 99.07 58820 74975 52.56 41.13 Ypestis_CO92_3757394_3816213 Ypseudotuberculosis_PB1_825239_900213 36106 48701 39017 26370 12596 12648 98.73 58820 74975 21.41 16.87 Ypestis_CO92_3757394_3816213 Ypseudotuberculosis_PB1_825239_900213 48701 58820 26216 16104 10120 10113 99.35 58820 74975 17.21 13.49 Ypestis_CO92_3757394_3816213 Ypseudotuberculosis_PB1_825239_900213 1 206 1 206 206 206 100.00 206 206 100.00 100.00 Ypestis_CO92_379230_379435 Ypseudotuberculosis_PB1_494599_494804 5 18904 1 18924 18900 18924 99.74 18904 18924 99.98 100.00 Ypestis_CO92_379513_398416 Ypseudotuberculosis_PB1_495196_514119 1 2804 16087 13284 2804 2804 99.93 19377 74975 14.47 3.74 Ypestis_CO92_3816941_3836317 Ypseudotuberculosis_PB1_825239_900213 2797 16083 13246 1 13287 13246 99.33 19377 74975 68.57 17.67 Ypestis_CO92_3816941_3836317 Ypseudotuberculosis_PB1_825239_900213 16077 19377 3327 5 3301 3323 99.25 19377 3327 17.04 99.88 Ypestis_CO92_3816941_3836317 Ypseudotuberculosis_PB1_820596_823922 3209 4397 9752 8564 1189 1189 94.95 4397 43651 27.04 2.72 Ypestis_CO92_3838873_3843269 Ypseudotuberculosis_PB1_613123_656773 1 8339 8339 1 8339 8339 99.59 8340 43651 99.99 19.10 Ypestis_CO92_3843494_3851833 Ypseudotuberculosis_PB1_613123_656773 1 2730 2685 1 2730 2685 97.47 2731 2686 99.96 99.96 Ypestis_CO92_3852243_3854973 Ypseudotuberculosis_PB1_610176_612861 1 28109 28170 1 28109 28170 99.33 38991 28171 72.09 100.00 Ypestis_CO92_3855157_3894147 Ypseudotuberculosis_PB1_581822_609992 28237 38991 10754 3 10755 10752 99.61 38991 10754 27.58 99.98 Ypestis_CO92_3855157_3894147 Ypseudotuberculosis_PB1_570941_581694 1 6504 13259 6759 6504 6501 99.88 6504 13263 100.00 49.02 Ypestis_CO92_3894321_3900824 Ypseudotuberculosis_PB1_557511_570773 1 6720 6744 1 6720 6744 99.58 6721 13263 99.99 50.85 Ypestis_CO92_3902283_3909003 Ypseudotuberculosis_PB1_557511_570773 1 18235 18235 1 18235 18235 99.80 18236 18236 99.99 99.99 Ypestis_CO92_3909083_3927318 Ypseudotuberculosis_PB1_539196_557431 1 12801 12825 1 12801 12825 99.65 19623 12826 65.23 99.99 Ypestis_CO92_3927503_3947125 Ypseudotuberculosis_PB1_526186_539011 1 2908 40494 43402 2908 2909 99.24 2908 140295 100.00 2.07 Ypestis_CO92_3952336_3955243 Ypseudotuberculosis_PB1_4053484_4193778 1 17325 43815 61165 17325 17351 99.40 24428 140295 70.92 12.37 Ypestis_CO92_3955769_3980196 Ypseudotuberculosis_PB1_4053484_4193778 17340 24428 61339 68427 7089 7089 99.86 24428 140295 29.02 5.05 Ypestis_CO92_3955769_3980196 Ypseudotuberculosis_PB1_4053484_4193778 1 9077 68442 77539 9077 9098 99.62 17837 140295 50.89 6.48 Ypestis_CO92_3980922_3998758 Ypseudotuberculosis_PB1_4053484_4193778 8887 17837 77489 86441 8951 8953 99.33 17837 140295 50.18 6.38 Ypestis_CO92_3980922_3998758 Ypseudotuberculosis_PB1_4053484_4193778 1 1807 1 1807 1807 1807 99.78 2447 1807 73.85 100.00 Ypestis_CO92_398596_401042 Ypseudotuberculosis_PB1_514299_516105 1 16150 17370 1220 16150 16151 99.46 16150 54319 100.00 29.73 Ypestis_CO92_4000980_4017129 Ypseudotuberculosis_PB1_4244211_4298529 1 4982 5870 853 4982 5018 98.72 17494 6543 28.48 76.69 Ypestis_CO92_4028209_4045702 Ypseudotuberculosis_PB1_4237480_4244022 6239 17493 11261 1 11255 11261 98.93 17494 11305 64.34 99.61 Ypestis_CO92_4028209_4045702 Ypseudotuberculosis_PB1_4225987_4237291 1 17001 18506 1548 17001 16959 98.74 18415 18507 92.32 91.64 Ypestis_CO92_4045871_4064285 Ypseudotuberculosis_PB1_4207312_4225818 16978 18415 1526 89 1438 1438 99.51 18415 18507 7.81 7.77 Ypestis_CO92_4045871_4064285 Ypseudotuberculosis_PB1_4207312_4225818 1 67 67 1 67 67 100.00 7540 18507 0.89 0.36 Ypestis_CO92_4065017_4072556 Ypseudotuberculosis_PB1_4207312_4225818 774 7539 6806 1 6766 6806 99.06 7540 6806 89.73 100.00 Ypestis_CO92_4065017_4072556 Ypseudotuberculosis_PB1_4199328_4206133 1 4759 4759 1 4759 4759 99.66 4760 4760 99.98 99.98 Ypestis_CO92_4072924_4077683 Ypseudotuberculosis_PB1_4194201_4198960 1 21533 140294 118764 21533 21531 98.94 21536 140295 99.99 15.35 Ypestis_CO92_4077982_4099517 Ypseudotuberculosis_PB1_4053484_4193778 59 8290 116697 108498 8232 8200 93.73 30437 140295 27.05 5.84 Ypestis_CO92_4104320_4134756 Ypseudotuberculosis_PB1_4053484_4193778 8883 22779 107920 94016 13897 13905 98.35 30437 140295 45.66 9.91 Ypestis_CO92_4104320_4134756 Ypseudotuberculosis_PB1_4053484_4193778 22904 30437 94016 86445 7534 7572 99.26 30437 140295 24.75 5.40 Ypestis_CO92_4104320_4134756 Ypseudotuberculosis_PB1_4053484_4193778 9986 24823 12926 27754 14838 14829 98.89 24877 43651 59.65 33.97 Ypestis_CO92_412199_437075 Ypseudotuberculosis_PB1_613123_656773 1 6034 19426 25458 6034 6033 99.54 6034 25458 100.00 23.70 Ypestis_CO92_41229_47262 Ypseudotuberculosis_PB1_13770_39227 1 31856 17369 49252 31856 31884 99.42 31856 54319 100.00 58.70 Ypestis_CO92_4137900_4169755 Ypseudotuberculosis_PB1_4244211_4298529 1 5078 49242 54319 5078 5078 99.68 5328 54319 95.31 9.35 Ypestis_CO92_4169928_4175255 Ypseudotuberculosis_PB1_4244211_4298529 5210 5328 1 119 119 119 100.00 5328 119 2.23 100.00 Ypestis_CO92_4169928_4175255 Ypseudotuberculosis_PB1_4298661_4298779 153 15849 29910 14154 15697 15757 99.08 15849 29910 99.04 52.68 Ypestis_CO92_4180675_4196523 Ypseudotuberculosis_PB1_324731_354640 1 14138 14138 1 14138 14138 99.90 14139 29910 99.99 47.27 Ypestis_CO92_4197250_4211388 Ypseudotuberculosis_PB1_324731_354640 1 393 4525 4133 393 393 99.75 393 4526 100.00 8.68 Ypestis_CO92_4211566_4211958 Ypseudotuberculosis_PB1_320028_324553 1 4128 4128 1 4128 4128 99.90 4129 4526 99.98 91.21 Ypestis_CO92_4213922_4218050 Ypseudotuberculosis_PB1_320028_324553 1 2511 92635 90125 2511 2511 99.96 2511 92636 100.00 2.71 Ypestis_CO92_4223772_4226282 Ypseudotuberculosis_PB1_221670_314305 1 9776 90107 80332 9776 9776 99.91 9778 92636 99.98 10.55 Ypestis_CO92_4227010_4236787 Ypseudotuberculosis_PB1_221670_314305 1 7971 80321 72351 7971 7971 99.77 37551 92636 21.23 8.60 Ypestis_CO92_4238755_4276305 Ypseudotuberculosis_PB1_221670_314305 7835 17549 72222 62510 9715 9713 99.47 37551 92636 25.87 10.49 Ypestis_CO92_4238755_4276305 Ypseudotuberculosis_PB1_221670_314305 17783 37551 60402 40633 19769 19770 98.26 37551 92636 52.65 21.34 Ypestis_CO92_4238755_4276305 Ypseudotuberculosis_PB1_221670_314305 1 39288 40599 1338 39288 39262 99.25 39360 92636 99.82 42.38 Ypestis_CO92_4277050_4316409 Ypseudotuberculosis_PB1_221670_314305 31 7229 7935 737 7199 7199 99.40 7229 8408 99.58 85.62 Ypestis_CO92_4316580_4323808 Ypseudotuberculosis_PB1_211940_220347 1 699 714 1 699 714 97.48 700 8408 99.86 8.49 Ypestis_CO92_4324540_4325239 Ypseudotuberculosis_PB1_211940_220347 1 72 72 1 72 72 100.00 75 73 96.00 98.63 Ypestis_CO92_4325324_4325398 Ypseudotuberculosis_PB1_211783_211855 4 1914 1911 1 1911 1911 99.84 24977 1911 7.65 100.00 Ypestis_CO92_4325485_4350461 Ypseudotuberculosis_PB1_209780_211690 2042 24976 58917 35883 22935 23035 99.19 24977 58917 91.82 39.10 Ypestis_CO92_4325485_4350461 Ypseudotuberculosis_PB1_150736_209652 1 6980 35887 28884 6980 7004 99.40 15007 58917 46.51 11.89 Ypestis_CO92_4351779_4366785 Ypseudotuberculosis_PB1_150736_209652 6980 7614 27386 26746 635 641 95.33 15007 58917 4.23 1.09 Ypestis_CO92_4351779_4366785 Ypseudotuberculosis_PB1_150736_209652 8015 14300 24684 18371 6286 6314 99.37 15007 58917 41.89 10.72 Ypestis_CO92_4351779_4366785 Ypseudotuberculosis_PB1_150736_209652 14300 15007 18412 17705 708 708 100.00 15007 58917 4.72 1.20 Ypestis_CO92_4351779_4366785 Ypseudotuberculosis_PB1_150736_209652 1 9476 16550 7074 9476 9477 99.61 16422 58917 57.70 16.09 Ypestis_CO92_4367999_4384420 Ypseudotuberculosis_PB1_150736_209652 9268 16421 7159 1 7154 7159 99.80 16422 58917 43.56 12.15 Ypestis_CO92_4367999_4384420 Ypseudotuberculosis_PB1_150736_209652 168 10120 33699 43651 9953 9953 99.42 10120 43651 98.35 22.80 Ypestis_CO92_437242_447361 Ypseudotuberculosis_PB1_613123_656773 1 1244 27154 25905 1244 1250 96.48 27237 27155 4.57 4.60 Ypestis_CO92_4390194_4417430 Ypseudotuberculosis_PB1_117806_144960 2257 27138 24901 1 24882 24901 99.32 27237 27155 91.35 91.70 Ypestis_CO92_4390194_4417430 Ypseudotuberculosis_PB1_117806_144960 27027 27236 211 1 210 211 93.36 27237 3159 0.77 6.68 Ypestis_CO92_4390194_4417430 Ypseudotuberculosis_PB1_9296_12454 1 2079 45 2127 2079 2083 98.80 49160 20915 4.23 9.96 Ypestis_CO92_4419199_4468358 Ypseudotuberculosis_PB1_4419381_4440295 2072 16986 2213 17080 14915 14868 97.76 49160 20915 30.34 71.09 Ypestis_CO92_4419199_4468358 Ypseudotuberculosis_PB1_4419381_4440295 17264 20385 17355 20476 3122 3122 94.04 49160 20915 6.35 14.93 Ypestis_CO92_4419199_4468358 Ypseudotuberculosis_PB1_4419381_4440295 20268 20647 2845 3224 380 380 92.11 49160 3407 0.77 11.15 Ypestis_CO92_4419199_4468358 Ypseudotuberculosis_PB1_4440378_4443784 21573 26251 88 4768 4679 4681 94.69 49160 9496 9.52 49.29 Ypestis_CO92_4419199_4468358 Ypseudotuberculosis_PB1_4443867_4453362 26458 27420 5672 6634 963 963 96.16 49160 9496 1.96 10.14 Ypestis_CO92_4419199_4468358 Ypseudotuberculosis_PB1_4443867_4453362 27794 30258 6986 9407 2465 2422 95.56 49160 9496 5.01 25.51 Ypestis_CO92_4419199_4468358 Ypseudotuberculosis_PB1_4443867_4453362 30992 36908 950 6867 5917 5918 99.16 49160 86121 12.04 6.87 Ypestis_CO92_4419199_4468358 Ypseudotuberculosis_PB1_4454182_4540302 37020 46075 6868 15923 9056 9056 99.34 49160 86121 18.42 10.52 Ypestis_CO92_4419199_4468358 Ypseudotuberculosis_PB1_4454182_4540302 46049 49160 34277 37388 3112 3112 99.10 49160 86121 6.33 3.61 Ypestis_CO92_4419199_4468358 Ypseudotuberculosis_PB1_4454182_4540302 1 10367 37425 47789 10367 10365 98.33 48573 86121 21.34 12.04 Ypestis_CO92_4469105_4517677 Ypseudotuberculosis_PB1_4454182_4540302 10352 14557 47854 52058 4206 4205 97.91 48573 86121 8.66 4.88 Ypestis_CO92_4469105_4517677 Ypseudotuberculosis_PB1_4454182_4540302 14439 14918 52522 53001 480 480 93.96 48573 86121 0.99 0.56 Ypestis_CO92_4469105_4517677 Ypseudotuberculosis_PB1_4454182_4540302 15262 48573 52780 86121 33312 33342 98.41 48573 86121 68.58 38.72 Ypestis_CO92_4469105_4517677 Ypseudotuberculosis_PB1_4454182_4540302 1 7471 1 7471 7471 7471 99.20 7639 7509 97.80 99.49 Ypestis_CO92_447448_455086 Ypseudotuberculosis_PB1_657225_664733 7565 7639 7435 7509 75 75 98.67 7639 7509 0.98 1.00 Ypestis_CO92_447448_455086 Ypseudotuberculosis_PB1_657225_664733 1 2278 1 2278 2278 2278 98.95 2278 28950 100.00 7.87 Ypestis_CO92_4517763_4520040 Ypseudotuberculosis_PB1_4540388_4569337 1 11720 2283 13982 11720 11700 98.98 41971 28950 27.92 40.41 Ypestis_CO92_4522004_4563974 Ypseudotuberculosis_PB1_4540388_4569337 12363 19937 13982 21556 7575 7575 99.82 41971 28950 18.05 26.17 Ypestis_CO92_4522004_4563974 Ypseudotuberculosis_PB1_4540388_4569337 25619 25986 22511 22886 368 376 95.26 41971 28950 0.88 1.30 Ypestis_CO92_4522004_4563974 Ypseudotuberculosis_PB1_4540388_4569337 25965 41951 12107 28068 15987 15962 99.73 41971 28136 38.09 56.73 Ypestis_CO92_4522004_4563974 Ypseudotuberculosis_PB1_4571292_4599427 1 54344 1 54478 54344 54478 98.88 54344 100087 100.00 54.43 Ypestis_CO92_455256_509599 Ypseudotuberculosis_PB1_664903_764989 1 2932 228 3159 2932 2932 99.83 24106 3159 12.16 92.81 Ypestis_CO92_4565717_4589822 Ypseudotuberculosis_PB1_9296_12454 2925 24105 21209 1 21181 21209 99.48 24106 21383 87.87 99.19 Ypestis_CO92_4565717_4589822 Ypseudotuberculosis_PB1_4622491_4643873 1 1002 986 1 1002 986 98.10 1003 987 99.90 99.90 Ypestis_CO92_4589995_4590997 Ypseudotuberculosis_PB1_4621332_4622318 1 17029 20256 3180 17029 17077 99.03 19454 20256 87.53 84.31 Ypestis_CO92_4591174_4610627 Ypseudotuberculosis_PB1_4600899_4621154 17024 19442 2499 81 2419 2419 99.67 19454 20256 12.43 11.94 Ypestis_CO92_4591174_4610627 Ypseudotuberculosis_PB1_4600899_4621154 1 7329 7329 1 7329 7329 99.80 16839 7560 43.52 96.94 Ypestis_CO92_4612401_4629239 Ypseudotuberculosis_PB1_1_7560 7330 16838 9537 1 9509 9537 99.42 16839 9537 56.47 100.00 Ypestis_CO92_4612401_4629239 Ypseudotuberculosis_PB1_4686083_4695620 1 24318 36133 11819 24318 24315 99.81 24318 36134 100.00 67.29 Ypestis_CO92_4629411_4653729 Ypseudotuberculosis_PB1_4649778_4685911 2 8896 1 8896 8895 8896 99.74 55907 78228 15.91 11.37 Ypestis_CO92_47430_103336 Ypseudotuberculosis_PB1_39396_117623 8881 25658 8999 25776 16778 16778 99.85 55907 78228 30.01 21.45 Ypestis_CO92_47430_103336 Ypseudotuberculosis_PB1_39396_117623 25650 52842 25844 53055 27193 27212 99.57 55907 78228 48.64 34.79 Ypestis_CO92_47430_103336 Ypseudotuberculosis_PB1_39396_117623 52831 55907 54000 57092 3077 3093 99.35 55907 78228 5.50 3.95 Ypestis_CO92_47430_103336 Ypseudotuberculosis_PB1_39396_117623 4 9167 54531 63688 9164 9158 98.59 9167 100087 99.97 9.15 Ypestis_CO92_510474_519640 Ypseudotuberculosis_PB1_664903_764989 3 36358 63711 100087 36356 36377 99.46 36358 100087 99.99 36.35 Ypestis_CO92_520372_556729 Ypseudotuberculosis_PB1_664903_764989 1 10478 1 10478 10478 10478 99.64 12900 31220 81.22 33.56 Ypestis_CO92_556903_569802 Ypseudotuberculosis_PB1_765163_796382 10885 12900 13016 15031 2016 2016 99.90 12900 31220 15.63 6.46 Ypestis_CO92_556903_569802 Ypseudotuberculosis_PB1_765163_796382 1 111 15246 15356 111 111 99.10 120 31220 92.50 0.36 Ypestis_CO92_569893_570012 Ypseudotuberculosis_PB1_765163_796382 6 1080 15320 16393 1075 1074 98.98 1080 31220 99.54 3.44 Ypestis_CO92_570103_571182 Ypseudotuberculosis_PB1_765163_796382 1 5222 16397 21637 5222 5241 99.29 5222 31220 100.00 16.79 Ypestis_CO92_573145_578366 Ypseudotuberculosis_PB1_765163_796382 1 7180 21671 28866 7180 7196 99.60 7180 31220 100.00 23.05 Ypestis_CO92_579111_586290 Ypseudotuberculosis_PB1_765163_796382 1 2320 28884 31220 2320 2337 99.06 2324 31220 99.83 7.49 Ypestis_CO92_587019_589342 Ypseudotuberculosis_PB1_765163_796382 1 22612 1 22612 22612 22612 99.80 22612 22612 100.00 100.00 Ypestis_CO92_589517_612128 Ypseudotuberculosis_PB1_796561_819172 1 519 1 519 519 519 100.00 519 530 100.00 97.92 Ypestis_CO92_612313_612831 Ypseudotuberculosis_PB1_819357_819886 1 13127 40492 27365 13127 13128 99.86 13127 140295 100.00 9.36 Ypestis_CO92_614926_628052 Ypseudotuberculosis_PB1_4053484_4193778 1 25622 27326 1726 25622 25601 98.75 25622 140295 100.00 18.25 Ypestis_CO92_628801_654422 Ypseudotuberculosis_PB1_4053484_4193778 1 936 936 1 936 936 98.08 5269 140295 17.76 0.67 Ypestis_CO92_655212_660480 Ypseudotuberculosis_PB1_4053484_4193778 1 31140 34923 3752 31140 31172 99.47 32446 37174 95.97 83.85 Ypestis_CO92_661265_693710 Ypseudotuberculosis_PB1_4003190_4040363 31129 32446 3718 2402 1318 1317 98.86 32446 37174 4.06 3.54 Ypestis_CO92_661265_693710 Ypseudotuberculosis_PB1_4003190_4040363 46 1916 1871 1 1871 1871 99.47 1917 37174 97.60 5.03 Ypestis_CO92_696161_698077 Ypseudotuberculosis_PB1_4003190_4040363 1 790 47511 46726 790 786 97.85 18762 47512 4.21 1.65 Ypestis_CO92_698196_716957 Ypseudotuberculosis_PB1_3955560_4003071 742 18762 18050 7 18021 18044 99.69 18762 47512 96.05 37.98 Ypestis_CO92_698196_716957 Ypseudotuberculosis_PB1_3955560_4003071 1 2861 83129 80285 2861 2845 98.92 2861 83130 100.00 3.42 Ypestis_CO92_717138_719998 Ypseudotuberculosis_PB1_3872257_3955386 1 36384 80162 43767 36384 36396 99.27 36384 83130 100.00 43.78 Ypestis_CO92_720367_756750 Ypseudotuberculosis_PB1_3872257_3955386 1 8486 36564 28081 8486 8484 98.29 27096 83130 31.32 10.21 Ypestis_CO92_758198_785293 Ypseudotuberculosis_PB1_3872257_3955386 8440 21661 28082 14842 13222 13241 99.43 27096 83130 48.80 15.93 Ypestis_CO92_758198_785293 Ypseudotuberculosis_PB1_3872257_3955386 21649 23231 14800 13207 1583 1594 96.24 27096 83130 5.84 1.92 Ypestis_CO92_758198_785293 Ypseudotuberculosis_PB1_3872257_3955386 23141 27096 13221 9263 3956 3959 98.51 27096 83130 14.60 4.76 Ypestis_CO92_758198_785293 Ypseudotuberculosis_PB1_3872257_3955386 1 9264 9245 1 9264 9245 97.31 10261 83130 90.28 11.12 Ypestis_CO92_786022_796282 Ypseudotuberculosis_PB1_3872257_3955386 2 9712 9732 122 9711 9611 95.11 9894 9735 98.15 98.73 Ypestis_CO92_799805_809698 Ypseudotuberculosis_PB1_3859750_3869484 9663 9893 233 1 231 233 95.28 9894 9735 2.33 2.39 Ypestis_CO92_799805_809698 Ypseudotuberculosis_PB1_3859750_3869484 1 5566 20629 26203 5566 5575 98.96 45696 28465 12.18 19.59 Ypestis_CO92_811233_856928 Ypseudotuberculosis_PB1_3746018_3774482 8800 16233 1 7448 7434 7448 98.46 45696 48485 16.27 15.36 Ypestis_CO92_811233_856928 Ypseudotuberculosis_PB1_3783097_3831581 14072 23578 9713 19269 9507 9557 98.50 45696 48485 20.80 19.71 Ypestis_CO92_811233_856928 Ypseudotuberculosis_PB1_3783097_3831581 23559 34215 19288 29911 10657 10624 98.91 45696 48485 23.32 21.91 Ypestis_CO92_811233_856928 Ypseudotuberculosis_PB1_3783097_3831581 34352 45696 29913 41292 11345 11380 97.87 45696 48485 24.83 23.47 Ypestis_CO92_811233_856928 Ypseudotuberculosis_PB1_3783097_3831581 1 8152 16917 25119 8152 8203 98.60 8152 64009 100.00 12.82 Ypestis_CO92_858892_867043 Ypseudotuberculosis_PB1_3476458_3540466 1 38732 25286 64009 38732 38724 99.40 38756 64009 99.94 60.50 Ypestis_CO92_867210_905965 Ypseudotuberculosis_PB1_3476458_3540466 20 11894 40 11914 11875 11875 99.64 23662 11914 50.19 99.67 Ypestis_CO92_908805_932466 Ypseudotuberculosis_PB1_3540661_3552574 11881 23662 1 11764 11782 11764 99.30 23662 37312 49.79 31.53 Ypestis_CO92_908805_932466 Ypseudotuberculosis_PB1_3552748_3590059 1 25501 11760 37312 25501 25553 99.20 25501 37312 100.00 68.48 Ypestis_CO92_932652_958152 Ypseudotuberculosis_PB1_3552748_3590059 1 786 1 786 786 786 99.87 32565 62326 2.41 1.26 Ypestis_CO92_958518_991082 Ypseudotuberculosis_PB1_3590425_3652750 1207 4975 1204 4974 3769 3771 99.76 32565 62326 11.57 6.05 Ypestis_CO92_958518_991082 Ypseudotuberculosis_PB1_3590425_3652750 4975 11533 5080 11638 6559 6559 99.54 32565 62326 20.14 10.52 Ypestis_CO92_958518_991082 Ypseudotuberculosis_PB1_3590425_3652750 11512 32565 41234 62322 21054 21089 99.50 32565 62326 64.65 33.84 Ypestis_CO92_958518_991082 Ypseudotuberculosis_PB1_3590425_3652750 1 11690 1 11632 11690 11632 99.15 11690 11632 100.00 100.00 Ypestis_CO92_991255_1002944 Ypseudotuberculosis_PB1_3652919_3664550